Jatropha Genome Database

JcCB0836821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0836821.10 + phase: 0 
         (115 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G42210.2 | Symbols: ATOEP16-3, OEP16-3 | mitochondrial import...   147   1e-36
AT2G42210.4 | Symbols: ATOEP16-3, OEP16-3 | mitochondrial import...   147   2e-36
AT2G42210.3 | Symbols: ATOEP16-3, OEP16-3 | mitochondrial import...   147   2e-36
AT2G42210.1 | Symbols: ATOEP16-3, OEP16-3 | mitochondrial import...   147   2e-36

>AT2G42210.2 | Symbols: ATOEP16-3, OEP16-3 | mitochondrial import
           inner membrane translocase subunit Tim17/Tim22/Tim23
           family protein | chr2:17590600-17591591 FORWARD
          Length = 173

 Score =  147 bits (370), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 69/110 (62%), Positives = 87/110 (79%)

Query: 1   MDPSEIRYLEDDDTPIKKTIKGATMGLVAGTIWGTVVATWYDVPRVEKHVALPGLIRTVK 60
           MDP+E+RYLE++D P+ KTIKG+  G  AGTI+GT++ATW DVPRVE++VALPGLIRT+K
Sbjct: 15  MDPAEMRYLEEEDGPLMKTIKGSITGFGAGTIYGTILATWKDVPRVERNVALPGLIRTLK 74

Query: 61  MMGNYGATFAAIGGVYIGVEQLVQHYRMKRDXXXXXXXXXXXXXSILGFK 110
           MMG +G TFAAIGGVYIGVEQLVQ++R KRD             S+LG++
Sbjct: 75  MMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVAGASVLGYR 124


>AT2G42210.4 | Symbols: ATOEP16-3, OEP16-3 | mitochondrial import
           inner membrane translocase subunit Tim17/Tim22/Tim23
           family protein | chr2:17590642-17591591 FORWARD
          Length = 159

 Score =  147 bits (370), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 69/110 (62%), Positives = 87/110 (79%)

Query: 1   MDPSEIRYLEDDDTPIKKTIKGATMGLVAGTIWGTVVATWYDVPRVEKHVALPGLIRTVK 60
           MDP+E+RYLE++D P+ KTIKG+  G  AGTI+GT++ATW DVPRVE++VALPGLIRT+K
Sbjct: 1   MDPAEMRYLEEEDGPLMKTIKGSITGFGAGTIYGTILATWKDVPRVERNVALPGLIRTLK 60

Query: 61  MMGNYGATFAAIGGVYIGVEQLVQHYRMKRDXXXXXXXXXXXXXSILGFK 110
           MMG +G TFAAIGGVYIGVEQLVQ++R KRD             S+LG++
Sbjct: 61  MMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVAGASVLGYR 110


>AT2G42210.3 | Symbols: ATOEP16-3, OEP16-3 | mitochondrial import
           inner membrane translocase subunit Tim17/Tim22/Tim23
           family protein | chr2:17590642-17591591 FORWARD
          Length = 159

 Score =  147 bits (370), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 69/110 (62%), Positives = 87/110 (79%)

Query: 1   MDPSEIRYLEDDDTPIKKTIKGATMGLVAGTIWGTVVATWYDVPRVEKHVALPGLIRTVK 60
           MDP+E+RYLE++D P+ KTIKG+  G  AGTI+GT++ATW DVPRVE++VALPGLIRT+K
Sbjct: 1   MDPAEMRYLEEEDGPLMKTIKGSITGFGAGTIYGTILATWKDVPRVERNVALPGLIRTLK 60

Query: 61  MMGNYGATFAAIGGVYIGVEQLVQHYRMKRDXXXXXXXXXXXXXSILGFK 110
           MMG +G TFAAIGGVYIGVEQLVQ++R KRD             S+LG++
Sbjct: 61  MMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVAGASVLGYR 110


>AT2G42210.1 | Symbols: ATOEP16-3, OEP16-3 | mitochondrial import
           inner membrane translocase subunit Tim17/Tim22/Tim23
           family protein | chr2:17590642-17591591 FORWARD
          Length = 159

 Score =  147 bits (370), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 69/110 (62%), Positives = 87/110 (79%)

Query: 1   MDPSEIRYLEDDDTPIKKTIKGATMGLVAGTIWGTVVATWYDVPRVEKHVALPGLIRTVK 60
           MDP+E+RYLE++D P+ KTIKG+  G  AGTI+GT++ATW DVPRVE++VALPGLIRT+K
Sbjct: 1   MDPAEMRYLEEEDGPLMKTIKGSITGFGAGTIYGTILATWKDVPRVERNVALPGLIRTLK 60

Query: 61  MMGNYGATFAAIGGVYIGVEQLVQHYRMKRDXXXXXXXXXXXXXSILGFK 110
           MMG +G TFAAIGGVYIGVEQLVQ++R KRD             S+LG++
Sbjct: 61  MMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVAGASVLGYR 110