Jatropha Genome Database
- JcCB0819751.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0819751.10 + phase: 0 /partial
(486 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 587 e-168
AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 137 2e-32
AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arr... 132 4e-31
AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745)... 125 6e-29
AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 6e-29
AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 1e-28
AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 8e-28
AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 3e-27
AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 4e-27
AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 119 5e-27
AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transfer... 119 5e-27
AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 7e-27
AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 7e-27
AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 7e-27
AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 118 1e-26
AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025)... 118 1e-26
AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 117 1e-26
AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 3e-26
AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 5e-26
AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 5e-26
AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 115 7e-26
AT4G19900.1 | Symbols: | glycosyl transferase-related | chr4:10... 114 1e-25
AT1G12700.1 | Symbols: | helicase domain-containing protein / p... 114 2e-25
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 4e-25
AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 5e-25
AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 6e-25
AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 6e-25
AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 8e-25
AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 9e-25
AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 1e-24
AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknow... 110 2e-24
AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 4e-24
AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures; EXPR... 109 4e-24
AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 5e-24
AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-106727... 108 6e-24
AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 9e-24
AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 1e-23
AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 1e-23
AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 2e-23
AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 3e-23
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 4e-23
AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 5e-23
AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 5e-23
AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknow... 105 6e-23
AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 1e-22
AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 1e-22
AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 1e-22
AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 1e-22
AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 4e-22
AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 8e-22
AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR) DO... 101 8e-22
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 9e-22
AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3... 101 1e-21
AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 1e-21
AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknow... 100 2e-21
AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 4e-21
AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 6e-21
AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures; EXP... 99 8e-21
AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 99 9e-21
AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 9e-21
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 98 1e-20
AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 2e-20
AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 3e-20
AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 3e-20
AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 5e-20
AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 7e-20
AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknow... 96 7e-20
AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 8e-20
AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 9e-20
AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 1e-19
AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 3e-19
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 4e-19
AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 4e-19
AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 5e-19
AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 6e-19
AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 9e-19
AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 3e-18
AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript proce... 90 3e-18
AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 90 3e-18
AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 89 6e-18
AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 7e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 7e-18
AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 7e-18
AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 9e-18
AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures; EXPR... 87 2e-17
AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 3e-17
AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 5e-17
AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 86 5e-17
AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 6e-17
AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G71210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 2e-16
AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 84 2e-16
AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 3e-16
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 83 3e-16
AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 4e-16
AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 5e-16
AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270)... 82 5e-16
AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006)... 82 9e-16
AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 1e-15
AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 81 2e-15
AT1G05600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 3e-15
AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 5e-15
AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 2e-14
AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 3e-14
AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 4e-14
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 5e-14
AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 76 5e-14
AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 76 6e-14
AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 7e-14
AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654)... 75 9e-14
AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT5G60960.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 74 3e-13
AT1G11630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 4e-13
AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknow... 73 4e-13
AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat... 73 4e-13
AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 6e-13
AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 9e-13
AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 71 2e-12
AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 2e-12
AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY ... 70 2e-12
AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217)... 70 4e-12
AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 69 7e-12
AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 1e-11
AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT5G61370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT1G80150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 4e-11
AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453)... 66 6e-11
AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 6e-11
AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 7e-11
AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL F... 64 2e-10
AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);... 64 3e-10
AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 4e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 7e-10
AT4G38150.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT4G38150.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 60 3e-09
AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 60 4e-09
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 5e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 59 5e-09
AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) | ... 59 6e-09
AT5G15280.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Pentatrico... 58 1e-08
AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknow... 57 4e-08
AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-08
AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 9e-08
AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 9e-08
AT3G02490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G03560.2 | Symbols: | nucleobase:cation symporter | chr5:901... 55 1e-07
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 1e-07
AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G30610.1 | Symbols: emb2279 | emb2279 (embryo defective 2279)... 54 2e-07
AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:... 54 2e-07
AT5G67570.1 | Symbols: DG1, EMB1408 | DG1 (DELAYED GREENING 1) |... 54 3e-07
AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076)... 54 3e-07
AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-07
AT4G04790.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 5e-07
AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 6e-07
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 7e-07
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 8e-07
AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-07
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-07
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-07
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT2G40240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750)... 51 2e-06
AT1G26500.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-06
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-06
AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknow... 50 4e-06
AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reductio... 49 5e-06
AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-06
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 7e-06
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 9e-06
AT4G21880.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 9e-06
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 9e-06
>AT1G06710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2057279-2060119 REVERSE
Length = 946
Score = 587 bits (1514), Expect = e-168, Method: Compositional matrix adjust.
Identities = 285/448 (63%), Positives = 349/448 (77%), Gaps = 19/448 (4%)
Query: 51 EGLFDPEDPMSLDNSRMESISSKEFSFLRDSLLESKFDTG------------KRSNDAVL 98
+ +F +DP S +SR +KE+SFL DSL+ D G + S DA
Sbjct: 7 DDMFGFDDPFSPSDSREVVDLTKEYSFLHDSLV----DYGNVNVHQVVPIITQSSIDARA 62
Query: 99 ISNAILNNDDGFGSKTQKFLRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSH 158
I++A+ DD FG K+QKFLRQFREKLSESLV EVL L+ P I FF+WAGRQIGY H
Sbjct: 63 IADAVSGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKH 122
Query: 159 TQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAAL 218
T VYNAL+++I + ++++PE+FL++I+D+DKEV G+ LNVL+RK+C+NG ++ AL
Sbjct: 123 TAPVYNALVDLIV---RDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIAL 179
Query: 219 EELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSL 278
EELGRLKDF ++ SR TYN L+ FL+A++LD+A L+HREMS MD FTL CFA+SL
Sbjct: 180 EELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSL 239
Query: 279 CKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTY 338
CK GKWR+ALTL+E E FVPDT+ YTK+ISGLCEASLFEEAMDFLNRMRA SC+PNVVTY
Sbjct: 240 CKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTY 299
Query: 339 RILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVK 398
LLCGCL KKQLGRCKR+L++M+MEGC+PSP IFNSLVHAYC S D+SYAYKLLKKMVK
Sbjct: 300 STLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK 359
Query: 399 CGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCG 458
CG PGYVVYNILIG ICG++D + D+L+LAE AYSEML GVVLNK+NVS+F RCLC
Sbjct: 360 CGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCS 419
Query: 459 VGKFEKAFNVIREMMSKGFIPDIGTYSK 486
GK+EKAF+VIREM+ +GFIPD TYSK
Sbjct: 420 AGKYEKAFSVIREMIGQGFIPDTSTYSK 447
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 148/341 (43%), Gaps = 54/341 (15%)
Query: 199 KLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF------LRAEKLDTA 252
K+ N L+ YC +G + A + L ++ G+ + YN L+ L + LD A
Sbjct: 332 KIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLA 391
Query: 253 YLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISG 309
+ EM G ++ + F LC AGK+ A ++I + + F+PDT Y+K+++
Sbjct: 392 EKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNY 451
Query: 310 LCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPS 369
LC AS E A M+ + +V TY I++ + + + ++ + M GC P+
Sbjct: 452 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 511
Query: 370 PGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG--------------- 414
+ +L+HAY +++ SYA +L + M+ GC P V Y+ LI G
Sbjct: 512 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 571
Query: 415 -ICGNEDLPSMDV-----------------------------LELAETAYSEMLEVGVVL 444
+CG++D+P +D+ +E A M G
Sbjct: 572 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 631
Query: 445 NKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
N++ LC VGK ++A V EM GF + TYS
Sbjct: 632 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 672
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 133/304 (43%), Gaps = 29/304 (9%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
+++ +C+ GL A + +++ G + +TY AL+ +L+A+K+ A + M +
Sbjct: 481 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 540
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTK------------- 305
G + T CKAG+ A + E+ + VPD +Y K
Sbjct: 541 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVT 600
Query: 306 ---MISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMI 362
++ G C++ EEA L+ M C PN + Y L+ G + +L + + + M
Sbjct: 601 YGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 660
Query: 363 MEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC--GNED 420
G + ++SL+ Y + + A K+L KM++ C P V+Y +I G+C G D
Sbjct: 661 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 720
Query: 421 LPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
+ ++++ E E G N V + +GK E ++ M SKG P+
Sbjct: 721 -EAYKLMQMME-------EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPN 772
Query: 481 IGTY 484
TY
Sbjct: 773 YVTY 776
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 128/287 (44%), Gaps = 11/287 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
+ LI C+ G + A E + + G+ A+ TY++L+ + + ++ D A V +M
Sbjct: 637 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE 696
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
+ + LCK GK +A + ++E++ P+ + YT MI G E
Sbjct: 697 NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIET 756
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
++ L RM + PN VTYR+L+ C + L +L M + ++
Sbjct: 757 CLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIE 816
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLP-SMDVLELAETAYSEM 437
+ ++++ + LL ++ + P VY +LI + + L ++ +LE T + +
Sbjct: 817 GF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 874
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
++ N + S LC K E AF + EM KG IP++ ++
Sbjct: 875 VDYSSTYNSLIES-----LCLANKVETAFQLFSEMTKKGVIPEMQSF 916
>AT3G22670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8017771-8019459 REVERSE
Length = 562
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 191/419 (45%), Gaps = 43/419 (10%)
Query: 104 LNNDDGFGSKTQKFLRQFREKLSESLVAEVLNLVKNP-ELGIKFFIWAGRQIGYSHTQAV 162
LN D K L + ++ESLV +VL N FFIWA Q GY H+
Sbjct: 109 LNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHT 168
Query: 163 YNALLEMIESTNNNSNDRIPEQFLREIK--DEDKEVLGKLLNVLIRKYCQNGLWNAALEE 220
YNA+++++ N + + + E+ +E K V ++ ++R+ ++G +N A++
Sbjct: 169 YNAMVDVLGKCRNFD---LMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDA 225
Query: 221 LGRL-KDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLC 279
+ K +G K + N+L+ ++ ++ A+ V ++ + D+ T H C
Sbjct: 226 FLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFC 284
Query: 280 KAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVV 336
KA K+ DA + L++ EF PD + YT + C+ F + L MR N C PNVV
Sbjct: 285 KARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVV 344
Query: 337 TYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKM 396
TY I++ + KQ+ + M +GC P ++SL+H ++ + A ++ + M
Sbjct: 345 TYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM 404
Query: 397 VKCGCQPGYVVYNILI-GGICGNEDLPSMDVLELAE-----------TAYSEMLE----- 439
G + +VYN +I + + D ++ +L+ E Y+ +L+
Sbjct: 405 TNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHK 464
Query: 440 -----VGVVLNK-------VNVSNF---ARCLCGVGKFEKAFNVIREMMSKGFIPDIGT 483
+G++L+ ++VS + R LC GK E+A E + KG +P T
Sbjct: 465 KKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDST 523
>AT3G53700.1 | Symbols: MEE40 | MEE40 (maternal effect embryo arrest
40) | chr3:19900303-19902567 FORWARD
Length = 754
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 150/320 (46%), Gaps = 33/320 (10%)
Query: 199 KLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
K +++ Y + G + AL ++ +FG S ++ N +V F + +++ A +E
Sbjct: 225 KTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284
Query: 259 MSNL-GYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEAS 314
MSN G+ D +T + LCKAG + A+ +++ +E + PD Y +ISGLC+
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Query: 315 LFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFN 374
+EA++ L++M C PN VTY L+ ++ Q+ + ++ +G P FN
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 375 SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICG----NEDLPSMDVLEL- 429
SL+ C +R++ A +L ++M GC+P YN+LI +C +E L + +EL
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 430 ------------------------AETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKA 465
AE + EM GV N V + LC + E A
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 466 FNVIREMMSKGFIPDIGTYS 485
++ +M+ +G PD TY+
Sbjct: 525 AQLMDQMIMEGQKPDKYTYN 544
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 133/316 (42%), Gaps = 34/316 (10%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI C+ A E L G T+N+L+ A + EM +
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEF---VPDTILYTKMISGLCEASLFEE 318
G D FT SLC GK +AL ++++ E I Y +I G C+A+ E
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A + + M + N VTY L+ G + +++ +++ MIMEG P +NSL+
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC--GNEDLPS-------MDVLEL 429
+CR D A +++ M GC+P V Y LI G+C G ++ S M + L
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Query: 430 AETAYS--------------------EMLEVG-VVLNKVNVSNFARCLC-GVGKFEKAFN 467
AY+ EMLE + V+ R LC G G +A +
Sbjct: 609 TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVD 668
Query: 468 VIREMMSKGFIPDIGT 483
+ E++ KGF+P+ +
Sbjct: 669 FLVELLEKGFVPEFSS 684
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 145/319 (45%), Gaps = 12/319 (3%)
Query: 162 VYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEEL 221
+N+L++ + T N+ R+ + E++ + E N+LI C G + AL L
Sbjct: 402 TFNSLIQGLCLTRNH---RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 458
Query: 222 GRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKA 281
+++ G S +TYN L+ F +A K A + EM G S +S T LCK+
Sbjct: 459 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKS 518
Query: 282 GKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTY 338
+ DA L+++ E PD Y +++ C ++A D + M +N C P++VTY
Sbjct: 519 RRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Query: 339 RILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVK 398
L+ G + ++ ++L + M+G +P +N ++ R R + A L ++M++
Sbjct: 579 GTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638
Query: 399 CG-CQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLC 457
P V Y I+ G+C N P + ++ E+LE G V ++ A L
Sbjct: 639 QNEAPPDAVSYRIVFRGLC-NGGGPIREAVDF----LVELLEKGFVPEFSSLYMLAEGLL 693
Query: 458 GVGKFEKAFNVIREMMSKG 476
+ E ++ +M K
Sbjct: 694 TLSMEETLVKLVNMVMQKA 712
>AT5G39710.1 | Symbols: EMB2745 | EMB2745 (EMBRYO DEFECTIVE 2745) |
chr5:15895729-15897972 FORWARD
Length = 747
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 131/287 (45%), Gaps = 9/287 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
NV+I C+ G L + GY +TYN L+ + + A ++H EM
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
G + T HS+CKAG A+ +++ P+ YT ++ G + E
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNE 398
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A L M N P+VVTY L+ G ++ +L M +G P +++++
Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
+CRS D A ++ ++MV+ G +P + Y+ LI G C E + + +L Y EML
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC--EQRRTKEACDL----YEEML 512
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
VG+ ++ + C G EKA + EM+ KG +PD+ TYS
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 133/308 (43%), Gaps = 24/308 (7%)
Query: 184 QFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF 243
+ LRE+ D N LI +C G A+ L +K+ G ++Y+ ++ F
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 244 LRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV---PDT 300
R+ +D A V REM G D+ T C+ + ++A L E+ V PD
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 301 ILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSL 360
YT +I+ C E+A+ N M +P+VVTY +L+ G ++ + KR+L
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK 580
Query: 361 MIMEGCFPSPGIFN---------------SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGY 405
+ E PS ++ SL+ +C + A ++ + M+ +P
Sbjct: 581 LFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDG 640
Query: 406 VVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKA 465
YNI+I G C D+ A T Y EM++ G +L+ V V + L GK +
Sbjct: 641 TAYNIMIHGHCRAGDIRK------AYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNEL 694
Query: 466 FNVIREMM 473
+VI ++
Sbjct: 695 NSVIVHVL 702
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 126/286 (44%), Gaps = 37/286 (12%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ +++++ Y + L + AL + + G+ L+YNA++ +R+++
Sbjct: 136 VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKR----------- 184
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEA 319
N+ ++ + F ++ L + + P+ Y +I G C A + A
Sbjct: 185 -NISFAENVF---------------KEML----ESQVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 320 MDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHA 379
+ ++M C+PNVVTY L+ G + +++ ++L M ++G P+ +N +++
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284
Query: 380 YCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLE 439
CR +L +M + G V YN LI G C + V+ ++EML
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVM------HAEMLR 338
Query: 440 VGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
G+ + + ++ +C G +A + +M +G P+ TY+
Sbjct: 339 HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYT 384
>AT5G64320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25723247-25725439 REVERSE
Length = 730
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 140/287 (48%), Gaps = 9/287 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI Y + GL ALE L +++ G K + +Y LV F + K+D AY V EMS
Sbjct: 393 NSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA 452
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
G ++ C + CK + +A+ + + ++ PD + +ISGLCE +
Sbjct: 453 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 512
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ L M + + N VTY L+ LR+ ++ +++++ M+ +G +NSL+
Sbjct: 513 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIK 572
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
CR+ + A L +KM++ G P + NILI G+C + ++E A EM+
Sbjct: 573 GLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRS------GMVEEAVEFQKEMV 626
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
G + V ++ LC G+ E + R++ ++G PD T++
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 131/306 (42%), Gaps = 41/306 (13%)
Query: 215 NAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCF 274
N AL+ L + G T+N +++ + ++++ A + M G++ D T G
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328
Query: 275 AHSLCKAGK---WRDALTLIEKEEFV--------------------------------PD 299
+ LCK G+ +D I K E V PD
Sbjct: 329 MNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388
Query: 300 TILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILS 359
Y +I G + L A++ L+ MR C PNV +Y IL+ G + ++ +L+
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 360 LMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNE 419
M +G P+ FN L+ A+C+ A ++ ++M + GC+P +N LI G+C
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC--- 505
Query: 420 DLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIP 479
+D ++ A +M+ GVV N V + G+ ++A ++ EM+ +G
Sbjct: 506 ---EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562
Query: 480 DIGTYS 485
D TY+
Sbjct: 563 DEITYN 568
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 5/247 (2%)
Query: 180 RIPE--QFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYN 237
RIPE + RE+ + + N LI C+ AL L + G A+ +TYN
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 238 ALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---E 294
L+ FLR ++ A + EM G +D T LC+AG+ A +L EK +
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 295 EFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRC 354
P I +I+GLC + + EEA++F M P++VT+ L+ G R ++
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 355 KRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG 414
+ + EG P FN+L+ C+ A LL + ++ G P + ++IL+
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Query: 415 ICGNEDL 421
I E L
Sbjct: 714 IIPQETL 720
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 151/370 (40%), Gaps = 47/370 (12%)
Query: 118 LRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNS 177
LR K++ + ++L L N ++ F W G Q GY H+ VY L I N
Sbjct: 69 LRNSFHKITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVL---IGKLGANG 125
Query: 178 NDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKD-FGYKASRLTY 236
+ ++ L ++KDE L ++R Y + G + +++ + + + +Y
Sbjct: 126 EFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSY 185
Query: 237 NALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEF 296
N ++ + + H+ +N+ Y M S +
Sbjct: 186 NVVLEILVSGN-------CHKVAANVFYDMLS-------------------------RKI 213
Query: 297 VPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKR 356
P + ++ C + + A+ L M + C+PN V Y+ L+ + ++ +
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQ 273
Query: 357 ILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC 416
+L M + GC P FN ++ C+ + A K++ +M+ G P + Y L+ G+C
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
Query: 417 GNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMM-SK 475
+ ++ A+ + + + +V+ + F G+ + A V+ +M+ S
Sbjct: 334 ------KIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTH----GRLDDAKAVLSDMVTSY 383
Query: 476 GFIPDIGTYS 485
G +PD+ TY+
Sbjct: 384 GIVPDVCTYN 393
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 3/219 (1%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
N LI +C+ A+E + G K T+N+L+ +++ A + R+M
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVP---DTILYTKMISGLCEASLFE 317
+ G ++ T ++ + G+ ++A L+ + F D I Y +I GLC A +
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
+A +M + P+ ++ IL+ G R + M++ G P FNSL+
Sbjct: 582 KARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC 416
+ CR+ + +K+ G P V +N L+ +C
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 3/155 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI+ C+ G + A ++ G+ S ++ N L+ R+ ++ A +EM
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
G + D T + LC+AG+ D LT+ K E PDT+ + ++S LC+ +
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGR 353
A L+ + +PN T+ ILL + ++ L R
Sbjct: 688 ACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
>AT1G09900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3218133-3219929 FORWARD
Length = 598
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 140/287 (48%), Gaps = 14/287 (4%)
Query: 203 VLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNL 262
LIR +C+ G A + L L+ G +TYN ++ + +A +++ A V MS
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS-- 199
Query: 263 GYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEA 319
S D T SLC +GK + A+ ++++ + PD I YT +I C S A
Sbjct: 200 -VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA 258
Query: 320 MDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHA 379
M L+ MR C P+VVTY +L+ G ++ +L + L+ M GC P+ N ++ +
Sbjct: 259 MKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS 318
Query: 380 YCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLP-SMDVLELAETAYSEML 438
C + + A KLL M++ G P V +NILI +C L ++D+LE +M
Sbjct: 319 MCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE-------KMP 371
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ G N ++ + C K ++A + M+S+G PDI TY+
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 14/288 (4%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
NV+I YC+ G N AL L R+ +TYN ++ + KL A V M
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
D T + C+ A+ L+++ PD + Y +++G+C+ +E
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ FLN M ++ C PNV+T+ I+L + +++L+ M+ +G PS FN L++
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLP-SMDVLELAETAYSEM 437
CR A +L+KM + GCQP + YN L+ G C + + +++ LE M
Sbjct: 353 FLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE-------RM 405
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ G + V + LC GK E A ++ ++ SKG P + TY+
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 155/351 (44%), Gaps = 28/351 (7%)
Query: 155 GYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDK-----EVLGKLLN------- 202
GY + NAL +++ + + + LR + D K EVL ++L
Sbjct: 181 GYCKAGEINNAL-SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 203 ----VLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
+LI C++ A++ L ++D G +TYN LV + +LD A +
Sbjct: 240 ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 299
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASL 315
M + G + T S+C G+W DA L+ ++ F P + + +I+ LC L
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 359
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
A+D L +M + C PN ++Y LL G ++K++ R L M+ GC+P +N+
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC-GNEDLPSMDVLELAETAY 434
++ A C+ A ++L ++ GC P + YN +I G+ + ++ +L+
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLD------ 473
Query: 435 SEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
EM + + + S+ L GK ++A E G P+ T++
Sbjct: 474 -EMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFN 523
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 125/281 (44%), Gaps = 11/281 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N+++R C G W A + L + G+ S +T+N L+ R L A + +M
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
G +S + H CK K A+ +E+ PD + Y M++ LC+ E+
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A++ LN++ + C P ++TY ++ G + + G+ ++L M + P ++SLV
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLP-SMDVLELAETAYSEM 437
R A K + + G +P V +N ++ G+C + ++D L M
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVF-------M 545
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFI 478
+ G N+ + + L G ++A ++ E+ +KG +
Sbjct: 546 INRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 41/265 (15%)
Query: 256 HREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEF---VPDTILYTKMISGLCE 312
H N ++++ + + G+ + +E + VPD I T +I G C
Sbjct: 90 HYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149
Query: 313 ASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQL--------------------- 351
+A L + + +P+V+TY +++ G + ++
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNT 209
Query: 352 --------GRCKR---ILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCG 400
G+ K+ +L M+ C+P + L+ A CR +A KLL +M G
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG 269
Query: 401 CQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVG 460
C P V YN+L+ GIC L+ A ++M G N + + R +C G
Sbjct: 270 CTPDVVTYNVLVNGICKE------GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTG 323
Query: 461 KFEKAFNVIREMMSKGFIPDIGTYS 485
++ A ++ +M+ KGF P + T++
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFN 348
>AT5G16640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5461031-5462545 FORWARD
Length = 504
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 161/387 (41%), Gaps = 48/387 (12%)
Query: 138 KNPELGIKFFIWAGRQ-IGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEV 196
K + + ++W Q +G H N LL + S + FL ++ E
Sbjct: 93 KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLS---LALSFLGKMIKLGHEP 149
Query: 197 LGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVH 256
L+ +C+ AL ++ GYK + + YN ++ +++++D A +
Sbjct: 150 SIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLL 209
Query: 257 REMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLI------------------------- 291
M G D T LC +G+W DA ++
Sbjct: 210 NRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKE 269
Query: 292 ----EKEEFV---------PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTY 338
E EEF PD + Y+ +I GLC S +EA + M + C P+VVTY
Sbjct: 270 GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTY 329
Query: 339 RILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVK 398
IL+ G + K++ ++ M G + + L+ YCR+ + A ++ ++MV
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
Query: 399 CGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCG 458
CG P + YN+L+ G+C N +E A ++M + G+ + V + R +C
Sbjct: 390 CGVHPNIITYNVLLHGLCDNGK------IEKALVILADMQKNGMDADIVTYNIIIRGMCK 443
Query: 459 VGKFEKAFNVIREMMSKGFIPDIGTYS 485
G+ A+++ + +G +PDI TY+
Sbjct: 444 AGEVADAWDIYCSLNCQGLMPDIWTYT 470
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 91/191 (47%), Gaps = 10/191 (5%)
Query: 297 VPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILL-CGCLRKKQLGRCK 355
+P +++++S + + ++ + +M+ N+ T ILL C C R QL
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC-RCSQLSLAL 136
Query: 356 RILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
