Jatropha Genome Database

JcCB0897541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0897541.10 + phase: 2 /pseudo/partial
         (423 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G58610.2 | Symbols:  | ketol-acid reductoisomerase | chr3:216...   676   0.0  
AT3G58610.1 | Symbols:  | ketol-acid reductoisomerase | chr3:216...   676   0.0  

>AT3G58610.2 | Symbols:  | ketol-acid reductoisomerase |
           chr3:21671561-21674639 FORWARD
          Length = 591

 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/384 (84%), Positives = 345/384 (89%)

Query: 40  SKAVLLLQIGLRKGSRSFAEARAAGFTEESGTLGDIWETIAGSDLVLLLISDAAQADNYE 99
           +K+ ++++IGLRKGSRSF EARAAGFTEESGTLGDIWETIAGSDLVLLLISDAAQADNYE
Sbjct: 145 AKSDIVVKIGLRKGSRSFEEARAAGFTEESGTLGDIWETIAGSDLVLLLISDAAQADNYE 204

Query: 100 KIFSHMKPNSIXXXXXXXXXXXXXXXXXDFPKNISVIAVCPKGMGPSVRRLYVQGKEING 159
           KIFSHMKPNSI                 DFPKNISV+AVCPKGMGPSVRRLYVQGKEING
Sbjct: 205 KIFSHMKPNSILGLSHGFLLGHLQSSGLDFPKNISVVAVCPKGMGPSVRRLYVQGKEING 264

Query: 160 AGINSSFAVHQDVDGRAADVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGV 219
           AGIN+SFAVHQDVDGRAADVALGWSVALGSPFTFATTLEQEY+SDIFGERGILLGAVHG+
Sbjct: 265 AGINASFAVHQDVDGRAADVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGI 324

Query: 220 VECLFRRYTENGMNEDVAYKNTVEXXXXXXXXXXXXXXMLAVYNSLSDEGKRDFETAYSA 279
           VE LFRRYTENGM+ED+AYKNTVE              MLAVYNSLS+EGK+DFETAYSA
Sbjct: 325 VESLFRRYTENGMSEDLAYKNTVECITGTISRTISTQGMLAVYNSLSEEGKKDFETAYSA 384

Query: 280 AYYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRA 339
           ++YPCM+ILYECYEDV SGSEIRSVVLAGRRFYEKEGLPAFPMG IDQTRMWKVGERVR 
Sbjct: 385 SFYPCMEILYECYEDVQSGSEIRSVVLAGRRFYEKEGLPAFPMGNIDQTRMWKVGERVRK 444

Query: 340 TRPKDDLGPLYPFTAGVFVALMMAQIEVLRKKGHSYSEIINESLIEAVDSLNPFMHARGV 399
           +RP  DLGPLYPFTAGV+VALMMAQIE+LRKKGHSYSEIINES+IE+VDSLNPFMHARGV
Sbjct: 445 SRPAGDLGPLYPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGV 504

Query: 400 SFMVDNCSTTARLGSRKWAPRFDY 423
           SFMVDNCSTTARLGSRKWAPRFDY
Sbjct: 505 SFMVDNCSTTARLGSRKWAPRFDY 528


>AT3G58610.1 | Symbols:  | ketol-acid reductoisomerase |
           chr3:21671561-21674639 FORWARD
          Length = 591

 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/384 (84%), Positives = 345/384 (89%)

Query: 40  SKAVLLLQIGLRKGSRSFAEARAAGFTEESGTLGDIWETIAGSDLVLLLISDAAQADNYE 99
           +K+ ++++IGLRKGSRSF EARAAGFTEESGTLGDIWETIAGSDLVLLLISDAAQADNYE
Sbjct: 145 AKSDIVVKIGLRKGSRSFEEARAAGFTEESGTLGDIWETIAGSDLVLLLISDAAQADNYE 204

Query: 100 KIFSHMKPNSIXXXXXXXXXXXXXXXXXDFPKNISVIAVCPKGMGPSVRRLYVQGKEING 159
           KIFSHMKPNSI                 DFPKNISV+AVCPKGMGPSVRRLYVQGKEING
Sbjct: 205 KIFSHMKPNSILGLSHGFLLGHLQSSGLDFPKNISVVAVCPKGMGPSVRRLYVQGKEING 264

Query: 160 AGINSSFAVHQDVDGRAADVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGV 219
           AGIN+SFAVHQDVDGRAADVALGWSVALGSPFTFATTLEQEY+SDIFGERGILLGAVHG+
Sbjct: 265 AGINASFAVHQDVDGRAADVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGI 324

Query: 220 VECLFRRYTENGMNEDVAYKNTVEXXXXXXXXXXXXXXMLAVYNSLSDEGKRDFETAYSA 279
           VE LFRRYTENGM+ED+AYKNTVE              MLAVYNSLS+EGK+DFETAYSA
Sbjct: 325 VESLFRRYTENGMSEDLAYKNTVECITGTISRTISTQGMLAVYNSLSEEGKKDFETAYSA 384

Query: 280 AYYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRA 339
           ++YPCM+ILYECYEDV SGSEIRSVVLAGRRFYEKEGLPAFPMG IDQTRMWKVGERVR 
Sbjct: 385 SFYPCMEILYECYEDVQSGSEIRSVVLAGRRFYEKEGLPAFPMGNIDQTRMWKVGERVRK 444

Query: 340 TRPKDDLGPLYPFTAGVFVALMMAQIEVLRKKGHSYSEIINESLIEAVDSLNPFMHARGV 399
           +RP  DLGPLYPFTAGV+VALMMAQIE+LRKKGHSYSEIINES+IE+VDSLNPFMHARGV
Sbjct: 445 SRPAGDLGPLYPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGV 504

Query: 400 SFMVDNCSTTARLGSRKWAPRFDY 423
           SFMVDNCSTTARLGSRKWAPRFDY
Sbjct: 505 SFMVDNCSTTARLGSRKWAPRFDY 528