Jatropha Genome Database

JcCB0897851.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0897851.10 + phase: 0 /pseudo/partial
         (117 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G18525.1 | Symbols:  | ATP binding / protein kinase/ protein ...    85   8e-18

>AT5G18525.1 | Symbols:  | ATP binding / protein kinase/ protein
            serine/threonine kinase/ protein tyrosine kinase |
            chr5:6146932-6153658 REVERSE
          Length = 1639

 Score = 85.1 bits (209), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 39/64 (60%), Positives = 49/64 (76%)

Query: 1    MNKPEPVQSWSALALIDCLSTLDGLVSFLPREMVVKELIEGKSCLHVAVLMQTNLEIPVL 60
            M KPEPV SW +LAL DCL TLDGLV+ +  E+++ EL +G+ CLHV VLMQ NLE+ VL
Sbjct: 1010 MKKPEPVHSWCSLALSDCLITLDGLVALISDELLIHELTKGRLCLHVRVLMQKNLELRVL 1069

Query: 61   QFVS 64
            QF +
Sbjct: 1070 QFAA 1073