L MI G PS F SL++ +CR A + +MV G +P V+YN +I G+
Sbjct: 137 SFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGL 196
Query: 416 CGNEDLP-SMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMS 474
C ++ + ++D+L + M + G+ + V ++ LC G++ A ++ M
Sbjct: 197 CKSKQVDNALDLL-------NRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK 249
Query: 475 KGFIPDIGTYS 485
+ PD+ T++
Sbjct: 250 REIYPDVFTFN 260
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 9/219 (4%)
Query: 234 LTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL--- 290
+TY+ L+ +LD A + M + G D T + CK+ K + L
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCE 351
Query: 291 IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQ 350
+ + V +T+ YT +I G C A A + RM PN++TY +LL G +
Sbjct: 352 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Query: 351 LGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNI 410
+ + IL+ M G +N ++ C++ + + A+ + + G P Y
Sbjct: 412 IEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTT 471
Query: 411 LIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNV 449
++ G L + A+ + +M E G++ N+ V
Sbjct: 472 MMLG------LYKKGLRREADALFRKMKEDGILPNECYV 504
>AT1G64580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23985078-23988740 REVERSE
Length = 1052
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 129/293 (44%), Gaps = 13/293 (4%)
Query: 196 VLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLV 255
LG LLN +CQ + A+ + + FG+ + + YN ++ + L+ A V
Sbjct: 680 TLGSLLN----GFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 735
Query: 256 HREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCE 312
M G D+ T L +G+W DA L+ K + P+ I +T +I +
Sbjct: 736 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 795
Query: 313 ASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGI 372
EA + M S +PNV TY L+ G LG K + LM+ +GCFP
Sbjct: 796 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 855
Query: 373 FNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAET 432
+N+L+ +C+S+ KL +M G YN LI G C L +A+
Sbjct: 856 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYC------QAGKLNVAQK 909
Query: 433 AYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
++ M++ GV + V + CLC GK EKA ++ ++ DI TY+
Sbjct: 910 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYN 962
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 122/287 (42%), Gaps = 9/287 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI C+NG N ALE L ++ G A +TYN L+ + + A + R+M
Sbjct: 180 NTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK 239
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
+ D T K G +A L + + P+ + Y +I+GLC +
Sbjct: 240 RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYD 299
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A + M + C PNVVTY L+ G + + + ++ M EG +N+L+H
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIH 359
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
YC+ A + MV P + + IL+ G+C N ++ S A + +M
Sbjct: 360 GYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES------ALVKFDDMR 413
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
E + V + LC K EKA+ + + +G PD TY+
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 123/287 (42%), Gaps = 9/287 (3%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
+LI +C+ + AL LG++ GY+ S +T+ +L+ F ++ A+ + M
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFE 317
GY + LCK G+ AL L+ EK+ D + Y +++GLC + +
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
+A L M S P+VVT+ L+ +++ L + + MI P+ +NS++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
+ C A K M GC P V YN LI G C +++ + M
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFC------KFRMVDEGMKLFQRM 342
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
G + + C VGK A ++ M+S+ PDI T+
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 112/266 (42%), Gaps = 9/266 (3%)
Query: 223 RLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAG 282
+++ +G ++ L+ F R +L A V +M LGY T G H C
Sbjct: 96 KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155
Query: 283 KWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYR 339
+ DA +L+ K + P+ ++Y +I GLC+ A++ LN M +VVTY
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 340 ILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKC 399
LL G + R+L M+ P F +L+ + + + A +L K+M++
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 400 GCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGV 459
P V YN +I G+C + L A+ + M G N V + C
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYD------AKKTFDLMASKGCFPNVVTYNTLISGFCKF 329
Query: 460 GKFEKAFNVIREMMSKGFIPDIGTYS 485
++ + + M +GF DI TY+
Sbjct: 330 RMVDEGMKLFQRMSCEGFNADIFTYN 355
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 113/257 (43%), Gaps = 9/257 (3%)
Query: 232 SRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL- 290
S + + ++ V + K D ++ +M NLG S D ++ H C+ + AL L
Sbjct: 607 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 666
Query: 291 --IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRK 348
+ K F P + +++G C+ + F+EA+ ++ M +PNVV Y ++ G +
Sbjct: 667 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKN 726
Query: 349 KQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVY 408
+ L + M +G +N+L+ S ++ A +LL+ MVK P + +
Sbjct: 727 RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF 786
Query: 409 NILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNV 468
LI +L LE A Y EM+ VV N ++ C G A +
Sbjct: 787 TALIDTFVKEGNL-----LE-ARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYM 840
Query: 469 IREMMSKGFIPDIGTYS 485
M+SKG PD+ TY+
Sbjct: 841 FDLMVSKGCFPDVVTYN 857
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 125/301 (41%), Gaps = 44/301 (14%)
Query: 223 RLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAG 282
++++ G ++ L+ F R +L A + +M LG+ TLG + C+
Sbjct: 633 KMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGN 692
Query: 283 KWRDALTLIEKEE---FVPDTILYTKMISGLCE--------------------------- 312
++++A++L++ + FVP+ ++Y +I+GLC+
Sbjct: 693 RFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYN 752
Query: 313 --------ASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIME 364
+ + +A L M PNV+ + L+ +++ L + + MI
Sbjct: 753 TLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR 812
Query: 365 GCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSM 424
P+ +NSL++ +C A + MV GC P V YN LI G C ++ +
Sbjct: 813 SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE-- 870
Query: 425 DVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
D ++L + EM G+V + + C GK A V M+ G PDI TY
Sbjct: 871 DGMKL----FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 926
Query: 485 S 485
+
Sbjct: 927 N 927
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 13/215 (6%)
Query: 274 FAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANS 330
F HS+ ++ DA L + + +P + +T++++ +E + F +M
Sbjct: 46 FLHSI----RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 331 CIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAY 390
++ ++ IL+ R +L +L M+ G PS F SL+H +C A+
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 391 KLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVS 450
L+ MVK G +P VVYN LI G+C N + L +A +EM + G+ + V +
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGE------LNIALELLNEMEKKGLGADVVTYN 215
Query: 451 NFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
LC G++ A ++R+MM + PD+ T++
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 116/302 (38%), Gaps = 41/302 (13%)
Query: 155 GYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLW 214
GY VYN L I+ N I + L E++ + N L+ C +G W
Sbjct: 171 GYEPNVVVYNTL---IDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 215 NAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCF 274
+ A L + +T+ AL+ VF++ LD A +++EM ++ T
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 275 AHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSC 331
+ LC G+ DA L+ + P+ + Y +ISG C+ + +E M RM
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 332 IPNVVTYRILLCGCLRKKQLGRCKRILSLM--------IMEGCFPSPGI----------- 372
++ TY L+ G + +L I M I+ C G+
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 373 ----------------FNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC 416
+N ++H C++ A++L ++ G +P Y I+I G+C
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
Query: 417 GN 418
N
Sbjct: 468 KN 469
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 5/206 (2%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N +I C +G A + + G + +TYN L+ F + +D + + MS
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
G++ D FT H C+ GK R AL + + PD I + ++ GLC E
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIES 404
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ + MR + +V Y I++ G + ++ + + + +EG P + ++
Sbjct: 405 ALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Query: 379 AYCRSRDYSYAYKLLKKMVKCG--CQ 402
C++ A +L+++M + G CQ
Sbjct: 465 GLCKNGPRREADELIRRMKEEGIICQ 490
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 3/211 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI +C +G A + G +TYN L+ F ++++++ + EM+
Sbjct: 822 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 881
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE---EFVPDTILYTKMISGLCEASLFEE 318
G D+FT H C+AGK A + + PD + Y ++ LC E+
Sbjct: 882 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 941
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ + ++ + +++TY I++ G R +L + + +G P + +++
Sbjct: 942 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 1001
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYN 409
CR A KL ++M + G P +Y+
Sbjct: 1002 GLCRKGLQREADKLCRRMKEDGFMPSERIYD 1032
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 94/255 (36%), Gaps = 42/255 (16%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI +G W A L + + + + AL+ F++ L A +++EM
Sbjct: 752 NTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIR 811
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
+ FT + C G DA L+ + PD + Y +I+G C++ E+
Sbjct: 812 RSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVED 871
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGI------ 372
M M + + TY L+ G + +L +++ + M+ C SP I
Sbjct: 872 GMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV--DCGVSPDIVTYNIL 929
Query: 373 -------------------------------FNSLVHAYCRSRDYSYAYKLLKKMVKCGC 401
+N ++ CR+ A+ L + + + G
Sbjct: 930 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 989
Query: 402 QPGYVVYNILIGGIC 416
+P + Y +I G+C
Sbjct: 990 KPDAIAYITMISGLC 1004
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 283 KWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYR 339
K+ DA +L + + +P + +T++++ + + + F+ + ++M ++ ++
Sbjct: 588 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 647
Query: 340 ILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKC 399
IL+ R +L +L M+ G PS SL++ +C+ + A L+ M
Sbjct: 648 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 707
Query: 400 GCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGV 459
G P V+YN +I G+C N DL + A + M + G+ + V + L
Sbjct: 708 GFVPNVVIYNTVINGLCKNRDLNN------ALEVFYCMEKKGIRADAVTYNTLISGLSNS 761
Query: 460 GKFEKAFNVIREMMSKGFIPDI 481
G++ A ++R+M+ + P++
Sbjct: 762 GRWTDAARLLRDMVKRKIDPNV 783
>AT1G02060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:360918-363050 REVERSE
Length = 710
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 177/415 (42%), Gaps = 64/415 (15%)
Query: 123 EKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIP 182
+ +S + V + L L+K P G++FF W + G+SH + + +LE + N + +
Sbjct: 64 QTISRTTVLQTLRLIKVPADGLRFFDWVSNK-GFSHKEQSFFLMLEFLGRARNLN---VA 119
Query: 183 EQFLREIKDEDK---EVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNAL 239
FL I+ ++ + N LIR Y GL+ +++ +K G S LT+N+L
Sbjct: 120 RNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSL 179
Query: 240 VIVFLRAEKLDTAYLVHREM-SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV- 297
+ + L+ + A+ + EM G + DS+T + CK +A + + E
Sbjct: 180 LSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYH 239
Query: 298 --PDTILYTKMISGLCEASLFEEAMDFLNRM--RANSCIPNVVTYRILLCGCLRKKQLGR 353
PD + Y +I GLC A + A + L+ M +A PNVV+Y L+ G K+++
Sbjct: 240 CNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDE 299
Query: 354 CKRILSLMIMEGCFPSPGIFNS-------------------------------------L 376
+ M+ G P+ +N+ L
Sbjct: 300 AVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNIL 359
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
+ A+C + A K+ ++M+ P Y++LI +C + + AET ++E
Sbjct: 360 IKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNE------FDRAETLFNE 413
Query: 437 MLEVGVVLNKVNVSNFARC-------LCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+ E V+L K A LC GK ++A V R++M +G + D +Y
Sbjct: 414 LFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG-VQDPPSY 467
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 124/321 (38%), Gaps = 48/321 (14%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTA--YLVHREM 259
L+R YC + A+ + G K + +TYN L+ A + D L+
Sbjct: 285 TTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGND 344
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE---EFVPDTILYTKMISGLCEASLF 316
+ ++ D+ T + C AG A+ + ++ + PD+ Y+ +I LC + F
Sbjct: 345 AFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEF 404
Query: 317 EEAMDFLNRM-------RANSCIPNVVTYRIL---LCGCLRKKQLGRCKRILSLMIMEGC 366
+ A N + + C P Y + LC + KQ + R +M+
Sbjct: 405 DRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFR----QLMKRG 460
Query: 367 FPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICG-NEDLPSMD 425
P + +L+ +CR + AY+LL M++ P Y +LI G+ E L + D
Sbjct: 461 VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHD 520
Query: 426 VLE-----------------LAETAYSE-----------MLEVGVVLNKVNVSNFARCLC 457
L+ LAE A + MLE + N + R L
Sbjct: 521 TLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLF 580
Query: 458 GVGKFEKAFNVIREMMSKGFI 478
+ EKAF ++R + G++
Sbjct: 581 SSAQKEKAFLIVRLLYDNGYL 601
>AT1G05670.2 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 130/287 (45%), Gaps = 9/287 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N++I CQ G A L ++ GY ++Y+ +V + R +LD + + M
Sbjct: 693 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 752
Query: 262 LGYSMDSFTLGCFAHSLC---KAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
G +S+ G LC K + +A + + ++ +PDT++YT +I G C+
Sbjct: 753 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 812
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A F M + P+V+TY ++ G + + ++ M +G P F L++
Sbjct: 813 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 872
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
YC++ A+++ M++ GC P V Y LI G+C DL S + L EM
Sbjct: 873 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL------LHEMW 926
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
++G+ N ++ LC G E+A ++ E + G D TY+
Sbjct: 927 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 973
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 117/280 (41%), Gaps = 9/280 (3%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
LI YC+ G A + G + +TY L+ + LD+A + EM +G
Sbjct: 870 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFEEAM 320
+ FT + LCK+G +A+ L+ E DT+ YT ++ C++ ++A
Sbjct: 930 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 989
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
+ L M P +VT+ +L+ G L +++L+ M+ +G P+ FNSLV Y
Sbjct: 990 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 1049
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEV 440
C + A + K M G P Y L+ G C ++ L + EM
Sbjct: 1050 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL------FQEMKGK 1103
Query: 441 GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
G ++ S + KF +A V +M +G D
Sbjct: 1104 GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 1143
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 130/316 (41%), Gaps = 32/316 (10%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
LI +C+ G AA + + LTY A++ F + + A + EM
Sbjct: 798 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 857
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
G DS T + CKAG +DA + + + P+ + YT +I GLC+ +
Sbjct: 858 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 917
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A + L+ M PN+ TY ++ G + + +++ G + +L+
Sbjct: 918 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 977
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC-------GNEDLPSM------- 424
AYC+S + A ++LK+M+ G QP V +N+L+ G C G + L M
Sbjct: 978 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 1037
Query: 425 ---------------DVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVI 469
+ L+ A Y +M GV + N + C ++A+ +
Sbjct: 1038 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 1097
Query: 470 REMMSKGFIPDIGTYS 485
+EM KGF + TYS
Sbjct: 1098 QEMKGKGFSVSVSTYS 1113
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 133/327 (40%), Gaps = 48/327 (14%)
Query: 196 VLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLV 255
+ G ++ +L R C+ A E+ R G + Y L+ F + + A
Sbjct: 761 IYGSIIGLLCR-ICKLAEAEEAFSEMIRQ---GILPDTVVYTTLIDGFCKRGDIRAASKF 816
Query: 256 HREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCE 312
EM + + D T C+ G +A L + + PD++ +T++I+G C+
Sbjct: 817 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 876
Query: 313 ASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGI 372
A ++A N M C PNVVTY L+ G ++ L +L M G P+
Sbjct: 877 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 936
Query: 373 FNSLVH-----------------------------------AYCRSRDYSYAYKLLKKMV 397
+NS+V+ AYC+S + A ++LK+M+
Sbjct: 937 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 996
Query: 398 KCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLC 457
G QP V +N+L+ G C + +LE E + ML G+ N ++ + C
Sbjct: 997 GKGLQPTIVTFNVLMNGFCLH------GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 1050
Query: 458 GVGKFEKAFNVIREMMSKGFIPDIGTY 484
+ A + ++M S+G PD TY
Sbjct: 1051 IRNNLKAATAIYKDMCSRGVGPDGKTY 1077
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 6/184 (3%)
Query: 303 YTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMI 362
Y +I +C+ +EA L M P+V++Y ++ G R +L + +++ +M
Sbjct: 692 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 751
Query: 363 MEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLP 422
+G P+ I+ S++ CR + A + +M++ G P VVY LI G C D+
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 423 SMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIG 482
+ A + EM + + + + C +G +A + EM KG PD
Sbjct: 812 A------ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 865
Query: 483 TYSK 486
T+++
Sbjct: 866 TFTE 869
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 334 NVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLL 393
NV +Y I++ + ++ +L LM ++G P ++++V+ YCR + +KL+
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 394 KKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFA 453
+ M + G +P +Y +IG +C + L AE A+SEM+ G++ + V +
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLC------RICKLAEAEEAFSEMIRQGILPDTVVYTTLI 801
Query: 454 RCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
C G A EM S+ PD+ TY+
Sbjct: 802 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 833
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 77/211 (36%), Gaps = 38/211 (18%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N ++ C++G A++ +G + G A +TY L+ + ++ ++D A + +EM
Sbjct: 938 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 997
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRD----------------------------------A 287
G T + C G D A
Sbjct: 998 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA 1057
Query: 288 LTLIEKE----EFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLC 343
T I K+ PD Y ++ G C+A +EA M+ +V TY +L+
Sbjct: 1058 ATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 1117
Query: 344 GCLRKKQLGRCKRILSLMIMEGCFPSPGIFN 374
G L++K+ + + M EG IF+
Sbjct: 1118 GFLKRKKFLEAREVFDQMRREGLAADKEIFD 1148
>AT1G05670.1 | Symbols: | UDP-glucoronosyl/UDP-glucosyl transferase
family protein | chr1:1698574-1702715 REVERSE
Length = 1184
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 130/287 (45%), Gaps = 9/287 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N++I CQ G A L ++ GY ++Y+ +V + R +LD + + M
Sbjct: 693 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 752
Query: 262 LGYSMDSFTLGCFAHSLC---KAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
G +S+ G LC K + +A + + ++ +PDT++YT +I G C+
Sbjct: 753 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 812
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A F M + P+V+TY ++ G + + ++ M +G P F L++
Sbjct: 813 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 872
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
YC++ A+++ M++ GC P V Y LI G+C DL S + L EM
Sbjct: 873 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL------LHEMW 926
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
++G+ N ++ LC G E+A ++ E + G D TY+
Sbjct: 927 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 973
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 117/280 (41%), Gaps = 9/280 (3%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
LI YC+ G A + G + +TY L+ + LD+A + EM +G
Sbjct: 870 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFEEAM 320
+ FT + LCK+G +A+ L+ E DT+ YT ++ C++ ++A
Sbjct: 930 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 989
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
+ L M P +VT+ +L+ G L +++L+ M+ +G P+ FNSLV Y
Sbjct: 990 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 1049
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEV 440
C + A + K M G P Y L+ G C ++ L + EM
Sbjct: 1050 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFL------FQEMKGK 1103
Query: 441 GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
G ++ S + KF +A V +M +G D
Sbjct: 1104 GFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 1143
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 130/316 (41%), Gaps = 32/316 (10%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
LI +C+ G AA + + LTY A++ F + + A + EM
Sbjct: 798 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 857
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
G DS T + CKAG +DA + + + P+ + YT +I GLC+ +
Sbjct: 858 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 917
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A + L+ M PN+ TY ++ G + + +++ G + +L+
Sbjct: 918 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 977
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC-------GNEDLPSM------- 424
AYC+S + A ++LK+M+ G QP V +N+L+ G C G + L M
Sbjct: 978 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAP 1037
Query: 425 ---------------DVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVI 469
+ L+ A Y +M GV + N + C ++A+ +
Sbjct: 1038 NATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLF 1097
Query: 470 REMMSKGFIPDIGTYS 485
+EM KGF + TYS
Sbjct: 1098 QEMKGKGFSVSVSTYS 1113
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 133/327 (40%), Gaps = 48/327 (14%)
Query: 196 VLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLV 255
+ G ++ +L R C+ A E+ R G + Y L+ F + + A
Sbjct: 761 IYGSIIGLLCR-ICKLAEAEEAFSEMIRQ---GILPDTVVYTTLIDGFCKRGDIRAASKF 816
Query: 256 HREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCE 312
EM + + D T C+ G +A L + + PD++ +T++I+G C+
Sbjct: 817 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 876
Query: 313 ASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGI 372
A ++A N M C PNVVTY L+ G ++ L +L M G P+
Sbjct: 877 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 936
Query: 373 FNSLVH-----------------------------------AYCRSRDYSYAYKLLKKMV 397
+NS+V+ AYC+S + A ++LK+M+
Sbjct: 937 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 996
Query: 398 KCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLC 457
G QP V +N+L+ G C + +LE E + ML G+ N ++ + C
Sbjct: 997 GKGLQPTIVTFNVLMNGFCLH------GMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 1050
Query: 458 GVGKFEKAFNVIREMMSKGFIPDIGTY 484
+ A + ++M S+G PD TY
Sbjct: 1051 IRNNLKAATAIYKDMCSRGVGPDGKTY 1077
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 6/184 (3%)
Query: 303 YTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMI 362
Y +I +C+ +EA L M P+V++Y ++ G R +L + +++ +M
Sbjct: 692 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 751
Query: 363 MEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLP 422
+G P+ I+ S++ CR + A + +M++ G P VVY LI G C D+
Sbjct: 752 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 811
Query: 423 SMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIG 482
+ A + EM + + + + C +G +A + EM KG PD
Sbjct: 812 A------ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 865
Query: 483 TYSK 486
T+++
Sbjct: 866 TFTE 869
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 334 NVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLL 393
NV +Y I++ + ++ +L LM ++G P ++++V+ YCR + +KL+
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 394 KKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFA 453
+ M + G +P +Y +IG +C + L AE A+SEM+ G++ + V +
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLC------RICKLAEAEEAFSEMIRQGILPDTVVYTTLI 801
Query: 454 RCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
C G A EM S+ PD+ TY+
Sbjct: 802 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 833
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 77/211 (36%), Gaps = 38/211 (18%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N ++ C++G A++ +G + G A +TY L+ + ++ ++D A + +EM
Sbjct: 938 NSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG 997
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRD----------------------------------A 287
G T + C G D A
Sbjct: 998 KGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKA 1057
Query: 288 LTLIEKE----EFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLC 343
T I K+ PD Y ++ G C+A +EA M+ +V TY +L+
Sbjct: 1058 ATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIK 1117
Query: 344 GCLRKKQLGRCKRILSLMIMEGCFPSPGIFN 374
G L++K+ + + M EG IF+
Sbjct: 1118 GFLKRKKFLEAREVFDQMRREGLAADKEIFD 1148
>AT3G22470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7966066-7967925 REVERSE
Length = 619
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 154/336 (45%), Gaps = 12/336 (3%)
Query: 153 QIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNG 212
+ G+ + Y +L + + N++ + R++++ + + +++I C++G
Sbjct: 203 EYGFQPDEVTYGPVLNRLCKSGNSA---LALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
Query: 213 LWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLG 272
++ AL ++ G KA +TY++L+ K D + REM D T
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS 319
Query: 273 CFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRAN 329
K GK +A L + PDTI Y +I G C+ + EA + M +
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 330 SCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYA 389
C P++VTY IL+ + K++ R+ + +G P+ +N+LV +C+S + A
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 390 YKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNV 449
+L ++MV G P V Y IL+ G+C N +L LE+ E + +G+ + + +
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK--ALEIFEKMQKSRMTLGIGIYNIII 497
Query: 450 SNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+C K + A+++ + KG PD+ TY+
Sbjct: 498 HG----MCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 117/285 (41%), Gaps = 9/285 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
+ LI + + G A E + G +TYN+L+ F + L A + M +
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
G D T +S CKA + D + L I + +P+TI Y ++ G C++
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A + M + P+VVTY ILL G +L + I M GI+N ++H
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
C + A+ L + G +P V YN++IGG+C L D+L + +M
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML------FRKMK 552
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGT 483
E G + + R G + +I EM GF D T
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST 597
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 121/323 (37%), Gaps = 44/323 (13%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF-LRAEKLDTAYLVHR-- 257
+ ++I YC+ A LGR GY+ +T++ LV F L + LV R
Sbjct: 108 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 167
Query: 258 --------------------------------EMSNLGYSMDSFTLGCFAHSLCKAGKWR 285
M G+ D T G + LCK+G
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 286 DALTLIEKEE---FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILL 342
AL L K E + Y+ +I LC+ F++A+ N M +VVTY L+
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 343 CGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQ 402
G + ++L MI P F++L+ + + A +L +M+ G
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 403 PGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKF 462
P + YN LI G C + L A + M+ G + V S C +
Sbjct: 348 PDTITYNSLIDGFCKE------NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 463 EKAFNVIREMMSKGFIPDIGTYS 485
+ + RE+ SKG IP+ TY+
Sbjct: 402 DDGMRLFREISSKGLIPNTITYN 424
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 118/255 (46%), Gaps = 9/255 (3%)
Query: 234 LTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE- 292
+ +N L R ++ D + M G D +T+ + C+ K A +++
Sbjct: 71 IDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGR 130
Query: 293 --KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQ 350
K + PDTI ++ +++G C EA+ ++RM P++VT L+ G K +
Sbjct: 131 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 190
Query: 351 LGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNI 410
+ ++ M+ G P + +++ C+S + + A L +KM + + V Y+I
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 411 LIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIR 470
+I +C + D L L ++EM G+ + V S+ LC GK++ ++R
Sbjct: 251 VIDSLCKDGSFD--DALSL----FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 471 EMMSKGFIPDIGTYS 485
EM+ + IPD+ T+S
Sbjct: 305 EMIGRNIIPDVVTFS 319
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 34/236 (14%)
Query: 283 KWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYR 339
K DA+ L E + +P I + ++ S + ++ + F M N ++ T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 340 ILL-CGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVK 398
I++ C C RKK+L +L G P F++LV+ +C S A L+ +MV+
Sbjct: 110 IMINCYC-RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 399 CGCQPGYVVYNILIGGIC----GNEDLPSMDVL-------------------------EL 429
+P V + LI G+C +E L +D + L
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 430 AETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
A + +M E + + V S LC G F+ A ++ EM KG D+ TYS
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYS 284
>AT1G79540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29920334-29922676 REVERSE
Length = 780
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 166/365 (45%), Gaps = 14/365 (3%)
Query: 125 LSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQ 184
LS++++ V+ N +LG +FFIWA R+ ++ + +++M+ N + Q
Sbjct: 58 LSKNIITSVIKDEVNRQLGFRFFIWASRRE-RLRSRESFGLVIDMLSEDNGCD---LYWQ 113
Query: 185 FLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFL 244
L E+K V VLI Y + G+ A+E GR+K+F + TYN ++ V +
Sbjct: 114 TLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMM 173
Query: 245 RAEKLDT-AYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDT 300
R E A+ V+ EM S + +T G L K G+ DA + + P+
Sbjct: 174 REEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNR 233
Query: 301 ILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSL 360
+ YT +ISGLC+ ++A M+ + P+ V + LL G + ++ +L L
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRL 293
Query: 361 MIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNED 420
+G ++SL+ R+R Y+ A++L M+K +P ++Y ILI G
Sbjct: 294 FEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQG------ 347
Query: 421 LPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
L +E A S M G+ + + + LCG G E+ ++ EM PD
Sbjct: 348 LSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPD 407
Query: 481 IGTYS 485
T++
Sbjct: 408 ACTHT 412
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 116/299 (38%), Gaps = 29/299 (9%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N L+ +C+ G A E L + G+ Y++L+ RA + A+ ++ M
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK 331
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
D L KAGK DAL L+ + PDT Y +I LC L EE
Sbjct: 332 KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEE 391
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
M P+ T+ IL+C R + + I + + GC PS FN+L+
Sbjct: 392 GRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALID 451
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSM-----------DVL 427
C+S + A LL KM + G L GN +M D+
Sbjct: 452 GLCKSGELKEARLLLHKM-----EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLA 506
Query: 428 ELAETAYS-EMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
A+T S +++ V++N C G + A ++ + KG PD TY+
Sbjct: 507 HFADTGSSPDIVSYNVLING---------FCRAGDIDGALKLLNVLQLKGLSPDSVTYN 556
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 92/225 (40%), Gaps = 11/225 (4%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
L +LI+ + G AL+ L + G YNA++ L+ + EM
Sbjct: 340 LYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEM 399
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLF 316
S D+ T S+C+ G R+A T IEK P + +I GLC++
Sbjct: 400 SETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGEL 459
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCG------CLRKKQLGRCKRILSLMIMEGCFPSP 370
+EA L++M P + R+ G + + + R L+ G P
Sbjct: 460 KEARLLLHKMEVGR--PASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDI 517
Query: 371 GIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
+N L++ +CR+ D A KLL + G P V YN LI G+
Sbjct: 518 VSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGL 562
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS- 260
+LI C+NGL A E ++ G S T+NAL+ ++ +L A L+ +M
Sbjct: 412 TILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV 471
Query: 261 --------NLGYSMD-SFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLC 311
L +S + SF + S+ KA +RD L PD + Y +I+G C
Sbjct: 472 GRPASLFLRLSHSGNRSFDTMVESGSILKA--YRD-LAHFADTGSSPDIVSYNVLINGFC 528
Query: 312 EASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCF-PSP 370
A + A+ LN ++ P+ VTY L+ G R +GR + L + F SP
Sbjct: 529 RAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHR---VGREEEAFKLFYAKDDFRHSP 585
Query: 371 GIFNSLVHAYCRSRDYSYAYKLLKKMVK 398
++ SL+ CR R A+ L K +K
Sbjct: 586 AVYRSLMTWSCRKRKVLVAFNLWMKYLK 613
>AT1G06580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2014440-2015942 REVERSE
Length = 500
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 135/288 (46%), Gaps = 9/288 (3%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ N +I C+ G N AL+ L +K G + +TYN+L+ + + + +M
Sbjct: 186 IYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDM 245
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLF 316
+G S D T K G+ +A + + P+ + Y +I+GLC L
Sbjct: 246 MRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLL 305
