Jatropha Genome Database

JcCB0868471.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0868471.10 - phase: 0 /partial
         (104 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ATMG01080.1 | Symbols: ATP9 | subunit 9 of mitochondrial F0-ATPa...    62   8e-11
AT2G07671.1 | Symbols:  | H+-transporting two-sector ATPase, C s...    62   8e-11

>ATMG01080.1 | Symbols: ATP9 | subunit 9 of mitochondrial
          F0-ATPase | chrM:278895-279152 FORWARD
          Length = 85

 Score = 62.0 bits (149), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 30/32 (93%), Positives = 31/32 (96%)

Query: 56 SVFSSLIHSVARNPSLAKQLFGYAILGFALTE 87
          +VFSSLIHSVARNPSLAKQ FGYAILGFALTE
Sbjct: 37 NVFSSLIHSVARNPSLAKQSFGYAILGFALTE 68


>AT2G07671.1 | Symbols:  | H+-transporting two-sector ATPase, C
          subunit family protein | chr2:3251856-3252113 REVERSE
          Length = 85

 Score = 62.0 bits (149), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 30/32 (93%), Positives = 31/32 (96%)

Query: 56 SVFSSLIHSVARNPSLAKQLFGYAILGFALTE 87
          +VFSSLIHSVARNPSLAKQ FGYAILGFALTE
Sbjct: 37 NVFSSLIHSVARNPSLAKQSFGYAILGFALTE 68