Jatropha Genome Database

JcCB0836121.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0836121.10 + phase: 1 /partial
         (65 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G62810.1 | Symbols: PEX14, ATPEX14, PED2 | PEX14; protein bin...    45   6e-06

>AT5G62810.1 | Symbols: PEX14, ATPEX14, PED2 | PEX14; protein
          binding / protein transporter | chr5:25220323-25223571
          FORWARD
          Length = 507

 Score = 45.4 bits (106), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 5/52 (9%)

Query: 2  ELAQPTNEIQQPAREEATKQSPP-SVFVNSEPMREDQVQNAVKISFTPKKLG 52
          E  +P NE+QQ        Q PP SVF NSEP+REDQ+QNA+K    P+  G
Sbjct: 25 EATKPANEVQQ----ATIAQDPPTSVFKNSEPIREDQIQNAIKFLSHPRVRG 72