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
+EA LN + + PN VTY L+ G + K++ +IL +M +G +N+L
Sbjct: 306 DEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTL 365
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
YC++ +S A K+L +MV CG P +NIL+ G+C + + ++ L + S+
Sbjct: 366 YQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKA-LVRLEDLQKSK 424
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+ VG++ + + LC K E A+ + + KG PD+ TY
Sbjct: 425 TV-VGIITYNIIIKG----LCKADKVEDAWYLFCSLALKGVSPDVITY 467
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 114/275 (41%), Gaps = 9/275 (3%)
Query: 214 WNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGC 273
+ A + L+ G ++ L+ F R +L A +M LG+ T G
Sbjct: 95 YEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGS 154
Query: 274 FAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANS 330
+ C ++ +A++L+++ + P+ ++Y +I LCE A+D L M+
Sbjct: 155 LVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG 214
Query: 331 CIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAY 390
P+VVTY L+ G RILS M+ G P F++L+ Y + A
Sbjct: 215 IRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAK 274
Query: 391 KLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVS 450
K +M++ P V YN LI G+C + +L+ A+ + ++ G N V +
Sbjct: 275 KQYNEMIQRSVNPNIVTYNSLINGLCIH------GLLDEAKKVLNVLVSKGFFPNAVTYN 328
Query: 451 NFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
C + + ++ M G D TY+
Sbjct: 329 TLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYN 363
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 95/200 (47%), Gaps = 3/200 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI C +GL + A + L L G+ + +TYN L+ + +A+++D + MS
Sbjct: 293 NSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSR 352
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE---EFVPDTILYTKMISGLCEASLFEE 318
G D+FT C+AGK+ A ++ + PD + ++ GLC+ +
Sbjct: 353 DGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGK 412
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ L ++ + + ++TY I++ G + ++ + + ++G P + +++
Sbjct: 413 ALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMI 472
Query: 379 AYCRSRDYSYAYKLLKKMVK 398
R R + A++L +KM K
Sbjct: 473 GLRRKRLWREAHELYRKMQK 492
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 283 KWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYR 339
K+ DALTL + + +P + +++++ + + + +E + + ++ ++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 340 ILL---CGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKM 396
L+ C C R C L M+ G PS F SLV+ +C + A L+ ++
Sbjct: 119 TLIDCFCRCARLSLALSC---LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175
Query: 397 VKCGCQPGYVVYNILIGGICGNEDL-PSMDVLELAETAYSEMLEVGVVLNKVNVSNFARC 455
V G +P V+YN +I +C + ++DVL+ M ++G+ + V ++
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLK-------HMKKMGIRPDVVTYNSLITR 228
Query: 456 LCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
L G + + ++ +MM G PD+ T+S
Sbjct: 229 LFHSGTWGVSARILSDMMRMGISPDVITFS 258
>AT1G12775.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
7 plant structures; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G12300.1); Has 27792 Blast hits to 6269
proteins in 197 species: Archae - 2; Bacteria - 23;
Metazoa - 895; Fungi - 767; Plants - 24554; Viruses - 0;
Other Eukaryotes - 1551 (source: NCBI BLink). |
chr1:4353906-4355840 FORWARD
Length = 644
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 139/323 (43%), Gaps = 44/323 (13%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ N L+ C + ALE + R+ + G+K + +T N LV K+ A ++ M
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE------------------------ 295
G+ + T G + +CK+G+ A+ L+ K E
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 296 --------------FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRIL 341
F D I Y +I G C A +++ L M PNVVT+ +L
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 342 LCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGC 401
+ +++ +L ++L M+ G P+ +NSL+ +C+ A +++ M+ GC
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 399
Query: 402 QPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGK 461
P + +NILI G C + D LEL + EM GV+ N V + + C GK
Sbjct: 400 DPDIMTFNILINGYCKANRID--DGLEL----FREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 462 FEKAFNVIREMMSKGFIPDIGTY 484
E A + +EM+S+ PDI +Y
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSY 476
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 162/337 (48%), Gaps = 14/337 (4%)
Query: 153 QIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNG 212
+ G+ + Y +L ++ + + + + LR++++ + ++ +++I C++G
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTA---LAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 213 LWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLG 272
+ A ++ G+KA +TYN L+ F A + D + R+M S + T
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 273 CFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRAN 329
S K GK R+A L++ + P+TI Y +I G C+ + EEA+ ++ M +
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 330 SCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYA 389
C P+++T+ IL+ G + ++ + M + G + +N+LV +C+S A
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 390 YKLLKKMVKCGCQPGYVVYNILIGGICGNEDL-PSMDVLELAETAYSEMLEVGVVLNKVN 448
KL ++MV +P V Y IL+ G+C N +L ++++ E + E L++G+ + ++
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME-LDIGIYMIIIH 516
Query: 449 VSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+C K + A+++ + KG D Y+
Sbjct: 517 ------GMCNASKVDDAWDLFCSLPLKGVKLDARAYN 547
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 132/288 (45%), Gaps = 9/288 (3%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
L+++I +C+ + A +G++ GY+ + +N L+ ++ A + M
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFE 317
+G+ TL + LC GK DA+ LI++ F P+ + Y +++ +C++
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
AM+ L +M + + V Y I++ G + L + + M ++G +N+L+
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
+C + + KLL+ M+K P V +++LI L D L EM
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL------LKEM 359
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
++ G+ N + ++ C + E+A ++ M+SKG PDI T++
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN 407
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 119/255 (46%), Gaps = 9/255 (3%)
Query: 234 LTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL--- 290
+ +N L + ++ + + ++M + G + +TL + C+ K A +
Sbjct: 89 IDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGK 148
Query: 291 IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQ 350
I K + PDT+++ +++GLC EA++ ++RM P ++T L+ G +
Sbjct: 149 IMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGK 208
Query: 351 LGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNI 410
+ ++ M+ G P+ + +++ C+S + A +LL+KM + + V Y+I
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 411 LIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIR 470
+I G+C + L + A ++EM G + + + C G+++ ++R
Sbjct: 269 IIDGLCKDGSLDN------AFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322
Query: 471 EMMSKGFIPDIGTYS 485
+M+ + P++ T+S
Sbjct: 323 DMIKRKISPNVVTFS 337
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 127/301 (42%), Gaps = 10/301 (3%)
Query: 169 MIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFG 228
+I+S R +Q L+E+ N LI +C+ A++ + + G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 229 YKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDAL 288
+T+N L+ + +A ++D + REMS G ++ T C++GK A
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 289 TLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGC 345
L ++ PD + Y ++ GLC+ E+A++ ++ + ++ Y I++ G
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Query: 346 LRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGY 405
++ + + ++G +N ++ CR S A L +KM + G P
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDE 578
Query: 406 VVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKA 465
+ YNILI G++D + EL E S V K+ ++ + G+ +K+
Sbjct: 579 LTYNILIRAHLGDDDATT--AAELIEEMKSSGFPADVSTVKMVINMLSS-----GELDKS 631
Query: 466 F 466
F
Sbjct: 632 F 632
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 14/172 (8%)
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQ----LGRCKRILSLMIMEGCFPSPGI 372
++A+D M + +P V+ + L + KQ L CK++ S +G S
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMES----KGIAHSIYT 125
Query: 373 FNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAET 432
+ +++ +CR R SYA+ + K++K G +P V++N L+ G+C + + LEL +
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLC--LECRVSEALELVD- 182
Query: 433 AYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
M+E+G + ++ LC GK A +I M+ GF P+ TY
Sbjct: 183 ---RMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTY 231
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 297 VPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILL-CGCLRKKQLGRCK 355
+P I + ++ S + + +E + +M + ++ T I++ C C R ++L
Sbjct: 85 LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFC-RCRKLSYAF 143
Query: 356 RILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
+ ++ G P IFN+L++ C S A +L+ +MV+ G +P + N L+ G+
Sbjct: 144 STMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGL 203
Query: 416 CGNEDLPSMDVL--ELAETAYS---------------------------EMLEVGVVLNK 446
C N + VL + ET + +M E + L+
Sbjct: 204 CLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 447 VNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
V S LC G + AFN+ EM KGF DI TY+
Sbjct: 264 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
>AT4G20090.1 | Symbols: EMB1025 | EMB1025 (embryo defective 1025) |
chr4:10868400-10870382 REVERSE
Length = 660
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 150/315 (47%), Gaps = 14/315 (4%)
Query: 179 DRIPEQ--FLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTY 236
+RI E L E++ E + NVLI C+ G + + + G + +TY
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY 295
Query: 237 NALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLI---EK 293
N L+ KLD A + M + + T G + L K + DA+ L+ E+
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355
Query: 294 EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGR 353
+ + +Y+ +ISGL + EEAM +M C PN+V Y +L+ G R+ +
Sbjct: 356 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNE 415
Query: 354 CKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIG 413
K IL+ MI GC P+ ++SL+ + ++ A ++ K+M K GC Y++LI
Sbjct: 416 AKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLID 475
Query: 414 GICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMM 473
G+CG + ++ A +S+ML +G+ + V S+ + LCG+G + A + EM+
Sbjct: 476 GLCG------VGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Query: 474 SK---GFIPDIGTYS 485
+ PD+ TY+
Sbjct: 530 CQEEPKSQPDVVTYN 544
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 158/331 (47%), Gaps = 16/331 (4%)
Query: 164 NALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGR 223
+ L MIES N+ + E+ L I+ E++ ++ + V+ R Y + L + A++ R
Sbjct: 78 STLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHR 137
Query: 224 LKD-FGYKASRLTYNALVIVFLRAEKLDTA-----YLVHREMSNLGYSMDSFTLGCFAHS 277
+ D F K S ++N+++ V + Y+V+ M N+ S + + +
Sbjct: 138 MVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNM-NMNISPNGLSFNLVIKA 196
Query: 278 LCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPN 334
LCK A+ + + + + +PD Y ++ GLC+ +EA+ L+ M++ C P+
Sbjct: 197 LCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPS 256
Query: 335 VVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLK 394
V Y +L+ G +K L R +++ M ++GC P+ +N+L+H C A LL+
Sbjct: 257 PVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLE 316
Query: 395 KMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFAR 454
+MV C P V Y LI G+ + D + L S M E G LN+ S
Sbjct: 317 RMVSSKCIPNDVTYGTLINGLVKQRR--ATDAVRL----LSSMEERGYHLNQHIYSVLIS 370
Query: 455 CLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
L GK E+A ++ R+M KG P+I YS
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYS 401
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 108/261 (41%), Gaps = 41/261 (15%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI C G + A+ L R+ + +TY L+ ++ + A + M
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
GY ++ L K GK +A++L K + P+ ++Y+ ++ GLC E
Sbjct: 356 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNE 415
Query: 319 AMDFLNRMRANSCIPNVVTYRIL--------LC-------------GCLRKK-------- 349
A + LNRM A+ C+PN TY L LC GC R K
Sbjct: 416 AKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLID 475
Query: 350 ---QLGRCKR---ILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMV---KCG 400
+GR K + S M+ G P ++S++ C A KL +M+ +
Sbjct: 476 GLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPK 535
Query: 401 CQPGYVVYNILIGGICGNEDL 421
QP V YNIL+ G+C +D+
Sbjct: 536 SQPDVVTYNILLDGLCMQKDI 556
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 27/288 (9%)
Query: 98 LISNAILNNDDGFGSKTQKFLRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYS 157
++S+ + ND +G+ ++Q R + L++ + + GY
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM------------------EERGYH 359
Query: 158 HTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAA 217
Q +Y+ L I R++ ++ + + +VL+ C+ G N A
Sbjct: 360 LNQHIYSVL---ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416
Query: 218 LEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHS 277
E L R+ G + TY++L+ F + + A V +EM G S + F
Sbjct: 417 KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476
Query: 278 LCKAGKWRDALTLIEKEEFV---PDTILYTKMISGLCEASLFEEAMDFLNRMRAN---SC 331
LC G+ ++A+ + K + PDT+ Y+ +I GLC + A+ + M
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS 536
Query: 332 IPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHA 379
P+VVTY ILL G +K + R +L+ M+ GC P N+ ++
Sbjct: 537 QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNT 584
>AT1G09820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3190594-3192414 REVERSE
Length = 606
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 160/385 (41%), Gaps = 35/385 (9%)
Query: 121 FREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYS----------HTQA---VYNALL 167
FR+ +S L +P+L ++++ W + S H+ A Y+ +
Sbjct: 71 FRQLISSEL---------DPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIR 121
Query: 168 EMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLL-NVLIRKYCQNGLWNAALEELGRLKD 226
++ N +D I D + ++ ++L+ Y N + E R
Sbjct: 122 SFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGY 181
Query: 227 FGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRD 286
+GYK S L+ L+I L+ + V++EM + FT ++LCK GK
Sbjct: 182 YGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNK 241
Query: 287 ALTLIEKEEFV---PDTILYTKMISGLCE---ASLFEEAMDFLNRMRANSCIPNVVTYRI 340
A ++E + P+ + Y +I G C+ +A L M N PN+ T+ I
Sbjct: 242 ARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNI 301
Query: 341 LLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCG 400
L+ G + L ++ M+ + P+ +NSL++ C S A + KMV G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 401 CQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVG 460
QP + YN LI G C N D+L+ A + + G V + C +G
Sbjct: 362 VQPNLITYNALINGFCKN------DMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLG 415
Query: 461 KFEKAFNVIREMMSKGFIPDIGTYS 485
K + F + EM +G +PD+GTY+
Sbjct: 416 KIDDGFALKEEMEREGIVPDVGTYN 440
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 146/336 (43%), Gaps = 15/336 (4%)
Query: 155 GYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLW 214
G S YN L++ N + L+E+ + D N+LI + ++
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 215 NAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCF 274
+++ + D K + ++YN+L+ K+ A + +M + G + T
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372
Query: 275 AHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSC 331
+ CK ++AL + ++ + VP T +Y +I C+ ++ M
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 332 IPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYK 391
+P+V TY L+ G R + K++ + +G P F+ L+ YCR + A
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAM 491
Query: 392 LLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSN 451
LLK+M K G +P ++ YNI++ G C +L A T +E L ++NV++
Sbjct: 492 LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLK-------AATNMRTQMEKERRL-RMNVAS 543
Query: 452 FARCLCGV---GKFEKAFNVIREMMSKGFIPDIGTY 484
+ L G GK E A ++ EM+ KG +P+ TY
Sbjct: 544 YNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 128/291 (43%), Gaps = 13/291 (4%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAE---KLDTAYLVHR 257
NV+I C+ G N A + + +K +G + ++YN L+ + + K+ A V +
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 258 EMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEAS 314
EM S + T K ++ + ++ ++ P+ I Y +I+GLC
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGG 345
Query: 315 LFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFN 374
EA+ ++M + PN++TY L+ G + L + + +G P+ ++N
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 375 SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAY 434
L+ AYC+ + L ++M + G P YN LI G+C N + +E A+ +
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN------IEAAKKLF 459
Query: 435 SEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
++ G+ + V C G+ KA +++EM G P TY+
Sbjct: 460 DQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509
>AT5G46100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18694316-18695734 REVERSE
Length = 472
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 137/295 (46%), Gaps = 18/295 (6%)
Query: 201 LNVLIRKYCQN-GLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
LNVLI+ C+N G +A L+ + G TY L+ R ++D A + EM
Sbjct: 159 LNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEM 218
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLF 316
+ T + LC + +A+ +E+ + P+ Y+ ++ GLC+
Sbjct: 219 VEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRS 278
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
+AM+ M A C PN+VTY L+ G +++++ +L M ++G P G++ +
Sbjct: 279 LQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKV 338
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNI-------LIGGICGNEDLPSMDVLEL 429
+ +C + A L +M+ G P + +NI ++ G+C N PS
Sbjct: 339 ISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN--YPSR----- 391
Query: 430 AETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
A T Y M G+ + + + +CLC G+F+KA ++ E+++ G IP GT+
Sbjct: 392 AFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTW 446
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 167/382 (43%), Gaps = 17/382 (4%)
Query: 110 FGSKTQKFLRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQI--GYSHTQAVYNALL 167
GSK F ++ + ++ S V +++ K+ E + F A + GY H Q+ + ++
Sbjct: 1 MGSKVMMF--KWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMV 58
Query: 168 EMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDF 227
+ S N + E + +K E+ V +L + R Y + +L ++KDF
Sbjct: 59 LRLVSANKF---KAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDF 115
Query: 228 GYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA 287
S+ Y ++ + + +L+ A+ ++ M +G +L +LC+ DA
Sbjct: 116 DCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDA 175
Query: 288 LTLI----EKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLC 343
I K PD+ Y +ISGLC +EA M C P VVTY L+
Sbjct: 176 GLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLIN 235
Query: 344 GCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
G K + R L M +G P+ ++SL+ C+ A +L + M+ GC+P
Sbjct: 236 GLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRP 295
Query: 404 GYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFE 463
V Y LI G+C + + + +EL + + L+ L +S F C + KF
Sbjct: 296 NMVTYTTLITGLCKEQKI--QEAVELLDRMNLQGLKPDAGLYGKVISGF----CAISKFR 349
Query: 464 KAFNVIREMMSKGFIPDIGTYS 485
+A N + EM+ G P+ T++
Sbjct: 350 EAANFLDEMILGGITPNRLTWN 371
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 159/401 (39%), Gaps = 68/401 (16%)
Query: 70 ISSKEFSFLRDSLLESKFDTGKRSNDAVLISNAILNNDDGFGSKTQKF--LRQFR----- 122
+S+ +F D ++ K + + V+ + +L+ G+G + F LR F
Sbjct: 62 VSANKFKAAEDLIVRMKIE------NCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDF 115
Query: 123 --EKLSESLVAEVLNLVKNPELGIKFFIWAG-RQIGYSHTQAVYNALLEMIESTNNNSND 179
+ ++ V + LV+ +L + F + R+IG T A N L++ + N+ + D
Sbjct: 116 DCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKAL-CRNDGTVD 174
Query: 180 RIPEQFLREIK---DEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTY 236
+ FL K D D G L++ L C+ G + A + + + + +TY
Sbjct: 175 AGLKIFLEMPKRGCDPDSYTYGTLISGL----CRFGRIDEAKKLFTEMVEKDCAPTVVTY 230
Query: 237 NALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---K 293
+L+ ++ +D A EM + G + FT LCK G+ A+ L E
Sbjct: 231 TSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMA 290
Query: 294 EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGR 353
P+ + YT +I+GLC+ +EA++ L+RM P+ Y ++ G +
Sbjct: 291 RGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFRE 350
Query: 354 CKRILSLMIMEGCFP-----------------------------------SPGI------ 372
L MI+ G P S GI
Sbjct: 351 AANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVET 410
Query: 373 FNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIG 413
SLV C+ ++ A +L+ ++V GC P + +LIG
Sbjct: 411 LESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIG 451
>AT3G04760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1303884-1305692 REVERSE
Length = 602
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 129/287 (44%), Gaps = 9/287 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N++I C G + AL+ L +L + + +TY L+ + +D A + EM +
Sbjct: 197 NIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS 256
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV---PDTILYTKMISGLCEASLFEE 318
G D FT +CK G A ++ E PD I Y ++ L +EE
Sbjct: 257 RGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEE 316
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
+ +M + C PNVVTY IL+ R ++ +L LM +G P ++ L+
Sbjct: 317 GEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
A+CR A + L+ M+ GC P V YN ++ +C N + LE+ + ++
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK--ADQALEI----FGKLG 430
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
EVG N + + L G +A ++I EMMS G PD TY+
Sbjct: 431 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYN 477
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 127/284 (44%), Gaps = 10/284 (3%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
+ + C++G + +L L + GY + L+ F + A V + G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAM 320
D F + CK + DA ++++ ++F PDT+ Y MI LC + A+
Sbjct: 155 QP-DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
LN++ +++C P V+TY IL+ + + + +++ M+ G P +N+++
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEV 440
C+ A+++++ + GC+P + YNIL+ L + E E ++M
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRA------LLNQGKWEEGEKLMTKMFSE 327
Query: 441 GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
N V S LC GK E+A N+++ M KG PD +Y
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 127/289 (43%), Gaps = 13/289 (4%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N +IR C+ G+ + A E + L+ G + ++YN L+ L K + + +M +
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
+ T +LC+ GK +A L L++++ PD Y +I+ C +
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDV 386
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A++FL M ++ C+P++V Y +L + + + I + GC P+ +N++
Sbjct: 387 AIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC--GNEDLPSMDVLELAETAYSE 436
A S D A ++ +M+ G P + YN +I +C G D + EL S
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVD----EAFELLVDMRSC 502
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
VV + + F C + E A NV+ M+ G P+ TY+
Sbjct: 503 EFHPSVVTYNIVLLGF----CKAHRIEDAINVLESMVGNGCRPNETTYT 547
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 9/220 (4%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
++LI C++G A+ L +K+ G +Y+ L+ F R +LD A M +
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV---PDTILYTKMISGLCEASLFEE 318
G D +LCK GK AL + K V P++ Y M S L +
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMI-MEGC--FPSPGIFNS 375
A+ + M +N P+ +TY ++ CL ++ G L++ M C PS +N
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMI-SCLCRE--GMVDEAFELLVDMRSCEFHPSVVTYNI 513
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
++ +C++ A +L+ MV GC+P Y +LI GI
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
>AT5G06400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1955959-1959051 FORWARD
Length = 1030
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 159/372 (42%), Gaps = 14/372 (3%)
Query: 113 KTQKFLRQFREKLSESLVAEVLNLVK-NPELGIKFFIWAGRQIGYSHTQAVYNALLEMIE 171
+TQ+ L + + + LV EVL K ++FF W G++ GY H YN +++
Sbjct: 630 RTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAG 689
Query: 172 STNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKA 231
+ R E++ + + ++I +Y + GL N A+ +KD G
Sbjct: 690 CGKDFKQMR---SLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIP 746
Query: 232 SRLTYNALVIVFL--RAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALT 289
S T+ L+ V + ++ A REM G+ D + + LC+ G +DA +
Sbjct: 747 SSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKS 806
Query: 290 LIEKEEFV--PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLR 347
++ + P T+ Y+ I LC EEA+ L + + TY ++ G L+
Sbjct: 807 CLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQ 866
Query: 348 KKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVV 407
+ L + ++ M G P ++ SL+ + + + + +KM C+P V
Sbjct: 867 RGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVT 926
Query: 408 YNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFN 467
Y + ICG S+ +E A A+ M E G + S F CLC K E A
Sbjct: 927 YTAM---ICG---YMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALK 980
Query: 468 VIREMMSKGFIP 479
++ EM+ KG P
Sbjct: 981 LLSEMLDKGIAP 992
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 163/396 (41%), Gaps = 47/396 (11%)
Query: 123 EKLSESLVAEVLNLV-----KNPELGIKFFIWAGRQIGYSHTQAVYNALLEMI-ESTNNN 176
EKLS E++ V K P L ++FF W ++ G+SH +YN +L + E+ N +
Sbjct: 147 EKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLD 206
Query: 177 SNDRIPEQFLREIKDED-------------KEVLGKLL------------------NVLI 205
D + + + D+D + +GK L N++I
Sbjct: 207 MVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMI 266
Query: 206 RKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYS 265
R C G + ALE + + G TY L+ ++EK+D + +M +
Sbjct: 267 RSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEI 326
Query: 266 MDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDF 322
+ G S C +GK ++AL LI + +E D + ++ GLC A+ +A++
Sbjct: 327 SEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEI 386
Query: 323 LNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCR 382
++ M+ + + Y I++ G LR+ + + ++ G P + ++ +
Sbjct: 387 VDIMKRRK-LDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFK 445
Query: 383 SRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGV 442
+ + L +M++ G +P V ++ G G + A +S M E G+
Sbjct: 446 LKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAE------AWKVFSSMEEKGI 499
Query: 443 VLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFI 478
+ S F + LC ++++ + +M + +
Sbjct: 500 KPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIV 535
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 193 DKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTA 252
D+ G +++ L+ Q G AL+++ +K+ G K Y +L++ F + ++L+
Sbjct: 853 DQYTYGSIVHGLL----QRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKV 908
Query: 253 YLVHREMS--NLGYSMDSFT-LGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISG 309
++M + S+ ++T + C SL K + +A +E+ PD Y+K I+
Sbjct: 909 LETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINC 968
Query: 310 LCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLR--KKQLGR 353
LC+A E+A+ L+ M P+ + +R + G R K L R
Sbjct: 969 LCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLAR 1014
>AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING:
F mature embryo stage, petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
26421 Blast hits to 6237 proteins in 192 species: Archae
- 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants -
23373; Viruses - 0; Other Eukaryotes - 1421 (source:
NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 548
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 132/287 (45%), Gaps = 9/287 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N++I +C + AL LG++ GY+ R+T +LV F R ++ A + +M
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
+GY D SLCK + DA IE++ P+ + YT +++GLC +S + +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A L+ M PNV+TY LL ++ ++ K + M+ P ++SL++
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
C A ++ MV GC V YN LI G C + + D ++L + EM
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE--DGMKL----FREMS 357
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ G+V N V + + G +KA +M G PDI TY+
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 147/333 (44%), Gaps = 48/333 (14%)
Query: 191 DEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLD 250
+ D+ +G L+N +C+ + A+ + ++ + GYK + YNA++ + ++++
Sbjct: 152 EPDRVTIGSLVN----GFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 251 TAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK----------------- 293
A+ +E+ G + T + LC + +W DA L+
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 294 ----------------EEFV-----PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCI 332
EE V PD + Y+ +I+GLC +EA + M + C+
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 333 PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKL 392
+VV+Y L+ G + K++ ++ M G + +N+L+ + ++ D A +
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 393 LKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNF 452
+M G P YNIL+GG+C N + LE A + +M + + L+ V +
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGE------LEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 453 ARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
R +C GK E+A+++ + KG PDI TY+
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYT 474
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 124/266 (46%), Gaps = 9/266 (3%)
Query: 223 RLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAG 282
+++ G + T+N ++ F ++ A + +M LGY D T+G + C+
Sbjct: 110 KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRN 169
Query: 283 KWRDALTLIEKE---EFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYR 339
+ DA++L++K + PD + Y +I LC+ +A DF + PNVVTY
Sbjct: 170 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT 229
Query: 340 ILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKC 399
L+ G + R+LS MI + P+ +++L+ A+ ++ A +L ++MV+
Sbjct: 230 ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
Query: 400 GCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGV 459
P V Y+ LI G+C + D ++ A + M+ G + + V+ + C
Sbjct: 290 SIDPDIVTYSSLINGLCLH------DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA 343
Query: 460 GKFEKAFNVIREMMSKGFIPDIGTYS 485
+ E + REM +G + + TY+
Sbjct: 344 KRVEDGMKLFREMSQRGLVSNTVTYN 369
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 140/367 (38%), Gaps = 55/367 (14%)
Query: 153 QIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNG 212
+IGY YNA+++ + T ND F +EI+ + L+ C +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKR-VNDAF--DFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 213 LWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLG 272
W+ A L + + +TY+AL+ F++ K+ A + EM + D T
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYS 299
Query: 273 CFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRAN 329
+ LC + +A L+ + + D + Y +I+G C+A E+ M M
Sbjct: 300 SLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 330 SCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFN--------------- 374
+ N VTY L+ G + + + + S M G P +N
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 375 --------------------SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG 414
+++ C++ A+ L + G +P V Y ++ G
Sbjct: 420 LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Query: 415 ICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMS 474
+C + +L E Y++M + G++ N +S+ G + +I++M+S
Sbjct: 480 LC------TKGLLHEVEALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLS 525
Query: 475 KGFIPDI 481
G+ P +
Sbjct: 526 CGYAPSL 532
>AT4G19900.1 | Symbols: | glycosyl transferase-related |
chr4:10786948-10791433 REVERSE
Length = 1302
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 130/315 (41%), Gaps = 33/315 (10%)
Query: 203 VLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNL 262
+++ C+NGL N A+ ++ D G+K + + + +L+ + + A+ + EM
Sbjct: 858 LILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN 917
Query: 263 GYSMDSFTLGCFAHSLCKAG----KWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
G+ + +T LCK G +R L L+ + + P+ YT MI G C+
Sbjct: 918 GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNR 977
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A +RM+ PNV TY L+ G + GR +++LM EG P+ +N+ +
Sbjct: 978 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 1037
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPS--------------- 423
+ C+ AY+LL K CG + V Y ILI C D+
Sbjct: 1038 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEA 1097
Query: 424 --------------MDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVI 469
++ +E + ++ +G++ K ++ C C G + A
Sbjct: 1098 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYF 1157
Query: 470 REMMSKGFIPDIGTY 484
M G +PD TY
Sbjct: 1158 HNMKRHGCVPDSFTY 1172
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 117/283 (41%), Gaps = 9/283 (3%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
+I YC+ N A R+K+ G + TY L+ +A AY + M + G
Sbjct: 965 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 1024
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIEKE---EFVPDTILYTKMISGLCEASLFEEAM 320
+ + +T SLCK + +A L+ K D + YT +I C+ + +A+
Sbjct: 1025 FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 1084
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
F RM ++ IL+ R+K++ +R+ L++ G P+ + S++ Y
Sbjct: 1085 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCY 1144
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEV 440
C+ D A K M + GC P Y LI G+C +++ A Y M++
Sbjct: 1145 CKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKS------MVDEACKLYEAMIDR 1198
Query: 441 GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGT 483
G+ +V A C A ++ + K +I + T
Sbjct: 1199 GLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRT 1241
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 105/281 (37%), Gaps = 68/281 (24%)
Query: 273 CFAHSLCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRAN 329
C + + G+ +A+ ++ + + P +I ++ E L E A + + M
Sbjct: 753 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVR 812
Query: 330 SCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPS-------------------- 369
+P+ +Y++++ GC R ++ R L+ MI G P
Sbjct: 813 GVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRA 872
