Jatropha Genome Database

JcCB0833551.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0833551.10 - phase: 0 /pseudo/partial
         (174 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G10370.1 | Symbols: SDP6 | SDP6 (SUGAR-DEPENDENT 6); glycerol...   150   3e-37

>AT3G10370.1 | Symbols: SDP6 | SDP6 (SUGAR-DEPENDENT 6);
           glycerol-3-phosphate dehydrogenase |
           chr3:3216502-3219027 FORWARD
          Length = 629

 Score =  150 bits (380), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 70/86 (81%), Positives = 78/86 (90%)

Query: 48  MAEDAVDAAVKSGKLSPTNECSTQNLRLIGGDGWEPSSFTVLAQQYVRMKRSYGGKVVPG 107
           MAEDAVDAA+KSG+L PTNEC TQ L+L+G  GWEPSSFT LAQQYVRMK++YGGKVVPG
Sbjct: 445 MAEDAVDAAIKSGQLKPTNECVTQKLQLLGSYGWEPSSFTTLAQQYVRMKKTYGGKVVPG 504

Query: 108 VMDTAAAKHLSHAYGTMAERVAAIAQ 133
            MDTAAAKHLSHAYG+MA+RVA IAQ
Sbjct: 505 AMDTAAAKHLSHAYGSMADRVATIAQ 530