Query: 370 -------------PGI--FNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG 414
P + F SL+ C+ A+++L++MV+ G +P + LI G
Sbjct: 873 IWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 932
Query: 415 ICGN-----------------------EDLPSM-------DVLELAETAYSEMLEVGVVL 444
+C SM D L AE +S M E G+
Sbjct: 933 LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 992
Query: 445 NKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
N + C G F +A+ ++ M +GF+P+I TY+
Sbjct: 993 NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYN 1033
>AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 828
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 134/322 (41%), Gaps = 44/322 (13%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N ++ C++G + AL+ L ++++ KA TY+ ++ R +D A + +EM
Sbjct: 187 NSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMET 246
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
G T LCKAGKW D L++ E VP+ I + ++ + +E
Sbjct: 247 KGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQE 306
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A + M PN++TY L+ G + +L +L LM+ C P F SL+
Sbjct: 307 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 366
Query: 379 AYC-----------------------------------RSRDYSYAYKLLKKMVKCGCQP 403
YC +S A +L ++MV G P
Sbjct: 367 GYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 426
Query: 404 GYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFE 463
+ Y IL+ G+C N L LE+ E +++G+V+ + +C GK E
Sbjct: 427 DVMTYGILLDGLCDNGKLEK--ALEIFEDLQKSKMDLGIVM----YTTIIEGMCKGGKVE 480
Query: 464 KAFNVIREMMSKGFIPDIGTYS 485
A+N+ + KG P++ TY+
Sbjct: 481 DAWNLFCSLPCKGVKPNVMTYT 502
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 131/286 (45%), Gaps = 9/286 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI+ G + A+ + R+ + G + +TYN++V R+ A + R+M
Sbjct: 152 NTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 211
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
D FT SLC+ G A++L +E + + Y ++ GLC+A + +
Sbjct: 212 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 271
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
L M + +PNV+T+ +LL +++ +L + MI G P+ +N+L+
Sbjct: 272 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 331
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
YC S A +L MV+ C P V + LI G C + ++ + +
Sbjct: 332 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC------MVKRVDDGMKVFRNIS 385
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+ G+V N V S + C GK + A + +EM+S G +PD+ TY
Sbjct: 386 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 431
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 3/200 (1%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
LI+ YC + ++ + G A+ +TY+ LV F ++ K+ A + +EM + G
Sbjct: 364 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 423
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAM 320
D T G LC GK AL + E K + ++YT +I G+C+ E+A
Sbjct: 424 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 483
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
+ + PNV+TY +++ G +K L +L M +G P+ +N+L+ A+
Sbjct: 484 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 543
Query: 381 CRSRDYSYAYKLLKKMVKCG 400
R D + + KL+++M CG
Sbjct: 544 LRDGDLTASAKLIEEMKSCG 563
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 119/317 (37%), Gaps = 44/317 (13%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N L+R C+ G WN L + + +T+N L+ VF++ KL A +++EM
Sbjct: 257 NSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 316
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
G S + T C + +A L L+ + + PD + +T +I G C ++
Sbjct: 317 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 376
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFP---SPGI--- 372
M + + N VTY IL+ G + ++ + + M+ G P + GI
Sbjct: 377 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLD 436
Query: 373 -----------------------------FNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
+ +++ C+ A+ L + G +P
Sbjct: 437 GLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 496
Query: 404 GYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFE 463
+ Y ++I G+C L ++L +M E G N + R G
Sbjct: 497 NVMTYTVMISGLCKKGSLSEANIL------LRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 550
Query: 464 KAFNVIREMMSKGFIPD 480
+ +I EM S GF D
Sbjct: 551 ASAKLIEEMKSCGFSAD 567
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 77/153 (50%), Gaps = 6/153 (3%)
Query: 333 PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKL 392
P+ T+ L+ G + ++ ++ M+ GC P +NS+V+ CRS D S A L
Sbjct: 146 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 205
Query: 393 LKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNF 452
L+KM + + Y+ +I +C + ++ A + + EM G+ + V ++
Sbjct: 206 LRKMEERNVKADVFTYSTIIDSLCRD------GCIDAAISLFKEMETKGIKSSVVTYNSL 259
Query: 453 ARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
R LC GK+ ++++M+S+ +P++ T++
Sbjct: 260 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 292
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 71/169 (42%), Gaps = 6/169 (3%)
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
++A+ M + +P++V + R KQ + + G + N +
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
++ +CR +AY +L K++K G +P +N LI G+ + VL
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL------VDR 173
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
M+E G + V ++ +C G A +++R+M + D+ TYS
Sbjct: 174 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 222
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE
Length = 590
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 149/338 (44%), Gaps = 15/338 (4%)
Query: 153 QIGYSHTQAVYNALLEMIESTNNNSND-RIPEQFLREIKDEDKEVLGKLLNVLIRKYCQN 211
++GY + L+ + N S + E+ + + D G ++N L C+
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL----CKR 228
Query: 212 GLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTL 271
G + AL L +++ +A + YN ++ + + +D A+ + +M G D FT
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 272 GCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRM-R 327
LC G+W DA L+ ++ PD + + +I + EA + M +
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 328 ANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYS 387
+ C P+VV Y L+ G + K++ + M G + + +L+H + ++RD
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCD 408
Query: 388 YAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKV 447
A + K+MV G P + YNIL+ G+C N + +E A + M + + L+ V
Sbjct: 409 NAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN------VETALVVFEYMQKRDMKLDIV 462
Query: 448 NVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ LC GK E +++ + KG P++ TY+
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 128/289 (44%), Gaps = 10/289 (3%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
LN L+ +C + A+ + ++ + GY+ +T+ LV + K A + M
Sbjct: 148 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV 207
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFE 317
G D T G + LCK G+ AL L+ EK + D ++Y +I GLC+ +
Sbjct: 208 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMD 267
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
+A D N+M P+V TY L+ + R+LS M+ + P FN+L+
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
Query: 378 HAYCRSRDYSYAYKLLKKMVKC-GCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
A+ + A KL +MVK C P V YN LI G C + +E + E
Sbjct: 328 DAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR------VEEGMEVFRE 381
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
M + G+V N V + + A V ++M+S G PDI TY+
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN 430
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 3/202 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI+ +C+ +E + G + +TY L+ F +A D A +V ++M +
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 419
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
G D T LC G AL + E K + D + YT MI LC+A E+
Sbjct: 420 DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVED 479
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
D + PNVVTY ++ G RK + M +G P+ G +N+L+
Sbjct: 480 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIR 539
Query: 379 AYCRSRDYSYAYKLLKKMVKCG 400
A R D + + +L+K+M CG
Sbjct: 540 ARLRDGDEAASAELIKEMRSCG 561
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 127/281 (45%), Gaps = 9/281 (3%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
L RK Q+ + A+ G + S + ++ L+ + K D + +M NLG
Sbjct: 46 LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 105
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIEKE---EFVPDTILYTKMISGLCEASLFEEAM 320
S + +T F + C+ + AL ++ K + P + +++G C + EA+
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 165
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
+++M P+ VT+ L+ G + + ++ M+++GC P + ++++
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEV 440
C+ + A LL KM K + V+YN +I G+C + + D +L +++M
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMD--DAFDL----FNKMETK 279
Query: 441 GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDI 481
G+ + + CLC G++ A ++ +M+ K PD+
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 122/296 (41%), Gaps = 33/296 (11%)
Query: 223 RLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAG 282
++++ G + TY+ + F R +L A + +M LGY TL + C
Sbjct: 100 QMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 159
Query: 283 KWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYR 339
+ +A+ L+++ + PDT+ +T ++ GL + + EA+ + RM C P++VTY
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 219
Query: 340 ILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKC 399
++ G ++ + +L+ M I+N+++ C+ + A+ L KM
Sbjct: 220 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
Query: 400 GCQPGYVVYNILIGGICG-------------------NEDLPSMDV----------LELA 430
G +P YN LI +C N DL + L A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 431 ETAYSEMLEVGVVLNKVNVSN-FARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
E Y EM++ V N + C + E+ V REM +G + + TY+
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYT 395
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 96/243 (39%), Gaps = 48/243 (19%)
Query: 283 KWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYR 339
K DA+ L + K P + ++K++S + + + F+ + +M+ N+ TY
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 340 ILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKC 399
I + R+ QL IL M+ G PS NSL++ +C S A L+ +MV+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 400 -----------------------------------GCQPGYVVYNILIGGIC--GNEDLP 422
GCQP V Y +I G+C G DL
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL- 233
Query: 423 SMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIG 482
L L +E VV+ + LC + AF++ +M +KG PD+
Sbjct: 234 ---ALNLLNKMEKGKIEADVVIYNTIIDG----LCKYKHMDDAFDLFNKMETKGIKPDVF 286
Query: 483 TYS 485
TY+
Sbjct: 287 TYN 289
>AT5G41170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16478860-16480443 REVERSE
Length = 527
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 129/288 (44%), Gaps = 12/288 (4%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
LI +C A+ + ++ + G K + Y ++ + ++ A + +M N G
Sbjct: 148 LINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYG 207
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAM 320
D + LC +G+WRDA +L+ K + PD I + +I + F +A
Sbjct: 208 IRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAE 267
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
+ N M S PN+ TY L+ G + + +++ LM +GCFP + SL++ +
Sbjct: 268 ELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEV 440
C+ + A K+ +M + G + Y LI G G P+ +A+ +S M+
Sbjct: 328 CKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF-GQVGKPN-----VAQEVFSHMVSR 381
Query: 441 GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSK---GFIPDIGTYS 485
GV N + CLC GK +KA + +M + G P+I TY+
Sbjct: 382 GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 126/288 (43%), Gaps = 12/288 (4%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
L+ C +G W A L + K +T+NAL+ F++ K A ++ EM +
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 264 YSMDSFTLGCFAHSLCKAG---KWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAM 320
+ + FT + C G + R L+E + PD + YT +I+G C+ ++AM
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
M N +TY L+ G + + + + S M+ G P+ +N L+H
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCL 397
Query: 381 CRSRDYSYAYKLLKKMVKC---GCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
C + A + + M K G P YN+L+ G+C N L E A + +M
Sbjct: 398 CYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKL------EKALMVFEDM 451
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ + + + + + +C GK + A N+ + SKG P++ TY+
Sbjct: 452 RKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYT 499
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 126/298 (42%), Gaps = 19/298 (6%)
Query: 201 LNVLIRKYC------QNGL----WNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLD 250
L+ +R +C +NGL +N AL+ + + S + + L+ V + +K D
Sbjct: 30 LSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFD 89
Query: 251 TAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE---EFVPDTILYTKMI 307
+ + +G S D +T + C++ + A + + K F PD + +T +I
Sbjct: 90 VVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLI 149
Query: 308 SGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCF 367
+G C + EEAM +N+M P+VV Y ++ + + + M G
Sbjct: 150 NGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIR 209
Query: 368 PSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVL 427
P ++ SLV+ C S + A LL+ M K +P + +N LI
Sbjct: 210 PDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLD---- 265
Query: 428 ELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
AE Y+EM+ + + N ++ C G ++A + M +KG PD+ Y+
Sbjct: 266 --AEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYT 321
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 6/152 (3%)
Query: 203 VLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNL 262
LI+ + Q G N A E + G + TYN L+ K+ A ++ +M
Sbjct: 357 TLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Query: 263 ---GYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLF 316
G + + +T H LC GK AL + E K E I YT +I G+C+A
Sbjct: 417 EMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKV 476
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRK 348
+ A++ + + PNVVTY ++ G R+
Sbjct: 477 KNAVNLFCSLPSKGVKPNVVTYTTMISGLFRE 508
>AT5G65560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26201012-26203759 REVERSE
Length = 915
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 138/315 (43%), Gaps = 33/315 (10%)
Query: 191 DEDKEVLGKLL-----------NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNAL 239
++ +E+LG++L N LI YC+ G+ A++ + ++ + TYN L
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 240 VIVFLRAEKLDTAYLVHREMSNLGYSM------DSFTLGCFAHSLCKAGKWRDA---LTL 290
+ + ++ VH+ M L + D T C++G + A L+L
Sbjct: 435 IKGYCKSN-------VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 291 IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQ 350
+ VPD YT MI LC++ EEA D + + PNVV Y L+ G + +
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 351 LGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNI 410
+ +L M+ + C P+ FN+L+H C A L +KMVK G QP I
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTI 607
Query: 411 LIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIR 470
LI + + D + A + + +ML G + + F + C G+ A +++
Sbjct: 608 LIHRLLKDGD------FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 471 EMMSKGFIPDIGTYS 485
+M G PD+ TYS
Sbjct: 662 KMRENGVSPDLFTYS 676
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 175/426 (41%), Gaps = 63/426 (14%)
Query: 118 LRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLE--------- 168
L+ +S S V+ + +L +P+ + F W + Y H+ Y +LL
Sbjct: 81 LKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVG 140
Query: 169 --------MIESTNNNSNDRIPEQFLREI-KDEDKEVLGKLL----NVLIRKYCQNGLWN 215
MI+S ++ + R++ KDE E+ KL+ N L+ + GL +
Sbjct: 141 VVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVD 200
Query: 216 AALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFA 275
+ + + + TYN +V + + ++ A ++ G D FT
Sbjct: 201 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 260
Query: 276 HSLCKAGKWRDALTLIEKEEFVP---DTILYTKMISGLCEASLFEEAMDFLNRMRANSCI 332
C+ A + + + + YT +I GLC A +EAMD +M+ + C
Sbjct: 261 MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 320
Query: 333 PNVVTYRIL---LCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYA 389
P V TY +L LCG RK + ++ M G P+ + L+ + C + A
Sbjct: 321 PTVRTYTVLIKSLCGSERKSE---ALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKA 377
Query: 390 YKLLKKMVKCGCQPGYVVYNILIGGICGN---EDLPSMDVLELAET--------AYSE-- 436
+LL +M++ G P + YN LI G C ED ++DV+EL E+ Y+E
Sbjct: 378 RELLGQMLEKGLMPNVITYNALINGYCKRGMIED--AVDVVELMESRKLSPNTRTYNELI 435
Query: 437 -----------------MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIP 479
MLE V+ + V ++ C G F+ A+ ++ M +G +P
Sbjct: 436 KGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 480 DIGTYS 485
D TY+
Sbjct: 496 DQWTYT 501
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 108/251 (43%), Gaps = 39/251 (15%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI+ YC++ + + A+ L ++ + +TYN+L+ R+ D+AY + M++
Sbjct: 432 NELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
G D +T SLCK+ + +A L +E++ P+ ++YT +I G C+A +E
Sbjct: 491 RGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDE 550
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRC-----------------------K 355
A L +M + +C+PN +T+ L+ G +L
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIH 610
Query: 356 RIL------------SLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
R+L M+ G P + + + YCR A ++ KM + G P
Sbjct: 611 RLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670
Query: 404 GYVVYNILIGG 414
Y+ LI G
Sbjct: 671 DLFTYSSLIKG 681
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 123/296 (41%), Gaps = 24/296 (8%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
+I C++ A + L+ G + + Y AL+ + +A K+D A+L+ +M +
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV---PDTILYTKMISGLCEASLFEEAM 320
+S T H LC GK ++A L EK + P T +I L + F+ A
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
+M ++ P+ TY + R+ +L + +++ M G P ++SL+ Y
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG---------------ICGNEDLPSMD 425
++A+ +LK+M GC+P + LI +C ++ D
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 426 -VLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMM-SKGFIP 479
V+EL E +M+E V N + +C VG A V M ++G P
Sbjct: 743 TVVELLE----KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISP 794
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 101/274 (36%), Gaps = 61/274 (22%)
Query: 201 LNVLIRKYCQNGLWNAA--LEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
N LI C +G A LEE ++ G + + T L+ L+ D AY ++
Sbjct: 570 FNALIHGLCADGKLKEATLLEE--KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGL----- 310
M + G D+ T F + C+ G+ DA ++ K PD Y+ +I G
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Query: 311 ---------------CEASL---------------------------------FEEAMDF 322
CE S F+ ++
Sbjct: 688 TNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVEL 747
Query: 323 LNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIM-EGCFPSPGIFNSLVHAYC 381
L +M +S PN +Y L+ G L +++ M EG PS +FN+L+ C
Sbjct: 748 LEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCC 807
Query: 382 RSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
+ + ++ A K++ M+ G P +LI G+
Sbjct: 808 KLKKHNEAAKVVDDMICVGHLPQLESCKVLICGL 841
>AT1G12620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4294883-4296748 REVERSE
Length = 621
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 148/337 (43%), Gaps = 14/337 (4%)
Query: 153 QIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVL-GKLLNVLIRKYCQN 211
++G+ T NAL+ + S+ + + E + EV G +L V+ C++
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVM----CKS 225
Query: 212 GLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTL 271
G A+E L ++++ K + Y+ ++ + LD A+ + EM G+ D
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 272 GCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRA 328
C AG+W D L+ K + PD + ++ +I + EA + M
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 329 NSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSY 388
P+ VTY L+ G ++ QL + +L LM+ +GC P+ FN L++ YC++
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 389 AYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVN 448
+L +KM G V YN LI G C + LE+A+ + EM+ V + V+
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFC------ELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 449 VSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
LC G+ EKA + ++ DIG Y+
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYN 496
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 135/321 (42%), Gaps = 44/321 (13%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
+ LI C G + ALE + R+ + G+K + +T NALV K+ A L+ M
Sbjct: 146 STLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE 205
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE-------------------------- 295
G+ + T G +CK+G+ A+ L+ K E
Sbjct: 206 TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
Query: 296 ------------FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLC 343
F D I+YT +I G C A +++ L M P+VV + L+
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Query: 344 GCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
+++ +L + + MI G P + SL+ +C+ A +L MV GC P
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Query: 404 GYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFE 463
+NILI G C + D LEL + +M GVV + V + + C +GK E
Sbjct: 386 NIRTFNILINGYCKANLID--DGLEL----FRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 464 KAFNVIREMMSKGFIPDIGTY 484
A + +EM+S+ PDI +Y
Sbjct: 440 VAKELFQEMVSRRVRPDIVSY 460
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 131/288 (45%), Gaps = 9/288 (3%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
L+++I C+ + A +G++ GY+ +T++ L+ ++ A + M
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFE 317
+G+ TL + LC GK DA+ LI++ F P+ + Y ++ +C++
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
AM+ L +M + V Y I++ G + L + + M ++G I+ +L+
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
+C + + KLL+ M+K P V ++ LI L AE + EM
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE------AEELHKEM 343
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
++ G+ + V ++ C + +KA +++ M+SKG P+I T++
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFN 391
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 3/205 (1%)
Query: 199 KLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
+ N+LI YC+ L + LE ++ G A +TYN L+ F KL+ A + +E
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASL 315
M + D + LC G+ AL + IEK + D +Y +I G+C AS
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
++A D + P+V TY I++ G +K L + M +G P+ +N
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCG 400
L+ A+ D + + KL++++ +CG
Sbjct: 568 LIRAHLGEGDATKSAKLIEEIKRCG 592
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 119/255 (46%), Gaps = 9/255 (3%)
Query: 234 LTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWR---DALTL 290
+ ++ L V R ++ D + ++M G + + +TL + C+ K A+
Sbjct: 73 IDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGK 132
Query: 291 IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQ 350
I K + PDT+ ++ +I+GLC EA++ ++RM P ++T L+ G +
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK 192
Query: 351 LGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNI 410
+ ++ M+ G P+ + ++ C+S + A +LL+KM + + V Y+I
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 411 LIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIR 470
+I G+C + L + A ++EM G + + + R C G+++ ++R
Sbjct: 253 IIDGLCKDGSLDN------AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 471 EMMSKGFIPDIGTYS 485
+M+ + PD+ +S
Sbjct: 307 DMIKRKITPDVVAFS 321
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 145/371 (39%), Gaps = 47/371 (12%)
Query: 153 QIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNG 212
+ G+ + Y +L+++ + + + + LR++++ ++ +++I C++G
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTA---LAMELLRKMEERKIKLDAVKYSIIIDGLCKDG 261
Query: 213 LWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLG 272
+ A ++ G+KA + Y L+ F A + D + R+M + D
Sbjct: 262 SLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFS 321
Query: 273 CFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRAN 329
K GK R+A L + + PDT+ YT +I G C+ + ++A L+ M +
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 330 SCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYA 389
C PN+ T+ IL+ G + + + M + G +N+L+ +C A
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 390 YKLLKKMVKCGCQPGYV-----------------------------------VYNILIGG 414
+L ++MV +P V +YNI+I G
Sbjct: 442 KELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHG 501
Query: 415 ICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMS 474
+C + A + + GV + + LC G +A + R+M
Sbjct: 502 MCNASKVDD------AWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Query: 475 KGFIPDIGTYS 485
G P+ TY+
Sbjct: 556 DGHSPNGCTYN 566
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 10/250 (4%)
Query: 181 IPEQFLREIKDEDKEVLGKLLN-------VLIRKYCQNGLWNAALEELGRLKDFGYKASR 233
+ E LRE ++ KE++ + ++ LI +C+ + A L + G +
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 234 LTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK 293
T+N L+ + +A +D + R+MS G D+ T C+ GK A L ++
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 294 ---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQ 350
PD + Y ++ GLC+ E+A++ ++ + ++ Y I++ G +
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507
Query: 351 LGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNI 410
+ + + ++G P +N ++ C+ S A L +KM + G P YNI
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567
Query: 411 LIGGICGNED 420
LI G D
Sbjct: 568 LIRAHLGEGD 577
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 29/217 (13%)
Query: 298 PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRI 357
P I ++++ S + ++ +D +M N+ T I++ C R ++L
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 358 LSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICG 417
+ +I G P F++L++ C S A +L+ +MV+ G +P + N L+ G+C
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 418 NEDLPSMDVL--ELAETAYS---------------------------EMLEVGVVLNKVN 448
N + +L + ET + +M E + L+ V
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 449 VSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
S LC G + AFN+ EM KGF DI Y+
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYT 286
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
++A+D M + P ++ + L R KQ + M ++G + + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
++ CR R S A+ + K++K G +P V ++ LI G+C + + LEL +
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVS--EALELVD----R 167
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
M+E+G + ++ LC GK A +I M+ GF P+ TY
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216
>AT3G60050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22180231-22181652 REVERSE
Length = 473
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 195/457 (42%), Gaps = 43/457 (9%)
Query: 49 DLEGLFDPEDPMSLDNSRMESISSKEFSFLRDSLLESKFDTGKRSNDAVLISNAILNNDD 108
DL+ FD + +S + SI + S +R LES + R VL++ + ++
Sbjct: 41 DLDCGFDEDSNIS----ELRSIDREVIS-VRSRFLESANHSASR----VLVTLQL--DES 89
Query: 109 GFGSKTQKFLRQFREKLSESLVAEVL----------NLVKNPELGIKFFIWAGRQIGYSH 158
GF SK+ L + ++S LV EVL N + +L +FF+W+G Q + H
Sbjct: 90 GFNSKS--VLDELNVRVSGLLVREVLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRH 147
Query: 159 TQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAAL 218
T Y+ L+++ + + + E+ + + N+LI + GL A+
Sbjct: 148 TVNSYHLLMKIFAECGEY---KAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAV 204
Query: 219 EELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFA--- 275
+ + K F Y+ + +YNA++ L ++ V+++M G+S D T
Sbjct: 205 VQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTN 264
Query: 276 HSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNV 335
+ L K ++ + ++ F PD+ Y ++ L + + A+ LN M+ P+V
Sbjct: 265 YRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSV 324
Query: 336 VTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKK 395
+ Y L+ G R L CK L M+ GC P + ++ Y S + A ++ ++
Sbjct: 325 LHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFRE 384
Query: 396 MVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAY--SEMLEVGVVLNKVNVSNFA 453
M G P YN +I G+C E E + EM G N V S
Sbjct: 385 MTVKGQLPNVFTYNSMIRGLCMAG--------EFREACWLLKEMESRGCNPNFVVYSTLV 436
Query: 454 RCLCGVGKFEKAFNVIREMMSKG----FIPDIGTYSK 486
L GK +A VIREM+ KG +P + Y +
Sbjct: 437 SYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKYRR 473
>AT4G20740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11126151-11128334 FORWARD
Length = 727
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 161/381 (42%), Gaps = 22/381 (5%)
Query: 96 AVLISNAILNNDDGFGSKTQKFLRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIG 155
A + +A N + +G L + R +++ S+VAEVL L + + KFF WAG+Q G
Sbjct: 95 ARFVLDAFRKNRNHWGPSVVSELNKLR-RVTPSIVAEVLKLGNDAAVAAKFFHWAGKQKG 153
Query: 156 YSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWN 215
Y H A YNA + N N + R +Q + + + K +LIR + N
Sbjct: 154 YKHDFAAYNAFAYCL---NRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGL 210
Query: 216 AALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFA 275
++K FG+K YN ++ ++ D A V+ + G +S T
Sbjct: 211 RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILV 270
Query: 276 HSLCKAGKWRDALTLIE--KEEFV-PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCI 332
LCKAG+ + L +++ +E PD YT MI L + ++ + MR +
Sbjct: 271 KGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIK 330
Query: 333 PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKL 392
P+V+ Y L+ G + ++ R + M + I+ L+ + A L
Sbjct: 331 PDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNL 390
Query: 393 LKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLE-----------VG 441
+ +V G +YN +I G+C + +L + A E LE
Sbjct: 391 WEDLVDSGYIADIGIYNAVIKGLCSVNQVDK--AYKLFQVAIEEELEPDFETLSPIMVAY 448
Query: 442 VVLNKVNVSNFARCLCGVGKF 462
VV+N+ +S+F+ L +G+
Sbjct: 449 VVMNR--LSDFSNVLERIGEL 467
>AT4G19440.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10602006-10604483 REVERSE
Length = 825
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 135/294 (45%), Gaps = 15/294 (5%)
Query: 198 GKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHR 257
G LL LI C++G + ALE + + G+ T NAL+ A KLD A+ + +
Sbjct: 470 GGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQK 529
Query: 258 EMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEAS 314
E+ G MD + C K +A ++ K PD Y+ +I GL +
Sbjct: 530 EILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMN 589
Query: 315 LFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFN 374
EEA+ F + + N +P+V TY +++ GC + ++ + M+ + P+ ++N
Sbjct: 590 KVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYN 649
Query: 375 SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAY 434
L+ AYCRS S A +L + M G P Y LI G + + +E A+ +
Sbjct: 650 HLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG------MSIISRVEEAKLLF 703
Query: 435 SEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNV---IREMMSKGFIPDIGTYS 485
EM G+ + NV ++ + G GK + V +REM SK P+ TY+
Sbjct: 704 EEMRMEGL---EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYT 754
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 15/297 (5%)
Query: 193 DKEVLGKLLNVLIRKYC----QNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEK 248
D+E+ K+ ++LI YC ++G + AL+ L + G S+ T N L+ +RA +
Sbjct: 183 DEEIRRKMSDLLIEVYCTQFKRDGCY-LALDVFPVLANKGMFPSKTTCNILLTSLVRANE 241
Query: 249 LDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTK 305
+ G S D + ++ CK GK +A+ L K E P+ + +
Sbjct: 242 FQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNT 300
Query: 306 MISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEG 365
+I GL ++EA F +M P ++TY IL+ G R K++G +L M +G
Sbjct: 301 VIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG 360
Query: 366 CFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMD 425
P+ ++N+L+ ++ + + A ++ MV G YN LI G C N +
Sbjct: 361 FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN-- 418
Query: 426 VLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIG 482
AE EML +G +N+ + ++ LC F+ A + EM+ + P G
Sbjct: 419 ----AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGG 471
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 125/289 (43%), Gaps = 9/289 (3%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
L I +C+ G A++ ++++ G + +T+N ++ + D A++ +M
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLF 316
G T L +A + DA L + K+ F P+ I+Y +I EA
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
+A++ + M + TY L+ G + Q +R+L M+ G + G F S+
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
+ C + A + + +M+ PG + LI G+C + LEL + +
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK--HSKALEL----WFQ 495
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
L G V++ + LC GK ++AF + +E++ +G + D +Y+
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 544
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 115/264 (43%), Gaps = 15/264 (5%)
Query: 228 GYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA 287
G+ + + YN L+ F+ A L+ A + M + G S+ S T CK G+ +A
Sbjct: 360 GFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNA 419
Query: 288 LTLIEKE---EFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCG 344
L+++ F + +T +I LC +F+ A+ F+ M + P L+ G
Sbjct: 420 ERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 479
Query: 345 CLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPG 404
+ + + + + +G N+L+H C + A+++ K+++ GC
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Query: 405 YVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGV---GK 461
V YN LI G CG + L A EM++ G+ K + ++ +CG+ K
Sbjct: 540 RVSYNTLISGCCGKKKLDE------AFMFLDEMVKRGL---KPDNYTYSILICGLFNMNK 590
Query: 462 FEKAFNVIREMMSKGFIPDIGTYS 485
E+A + G +PD+ TYS
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYS 614
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 110/293 (37%), Gaps = 52/293 (17%)
Query: 202 NVLIRKYCQNGLWNAAL----EELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHR 257
N L+ C+ G + A E LGR G R++YN L+ +KLD A++
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGR----GCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564
Query: 258 EMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEAS 314
EM G D++T L K +A+ + + +PD Y+ MI G C+A
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624
Query: 315 LFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLG---------------------- 352
EE +F + M + + PN V Y L+ R +L
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684
Query: 353 -------------RCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKC 399
K + M MEG P+ + +L+ Y + LL++M
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744
Query: 400 GCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNF 452
P + Y ++IGG + ++ A +EM E G+V + + F
Sbjct: 745 NVHPNKITYTVMIGGYARDGNVTE------ASRLLNEMREKGIVPDSITYKEF 791
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 3/169 (1%)
Query: 183 EQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIV 242
++F E+ ++ + + N LIR YC++G + ALE +K G + TY +L+
Sbjct: 630 QEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG 689
Query: 243 FLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPD 299
+++ A L+ EM G + F K G+ L+ + + P+
Sbjct: 690 MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 749
Query: 300 TILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRK 348
I YT MI G EA LN MR +P+ +TY+ + G L++
Sbjct: 750 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 3/183 (1%)
Query: 235 TYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE-- 292
TY+ ++ +AE+ + EM + ++ + C++G+ AL L E
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 293 -KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQL 351
+ P++ YT +I G+ S EEA MR PNV Y L+ G + Q+
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 352 GRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
+ + +L M + P+ + ++ Y R + + A +LL +M + G P + Y
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEF 791
Query: 412 IGG 414
I G
Sbjct: 792 IYG 794
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 3/165 (1%)
Query: 230 KASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALT 289
+ + + YN L+ + R+ +L A + +M + G S +S T + + +A
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 290 LIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCL 346
L E+ E P+ YT +I G + + L M + + PN +TY +++ G
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 347 RKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYK 391
R + R+L+ M +G P + ++ Y + A+K
Sbjct: 762 RDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
>AT5G18950.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6328519-6329970 REVERSE
Length = 483
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 140/291 (48%), Gaps = 15/291 (5%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
LL ++ + GL A+E LKD G +S +T N++++ L+A KLD + +H+EM
Sbjct: 147 LLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEM 206
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLF 316
+ DS + C +LC G + L++ K+ P +Y K+ISG CE +
Sbjct: 207 --VESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNY 264
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCG-CLRKKQL-GRCKRILSLMIMEGCFPSPGIFN 374
+ L+ M A + P++ Y+ ++ G C+ KKQL C I + +G P ++
Sbjct: 265 ACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYC--IFKNLKDKGYAPDRVVYT 322
Query: 375 SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAY 434
+++ +C A KL +M+K G +P YN++I G + + L E Y
Sbjct: 323 TMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGE------ISLVEAFY 376
Query: 435 SEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+EML G ++ + + C GK ++AF + + M G P+ TY+
Sbjct: 377 NEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYN 427
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 16/230 (6%)
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEA 319
SN Y+ +L +L + A + ++ F P+ L + + L E L EEA
Sbjct: 105 SNYDYTPGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEA 164
Query: 320 MDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHA 379
++ N ++ +VVT +L GCL+ ++L R + M+ E F S I L+ A
Sbjct: 165 IEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMV-ESEFDSERI-RCLIRA 222
Query: 380 YCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLE 439
C D S Y+LLK+ +K G PG VY LI G C + M SE+L
Sbjct: 223 LCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACM----------SEVLH 272
Query: 440 VGVVLNKVN----VSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ N + LC K +A+ + + + KG+ PD Y+
Sbjct: 273 TMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYT 322
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 88/233 (37%), Gaps = 7/233 (3%)
Query: 183 EQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIV 242
+Q L++ D + V KL I +C+ G + E L + + + S Y ++
Sbjct: 237 KQGLKQGLDPGQYVYAKL----ISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKG 292
Query: 243 FLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPD 299
+K AY + + + + GY+ D C+ G A L + K+ P+
Sbjct: 293 LCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPN 352
Query: 300 TILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILS 359
Y MI G + F N M N +++ ++ G + I
Sbjct: 353 EFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFK 412
Query: 360 LMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILI 412
M G P+ +N+L+ +C+ KL K++ G +P + Y L+
Sbjct: 413 NMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
>AT5G02860.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:654102-656561 FORWARD
Length = 819
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 178/430 (41%), Gaps = 45/430 (10%)
Query: 68 ESISSKEFSFLRDSLLESKFDTGKRSNDAVLISNAILNNDDGFGSKTQKFLRQ--FREKL 125
ES SS+ +FL+ KFD R+ D F++Q ++ L
Sbjct: 132 ESTSSELLAFLKGLGFHKKFDLALRAFDW--------------------FMKQKDYQSML 171
Query: 126 SESLVAEVLNLV-KNPELGIKFFIWAGRQ-IGYSHTQAVYNALLEMIESTNNNSNDRIPE 183
S+VA +++++ K + ++ G Q G+S Y +L I + N+ R
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSL---ISAFANSGRYREAV 228
Query: 184 QFLREIKDEDKEVLGKLLNVLIRKYCQNGL-WNAALEELGRLKDFGYKASRLTYNALVIV 242
++++++ + NV++ + + G WN + ++K G TYN L+
Sbjct: 229 NVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC 288
Query: 243 FLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPD 299
R A V EM G+S D T K+ + ++A+ ++ + F P
Sbjct: 289 CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS 348
Query: 300 TILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILS 359
+ Y +IS + +EAM+ N+M P+V TY LL G R ++ I
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFE 408
Query: 360 LMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNE 419
M GC P+ FN+ + Y ++ K+ ++ CG P V +N L+ + G
Sbjct: 409 EMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL-AVFGQN 467
Query: 420 DLPSMDVLELAETAYSEMLEVGVVLNKVN----VSNFARCLCGVGKFEKAFNVIREMMSK 475
+ S + EM G V + +S ++RC G FE+A V R M+
Sbjct: 468 GMDSE-----VSGVFKEMKRAGFVPERETFNTLISAYSRC----GSFEQAMTVYRRMLDA 518
Query: 476 GFIPDIGTYS 485
G PD+ TY+
Sbjct: 519 GVTPDLSTYN 528
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 131/322 (40%), Gaps = 44/322 (13%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N L+ + QNG+ + +K G+ R T+N L+ + R + A V+R M +
Sbjct: 458 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMI----------- 307
G + D T +L + G W + L +E P+ + Y ++
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGL 577
Query: 308 ---------SGLCEA---------------SLFEEAMDFLNRMRANSCIPNVVTYRILLC 343
SG+ E L EA + ++ P++ T ++
Sbjct: 578 MHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637
Query: 344 GCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
R++ + + +L M G PS +NSL++ + RS D+ + ++L++++ G +P
Sbjct: 638 IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697
Query: 404 GYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFE 463
+ YN +I C N + A +SEM G+V + + + F FE
Sbjct: 698 DIISYNTVIYAYCRNTRMRD------ASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFE 751
Query: 464 KAFNVIREMMSKGFIPDIGTYS 485
+A V+R M+ G P+ TY+
Sbjct: 752 EAIGVVRYMIKHGCRPNQNTYN 773
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 6/194 (3%)
Query: 192 EDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDT 251
E + VL K L VL+ C L A LK+ G+ T N++V ++ R + +
Sbjct: 591 EPRAVLLKTL-VLVCSKCD--LLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAK 647
Query: 252 AYLVHREMSNLGY--SMDSFTLGCFAHSLCKA-GKWRDALTLIEKEEFVPDTILYTKMIS 308
A V M G+ SM ++ + HS GK + L I + PD I Y +I
Sbjct: 648 ANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIY 707
Query: 309 GLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFP 368
C + +A + MR + +P+V+TY + ++ MI GC P
Sbjct: 708 AYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRP 767
Query: 369 SPGIFNSLVHAYCR 382
+ +NS+V YC+
Sbjct: 768 NQNTYNSIVDGYCK 781
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/253 (19%), Positives = 95/253 (37%), Gaps = 38/253 (15%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTY------------------------- 236
N ++ + G+W + + L ++D K + LTY
Sbjct: 528 NTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYS 587
Query: 237 ----------NALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCK---AGK 283
LV+V + + L A E+ G+S D TL + K
Sbjct: 588 GVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAK 647
Query: 284 WRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLC 343
L +++ F P Y ++ ++ F ++ + L + A P++++Y ++
Sbjct: 648 ANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIY 707
Query: 344 GCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
R ++ RI S M G P +N+ + +Y + A +++ M+K GC+P
Sbjct: 708 AYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRP 767
Query: 404 GYVVYNILIGGIC 416
YN ++ G C
Sbjct: 768 NQNTYNSIVDGYC 780
>AT1G74580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28020777-28023068 FORWARD
Length = 763
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 122/287 (42%), Gaps = 9/287 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI C+N + A LG++ + G + TYN L+ + + + A + +
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVF 349
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
G+ D FT LC G+ AL L + + P+ ILY +I GL + E
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A N M IP V T+ IL+ G + + ++ +MI +G FP FN L+H
Sbjct: 410 AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
Y A ++L M+ G P YN L+ G+C DV+E Y M+
Sbjct: 470 GYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE--DVME----TYKTMV 523
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
E G N + LC K ++A ++ EM +K PD T+
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFG 570
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 126/270 (46%), Gaps = 9/270 (3%)
Query: 219 EELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSL 278
E G++ G T+N L+ V + + + ++ G + FT F L
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 279 CKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNV 335
C+ G+ A+ ++ ++ PD I Y +I GLC+ S F+EA +L +M P+
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 336 VTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKK 395
TY L+ G + + +RI+ + G P + SL+ C + + A L +
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 396 MVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARC 455
+ G +P ++YN LI G+ N+ + +LE A+ A +EM E G++ +
Sbjct: 382 ALGKGIKPNVILYNTLIKGL-SNQGM----ILEAAQLA-NEMSEKGLIPEVQTFNILVNG 435
Query: 456 LCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
LC +G A +++ M+SKG+ PDI T++
Sbjct: 436 LCKMGCVSDADGLVKVMISKGYFPDIFTFN 465
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 120/316 (37%), Gaps = 33/316 (10%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
LI C G N AL G K + + YN L+ + A + EMS G
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAM 320
+ T + LCK G DA L++ + + PD + +I G E A+
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
+ L+ M N P+V TY LL G + + M+ +GC P+ FN L+ +
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDL------------------- 421
CR R A LL++M P V + LI G C N DL
Sbjct: 542 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 601
Query: 422 -PSMDVL----------ELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIR 470
P+ +++ +AE + EM++ + + C G + +
Sbjct: 602 TPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLL 661
Query: 471 EMMSKGFIPDIGTYSK 486
EMM GFIP + T +
Sbjct: 662 EMMENGFIPSLTTLGR 677
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 132/336 (39%), Gaps = 60/336 (17%)
Query: 195 EVLGK-------LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAE 247
E LGK L N LI+ G+ A + + + G T+N LV +
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Query: 248 KLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYT 304
+ A + + M + GY D FT H K +AL +++ PD Y
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYN 500
Query: 305 KMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIME 364
+++GLC+ S FE+ M+ M C PN+ T+ ILL R ++L +L M +
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Query: 365 GCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMV--------------------------- 397
P F +L+ +C++ D AY L +KM
Sbjct: 561 SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTM 620
Query: 398 ----------KCGCQPGYVVYNILIGGIC--GNEDLPSMDVLELAETAY-SEMLEVGVVL 444
+C GY Y +++ G C GN +L +LE+ E + + +G V+
Sbjct: 621 AEKLFQEMVDRCLGPDGYT-YRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVI 679
Query: 445 NKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
N CLC + +A +I M+ KG +P+
Sbjct: 680 N---------CLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 142/357 (39%), Gaps = 42/357 (11%)
Query: 130 VAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREI 189
V V+ K+P ++ F +++G+ HT + Y ++ IE E+ L ++
Sbjct: 10 VTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSV---IEKLGYYGKFEAMEEVLVDM 66
Query: 190 KDE-DKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEK 248
++ +L + ++ Y + G A+ R+ + + + +YNA++ V + +
Sbjct: 67 RENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGY 126
Query: 249 LDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMIS 308
D A+ V+ M + G + PD +T +
Sbjct: 127 FDQAHKVYMRMRDRGIT--------------------------------PDVYSFTIRMK 154
Query: 309 GLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFP 368
C+ S A+ LN M + C NVV Y ++ G + + M+ G
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 369 SPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLE 428
FN L+ C+ D KLL K++K G P YN+ I G+C +L
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDG----- 269
Query: 429 LAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
A ++E G + + +N LC KF++A + +M+++G PD TY+
Sbjct: 270 -AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
>AT1G62720.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G62680.1); Has 25425
Blast hits to 6071 proteins in 187 species: Archae - 4;
Bacteria - 14; Metazoa - 596; Fungi - 591; Plants -
23031; Viruses - 0; Other Eukaryotes - 1189 (source:
NCBI BLink). | chr1:23227574-23229031 FORWARD
Length = 485
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 133/311 (42%), Gaps = 29/311 (9%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
LI +CQ A++ + ++++ G++ + YN ++ + ++ A + M G
Sbjct: 145 LINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDG 204
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAM 320
D+ T LC +G+W DA L+ + VP+ I +T +I + F EAM
Sbjct: 205 VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAM 264
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
M P+V TY L+ G ++ K++L LM+ +GC P +N+L++ +
Sbjct: 265 KLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGF 324
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI-------CGNEDLPSMDV------- 426
C+S+ KL ++M + G + YN +I G E MD
Sbjct: 325 CKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTY 384
Query: 427 ------------LELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMS 474
+E A + M + + L+ + +C +G E A+++ R +
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444
Query: 475 KGFIPDIGTYS 485
KG PD+ +Y+
Sbjct: 445 KGLKPDVVSYT 455
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 9/254 (3%)
Query: 235 TYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE 294
+YN ++ R + A V +M GY D T+ + C+ + DA+ L+ K
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 295 E---FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQL 351
E F PD ++Y +I G C+ L +A++ +RM + + VTY L+ G +
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 352 GRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
R++ M+M P+ F +++ + + +S A KL ++M + P YN L
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 412 IGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIRE 471
I G+C + + A+ M+ G + + V + C + ++ + RE
Sbjct: 286 INGLCMHGRVDE------AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 472 MMSKGFIPDIGTYS 485
M +G + D TY+
Sbjct: 340 MAQRGLVGDTITYN 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 108/277 (38%), Gaps = 41/277 (14%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N L+ C +G W+ A + + + +T+ A++ VF++ K A ++ EM+
Sbjct: 213 NSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR 272
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
D FT + LC G+ +A L L+ + +PD + Y +I+G C++ +E
Sbjct: 273 RCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDE 332
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILS------------------- 359
M + + +TY ++ G + + + I S
Sbjct: 333 GTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLC 392
Query: 360 --------LMIMEGCFPSP-----GIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYV 406
L++ E S +N ++H C+ + A+ L + + G +P V
Sbjct: 393 MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVV 452
Query: 407 VYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVV 443
Y +I G C D+L Y +M E G++
Sbjct: 453 SYTTMISGFCRKRQWDKSDLL------YRKMQEDGLL 483
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 98/224 (43%), Gaps = 4/224 (1%)
Query: 180 RIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNAL 239
++ E+ R D D L+N L C +G + A + L + G +TYN L
Sbjct: 265 KLYEEMTRRCVDPDVFTYNSLINGL----CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 320
Query: 240 VIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPD 299
+ F +++++D + REM+ G D+ T +AG+ A + + + P+
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPN 380
Query: 300 TILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILS 359
Y+ ++ GLC E+A+ M+ + ++ TY I++ G + + +
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 440
Query: 360 LMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
+ +G P + +++ +CR R + + L +KM + G P
Sbjct: 441 SLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 92/196 (46%), Gaps = 20/196 (10%)
Query: 297 VPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILL-CGCLRKKQLGRCK 355
+P + ++K++S + ++ ++ + + M ++ +Y I++ C C RC
Sbjct: 66 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC-------RCS 118
Query: 356 R------ILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYN 409
R ++ M+ G P +SL++ +C+ A L+ KM + G +P V+YN
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 410 ILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVI 469
+I G C + ++ A + M GV + V ++ LC G++ A ++
Sbjct: 179 TIIDGSC------KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232
Query: 470 REMMSKGFIPDIGTYS 485
R+M+ + +P++ T++
Sbjct: 233 RDMVMRDIVPNVITFT 248
>AT1G20300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7029701-7031314 FORWARD
Length = 537
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 167/421 (39%), Gaps = 72/421 (17%)
Query: 100 SNAILNNDDGFGSKTQKFLRQFREKLSESLVAEVLNLVKNPELGIK------FFIWAGRQ 153
++AILN + + F + ++S S+V V+ + GI FF WA +
Sbjct: 84 NDAILNPSLTLHALSLDFSQIETSQVSPSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSR 143
Query: 154 IGYSH-TQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNG 212
Y H + YN EMI+ + + + +K + E+ + +LIR+Y + G
Sbjct: 144 DDYDHKSPHPYN---EMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAG 200
Query: 213 LWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLG 272
L + A+ R++D+G ++ ++ ++ SNL +
Sbjct: 201 LASEAVHCFNRMEDYGCVPDKIAFSIVI-------------------SNLSRKRRASEAQ 241
Query: 273 CFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCI 332
F SL K+ F PD I+YT ++ G C A EA M+
Sbjct: 242 SFFDSL--------------KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIE 287
Query: 333 PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKL 392
PNV TY I++ R Q+ R + + M+ GC P+ FN+L+ + ++ ++
Sbjct: 288 PNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQV 347
Query: 393 LKKMVKCGCQPGYVVYNILIGGICGNEDLP-SMDVLEL---------------------- 429
+M K GC+P + YN LI C +E+L ++ VL
Sbjct: 348 YNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEK 407
Query: 430 ------AETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGT 483
A YS+M+E N V + R G + + +EM K P++ T
Sbjct: 408 KRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNT 467
Query: 484 Y 484
Y
Sbjct: 468 Y 468
>AT2G17140.1 | Symbols: | EXPRESSED IN: 7 plant structures;
EXPRESSED DURING: F mature embryo stage, C globular
stage, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 25910 Blast hits to 6027
proteins in 187 species: Archae - 6; Bacteria - 20;
Metazoa - 625; Fungi - 635; Plants - 23410; Viruses - 0;
Other Eukaryotes - 1214 (source: NCBI BLink). |
chr2:7462820-7465740 FORWARD
Length = 874
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 132/316 (41%), Gaps = 48/316 (15%)
Query: 203 VLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNL 262
+L+R YC+ GL + LE L ++ FG +++ YN +V F R + D + + +M
Sbjct: 187 ILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREE 246
Query: 263 GYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFV----PDTILYTKMISGLCEASL 315
G D T +LCK GK DA + +E +E++ P++I Y M+ G C+ L
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGL 306
Query: 316 FEEAMDFLNRMRANSCI-----------------------------------PNVVTYRI 340
E+A +R N + P++ +Y I
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366
Query: 341 LLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCG 400
L+ G + L K I+ LM G P + L+H YC A LL++M++
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 401 CQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVG 460
C P NIL+ L M + AE +M E G L+ V + LCG G
Sbjct: 427 CLPNAYTCNILL------HSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSG 480
Query: 461 KFEKAFNVIREMMSKG 476
+ +KA +++ M G
Sbjct: 481 ELDKAIEIVKGMRVHG 496
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 137/309 (44%), Gaps = 32/309 (10%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N+L+ C+ G+ + A +G +K G +TY L+ + K+D A + +EM
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR 424
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
+++T HSL K G+ +A L+ K + + DT+ ++ GLC + ++
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDK 484
Query: 319 AMDFLNRMRA-----------------------NSCIPNVVTYRILLCGCLRKKQLGRCK 355
A++ + MR N+C+P+++TY LL G + + K
Sbjct: 485 AIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAK 544
Query: 356 RILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
+ + M+ E P +N +H +C+ S A+++LK M K GC YN LI G+
Sbjct: 545 NLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGL 604
Query: 416 CGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSK 475
+ + L EM E G+ N + + LC K E A N++ EMM K
Sbjct: 605 GIKNQIFEIHGL------MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658
Query: 476 GFIPDIGTY 484
P++ ++
Sbjct: 659 NIAPNVFSF 667
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 127/310 (40%), Gaps = 32/310 (10%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N++++ +C+ GL A +++ AS +YN + +R K A V ++M++
Sbjct: 295 NLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALT---LIEKEEFVPDTILYTKMISGLCEASLFEE 318
G ++ LCK G DA T L+++ PD + Y ++ G C +
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDA 414
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A L M N+C+PN T ILL + ++ + +L M +G N +V
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474
Query: 379 AYCRSRDYSYAYKLLKKM-----------------------VKCGCQPGYVVYNILIGGI 415
C S + A +++K M ++ C P + Y+ L+ G+
Sbjct: 475 GLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGL 534
Query: 416 CGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSK 475
C A+ ++EM+ + + V + F C GK AF V+++M K
Sbjct: 535 CKAGRFAE------AKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588
Query: 476 GFIPDIGTYS 485
G + TY+
Sbjct: 589 GCHKSLETYN 598
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 18/196 (9%)
Query: 300 TILYTKMISGLCEASLFEEAMDF--------LNRMRANSCIPNVVTYRILLCGCLRKKQL 351
+I TK+ S L S+F ++ L R R P+V Y +LL C++++++
Sbjct: 69 SIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRV 128
Query: 352 GRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
+ M++ G P FN L+ A C S A +L +M + GC+P + IL
Sbjct: 129 EFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGIL 188
Query: 412 IGGIC--GNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVI 469
+ G C G D +++L E+ GV+ NKV + C G+ + + ++
Sbjct: 189 VRGYCKAGLTD-KGLELLNAMES-------FGVLPNKVIYNTIVSSFCREGRNDDSEKMV 240
Query: 470 REMMSKGFIPDIGTYS 485
+M +G +PDI T++
Sbjct: 241 EKMREEGLVPDIVTFN 256
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 33/223 (14%)
Query: 296 FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCK 355
P T + +I LC++S + A + + M C PN T+ IL+ G + +
Sbjct: 143 IAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL 202
Query: 356 RILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
+L+ M G P+ I+N++V ++CR + K+++KM + G P V +N I +
Sbjct: 203 ELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISAL 262
Query: 416 CGNED------------------LP---------------SMDVLELAETAYSEMLEVGV 442
C LP + +LE A+T + + E
Sbjct: 263 CKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322
Query: 443 VLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ + + + + + L GKF +A V+++M KG P I +Y+
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYN 365
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 127/322 (39%), Gaps = 35/322 (10%)
Query: 183 EQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKA----------- 231
E+ LR++ ++ + N+++ C +G + A+E + ++ G A
Sbjct: 451 EELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGL 510
Query: 232 ------------SRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLC 279
+TY+ L+ +A + A + EM DS F H C
Sbjct: 511 VDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFC 570
Query: 280 KAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVV 336
K GK A ++ EK+ Y +I GL + E ++ M+ PN+
Sbjct: 571 KQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNIC 630
Query: 337 TYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKM 396
TY + +++ +L M+ + P+ F L+ A+C+ D+ A ++ +
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETA 690
Query: 397 VK-CGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARC 455
V CG + G +Y+++ + L + EL E E+G L K +
Sbjct: 691 VSICGQKEG--LYSLMFNELLAAGQL--LKATELLEAVLDRGFELGTFLYK----DLVES 742
Query: 456 LCGVGKFEKAFNVIREMMSKGF 477
LC + E A ++ +M+ +G+
Sbjct: 743 LCKKDELEVASGILHKMIDRGY 764
>AT4G26680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13454853-13456418 FORWARD
Length = 521
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 128/283 (45%), Gaps = 9/283 (3%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
LN+++ YC++G + +E L ++ G++A+ ++YN L+ L +A + M
Sbjct: 241 LNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMG 300
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV---PDTILYTKMISGLCEASLFE 317
G + T H C+A K ++A + + + V P+T+ Y +I+G + E
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
A F M N +++TY L+ G ++ + + + + + E P+ F++L+
Sbjct: 361 MAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
C ++ ++L K M++ GC P +N+L+ C NED A EM
Sbjct: 421 MGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG------ASQVLREM 474
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
+ + L+ V L GK + +++EM K F+ +
Sbjct: 475 VRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQE 517
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 155/374 (41%), Gaps = 30/374 (8%)
Query: 133 VLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREI--- 189
+L + K+ L ++FF WA + SH+ + +L + N + E LR++
Sbjct: 88 LLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTL---TKNRKFKSAESILRDVLVN 144
Query: 190 --KDEDKEVLGKLL-------------NVLIRKYCQNGLWNAALEELGRLKDFGYKASRL 234
D +V LL + L + + + A + ++KD+G+ +
Sbjct: 145 GGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVE 204
Query: 235 TYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE 294
+ NA + L ++D A +REM S + +TL C++GK + L++
Sbjct: 205 SCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDM 264
Query: 295 E---FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQL 351
E F + Y +I+G CE L A+ N M + PNVVT+ L+ G R +L
Sbjct: 265 ERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKL 324
Query: 352 GRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
++ M P+ +N+L++ Y + D+ A++ + MV G Q + YN L
Sbjct: 325 QEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNAL 384
Query: 412 IGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIRE 471
I G+C A E+ + +V N S C ++ F + +
Sbjct: 385 IFGLCKQAKTRK------AAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKS 438
Query: 472 MMSKGFIPDIGTYS 485
M+ G P+ T++
Sbjct: 439 MIRSGCHPNEQTFN 452
>AT1G30290.1 | Symbols: | unknown protein | chr1:10670320-10672740
REVERSE
Length = 806
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 172/411 (41%), Gaps = 51/411 (12%)
Query: 110 FGSKTQKFLRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEM 169
+ K + +R L S V VL + + +KFF WA RQ Y H VY ++LE+
Sbjct: 157 WNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEV 216
Query: 170 IESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGY 229
+ T R + L +K + + ++ Y + G AL+ L ++ G
Sbjct: 217 LSKTKLCQGSR---RVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGV 273
Query: 230 KASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALT 289
+ + L N + VF+RA +L+ A M +G + T C C + +A+
Sbjct: 274 EPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIE 333
Query: 290 LIE---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRM-RANSCIPNVVTYRILL--- 342
L+E + +PD + Y ++ LC+ E D + +M + + +P+ VTY L+
Sbjct: 334 LLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHML 393
Query: 343 --------------------------------CGCLRKKQLGRCKRILSLMIMEG-CFPS 369
++ ++ K +++ M+ +G C P
Sbjct: 394 TKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPD 453
Query: 370 PGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC-GNEDLPSMDVLE 428
+ ++V+ +CR + A KLL+ M G +P V Y L+ G+C + L + +++
Sbjct: 454 VVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMN 513
Query: 429 LAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIP 479
++E + N + S L GK +A +V+REM+ KGF P
Sbjct: 514 MSEEHWWSP-------NSITYSVIMHGLRREGKLSEACDVVREMVLKGFFP 557
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 130/287 (45%), Gaps = 10/287 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI ++ + AL L ++ G++ +L Y+A+V + ++ A + EM +
Sbjct: 387 NTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLS 446
Query: 262 LGY-SMDSFTLGCFAHSLCKAG---KWRDALTLIEKEEFVPDTILYTKMISGLCEASLFE 317
G+ D T + C+ G K + L ++ P+T+ YT +++G+C
Sbjct: 447 KGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSL 506
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
EA + +N + PN +TY +++ G R+ +L ++ M+++G FP P N L+
Sbjct: 507 EAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLL 566
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
+ CR A K +++ + GC V + +I G C N D L+ A + +M
Sbjct: 567 QSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQN------DELDAALSVLDDM 620
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+ + + L G+ +A ++++M+ KG P TY
Sbjct: 621 YLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTY 667
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 11/214 (5%)
Query: 277 SLCKAGKWRDAL---TLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIP 333
S +AG+ RDAL TL+++ P+ ++ I A+ E+A+ FL RM+ +P
Sbjct: 251 SYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVP 310
Query: 334 NVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLL 393
NVVTY ++ G ++ +L M +GC P + +++ C+ + L+
Sbjct: 311 NVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLM 370
Query: 394 KKMVK-CGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNF 452
KKM K G P V YN LI L D + A + E G ++K+ S
Sbjct: 371 KKMAKEHGLVPDQVTYNTLI------HMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAI 424
Query: 453 ARCLCGVGKFEKAFNVIREMMSKGFI-PDIGTYS 485
LC G+ +A ++I EM+SKG PD+ TY+
Sbjct: 425 VHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYT 458
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 122/289 (42%), Gaps = 23/289 (7%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
L+ C+ G A E + ++ + + +TY+ ++ R KL A V REM
Sbjct: 493 TALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVL 552
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
G+ + SLC+ G+ +A +E+ + + + +T +I G C+ +
Sbjct: 553 KGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDA 612
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ L+ M + +V TY L+ +K ++ ++ M+ +G P+P + +++H
Sbjct: 613 ALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIH 672
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
YC+ +L+KM+ Q +YN +I +C L D L
Sbjct: 673 RYCQMGKVDDLVAILEKMI--SRQKCRTIYNQVIEKLCVLGKLEEADTL----------- 719
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEK------AFNVIREMMSKGFIPDI 481
+G VL + S+ C + + K A+ V M ++ IPD+
Sbjct: 720 -LGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDV 767
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 17/193 (8%)
Query: 299 DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRIL 358
D ++Y M+ L + L + + L M+ + ++ R QL ++L
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 359 SLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
+LM G P+ I N+ + + R+ A + L++M G P V YN +I G C
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC-- 323
Query: 419 EDLPSM-DVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSK-- 475
DL + + +EL E +S+ G + +KV+ LC EK +R++M K
Sbjct: 324 -DLHRVEEAIELLEDMHSK----GCLPDKVSYYTIMGYLCK----EKRIVEVRDLMKKMA 374
Query: 476 ---GFIPDIGTYS 485
G +PD TY+
Sbjct: 375 KEHGLVPDQVTYN 387
>AT2G18940.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8203873-8206341 REVERSE
Length = 822
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 151/340 (44%), Gaps = 17/340 (5%)
Query: 152 RQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQN 211
+++G S T YN +L++ + + L E++ + + + ++ +
Sbjct: 237 KEMGPSPTLVTYNVILDVFGKMGRSWRKIL--GVLDEMRSKGLKFDEFTCSTVLSACARE 294
Query: 212 GLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTL 271
GL A E LK GY+ +TYNAL+ VF +A A V +EM DS T
Sbjct: 295 GLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTY 354
Query: 272 GCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRA 328
+ +AG ++A +IE K+ +P+ I YT +I +A +EA+ M+
Sbjct: 355 NELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKE 414
Query: 329 NSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYS- 387
C+PN TY +L +K + ++L M GC P+ +N+++ A C ++
Sbjct: 415 AGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDK 473
Query: 388 YAYKLLKKMVKCGCQPGYVVYNILIG--GICGNEDLPSMDVLELAETAYSEMLEVGVVLN 445
+ ++ ++M CG +P +N LI G CG+E +D A Y EM G
Sbjct: 474 FVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE----VD----ASKMYGEMTRAGFNAC 525
Query: 446 KVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ L G + NVI +M SKGF P +YS
Sbjct: 526 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYS 565
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 22/313 (7%)
Query: 179 DRIP-EQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYN 237
D+IP +++L +++ ++ Y + G + A++ R+K+ G + +TYN
Sbjct: 199 DKIPLQEYLLDVR---------AYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYN 249
Query: 238 ALVIVFLRAEKLDTAYL-VHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE- 295
++ VF + + L V EM + G D FT + + G R+A + +
Sbjct: 250 VILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKS 309
Query: 296 --FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGR 353
+ P T+ Y ++ +A ++ EA+ L M NSC + VTY L+ +R
Sbjct: 310 CGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKE 369
Query: 354 CKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIG 413
++ +M +G P+ + +++ AY ++ A KL M + GC P YN ++
Sbjct: 370 AAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVL- 428
Query: 414 GICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFN-VIREM 472
+ G + + + L +M G N+ N LCG +K N V REM
Sbjct: 429 SLLGKKSRSNEMIKMLC-----DMKSNGCSPNRATW-NTMLALCGNKGMDKFVNRVFREM 482
Query: 473 MSKGFIPDIGTYS 485
S GF PD T++
Sbjct: 483 KSCGFEPDRDTFN 495
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 126/298 (42%), Gaps = 12/298 (4%)
Query: 180 RIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNAL 239
R ++F E+K E N L++ + + G++ AL L +++ A +TYN L
Sbjct: 298 REAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNEL 357
Query: 240 VIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEF 296
V ++RA A V M+ G ++ T + KAGK +AL L +++
Sbjct: 358 VAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 417
Query: 297 VPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKR 356
VP+T Y ++S L + S E + L M++N C PN T+ +L C K R
Sbjct: 418 VPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNR 477
Query: 357 ILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC 416
+ M G P FN+L+ AY R A K+ +M + G YN L+ +
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALA 537
Query: 417 GNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKF---EKAFNVIRE 471
D S E S+M G + + S +C G + E+ N I+E
Sbjct: 538 RKGDWRS------GENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKE 589
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 141/364 (38%), Gaps = 51/364 (14%)
Query: 155 GYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLW 214
G S +A +N +L + N D+ + RE+K E N LI Y + G
Sbjct: 451 GCSPNRATWNTMLALC---GNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 507
Query: 215 NAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMD----SFT 270
A + G + G+ A TYNAL+ R + V +M + G+ S
Sbjct: 508 VDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLM 567
Query: 271 LGCFAHS---------------------------------LCKA--GKWRDALTLIEKEE 295
L C+A C+A G R A TL +K
Sbjct: 568 LQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSER-AFTLFKKHG 626
Query: 296 FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCK 355
+ PD +++ M+S +++++A L +R + P++VTY L+ +R+ + + +
Sbjct: 627 YKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAE 686
Query: 356 RILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
IL + P +N+++ +CR A ++L +M + G +P YN + G
Sbjct: 687 EILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGY 746
Query: 416 CGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSK 475
+M + E M + N++ C GK+ +A + + ++ K
Sbjct: 747 T------AMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI--K 798
Query: 476 GFIP 479
F P
Sbjct: 799 TFDP 802
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 7/195 (3%)
Query: 152 RQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQN 211
++ GY ++N++L + T NN D+ E L I+++ N L+ Y +
Sbjct: 623 KKHGYKPDMVIFNSMLSIF--TRNNMYDQ-AEGILESIREDGLSPDLVTYNSLMDMYVRR 679
Query: 212 GLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTL 271
G A E L L+ K ++YN ++ F R + A + EM+ G FT
Sbjct: 680 GECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTY 739
Query: 272 GCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRA 328
F G + + +IE K + P+ + + ++ G C A + EAMDF+++++
Sbjct: 740 NTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT 799
Query: 329 -NSCIPNVVTYRILL 342
+ C + R+ L
Sbjct: 800 FDPCFDDQSIQRLAL 814
>AT1G62670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23204773-23206665 REVERSE
Length = 630
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 121/257 (47%), Gaps = 9/257 (3%)
Query: 232 SRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLI 291
S + ++ L+ + K D + +M NLG + +T + C+ + AL ++
Sbjct: 80 SIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVL 139
Query: 292 EKE---EFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRK 348
K + P+ + + +++G C + EA+ +++M PN VT+ L+ G
Sbjct: 140 GKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH 199
Query: 349 KQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVY 408
+ ++ M+ +GC P + +V+ C+ D A+ LL KM + +PG ++Y
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIY 259
Query: 409 NILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNV 468
N +I G+C + + D L L + EM G+ N V S+ CLC G++ A +
Sbjct: 260 NTIIDGLCKYKHMD--DALNL----FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 469 IREMMSKGFIPDIGTYS 485
+ +M+ + PD+ T+S
Sbjct: 314 LSDMIERKINPDVFTFS 330
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 129/289 (44%), Gaps = 11/289 (3%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVI-VFLRAEKLDTAYLVHREM 259
L+ L+ YC + + A+ + ++ GY+ + +T+N L+ +FL + + L+ R M
Sbjct: 154 LSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR-M 212
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLCEASLF 316
G D T G + LCK G A L+ K E P ++Y +I GLC+
Sbjct: 213 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 272
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
++A++ M PNVVTY L+ + R+LS MI P F++L
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
+ A+ + A KL +MVK P V Y+ LI G C + D L+ A+ +
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH------DRLDEAKQMFEF 386
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
M+ + V + + C + E+ V REM +G + + TY+
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 124/290 (42%), Gaps = 11/290 (3%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ N +I C+ + AL ++ G + + +TY++L+ + A + +M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLF 316
+ D FT + K GK +A L + K P + Y+ +I+G C
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
+EA M + C P+VVTY L+ G + K++ + M G + +N L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDL-PSMDVLELAETAYS 435
+ ++ D A ++ K+MV G P + YN L+ G+C N L +M V E + +
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-- 495
Query: 436 EMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+E + + + +C GK E +++ + KG PD+ Y+
Sbjct: 496 -KMEPTIYTYNIMIEG----MCKAGKVEDGWDLFCNLSLKGVKPDVVAYN 540
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 3/202 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI+ +C+ +E + G + +TYN L+ +A D A + +EM +
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
G + T LCK GK A+ + E + + P Y MI G+C+A E+
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
D + P+VV Y ++ G RK + M +G P+ G +N+L+
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Query: 379 AYCRSRDYSYAYKLLKKMVKCG 400
A R D + +L+K+M CG
Sbjct: 580 ARLRDGDREASAELIKEMRSCG 601
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 134/350 (38%), Gaps = 67/350 (19%)
Query: 203 VLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNL 262
V++ C+ G + A L +++ + L YN ++ + + +D A + +EM
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 263 GYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEA 319
G + T LC G+W DA L+ + + PD ++ +I + EA
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 320 MDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHA 379
+ M S P++VTY L+ G +L K++ M+ + CFP +N+L+
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 380 YCRSR-----------------------------------DYSYAYKLLKKMVKCGCQPG 404
+C+ + D A ++ K+MV G P
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 405 YVVYNILIGGICGNEDL-PSMDVLELAETA--------YSEMLE---------------- 439
+ YN L+ G+C N L +M V E + + Y+ M+E
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 440 ----VGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
GV + V + C G E+A + +EM G +P+ G Y+
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYN 575
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 116/318 (36%), Gaps = 44/318 (13%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
LI C G W+ A L + + T++AL+ F++ KL A ++ EM
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAM 320
T + C + +A + E + PD + Y +I G C+ EE M
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
+ M + N VTY IL+ G + + I M+ +G P+ +N+L+
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 381 CRSRDYS------------------YAYKLL-KKMVKCG----------------CQPGY 405
C++ Y Y ++ + M K G +P
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Query: 406 VVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKA 465
V YN +I G C D L + EM E G + N + R G E +
Sbjct: 537 VAYNTMISGFCRKGSKEEADAL------FKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 466 FNVIREMMSKGFIPDIGT 483
+I+EM S GF D T
Sbjct: 591 AELIKEMRSCGFAGDAST 608
>AT1G09680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3134107-3135930 REVERSE
Length = 607
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 134/304 (44%), Gaps = 9/304 (2%)
Query: 185 FLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFL 244
F EI D + + N+L+ K+C+ G + A + + + + +++N L+ +
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 245 RAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTI 301
+ LD + + +M D FT ++LCK K A L + K +P+ +
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 302 LYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLM 361
++T +I G + + +M + P++V Y L+ G + L + I+ M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 362 IMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDL 421
I G P + +L+ +CR D A ++ K+M + G + V ++ L+ G+C +
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 422 PSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDI 481
AE A EML G+ + V + C G + F +++EM S G +P +
Sbjct: 467 ID------AERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSV 520
Query: 482 GTYS 485
TY+
Sbjct: 521 VTYN 524
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 163/420 (38%), Gaps = 60/420 (14%)
Query: 122 REKLSESLVAEVLNLVKNPELGIK------FFIWAGRQIGYSHTQAVY------------ 163
R+ L V V++L+ + L + FF + Q G+ T Y
Sbjct: 74 RKVLPSLSVHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLAVHEM 133
Query: 164 ----NALLEMIES-TNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAAL 218
+L+E++ S NS + F+ ++ + G L++ L+ Y G A+
Sbjct: 134 FTEAQSLIELVVSRKGKNSASSV---FISLVEMRVTPMCGFLVDALMITYTDLGFIPDAI 190
Query: 219 EELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSL 278
+ + + L+ ++ T + + E+ + G+ ++ + +
Sbjct: 191 QCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKF 250
Query: 279 CKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNV 335
CK G DA + I K P + + +I+G C+ +E ++M + P+V
Sbjct: 251 CKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDV 310
Query: 336 VTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKK 395
TY L+ ++ ++ + M G P+ IF +L+H + R+ + + +K
Sbjct: 311 FTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQK 370
Query: 396 MVKCGCQPGYVVYNILIGGICGNEDLPSM------------------------------D 425
M+ G QP V+YN L+ G C N DL + D
Sbjct: 371 MLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGD 430
Query: 426 VLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
V E A EM + G+ L++V S +C G+ A +REM+ G PD TY+
Sbjct: 431 V-ETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYT 489
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 3/194 (1%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
L N L+ +C+NG AA + + G + ++TY L+ F R ++TA + +EM
Sbjct: 382 LYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEM 441
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLF 316
G +D +CK G+ DA L + + PD + YT M+ C+
Sbjct: 442 DQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDA 501
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
+ L M+++ +P+VVTY +LL G + Q+ +L M+ G P +N+L
Sbjct: 502 QTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTL 561
Query: 377 VHAYCRSRDYSYAY 390
+ + R + S Y
Sbjct: 562 LEGHHRHANSSKRY 575
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 133/348 (38%), Gaps = 47/348 (13%)
Query: 139 NPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLG 198
NP I F G+ V+N L+ N S+ ++ EI +
Sbjct: 219 NPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISD---AQKVFDEITKRSLQPTV 275
Query: 199 KLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAY----- 253
N LI YC+ G + +++ + TY+AL+ + K+D A+
Sbjct: 276 VSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDE 335
Query: 254 ---------------LVH---------------REMSNLGYSMDSFTLGCFAHSLCKAGK 283
L+H ++M + G D + CK G
Sbjct: 336 MCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGD 395
Query: 284 WRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRI 340
A +++ + PD I YT +I G C E A++ M N + V +
Sbjct: 396 LVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSA 455
Query: 341 LLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCG 400
L+CG ++ ++ +R L M+ G P + ++ A+C+ D +KLLK+M G
Sbjct: 456 LVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDG 515
Query: 401 CQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVN 448
P V YN+L+ G+C + + D+L ML +GVV + +
Sbjct: 516 HVPSVVTYNVLLNGLCKLGQMKNADML------LDAMLNIGVVPDDIT 557
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 3/218 (1%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ LI + +NG + E ++ G + + YN LV F + L A + M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLF 316
G D T C+ G AL + +++ D + ++ ++ G+C+
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
+A L M P+ VTY +++ +K ++L M +G PS +N L
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVL 526
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG 414
++ C+ A LL M+ G P + YN L+ G
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
>AT3G09060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2766367-2768430 REVERSE
Length = 687
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 137/307 (44%), Gaps = 10/307 (3%)
Query: 182 PEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVI 241
E E+ + + N ++ +C+ G +LE L R+ + + ++YN L+
Sbjct: 309 AESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLE-LWRIMEHKNSVNIVSYNILIK 367
Query: 242 VFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVP--- 298
L K+D A ++ R M GY+ D T G F H LC G AL ++++ E
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427
Query: 299 DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRIL 358
D Y +I LC+ EEA + + M + N L+ G +R +LG L
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 359 SLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
M GC P+ +N L+ C++ + A +K+M++ G +P Y+IL+ G+C +
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 419 EDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFI 478
+ LEL LE V+++ + + LC VGK + A V+ M +
Sbjct: 548 RKIDL--ALELWHQFLQSGLETDVMMHNILIHG----LCSVGKLDDAMTVMANMEHRNCT 601
Query: 479 PDIGTYS 485
++ TY+
Sbjct: 602 ANLVTYN 608
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 172/398 (43%), Gaps = 38/398 (9%)
Query: 121 FREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNN-NSND 179
F + LS V ++L KNP F A R GY+H+ VY+ +L + T N
Sbjct: 4 FPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVS 63
Query: 180 RIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKD-FGYKASRLTYNA 238
RI E + D++V L+V I+ Y +N + + AL+ R+++ FG + + +YN
Sbjct: 64 RIVELIRSQECKCDEDVA---LSV-IKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNT 119
Query: 239 LVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEE 295
L+ F+ A++ + G + + T CK ++ A L + KE
Sbjct: 120 LLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEG 179
Query: 296 FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCK 355
F PD Y+ +I+ L +A ++A++ + M P+V Y IL+ G L++K
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAM 239
Query: 356 RILSLMIME-GCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG 414
+ ++ + +P+ N ++ + K+ ++M + + Y+ LI G
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299
Query: 415 IC--GNEDLPSMDVLELAETAYS--------------------EMLEVGVVL---NKVNV 449
+C GN D EL E S E LE+ ++ N VN+
Sbjct: 300 LCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNI 359
Query: 450 SNFARCLCGV---GKFEKAFNVIREMMSKGFIPDIGTY 484
++ + G+ GK ++A + R M +KG+ D TY
Sbjct: 360 VSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTY 397
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 105/262 (40%), Gaps = 42/262 (16%)
Query: 193 DKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTA 252
DK G + I C NG N AL + ++ G Y +++ + ++L+ A
Sbjct: 393 DKTTYG----IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEA 448
Query: 253 YLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISG 309
+ +EMS G ++S L + + +A L + K P + Y +I G
Sbjct: 449 SNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICG 508
Query: 310 LCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQL------------------ 351
LC+A F EA F+ M N P++ TY ILLCG R +++
Sbjct: 509 LCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETD 568
Query: 352 ---------GRCK--------RILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLK 394
G C +++ M C + +N+L+ + + D + A +
Sbjct: 569 VMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWG 628
Query: 395 KMVKCGCQPGYVVYNILIGGIC 416
M K G QP + YN ++ G+C
Sbjct: 629 YMYKMGLQPDIISYNTIMKGLC 650
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 96/237 (40%), Gaps = 9/237 (3%)
Query: 185 FLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAA---LEELGRLKDFGYKASRLTYNALVI 241
++E+ E+ + N LI ++ A L E+G+ G + + ++YN L+
Sbjct: 451 LVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK---NGCRPTVVSYNILIC 507
Query: 242 VFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVP 298
+A K A +EM G+ D T LC+ K AL L +
Sbjct: 508 GLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLET 567
Query: 299 DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRIL 358
D +++ +I GLC ++AM + M +C N+VTY L+ G + R I
Sbjct: 568 DVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIW 627
Query: 359 SLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
M G P +N+++ C R SYA + G P +NIL+ +
Sbjct: 628 GYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
>AT1G62910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23299060-23303162 FORWARD
Length = 1133
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 157/401 (39%), Gaps = 72/401 (17%)
Query: 153 QIGYSHTQAVYNALLEMIESTNNNSND-RIPEQFLREIKDEDKEVLGKLLNVLIRKYCQN 211
++GY + L+ + N S + +Q ++ D G ++N L C+
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL----CKR 236
Query: 212 GLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTL 271
G + AL L +++ +A + YN ++ + + +D A + EM N G D FT
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 272 GCFAHSLCKAGKWRDALTLIE--------------------------------------K 293
LC G+W DA L+ K
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 294 EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGR 353
PD Y+ +I+G C +EA M + C PNVVTY L+ G + K++
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 354 CKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIG 413
+ M G + + +L+H + ++RD A + K+MV G P + YNIL+
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 414 GICGNEDLP-SMDVLELAETA--------YSEMLE--------------------VGVVL 444
G+C N L +M V E + + Y+ M+E GV
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP 536
Query: 445 NKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
N + + C G E+A +++++M G +P+ GTY+
Sbjct: 537 NVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYN 577
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 125/288 (43%), Gaps = 9/288 (3%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
L+ L+ YC + + A+ + ++ + GYK T+ L+ K A + +M
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFE 317
G D T G + LCK G AL+L+ EK + D ++Y +I GLC+ +
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMD 275
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
+A++ M P+V TY L+ + R+LS MI P+ F++L+
Sbjct: 276 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 335
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
A+ + A KL +M+K P Y+ LI G C + D L+ A+ + M
Sbjct: 336 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH------DRLDEAKHMFELM 389
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ N V S + C + E+ + REM +G + + TY+
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYT 437
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 9/285 (3%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
++ C+ G + AL L +++ +A+ + Y+ ++ + D A + EM N G
Sbjct: 829 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 888
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAM 320
+ T LC G+W DA L+ + + P+ + ++ +I + +A
Sbjct: 889 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 948
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
M S PN+ TY L+ G +LG K++L LMI + C P+ +N+L++ +
Sbjct: 949 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 1008
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEV 440
C+++ +L ++M + G V Y LI G D + A+ + +M+ V
Sbjct: 1009 CKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN------AQMVFKQMVSV 1062
Query: 441 GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
GV N + + LC GK KA V + PDI TY+
Sbjct: 1063 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 1107
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 127/289 (43%), Gaps = 11/289 (3%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVI-VFLRAEKLDTAYLVHREM 259
LN L+ +C + A+ + ++ + GYK +T+ L+ +FL + + L+ R M
Sbjct: 756 LNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDR-M 814
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV---PDTILYTKMISGLCEASLF 316
G D T G + LCK G AL L+ K E + ++Y+ +I LC+
Sbjct: 815 VQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 874
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
++A++ M PNV+TY L+ + R+LS MI P+ F++L
Sbjct: 875 DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSAL 934
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
+ A+ + A KL ++M+K P Y+ LI G C +D L A+
Sbjct: 935 IDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC------MLDRLGEAKQMLEL 988
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
M+ + N V + C + +K + REM +G + + TY+
Sbjct: 989 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYT 1037
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 119/257 (46%), Gaps = 9/257 (3%)
Query: 232 SRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLI 291
S + +N L+ + K + + +M LG S D +T F + C+ + AL ++
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 292 EKE---EFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRK 348
K + PD + + +++G C + +A+ +++M P+ T+ L+ G
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 349 KQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVY 408
+ ++ M+ GC P + ++V+ C+ D A LLKKM K + V+Y
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 409 NILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNV 468
N +I G+C + + D L L ++EM G+ + S+ CLC G++ A +
Sbjct: 262 NTIIDGLCKYKHMD--DALNL----FTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 469 IREMMSKGFIPDIGTYS 485
+ +M+ + P++ T+S
Sbjct: 316 LSDMIERKINPNVVTFS 332
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 136/302 (45%), Gaps = 14/302 (4%)
Query: 192 EDKEVLG-----KLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRA 246
E E+LG N+LI +C+ + AL LG++ GY+ +T N+L+ F
Sbjct: 707 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 766
Query: 247 EKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILY 303
++ A + +M +GY D+ T H L K +A+ LI++ PD + Y
Sbjct: 767 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 826
Query: 304 TKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIM 363
+++GLC+ + A++ LN+M A NVV Y ++ + + + + M
Sbjct: 827 GAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 886
Query: 364 EGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPS 423
+G P+ ++SL+ C +S A +LL M++ P V ++ LI L
Sbjct: 887 KGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVK 946
Query: 424 MDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGT 483
AE Y EM++ + N S+ C + + +A ++ M+ K +P++ T
Sbjct: 947 ------AEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT 1000
Query: 484 YS 485
Y+
Sbjct: 1001 YN 1002
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 3/202 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
+ LI+ +C+ +E + G + +TY L+ F +A D A +V ++M +
Sbjct: 402 STLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
+G + T LCK GK A+ + E + PD Y MI G+C+A E+
Sbjct: 462 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVED 521
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
+ + PNV+ Y ++ G RK +L M +G P+ G +N+L+
Sbjct: 522 GWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR 581
Query: 379 AYCRSRDYSYAYKLLKKMVKCG 400
A R D + +L+K+M CG
Sbjct: 582 ARLRDGDREASAELIKEMRSCG 603
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 100/216 (46%), Gaps = 3/216 (1%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
LI C G W+ A L + + + +T++AL+ F++ KL A ++ EM
Sbjct: 899 LISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 958
Query: 264 YSMDSFTLGCFAHSLC---KAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAM 320
+ FT + C + G+ + L L+ +++ +P+ + Y +I+G C+A ++ M
Sbjct: 959 IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM 1018
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
+ M + N VTY L+ G + + + + M+ G P+ +N L+
Sbjct: 1019 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 1078
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC 416
C++ + A + + + + +P YNI+I G+C
Sbjct: 1079 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 1114
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 129/291 (44%), Gaps = 21/291 (7%)
Query: 206 RKYCQNGLWNAALEELGRLKDFGYKA------SRLTYNALVIVFLRAEKLDTAYLVHREM 259
R+ + GL + L++ L FG A S + ++ L+ + K D +M
Sbjct: 652 REVLRTGLSDIELDDAIGL--FGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKM 709
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLF 316
LG S + +T + C+ + AL L + K + PD + +++G C +
Sbjct: 710 EILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRI 769
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
+A+ +++M P+ VT+ L+ G + ++ M+ GC P + ++
Sbjct: 770 SDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAV 829
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICG--NEDLPSMDVLELAETAY 434
V+ C+ D A LL KM + V+Y+ +I +C +ED D L L +
Sbjct: 830 VNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHED----DALNL----F 881
Query: 435 SEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+EM GV N + S+ CLC G++ A ++ +M+ + P++ T+S
Sbjct: 882 TEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFS 932
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 144/364 (39%), Gaps = 88/364 (24%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N +I +C+ G A L ++K+ G + TYN L+ LR + + + +EM +
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Query: 262 LGYSMDSFTLG---------------------CFAHSLCKAGK----------WRDALTL 290
G++ D+ T+G F+ +C + R L+
Sbjct: 602 CGFAGDASTIGLSSKFKREIEKPNRENACKNIIFSEEICSSESCGESYDYREVLRTGLSD 661
Query: 291 IEKEEFV------------PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTY 338
IE ++ + P I ++K++S + + + F+ + F +M N+ TY
Sbjct: 662 IELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTY 721
Query: 339 RILL---CGCL----------RKKQLGRCKRILSL----------------------MIM 363
IL+ C C + +LG I++L M+
Sbjct: 722 NILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVE 781
Query: 364 EGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC--GNEDL 421
G P F +L+H S A L+ +MV+ GCQP V Y ++ G+C G+ DL
Sbjct: 782 MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL 841
Query: 422 PSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDI 481
++++L E A E N V S LC + A N+ EM +KG P++
Sbjct: 842 -ALNLLNKMEAAKIEA-------NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 893
Query: 482 GTYS 485
TYS
Sbjct: 894 ITYS 897
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI +C+ + +E + G + +TY L+ F +A D A +V ++M +
Sbjct: 1002 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 1061
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEA 313
+G + T LCK GK A+ + E + PD Y MI G+C+A
Sbjct: 1062 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKA 1116
>AT3G14580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4903012-4904229 FORWARD
Length = 405
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 150/311 (48%), Gaps = 8/311 (2%)
Query: 120 QFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSND 179
+ ++ L+ + V ++ + VK+P + + ++ Y T+++Y ++ D
Sbjct: 55 RHKDWLAPNEVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAK--MYD 112
Query: 180 RIPEQFLREIKDEDK-EVLGKLLNVLIRKYCQ-NGLWNAALEELGRLKDFGYKASRLTYN 237
I E+ +R IK E + + L+R Y G N A+E L + DFG S ++N
Sbjct: 113 EI-EEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFN 171
Query: 238 ALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KE 294
++ + + A+ D + + LG +D+ L LC++G AL L++ ++
Sbjct: 172 FILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQ 231
Query: 295 EFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRC 354
+ P+ + ++ +I G C FEEA L RM P+ +T+ IL+ G +K ++
Sbjct: 232 KSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEG 291
Query: 355 KRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG 414
+L M ++GC P+PG + +++ + A +++ +M+ G +P ++ Y ++ G
Sbjct: 292 IDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLG 351
Query: 415 ICGNEDLPSMD 425
+C + + MD
Sbjct: 352 LCETKSVVEMD 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 8/196 (4%)
Query: 292 EKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMR-ANSC-IPNVVTYRILLCGCLRKK 349
+++++ P LY MI+ +A +++E + + ++ C Y ++
Sbjct: 87 KRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAG 146
Query: 350 QLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYN 409
++ R IL M GC+PS FN +++ ++ + +K+ K G + N
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 410 ILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVI 469
ILI G+C + +L E A E + N + S R C GKFE+AF ++
Sbjct: 207 ILIKGLCESGNL------EAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 470 REMMSKGFIPDIGTYS 485
M + PD T++
Sbjct: 261 ERMEKERIEPDTITFN 276
>AT1G63130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23412854-23414746 FORWARD
Length = 630
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 123/257 (47%), Gaps = 9/257 (3%)
Query: 232 SRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLI 291
S + ++ L+ + K D + +M NLG S + +T + C+ + AL ++
Sbjct: 80 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVL 139
Query: 292 EKE---EFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRK 348
K + PD + +++G C + +A+ + +M P+ T+ L+ G R
Sbjct: 140 AKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH 199
Query: 349 KQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVY 408
+ ++ M+++GC P + +V+ C+ D A LLKKM + +PG V+Y
Sbjct: 200 NRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIY 259
Query: 409 NILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNV 468
N +I +C +++ D L L ++EM G+ N V ++ RCLC G++ A +
Sbjct: 260 NTIIDALCNYKNVN--DALNL----FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 469 IREMMSKGFIPDIGTYS 485
+ +M+ + P++ T+S
Sbjct: 314 LSDMIERKINPNVVTFS 330
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 9/288 (3%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
LN L+ +C + A+ +G++ + GY+ T+N L+ R + A + M
Sbjct: 154 LNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV 213
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLCEASLFE 317
G D T G + LCK G AL+L++K E P ++Y +I LC
Sbjct: 214 VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN 273
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
+A++ M PNVVTY L+ + R+LS MI P+ F++L+
Sbjct: 274 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
A+ + A KL +M+K P Y+ LI G C + D L+ A+ + M
Sbjct: 334 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH------DRLDEAKHMFELM 387
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ N V + + C + ++ + REM +G + + TY+
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 120/266 (45%), Gaps = 9/266 (3%)
Query: 223 RLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAG 282
++++ G + TY+ L+ F R +L A V +M LGY D TL + C
Sbjct: 106 QMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGN 165
Query: 283 KWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYR 339
+ DA++L+ + + PD+ + +I GL + EA+ ++RM C P++VTY
Sbjct: 166 RISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYG 225
Query: 340 ILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKC 399
I++ G ++ + +L M P I+N+++ A C ++ + A L +M
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 400 GCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGV 459
G +P V YN LI +C A S+M+E + N V S
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSD------ASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 460 GKFEKAFNVIREMMSKGFIPDIGTYS 485
GK +A + EM+ + PDI TYS
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYS 365
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 130/287 (45%), Gaps = 9/287 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
++LI +C+ + AL L ++ GY+ +T N+L+ F ++ A + +M
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
+GY DSFT H L + + +A+ L+++ + PD + Y +++GLC+ +
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ L +M P VV Y ++ K + + + M +G P+ +NSL+
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
C +S A +LL M++ P V ++ LI L AE Y EM+
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE------AEKLYDEMI 353
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ + + S+ C + ++A ++ M+SK P++ TY+
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 400
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 123/287 (42%), Gaps = 9/287 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LIR C G W+ A L + + + +T++AL+ F++ KL A ++ EM
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
D FT + C + +A + E ++ P+ + Y +I G C+A +E
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
M+ M + N VTY L+ G + ++ + + M+ +G P ++ L+
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
C + A + + + + +P YNI+I G+C +E + +
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMC------KAGKVEDGWDLFCSLS 528
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
GV N V + C G E+A + REM +G +PD GTY+
Sbjct: 529 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYN 575
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 3/201 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI+ +C+ + +E + G + +TY L+ F +A + D A +V ++M +
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVS 459
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
G D T LC GK AL + E + + PD Y MI G+C+A E+
Sbjct: 460 DGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVED 519
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
D + PNVVTY ++ G RK + M EG P G +N+L+
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Query: 379 AYCRSRDYSYAYKLLKKMVKC 399
A+ R D + + +L+++M C
Sbjct: 580 AHLRDGDKAASAELIREMRSC 600
>AT2G15630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6814521-6816404 FORWARD
Length = 627
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 167/392 (42%), Gaps = 29/392 (7%)
Query: 112 SKTQKFLRQFREKLSESLVAE-VLNLVKNPELGIKF----------FIWAGRQIGY---- 156
S + +KL+ SLV+ +L+LVK P L F F I
Sbjct: 56 SSQWHIVEHVADKLTPSLVSTTLLSLVKTPNLAFNFVNHIDLYRLDFQTQCLAIAVISKL 115
Query: 157 SHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNA 216
S + V L E++ S N+ + E L + E K + L ++L+R CQ + +
Sbjct: 116 SSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTI--LFDLLVRCCCQLRMVDE 173
Query: 217 ALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAH 276
A+E +K+ G+ T N ++ + R +++ A++ + +M + + +T +
Sbjct: 174 AIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMIN 233
Query: 277 SLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIP 333
LCK GK + A L ++E P + Y ++ G E A ++ M++ P
Sbjct: 234 VLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQP 293
Query: 334 NVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLL 393
++ TY +L + GR +L M G P +N L+ + D A+
Sbjct: 294 DMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYR 350
Query: 394 KKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFA 453
+MVK G P + YN LI G+ + +E AE E+ E G+VL+ V +
Sbjct: 351 DEMVKQGMVPTFYTYNTLIHGLFME------NKIEAAEILIREIREKGIVLDSVTYNILI 404
Query: 454 RCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
C G +KAF + EMM+ G P TY+
Sbjct: 405 NGYCQHGDAKKAFALHDEMMTDGIQPTQFTYT 436
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 140/319 (43%), Gaps = 41/319 (12%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N++I C+ G A LG ++ FG K + +TYN LV F +++ A L+ EM +
Sbjct: 229 NIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKS 288
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMD 321
G+ D T +C G+ + L +++ VPD++ Y +I G E A
Sbjct: 289 KGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA 348
Query: 322 FLNRMRANSCIPNVVTYRILLCGC---------------LRKK----------------- 349
+ + M +P TY L+ G +R+K
Sbjct: 349 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYC 408
Query: 350 QLGRCKRILSL---MIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYV 406
Q G K+ +L M+ +G P+ + SL++ CR A +L +K+V G +P V
Sbjct: 409 QHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLV 468
Query: 407 VYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAF 466
+ N L+ G C ++ ++ A + EM + + + V + R LCG GKFE+A
Sbjct: 469 MMNTLMDGHC------AIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522
Query: 467 NVIREMMSKGFIPDIGTYS 485
++ EM +G PD +Y+
Sbjct: 523 ELMGEMKRRGIKPDHISYN 541
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 137/345 (39%), Gaps = 15/345 (4%)
Query: 143 GIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLN 202
G + I + G+ YN +L + N+ + LRE+K+ N
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWM------CNEGRASEVLREMKEIGLVPDSVSYN 331
Query: 203 VLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNL 262
+LIR NG A + G + TYN L+ K++ A ++ RE+
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391
Query: 263 GYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEA 319
G +DS T + C+ G + A L ++ + P YT +I LC + EA
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451
Query: 320 MDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHA 379
+ ++ P++V L+ G + R +L M M P +N L+
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRG 511
Query: 380 YCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLE 439
C + A +L+ +M + G +P ++ YN LI G D A EML
Sbjct: 512 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKH------AFMVRDEMLS 565
Query: 440 VGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+G + + + L + E A ++REM S+G +P+ ++
Sbjct: 566 LGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 136/344 (39%), Gaps = 15/344 (4%)
Query: 145 KFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVL 204
K F+ G T YN L++ R+ + E+K + + + N +
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARL---IISEMKSKGFQPDMQTYNPI 301
Query: 205 IRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGY 264
+ C G + L E+ K+ G ++YN L+ L+ A+ EM G
Sbjct: 302 LSWMCNEGRASEVLREM---KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGM 358
Query: 265 SMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMD 321
+T H L K A LI + + V D++ Y +I+G C+ ++A
Sbjct: 359 VPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFA 418
Query: 322 FLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYC 381
+ M + P TY L+ RK + + ++ +G P + N+L+ +C
Sbjct: 419 LHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHC 478
Query: 382 RSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVG 441
+ A+ LLK+M P V YN L+ G+CG E A EM G
Sbjct: 479 AIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK------FEEARELMGEMKRRG 532
Query: 442 VVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ + ++ + G + AF V EM+S GF P + TY+
Sbjct: 533 IKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYN 576
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 94/235 (40%), Gaps = 38/235 (16%)
Query: 183 EQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIV 242
E +REI+++ + N+LI YCQ+G A + G + ++ TY +L+ V
Sbjct: 382 EILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYV 441
Query: 243 FLRAEK-----------------------------------LDTAYLVHREMSNLGYSMD 267
R K +D A+ + +EM + + D
Sbjct: 442 LCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPD 501
Query: 268 SFTLGCFAHSLCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFEEAMDFLN 324
T C LC GK+ +A L+ ++ PD I Y +ISG + + A +
Sbjct: 502 DVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRD 561
Query: 325 RMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHA 379
M + P ++TY LL G + ++ + +L M EG P+ F S++ A
Sbjct: 562 EMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD
Length = 816
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 135/322 (41%), Gaps = 44/322 (13%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N L++ + G+ A L +KD G+ T++ L + EK + A V+ +
Sbjct: 288 NTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVD 347
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE---EFVPDTILYTKMISG--------- 309
G M+++T ++LCK GK A ++ +E VP+ ++Y MI G
Sbjct: 348 SGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVG 407
Query: 310 --------------------------LCEASLFEEAMDFLNRMRANSCIPNVVTYRILLC 343
CE E A +N+M+ P+V TY IL+
Sbjct: 408 ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIG 467
Query: 344 GCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
G RK + +C IL M G P+ + +L++ C+ A + + M G P
Sbjct: 468 GYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 527
Query: 404 GYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFE 463
+YN+LI G C S +E A EML+ G+ LN V + L GK
Sbjct: 528 KVRIYNMLIDGCC------SKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLS 581
Query: 464 KAFNVIREMMSKGFIPDIGTYS 485
+A +++ E+ KG PD+ TY+
Sbjct: 582 EAEDLLLEISRKGLKPDVFTYN 603
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 128/287 (44%), Gaps = 13/287 (4%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LIR++C+ G A +E+ ++K G S TYN L+ + R + D + + +EM +
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED 487
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
G + + G + LCK K +A + +E P +Y +I G C E+
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIED 547
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A F M N+VTY L+ G +L + +L + +G P +NSL+
Sbjct: 548 AFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLIS 607
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
Y + + L ++M + G +P Y++LI +C E +EL E + EM
Sbjct: 608 GYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEG------IELTERLFGEM- 659
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ + + + C G EKAFN+ ++M+ K D TY+
Sbjct: 660 --SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYN 704
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 34/253 (13%)
Query: 265 SMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMD 321
S DS TL L K ++R + + I + +F P +Y K I + S + ++
Sbjct: 143 SSDSLTL--LLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLE 200
Query: 322 FLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYC 381
NRM+ + P+V Y +L+ G + K++ +++ M+ PS +N+L+ YC
Sbjct: 201 LFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYC 260
Query: 382 RSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN---ED----LPSMDVL------- 427
++ + ++K+ ++M +P + +N L+ G+ ED L M L
Sbjct: 261 KAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAF 320
Query: 428 ------------ELAETA---YSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREM 472
E AE A Y ++ GV +N S LC GK EKA ++
Sbjct: 321 TFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGRE 380
Query: 473 MSKGFIPDIGTYS 485
M+KG +P+ Y+
Sbjct: 381 MAKGLVPNEVIYN 393
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 127/309 (41%), Gaps = 50/309 (16%)
Query: 217 ALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAH 276
LE R+K S YN L+ + ++++ A + EM T
Sbjct: 198 GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLID 257
Query: 277 SLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIP 333
CKAG + + E+ + P I + ++ GL +A + E+A + L M+ +P
Sbjct: 258 GYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP 317
Query: 334 NVVTYRILL------------------------------CGCL-----RKKQLGRCKRIL 358
+ T+ IL C L ++ ++ + + IL
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377
Query: 359 SLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
+ +G P+ I+N+++ YCR D A ++ M K G +P ++ YN LI C
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC-- 435
Query: 419 EDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGK---FEKAFNVIREMMSK 475
+ +E AE ++M GV +V + + G G+ F+K F++++EM
Sbjct: 436 ----ELGEMENAEKEVNKMKLKGV---SPSVETYNILIGGYGRKYEFDKCFDILKEMEDN 488
Query: 476 GFIPDIGTY 484
G +P++ +Y
Sbjct: 489 GTMPNVVSY 497
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 98/255 (38%), Gaps = 44/255 (17%)
Query: 269 FTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNR 325
F LCK + DA L ++ +P I Y +I G C+A E++ R
Sbjct: 215 FIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRER 274
Query: 326 MRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSP--------------- 370
M+A+ P+++T+ LL G + + + +L M G P
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 371 -----GIFNS---------------LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNI 410
G++ + L++A C+ A ++L + + G P V+YN
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 411 LIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIR 470
+I G C DL A M + G+ + + + R C +G+ E A +
Sbjct: 395 MIDGYCRKGDLVG------ARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVN 448
Query: 471 EMMSKGFIPDIGTYS 485
+M KG P + TY+
Sbjct: 449 KMKLKGVSPSVETYN 463
>AT1G71060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26805651-26807183 REVERSE
Length = 510
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 177/417 (42%), Gaps = 36/417 (8%)
Query: 81 SLLESKFDTGKRSNDAVLISNAILNNDDGFGSKTQKFLRQFREKLSESLVAEVLNLVKNP 140
S +E++ S DA I + D SK + L + KLS +L+ EVL + N
Sbjct: 51 SSVETQVSANDASQDAERICKILTKFTD---SKVETLLNEASVKLSPALIEEVLKKLSNA 107
Query: 141 E-LGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGK 199
L + F WA Q G+ HT + YNAL IES ++ + ++K K++L K
Sbjct: 108 GVLALSVFKWAENQKGFKHTTSNYNAL---IESLGKIKQFKLIWSLVDDMK--AKKLLSK 162
Query: 200 LLNVLI-RKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
LI R+Y + A+ ++++FG+K +N ++ ++ + A V +
Sbjct: 163 ETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDK 222
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE---------FVPDTILYTKMISG 309
M + D ++++ G W L L+ +E F PD + Y +I+
Sbjct: 223 MKKKRFEPD-----IKSYTILLEG-WGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINA 276
Query: 310 LCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPS 369
C+A +EEA+ F N M +C P+ + L+ G +K+L G
Sbjct: 277 HCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLE 336
Query: 370 PGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLEL 429
+N+LV AYC S+ AYK + +M G P Y+I++ L M +
Sbjct: 337 APTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIIL------HHLIRMQRSKE 390
Query: 430 AETAYSEM-LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
A Y M E V ++ V R C + + A + EM KG +P + +S
Sbjct: 391 AYEVYQTMSCEPTVSTYEIMV----RMFCNKERLDMAIKIWDEMKGKGVLPGMHMFS 443
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 35/189 (18%)
Query: 215 NAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCF 274
N ALE R K G+ TYNALV + +++++ AY EM G ++ T
Sbjct: 319 NDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDII 378
Query: 275 AHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPN 334
H L + + ++A +Y M SC P
Sbjct: 379 LHHLIRMQRSKEAYE------------VYQTM-----------------------SCEPT 403
Query: 335 VVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLK 394
V TY I++ K++L +I M +G P +F+SL+ A C A +
Sbjct: 404 VSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFN 463
Query: 395 KMVKCGCQP 403
+M+ G +P
Sbjct: 464 EMLDVGIRP 472
>AT1G12300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4184163-4186076 REVERSE
Length = 637
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 144/306 (47%), Gaps = 11/306 (3%)
Query: 184 QFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF 243
+ LR++++ + ++ +++I C++G + A ++ G + +TYN L+ F
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 244 LRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDT 300
A + D + R+M + + T S K GK R+A L ++ PDT
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 301 ILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSL 360
I YT +I G C+ + ++A ++ M + C PN+ T+ IL+ G + ++ +
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 361 MIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN-E 419
M + G +N+L+ +C + A +L ++MV P V Y IL+ G+C N E
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 420 DLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIP 479
++++ E E + E L++G+ N+ +C K + A+++ + KG P
Sbjct: 489 SEKALEIFEKIEKSKME-LDIGI----YNI--IIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Query: 480 DIGTYS 485
+ TY+
Sbjct: 542 GVKTYN 547
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 125/320 (39%), Gaps = 44/320 (13%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N+LI +C G W+ + L + + +T++ L+ F++ KL A +H+EM +
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 262 LGYSMDSFTL--------------------------GC---------FAHSLCKAGKWRD 286
G + D+ T GC + CKA + D
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 287 ALTLIEKEEF---VPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLC 343
L L K V DT+ Y +I G CE A + M + PN+VTY+ILL
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 344 GCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
G + + I + GI+N ++H C + A+ L + G +P
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541
Query: 404 GYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFE 463
G YNI+IGG+C L AE + +M E G + + R G G
Sbjct: 542 GVKTYNIMIGGLCKKGPLSE------AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDAT 595
Query: 464 KAFNVIREMMSKGFIPDIGT 483
K+ +I E+ GF D T
Sbjct: 596 KSVKLIEELKRCGFSVDAST 615
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 135/288 (46%), Gaps = 9/288 (3%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
L+++I +C+ A +G++ GY+ + +T++ L+ ++ A + M
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE-EF--VPDTILYTKMISGLCEASLFE 317
+G+ D T+ + LC +GK +A+ LI+K E+ P+ + Y +++ +C++
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
AM+ L +M + + V Y I++ G + L + + M M+G + +N L+
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
+C + + KLL+ M+K P V +++LI L AE + EM
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE------AEELHKEM 359
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ G+ + + ++ C +KA ++ M+SKG P+I T++
Sbjct: 360 IHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN 407
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 124/256 (48%), Gaps = 11/256 (4%)
Query: 234 LTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKW---RDALTL 290
+ ++ L + ++ D + ++M G + + +TL + C+ K A+
Sbjct: 89 IDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK 148
Query: 291 IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCG-CLRKK 349
I K + P+TI ++ +I+GLC EA++ ++RM P+++T L+ G CL K
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGK 208
Query: 350 QLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYN 409
+ ++ M+ GC P+ + +++ C+S + A +LL+KM + + V Y+
Sbjct: 209 E-AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 410 ILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVI 469
I+I G+C + L + A ++EM G+ N + + C G+++ ++
Sbjct: 268 IIIDGLCKHGSLDN------AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 470 REMMSKGFIPDIGTYS 485
R+M+ + P++ T+S
Sbjct: 322 RDMIKRKINPNVVTFS 337
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 3/205 (1%)
Query: 199 KLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
+ N+LI YC+ + LE ++ G A +TYN L+ F KL+ A + +E
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASL 315
M + + T LC G+ AL + IEK + D +Y +I G+C AS
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 523
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
++A D + P V TY I++ G +K L + + M +G P +N
Sbjct: 524 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNI 583
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCG 400
L+ A+ D + + KL++++ +CG
Sbjct: 584 LIRAHLGDGDATKSVKLIEELKRCG 608
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 85/181 (46%), Gaps = 7/181 (3%)
Query: 305 KMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIME 364
++ SGL + ++A+D M + +P V+ + L + KQ + M ++
Sbjct: 59 RLRSGLVDIKA-DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELK 117
Query: 365 GCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSM 424
G + + +++ +CR R A+ + K++K G +P + ++ LI G+C +
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS-- 175
Query: 425 DVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+ LEL + M+E+G + + ++ LC GK +A +I +M+ G P+ TY
Sbjct: 176 EALELVD----RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231
Query: 485 S 485
Sbjct: 232 G 232
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 297 VPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILL-CGCLRKKQLGRCK 355
+P I ++++ S + + ++ + +M N+ T I++ C C R ++L
Sbjct: 85 LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC-RCRKLCLAF 143
Query: 356 RILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
+ +I G P+ F++L++ C S A +L+ +MV+ G +P + N L+ G+
Sbjct: 144 SAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL 203
Query: 416 C--GNEDL---------------------PSMDVL------ELAETAYSEMLEVGVVLNK 446
C G E P ++V+ LA +M E + L+
Sbjct: 204 CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 447 VNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
V S LC G + AFN+ EM KG +I TY+
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYN 302
>AT3G16710.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 10
plant structures; EXPRESSED DURING: LP.10 ten leaves
visible, petal differentiation and expansion stage, D
bilateral stage, E expanded cotyledon stage; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G41170.1); Has 25882 Blast hits to 6002
proteins in 187 species: Archae - 3; Bacteria - 22;
Metazoa - 744; Fungi - 522; Plants - 23419; Viruses - 0;
Other Eukaryotes - 1172 (source: NCBI BLink). |
chr3:5690020-5691543 FORWARD
Length = 507
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 132/314 (42%), Gaps = 32/314 (10%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
L+ YC A+ ++ G+K + +TY L+ + L+ A + +M G
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG 218
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAM 320
+ T LC+ G+W DA L+ K P+ I +T +I + EA
Sbjct: 219 SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAK 278
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
+ N M S P+V TY L+ G L +++ LM GC+P+ I+ +L+H +
Sbjct: 279 ELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGF 338
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC-------------------GNEDL 421
C+S+ K+ +M + G + Y +LI G C D+
Sbjct: 339 CKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398
Query: 422 PSMDVL----------ELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIRE 471
+ +VL E A + M + + +N V + + +C +GK E AF++
Sbjct: 399 RTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCS 458
Query: 472 MMSKGFIPDIGTYS 485
+ SKG P++ TY+
Sbjct: 459 LFSKGMKPNVITYT 472
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 122/286 (42%), Gaps = 9/286 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N L+ C+ G W A L + + + +T+ AL+ F++ KL A ++ M
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 262 LGYSMDSFTLGCFAHSLCKAG---KWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
+ D FT G + LC G + R L+E+ P+ ++YT +I G C++ E+
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
M M + N +TY +L+ G + + + + M P +N L+
Sbjct: 347 GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
C + A + + M K V Y I+I G+C + D +L + +S+ +
Sbjct: 407 GLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE--DAFDLFCSLFSKGM 464
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+ V+ +S F C G +A ++ ++M GF+P+ Y
Sbjct: 465 KPNVITYTTMISGF----CRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 120/287 (41%), Gaps = 13/287 (4%)
Query: 206 RKYCQNGL----WNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
RK +NGL +N AL+ R+ S + + L+ V + + D + +M
Sbjct: 52 RKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQI 111
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
LG T H +C + + A L + K F PD + +T +++G C + E+
Sbjct: 112 LGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIED 171
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ +++ PNVVTY L+ + + L + + M G P+ +N+LV
Sbjct: 172 AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVT 231
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
C + A LL+ M+K +P + + LI + + L A+ Y+ M+
Sbjct: 232 GLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI------DAFVKVGKLMEAKELYNVMI 285
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
++ V + + LC G ++A + M G P+ Y+
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYT 332
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 3/177 (1%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ LI +C++ ++ + G A+ +TY L+ + + D A V +M
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLF 316
S+ D T LC GK AL + E K E + + YT +I G+C+
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIF 373
E+A D + + PNV+TY ++ G R+ + + M +G P+ ++
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 3/141 (2%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
VLI+ YC G + A E ++ TYN L+ K++ A ++ M
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
++ T +CK GK DA L + + P+ I YT MISG C L E
Sbjct: 427 REMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHE 486
Query: 319 AMDFLNRMRANSCIPNVVTYR 339
A +M+ + +PN Y+
Sbjct: 487 ADSLFKKMKEDGFLPNESVYK 507
>AT1G55630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20791817-20793250 REVERSE
Length = 477
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 188/446 (42%), Gaps = 67/446 (15%)
Query: 57 EDPMSL--DNSRMESISSKEFSFLRDSLLESKFDTGKRSNDAVLISNAILNNDDGFGSKT 114
E+P+ + ++S M+ +E + + S+ + ++ K S VL + + + GF +K+
Sbjct: 41 EEPLKITWESSEMDCEFDQEENGEKISVRKRFMESTKLSASRVL--DTLQQDCPGFNTKS 98
Query: 115 QKFLRQFREKLSESLVAEVL----------NLVKNPELGIKFFIWAGRQIGYSHTQAVYN 164
L + +S LV EVL N + +L KFF+W G Q + HT Y+
Sbjct: 99 A--LDELNVSISGLLVREVLVGILRTLSFDNKTRCAKLAYKFFVWCGGQENFRHTANCYH 156
Query: 165 ALLEMI-ESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGR 223
L+++ E + R+ ++ +++ N+LI + GL +E+ +
Sbjct: 157 LLMKIFAECGEYKAMCRLIDEMIKD----GYPTTACTFNLLICTCGEAGLARDVVEQFIK 212
Query: 224 LKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGK 283
K F Y+ + +YNA++ L ++ V+ +M G++ D T + + GK
Sbjct: 213 SKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGK 272
Query: 284 WRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRI 340
L++ K+ F PD Y ++ L + A++ LN MR P V+ +
Sbjct: 273 TDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTT 332
Query: 341 LLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCG 400
L+ G R +L CK + + VK G
Sbjct: 333 LIDGLSRAGKLEACKYFMD-----------------------------------ETVKVG 357
Query: 401 CQPGYVVYNILIGG-ICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGV 459
C P V Y ++I G I G E LE AE + EM E G + N ++ R C
Sbjct: 358 CTPDVVCYTVMITGYISGGE-------LEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMA 410
Query: 460 GKFEKAFNVIREMMSKGFIPDIGTYS 485
GKF++A +++EM S+G P+ YS
Sbjct: 411 GKFKEACALLKEMESRGCNPNFVVYS 436
>AT2G06000.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 125/287 (43%), Gaps = 37/287 (12%)
Query: 199 KLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
K N+LIR C G ALE LG + FG + +TYN L+ F ++ +L+ A + ++
Sbjct: 207 KTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD 266
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
+ + S+C PD + YT MISG C+A E
Sbjct: 267 VK--------------SGSVCS-----------------PDVVTYTSMISGYCKAGKMRE 295
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A L+ M P VT+ +L+ G + ++ + I MI GCFP F SL+
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
YCR S ++L ++M G P Y+ILI +C L L L + A +++
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL-LGQLASKDII 414
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ N V + F C GK +A ++ EM K PD T++
Sbjct: 415 PQPFMYNPV-IDGF----CKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 150/357 (42%), Gaps = 15/357 (4%)
Query: 133 VLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDE 192
V L NP +G +F+ ++ ++ H+ YN L S + Q +K +
Sbjct: 76 VKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLL---TRSLCKAGLHDLAGQMFECMKSD 132
Query: 193 DKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTA 252
+LL L+ + + G + A L L+ F + + N+L+ ++ ++++ A
Sbjct: 133 GVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDA 190
Query: 253 YLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV---PDTILYTKMISG 309
+ E D+ T LC GK AL L+ PD + Y +I G
Sbjct: 191 MKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQG 250
Query: 310 LCEASLFEEAMDFLNRMRANS-CIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFP 368
C+++ +A + +++ S C P+VVTY ++ G + ++ +L M+ G +P
Sbjct: 251 FCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYP 310
Query: 369 SPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLE 428
+ FN LV Y ++ + A ++ KM+ GC P V + LI G C + +
Sbjct: 311 TNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC------RVGQVS 364
Query: 429 LAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ EM G+ N S LC + KA ++ ++ SK IP Y+
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYN 421
>AT2G06000.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:2328000-2329610 REVERSE
Length = 536
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 125/287 (43%), Gaps = 37/287 (12%)
Query: 199 KLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
K N+LIR C G ALE LG + FG + +TYN L+ F ++ +L+ A + ++
Sbjct: 207 KTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD 266
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
+ + S+C PD + YT MISG C+A E
Sbjct: 267 VK--------------SGSVCS-----------------PDVVTYTSMISGYCKAGKMRE 295
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A L+ M P VT+ +L+ G + ++ + I MI GCFP F SL+
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
YCR S ++L ++M G P Y+ILI +C L L L + A +++
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL-LGQLASKDII 414
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ N V + F C GK +A ++ EM K PD T++
Sbjct: 415 PQPFMYNPV-IDGF----CKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 150/357 (42%), Gaps = 15/357 (4%)
Query: 133 VLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDE 192
V L NP +G +F+ ++ ++ H+ YN L S + Q +K +
Sbjct: 76 VKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLL---TRSLCKAGLHDLAGQMFECMKSD 132
Query: 193 DKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTA 252
+LL L+ + + G + A L L+ F + + N+L+ ++ ++++ A
Sbjct: 133 GVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVEDA 190
Query: 253 YLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV---PDTILYTKMISG 309
+ E D+ T LC GK AL L+ PD + Y +I G
Sbjct: 191 MKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQG 250
Query: 310 LCEASLFEEAMDFLNRMRANS-CIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFP 368
C+++ +A + +++ S C P+VVTY ++ G + ++ +L M+ G +P
Sbjct: 251 FCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYP 310
Query: 369 SPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLE 428
+ FN LV Y ++ + A ++ KM+ GC P V + LI G C + +
Sbjct: 311 TNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYC------RVGQVS 364
Query: 429 LAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ EM G+ N S LC + KA ++ ++ SK IP Y+
Sbjct: 365 QGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYN 421
>AT1G63080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23388884-23390728 REVERSE
Length = 614
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 132/287 (45%), Gaps = 9/287 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N++I C+ + AL LG++ GY S +T N+L+ F ++ A + +M
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
+GY D+ T H L + K +A+ L+E+ + PD + Y +I+GLC+ +
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A++ LN+M +VV Y ++ + + + + + M +G P ++SL+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
C +S A +LL M++ P V +N LI L AE + EM+
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE------AEKLFDEMI 337
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ + N V ++ C + ++A + M+SK +PD+ TY+
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 384
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 9/288 (3%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
LN L+ +C + A+ + ++ + GY+ +T+ LV + K A + M
Sbjct: 138 LNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMV 197
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFE 317
G D T G + LCK G+ AL L+ EK + D ++Y+ +I LC+ +
Sbjct: 198 VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVD 257
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
+A++ M P+V TY L+ + R+LS M+ P+ FNSL+
Sbjct: 258 DALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI 317
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
A+ + A KL +M++ P V YN LI G C + D L+ A+ ++ M
Sbjct: 318 DAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH------DRLDEAQQIFTLM 371
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ + + V + C K + R+M +G + + TY+
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 156/401 (38%), Gaps = 72/401 (17%)
Query: 153 QIGYSHTQAVYNALLEMIESTNNNSND-RIPEQFLREIKDEDKEVLGKLLNVLIRKYCQN 211
++GY + L+ + N S + E+ + + D G ++N L C+
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL----CKR 218
Query: 212 GLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTL 271
G + AL L +++ +A + Y+ ++ + +D A + EM N G D FT
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 272 GCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRA 328
LC G+W DA L+ + + P+ + + +I + EA + M
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 329 NSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSR---- 384
S PN+VTY L+ G +L ++I +LM+ + C P +N+L++ +C+++
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 385 -------------------------------DYSYAYKLLKKMVKCGCQPGYVVYNILIG 413
D A + K+MV G P + YN L+
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 414 GICGNEDL-PSMDVLELAETA--------YSEMLE--------------------VGVVL 444
G+C N L +M V E + + Y+ M E GV
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Query: 445 NKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ + + C G E+A+ + +M G +PD GTY+
Sbjct: 519 DVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYN 559
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 3/201 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI +C+ +E + G + +TY L+ F +A D A +V ++M +
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
G + T LCK GK A+ + E K + PD Y M G+C+A E+
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
D + P+V+ Y ++ G +K + M +G P G +N+L+
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563
Query: 379 AYCRSRDYSYAYKLLKKMVKC 399
A+ R D + + +L+K+M C
Sbjct: 564 AHLRDGDKAASAELIKEMRSC 584
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 93/214 (43%), Gaps = 13/214 (6%)
Query: 277 SLCKAGKWRDALTLIEKEEFV---PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIP 333
++ K K+ ++ EK E + + Y MI+ LC S A+ L +M P
Sbjct: 74 AIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGP 133
Query: 334 NVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLL 393
++VT LL G ++ ++ M+ G P F +LVH + S A L+
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 394 KKMVKCGCQPGYVVYNILIGGIC--GNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSN 451
++MV GCQP V Y +I G+C G DL L L +E VV+ S
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDL----ALNLLNKMEKGKIEADVVI----YST 245
Query: 452 FARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
LC + A N+ EM +KG PD+ TYS
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 116/287 (40%), Gaps = 9/287 (3%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
N LI + + G A + + + +TYN+L+ F ++LD A + M
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFE 317
+ D T + CKA K D + L + + V +T+ YT +I G +AS +
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
A +M ++ PN++TY LL G + +L + + + P +N +
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMS 492
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
C++ + L + G +P + YN +I G C + E A T + +M
Sbjct: 493 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKK------GLKEEAYTLFIKM 546
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
E G + + + R G + +I+EM S F D TY
Sbjct: 547 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
>AT1G63230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23451144-23452201 FORWARD
Length = 323
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 13/285 (4%)
Query: 191 DEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLD 250
+E + G ++N L C+ G +AL L ++++ KA + YNA++ +
Sbjct: 38 EEGHQPYGTIINGL----CKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHI 93
Query: 251 TAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMI 307
A + EM + G D T S C++G+W DA L+ + + PD + ++ +I
Sbjct: 94 HAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALI 153
Query: 308 SGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCF 367
+ L + EA + M P +TY ++ G ++ +L KR+L M + C
Sbjct: 154 NALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCS 213
Query: 368 PSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVL 427
P F++L++ YC+++ ++ +M + G V Y LI G C DL +
Sbjct: 214 PDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDA---- 269
Query: 428 ELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREM 472
A+ + M+ GV N + + LC + KAF ++ ++
Sbjct: 270 --AQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 92/198 (46%), Gaps = 3/198 (1%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
+I +C++G W A + L + + +T++AL+ ++ K+ A ++ +M G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAM 320
+ T CK + DA +++ + PD + ++ +I+G C+A + M
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
+ M + N VTY L+ G + L + +L++MI G P+ F S++ +
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 381 CRSRDYSYAYKLLKKMVK 398
C ++ A+ +L+ + K
Sbjct: 297 CSKKELRKAFAILEDLQK 314
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 100/230 (43%), Gaps = 13/230 (5%)
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASL 315
M G D T + LC G+ AL L+++ E P Y +I+GLC+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
E A++ L++M +VV Y ++ + + + + M +G FP ++
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYS 435
++ ++CRS ++ A +LL+ M++ P V ++ LI + + AE Y
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSE------AEEIYG 170
Query: 436 EMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ML G+ + ++ C + A ++ M SK PD+ T+S
Sbjct: 171 DMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFS 220
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 96/246 (39%), Gaps = 32/246 (13%)
Query: 272 GCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLCEASLFEEAMDFLNRMRA 328
G + LCK G AL L+ K E ++Y +I LC+ A + M
Sbjct: 45 GTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHD 104
Query: 329 NSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSY 388
P+V+TY ++ R + +++L MI P F++L++A + S
Sbjct: 105 KGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSE 164
Query: 389 AYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLP--------------SMDVLELAE--- 431
A ++ M++ G P + YN +I G C + L S DV+ +
Sbjct: 165 AEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLIN 224
Query: 432 ------------TAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIP 479
+ EM G+V N V + C VG + A +++ M+S G P
Sbjct: 225 GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAP 284
Query: 480 DIGTYS 485
+ T+
Sbjct: 285 NYITFQ 290
>AT5G01110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:42114-44303 REVERSE
Length = 729
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 125/318 (39%), Gaps = 44/318 (13%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI Y GL A E + + G+ TYN ++ + K + A V EM
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 262 LGYSMDSFTLGCFAHSLCKAG------------KWRDAL--------------------- 288
G S DS T CK G + RD +
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDK 393
Query: 289 -----TLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLC 343
+++ +PD ++YT +I G C + AM+ N M C +VVTY +L
Sbjct: 394 ALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Query: 344 GCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
G ++K LG ++ + M FP L+ +C+ + A +L +KM + +
Sbjct: 454 GLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL 513
Query: 404 GYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFE 463
V YN L+ G D ++ A+ +++M+ ++ ++ S LC G
Sbjct: 514 DVVTYNTLLDGFGKVGD------IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 567
Query: 464 KAFNVIREMMSKGFIPDI 481
+AF V EM+SK P +
Sbjct: 568 EAFRVWDEMISKNIKPTV 585
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 129/289 (44%), Gaps = 9/289 (3%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ ++LIR Y Q A E L+ G+ S NAL+ +R ++ A+ V++E+
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLF 316
S G ++ +TL ++LCK GK L+ ++++ PD + Y +IS L
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
EEA + +N M P V TY ++ G + + R K + + M+ G P + SL
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
+ C+ D K+ M P V ++ ++ + +L + A ++
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNL------DKALMYFNS 400
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ E G++ + V + + C G A N+ EM+ +G D+ TY+
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYN 449
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 129/289 (44%), Gaps = 7/289 (2%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ +LI+ YC+ G+ + A+ + G +TYN ++ + + L A + EM
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLF 316
+ DS+TL CK G ++A+ L +K + D + Y ++ G +
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
+ A + M + +P ++Y IL+ K L R+ MI + P+ I NS+
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
+ YCRS + S L+KM+ G P + YN LI G E++ L + E
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSK--AFGLVKKMEEE 649
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ G+V + ++ C + ++A V+R+M+ +G PD TY+
Sbjct: 650 --QGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYT 696
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 11/246 (4%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
L +LI +C+ G A+E ++K+ + +TYN L+ F + +DTA + +M
Sbjct: 483 LTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFE 317
+ + ++LC G +A + ++ + P ++ MI G C +
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 602
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIME--GCFPSPGIFNS 375
+ FL +M + +P+ ++Y L+ G +R++ + + ++ M E G P +NS
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYS 435
++H +CR A +L+KM++ G P Y +I G S D L A +
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFV------SQDNLTEAFRIHD 716
Query: 436 EMLEVG 441
EML+ G
Sbjct: 717 EMLQRG 722
>AT3G48810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18097048-18099027 FORWARD
Length = 659
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 150/347 (43%), Gaps = 18/347 (5%)
Query: 142 LGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLL 201
L + FF + HT + ++ + + D + + L+++K + L
Sbjct: 58 LALHFFKSIANSNLFKHTPLTFEVMIRKL--AMDGQVDSV-QYLLQQMKLQGFHCSEDLF 114
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
+I Y Q GL A+E R+K+FG S YN ++ L ++ Y+V+R+M
Sbjct: 115 ISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKR 174
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
G+ + FT +LCK K A L + + PD + YT +IS +CE L +E
Sbjct: 175 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE 234
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
+ R P V Y L+ G ++ ++ M+ +G P+ +++L++
Sbjct: 235 GRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLIN 289
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
C S A+ L +M+K GC P + L+ G C + D L+L +++M+
Sbjct: 290 VLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKG-CFLRG-TTFDALDL----WNQMI 343
Query: 439 E-VGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
G+ N V + + C G KA +V M G P+I TY
Sbjct: 344 RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTY 390
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 132/309 (42%), Gaps = 22/309 (7%)
Query: 187 REIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRA 246
RE+ + + V+ + N LI C+ + A E + + + G + ++Y+ L+ V +
Sbjct: 236 RELAERFEPVVS-VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNS 294
Query: 247 EKLDTAYLVHREMSNLG-----YSMDSFTLGCFAHSLCKAGKWRDALTL----IEKEEFV 297
+++ A+ +M G Y++ S GCF G DAL L I
Sbjct: 295 GQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLR-----GTTFDALDLWNQMIRGFGLQ 349
Query: 298 PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRI 357
P+ + Y ++ G C +A+ + M C PN+ TY L+ G ++ L I
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYI 409
Query: 358 LSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICG 417
+ M+ GC P+ ++ ++V A CR + A L++ M K C P +N I G+C
Sbjct: 410 WNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLC- 468
Query: 418 NEDLPSMDVLELAETAYSEMLEVG-VVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKG 476
L+ AE + +M + N V + L + E+A+ + RE+ +G
Sbjct: 469 -----DAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 523
Query: 477 FIPDIGTYS 485
TY+
Sbjct: 524 VEWSSSTYN 532
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 10/289 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N L++ +C +G A+ +++ G + TY +L+ F + LD A + +M
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT 415
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
G + +LC+ K+++A +LIE KE P + I GLC+A +
Sbjct: 416 SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 475
Query: 319 AMDFLNRM-RANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
A +M + + C PN+VTY LL G + ++ + + M G S +N+L+
Sbjct: 476 AEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLP-SMDVLELAETAYSE 436
H C + A +L+ KM+ G P + N++I C + +L+L +
Sbjct: 536 HGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRK 595
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ ++ +N LC E ++ M+S G +P I T+S
Sbjct: 596 WRP-----DVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWS 639
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 89/214 (41%), Gaps = 36/214 (16%)
Query: 302 LYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLM 361
L+ +IS + L E A++ R++ C P+V Y +L L + ++ + M
Sbjct: 113 LFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDM 172
Query: 362 IMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYV--------------- 406
+G P+ +N L+ A C++ A KLL +M GC P V
Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLV 232
Query: 407 ---------------VYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSN 451
VYN LI G+C D EL EM+E G+ N ++ S
Sbjct: 233 KEGRELAERFEPVVSVYNALINGLCKEHDYKG--AFELMR----EMVEKGISPNVISYST 286
Query: 452 FARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
LC G+ E AF+ + +M+ +G P+I T S
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLS 320
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 75/184 (40%), Gaps = 37/184 (20%)
Query: 161 AVYNALLEMIESTNNNSNDRIPEQF--LREIKDEDKEVLGKLLNVLIRKYCQNGLWNAAL 218
YN LL+ + N RI E + REI E N L+ C GL AL
Sbjct: 494 VTYNELLDGLAKAN-----RIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIAL 548
Query: 219 EELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSL 278
+ +G++ G +T N +++ + + K + A + +S
Sbjct: 549 QLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVS------------------ 590
Query: 279 CKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTY 338
C KWR PD I YT +I GLC ++ E+ + L RM + +P++ T+
Sbjct: 591 CGRRKWR------------PDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATW 638
Query: 339 RILL 342
+L+
Sbjct: 639 SVLI 642
>AT3G16890.1 | Symbols: PPR40 | PPR40 (PENTATRICOPEPTIDE (PPR)
DOMAIN PROTEIN 40) | chr3:5768401-5770380 REVERSE
Length = 659
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 106/455 (23%), Positives = 175/455 (38%), Gaps = 80/455 (17%)
Query: 103 ILNNDDGFGSKTQKFLRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAV 162
++ D F Q+F R L+ V VL NP ++F++W S+ V
Sbjct: 53 VIERKDWFLILNQEFTTH-RIGLNTRFVISVLQNQDNPLHSLRFYLWV------SNFDPV 105
Query: 163 YNALLEMIESTNNNSNDR-----IPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAA 217
Y A + ++S N+ R + + L+EI+D + +L+ VLI + + GL
Sbjct: 106 Y-AKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYC 164
Query: 218 LEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHS 277
+ ++ G K S YNA++ +++ LD AYL ++M + G D FT H
Sbjct: 165 NDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHG 224
Query: 278 LCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPN 334
+CK G +A+ L+ E+E P+ YT +I G A +EA+ L MR PN
Sbjct: 225 VCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPN 284
Query: 335 VVTYRILLCG----------------------------------CLRKKQLGR-CKRILS 359
T R + G CL + + + L
Sbjct: 285 EATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLR 344
Query: 360 LMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC--- 416
+ G P FN+ + + D ++ V G +PG+ Y +L+ +
Sbjct: 345 KIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQ 404
Query: 417 ----GNEDLPSMDVLELAETAYS----------------------EMLEVGVVLNKVNVS 450
G+ L M V L + YS EM + G+ N V +
Sbjct: 405 RFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFN 464
Query: 451 NFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
F G +K V+ +++ GF PD+ T+S
Sbjct: 465 TFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFS 499
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 3/191 (1%)
Query: 228 GYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA 287
G +S +YNA++ +A +++ A + EM + G S + T F G +
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV 479
Query: 288 LTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCG 344
++EK F PD I ++ +I+ LC A ++A D M PN +TY IL+
Sbjct: 480 HGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRS 539
Query: 345 CLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPG 404
C R ++ + M G P +N+ + ++C+ R A +LLK M++ G +P
Sbjct: 540 CCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPD 599
Query: 405 YVVYNILIGGI 415
Y+ LI +
Sbjct: 600 NFTYSTLIKAL 610
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 6/183 (3%)
Query: 303 YTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMI 362
Y +I LC+A E A FL M+ PN+VT+ L G + + + +L ++
Sbjct: 428 YNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLL 487
Query: 363 MEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLP 422
+ G P F+ +++ CR+++ A+ K+M++ G +P + YNILI C D
Sbjct: 488 VHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGD-- 545
Query: 423 SMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIG 482
+ + +++M E G+ + + + C + K +KA +++ M+ G PD
Sbjct: 546 ----TDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNF 601
Query: 483 TYS 485
TYS
Sbjct: 602 TYS 604
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE
Length = 634
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 128/288 (44%), Gaps = 22/288 (7%)
Query: 214 WNAALEELGRLKDF------GYKASRL-------TYNALVIVFLRAEKLDTAYLVHREMS 260
+N L + ++K F G K RL TYN L+ F R ++ A + +M
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFE 317
LGY TL + C + DA+ L+++ + PDTI +T +I GL +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
EA+ ++RM C PN+VTY +++ G ++ +L+ M IFN+++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
+ C+ R A L K+M G +P V Y+ LI +C S A S+M
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC------SYGRWSDASQLLSDM 321
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+E + N V + GKF +A + +M+ + PDI TY+
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 127/289 (43%), Gaps = 11/289 (3%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVI-VFLRAEKLDTAYLVHREM 259
L+ L+ YC + A+ + ++ + GY+ +T+ L+ +FL + + LV R M
Sbjct: 158 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR-M 216
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV---PDTILYTKMISGLCEASLF 316
G + T G + LCK G AL L+ K E D +++ +I LC+
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
++A++ M PNVVTY L+ + ++LS MI + P+ FN+L
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
+ A+ + + A KL M+K P YN L+ G C + D L+ A+ +
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH------DRLDKAKQMFEF 390
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
M+ + V + + C + E + REM +G + D TY+
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 3/201 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI+ +C++ E + G +TY L+ D A V ++M +
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
G D T LC GK AL + ++K E D +YT MI G+C+A ++
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
D + PNVVTY ++ G K+ L +L M +G P+ G +N+L+
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Query: 379 AYCRSRDYSYAYKLLKKMVKC 399
A+ R D + + +L+++M C
Sbjct: 584 AHLRDGDKAASAELIREMRSC 604
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 127/321 (39%), Gaps = 44/321 (13%)
Query: 203 VLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNL 262
V++ C+ G + AL L +++ +A + +N ++ + +D A + +EM
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 289
Query: 263 GYSMDSFTLGCFAHSLCKAGKWRDALTL----IEKE-------------------EFV-- 297
G + T LC G+W DA L IEK+ +FV
Sbjct: 290 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 349
Query: 298 -------------PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCG 344
PD Y +++G C ++A M + C P+VVTY L+ G
Sbjct: 350 EKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKG 409
Query: 345 CLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPG 404
+ K++ + M G + +L+ D A K+ K+MV G P
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 405 YVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEK 464
+ Y+IL+ G+C N LE A + M + + L+ + +C GK +
Sbjct: 470 IMTYSILLDGLCNNGK------LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 465 AFNVIREMMSKGFIPDIGTYS 485
+++ + KG P++ TY+
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYN 544
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 123/287 (42%), Gaps = 13/287 (4%)
Query: 206 RKYCQNGLWNAALEE----LGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
R+ +NGL + L++ G + S + +N L+ + +K D + +M
Sbjct: 54 REILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQR 113
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE---EFVPDTILYTKMISGLCEASLFEE 318
L +T + C+ + AL L+ K + P + + +++G C +
Sbjct: 114 LEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 173
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ +++M P+ +T+ L+ G + ++ M+ GC P+ + +V+
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
C+ D A LL KM + V++N +I +C + D L L + EM
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD--DALNL----FKEME 287
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
G+ N V S+ CLC G++ A ++ +M+ K P++ T++
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 334
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 112/285 (39%), Gaps = 9/285 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI + + G + A + + TYN+LV F ++LD A + M +
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVS 393
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
D T CK+ + D L + V DT+ YT +I GL +
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 453
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A +M ++ P+++TY ILL G +L + + M I+ +++
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
C++ + L + G +P V YN +I G+C S +L+ A +M
Sbjct: 514 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC------SKRLLQEAYALLKKMK 567
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGT 483
E G + N + R G + +IREM S F+ D T
Sbjct: 568 EDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612
>AT1G03560.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:890428-892410 REVERSE
Length = 660
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 179/407 (43%), Gaps = 23/407 (5%)
Query: 92 RSNDAVLIS---NAILNNDDGFGSKTQK---FLRQFREKLSESLVAEVLN---LVKNPEL 142
+SN +L S + ILN DG S F R+F KLS + V+ VL + + P++
Sbjct: 75 KSNRNLLPSPWVSQILNLLDGSASMESNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDI 134
Query: 143 GIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLR-EIKDEDKEVLGKLL 201
FF W+ +Q Y+H Y +L++++ + DRI +F+ EIK + +
Sbjct: 135 AWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDV--DRI--RFVSSEIKKFEFPMTVSAA 190
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI+ + + G+ L ++K+ G + + TYN L+ + A +D+A V M +
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
D T CKAG+ + A L +E D I Y MI S F
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
+ M + +++ G ++ +L + MI +G P+ I+ L+
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
Y +S A +LL +M+ G +P V Y++++ G+C N + + L+ T +
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVE--EALDYFHTCRFD-- 426
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
G+ +N + S+ L G+ ++A + EM KG D Y+
Sbjct: 427 --GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYN 471
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 131/318 (41%), Gaps = 45/318 (14%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N +I+ YC+ G A+E+L ++ G++A ++TY ++ + +++EM
Sbjct: 261 NTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDE 320
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---------------------------- 293
G + LCK GK + T+ E
Sbjct: 321 KGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVED 380
Query: 294 ----------EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLC 343
E F PD + Y+ +++GLC+ EEA+D+ + R + N + Y L+
Sbjct: 381 AIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLID 440
Query: 344 GCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKM-VKCGCQ 402
G + ++ +R+ M +GC +N+L+ A+ + R A L K+M + GC
Sbjct: 441 GLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCD 500
Query: 403 PGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKF 462
Y IL+ G+ ++ + + L+L + M++ G+ + LC GK
Sbjct: 501 QTVYTYTILLSGMF--KEHRNEEALKL----WDMMIDKGITPTAACFRALSTGLCLSGKV 554
Query: 463 EKAFNVIREMMSKGFIPD 480
+A ++ E+ G I D
Sbjct: 555 ARACKILDELAPMGVILD 572
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 97/226 (42%), Gaps = 7/226 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
+V++ C+NG AL+ + G + + Y++L+ +A ++D A + EMS
Sbjct: 401 SVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSE 460
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTI-LYTKMISGLCEASLFE 317
G + DS+ + K K +A+ L +E+EE T+ YT ++SG+ + E
Sbjct: 461 KGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNE 520
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
EA+ + M P +R L G ++ R +IL + G ++
Sbjct: 521 EALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAAC-EDMI 579
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI--CGNEDL 421
+ C++ A KL + + G + + ++I + G DL
Sbjct: 580 NTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADL 625
>AT4G31850.1 | Symbols: PGR3 | PGR3 (PROTON GRADIENT REGULATION 3) |
chr4:15403020-15406358 FORWARD
Length = 1112
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 146/322 (45%), Gaps = 9/322 (2%)
Query: 167 LEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKD 226
+ +++ ++N + +QF E++ + +L+ C+ G + A + L ++D
Sbjct: 332 ITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRD 391
Query: 227 FGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRD 286
G + TYN L+ LR +LD A + M +LG ++T F K+G
Sbjct: 392 QGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVS 451
Query: 287 ALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLC 343
AL EK + P+ + + L +A EA ++ +P+ VTY +++
Sbjct: 452 ALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMK 511
Query: 344 GCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
+ ++ ++LS M+ GC P + NSL++ ++ A+K+ +M + +P
Sbjct: 512 CYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP 571
Query: 404 GYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFE 463
V YN L+ G+ N + + +EL E M++ G N + + CLC +
Sbjct: 572 TVVTYNTLLAGLGKNGKI--QEAIELFEG----MVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 464 KAFNVIREMMSKGFIPDIGTYS 485
A ++ +MM G +PD+ TY+
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYN 647
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 125/287 (43%), Gaps = 15/287 (5%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
+ IR + G N A E L R+ D G +TY L+ A KLD A V +M
Sbjct: 261 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMK 320
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTL------IEKEEFVPDTILYTKMISGLCEAS 314
+ D T + L + RD ++ +EK+ VPD + +T ++ LC+A
Sbjct: 321 TGRHKPDRVT---YITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAG 377
Query: 315 LFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFN 374
F EA D L+ MR +PN+ TY L+CG LR +L + M G P+ +
Sbjct: 378 NFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYI 437
Query: 375 SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAY 434
+ Y +S D A + +KM G P V N + L A+ +
Sbjct: 438 VFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL------YSLAKAGRDREAKQIF 491
Query: 435 SEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDI 481
+ ++G+V + V + +C VG+ ++A ++ EMM G PD+
Sbjct: 492 YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 3/219 (1%)
Query: 203 VLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNL 262
V I Y ++G +ALE ++K G + + NA + +A + A + + ++
Sbjct: 438 VFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDI 497
Query: 263 GYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEA 319
G DS T K G+ +A+ L+ + PD I+ +I+ L +A +EA
Sbjct: 498 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA 557
Query: 320 MDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHA 379
RM+ P VVTY LL G + ++ + M+ +GC P+ FN+L
Sbjct: 558 WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDC 617
Query: 380 YCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
C++ + + A K+L KM+ GC P YN +I G+ N
Sbjct: 618 LCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 123/319 (38%), Gaps = 34/319 (10%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N+LI + + A + ++K G TYN L+ + ++ K+D + +++EMS
Sbjct: 789 NLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMST 848
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL----IEKEEFVPDTILYTKMISGLCEASLFE 317
++ T L KAG DAL L + +F P Y +I GL ++
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
EA M C PN Y IL+ G + + + M+ EG P ++ LV
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVL---------- 427
C K++ + G P V YN++I G+ + L VL
Sbjct: 969 DCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGI 1028
Query: 428 --------------------ELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFN 467
E A Y+E+ G+ N + R GK E A+
Sbjct: 1029 TPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYA 1088
Query: 468 VIREMMSKGFIPDIGTYSK 486
V + M++ GF P+ GTY +
Sbjct: 1089 VYQTMVTGGFSPNTGTYEQ 1107
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 9/232 (3%)
Query: 257 REMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEA 313
R+M G+ +++++ H L K+ +A+ + + E F P Y+ ++ GL +
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR 236
Query: 314 SLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIF 373
+ M L M PNV T+ I + R ++ IL M EGC P +
Sbjct: 237 RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 374 NSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETA 433
L+ A C +R A ++ +KM +P V Y L+ N DL S+ +
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSV------KQF 350
Query: 434 YSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+SEM + G V + V + LC G F +AF+ + M +G +P++ TY+
Sbjct: 351 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYN 402
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 115/276 (41%), Gaps = 11/276 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N L+ +NG A+E + G + +T+N L + +++ A + +M +
Sbjct: 577 NTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD 636
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE--KEEFVPDTILYTKMISGLCEASLFEEA 319
+G D FT L K G+ ++A+ K+ PD + ++ G+ +ASL E+A
Sbjct: 637 MGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDA 696
Query: 320 MDFLNRMRANSC-IPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEG-CFPSPGIFNSLV 377
+ N P + + L+ L + + ++ G C I ++
Sbjct: 697 YKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPII 756
Query: 378 HAYCRSRDYSYAYKLLKKMVK-CGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
C+ + S A L +K K G QP YN+LIGG L D++E+A+ + +
Sbjct: 757 RYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGG------LLEADMIEIAQDVFLQ 810
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREM 472
+ G + + + GK ++ F + +EM
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 91/249 (36%), Gaps = 50/249 (20%)
Query: 279 CKAGKWRDALTLIEKEE----FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPN 334
CK A TL EK P Y +I GL EA + E A D ++++ CIP+
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 335 VVTYRILLCGCLRKKQLGRCKRILSLMIMEGC---------------------------- 366
V TY LL + ++ + M C
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYY 879
Query: 367 --------FPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI--C 416
P+ + L+ +S A +L + M+ GC+P +YNILI G
Sbjct: 880 DLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKA 939
Query: 417 GNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKG 476
G D A + M++ GV + S CLC VG+ ++ + +E+ G
Sbjct: 940 GEAD--------AACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 477 FIPDIGTYS 485
PD+ Y+
Sbjct: 992 LNPDVVCYN 1000
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 4/212 (1%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
LI ++G A + + D+G + + YN L+ F +A + D A + + M G
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 956
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAM 320
D T LC G+ + L +++ PD + Y +I+GL ++ EEA+
Sbjct: 957 VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEAL 1016
Query: 321 DFLNRMRANSCI-PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHA 379
N M+ + I P++ TY L+ + +I + + G P+ FN+L+
Sbjct: 1017 VLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRG 1076
Query: 380 YCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
Y S +AY + + MV G P Y L
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 4/181 (2%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ N+LI + + G +AA R+ G + TY+ LV ++D +E+
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE----FVPDTILYTKMISGLCEASL 315
G + D + L K+ + +AL L + + PD Y +I L A +
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
EEA N ++ PNV T+ L+ G + + M+ G P+ G +
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1107
Query: 376 L 376
L
Sbjct: 1108 L 1108
>AT5G15010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4857361-4858959 FORWARD
Length = 532
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 180/437 (41%), Gaps = 70/437 (16%)
Query: 99 ISNAILNNDDGFGSKTQKFL----RQFREKLSE-------SLVAEVLNLVKNP-ELGIKF 146
IS+ +++ D G SK K ++ R KL E LV E+L+ V+N E F
Sbjct: 48 ISDELVSEDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTF 107
Query: 147 FIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIR 206
F+WAG+Q GY + Y++++ ++ +R K V + L ++IR
Sbjct: 108 FVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMR--KFSPSLVNSQTLLIMIR 165
Query: 207 KYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKL-DTAYL----------- 254
KYC A+ K F + + +L+ R + + D +L
Sbjct: 166 KYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFD 225
Query: 255 -----------------------VHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL- 290
V EM N+G D + K G L L
Sbjct: 226 AKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLF 285
Query: 291 --IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCI-PNVVTYRILLCGCLR 347
++KE PD +Y ++ L +AS EA + + M I PNVVTY L+ +
Sbjct: 286 DRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCK 345
Query: 348 KKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRS-RDYSYAYKLLKKMVKCGCQPGYV 406
++ K++ M+ +G FP+ + HA+ R R ++LL KM K GC+P
Sbjct: 346 ARKTEEAKQVFDEMLEKGLFPTIRTY----HAFMRILRTGEEVFELLAKMRKMGCEPTVE 401
Query: 407 VYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGV---GKFE 463
Y +LI +C D ++ +L + EM E V ++S++ + G+ GK E
Sbjct: 402 TYIMLIRKLCRWRDFDNVLLL------WDEMKEKTV---GPDLSSYIVMIHGLFLNGKIE 452
Query: 464 KAFNVIREMMSKGFIPD 480
+A+ +EM KG P+
Sbjct: 453 EAYGYYKEMKDKGMRPN 469
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 104/258 (40%), Gaps = 22/258 (8%)
Query: 198 GKLLNVLIRKYCQN-GLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVH 256
K N+++ +C G A + + G K ++Y++++ + + L+ +
Sbjct: 226 AKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLF 285
Query: 257 REMSNLGYSMDSFTLGCFAHSLCKAG---KWRDALTLIEKEEFV-PDTILYTKMISGLCE 312
M D H+L KA + R+ + +E+E+ + P+ + Y +I LC+
Sbjct: 286 DRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCK 345
Query: 313 ASLFEEAMDFLNRMRANSCIPNVVTY----RILLCGCLRKKQLGRCKRILSLMIMEGCFP 368
A EEA + M P + TY RIL G +L+ M GC P
Sbjct: 346 ARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTG-------EEVFELLAKMRKMGCEP 398
Query: 369 SPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLE 428
+ + L+ CR RD+ L +M + P Y ++I G+ N +E
Sbjct: 399 TVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGK------IE 452
Query: 429 LAETAYSEMLEVGVVLNK 446
A Y EM + G+ N+
Sbjct: 453 EAYGYYKEMKDKGMRPNE 470
>AT1G63330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23489628-23491519 FORWARD
Length = 558
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 134/318 (42%), Gaps = 34/318 (10%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVI-VFLRAEKLDTAYLVHREM 259
L+ L+ YC + A+ + ++ + GY+ +T+ L+ +FL + + LV R M
Sbjct: 82 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR-M 140
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV---PDTILYTKMISGLCEASLF 316
G + T G + LCK G A L+ K E D +++ +I LC+
Sbjct: 141 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 200
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
++A++ M PNVVTY L+ + ++LS MI + P+ FN+L
Sbjct: 201 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 260
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDL--------------- 421
+ A+ + + A KL M+K P YN LI G C ++ L
Sbjct: 261 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 320
Query: 422 -PSMDV-------------LELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFN 467
P +D +E + EM G+V + V + + L G + A
Sbjct: 321 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 380
Query: 468 VIREMMSKGFIPDIGTYS 485
V ++M+S G PDI TYS
Sbjct: 381 VFKQMVSDGVPPDIMTYS 398
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 142/350 (40%), Gaps = 67/350 (19%)
Query: 203 VLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNL 262
V++ C+ G + A L +++ +A + +N ++ + +D A + +EM
Sbjct: 154 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 213
Query: 263 GYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEA 319
G + T LC G+W DA L+ +++ P+ + + +I + F EA
Sbjct: 214 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 273
Query: 320 MDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHA 379
+ M S P++ TY L+ G +L + K++ M+ + CFP +N+L+
Sbjct: 274 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 333
Query: 380 YCRSR-----------------------------------DYSYAYKLLKKMVKCGCQPG 404
+C+S+ D A K+ K+MV G P
Sbjct: 334 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 393
Query: 405 YVVYNILIGGICGNEDL-PSMDVLELAETA--------YSEMLE---------------- 439
+ Y+IL+ G+C N L +++V + + + Y+ M+E
Sbjct: 394 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 453
Query: 440 ----VGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
GV N V + LC ++A+ ++++M G +PD GTY+
Sbjct: 454 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYN 503
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 3/201 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI+ +C++ E + G +TY L+ D A V ++M +
Sbjct: 328 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 387
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
G D T LC GK AL + ++K E D +YT MI G+C+A ++
Sbjct: 388 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 447
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
D + PNVVTY ++ G K+ L +L M +G P G +N+L+
Sbjct: 448 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 507
Query: 379 AYCRSRDYSYAYKLLKKMVKC 399
A+ R D + + +L+++M C
Sbjct: 508 AHLRDGDKAASAELIREMRSC 528
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 6/190 (3%)
Query: 296 FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCK 355
+ P + + +++G C +A+ +++M P+ +T+ L+ G +
Sbjct: 75 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 134
Query: 356 RILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
++ M+ GC P+ + +V+ C+ D A+ LL KM + V++N +I +
Sbjct: 135 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 194
Query: 416 CGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSK 475
C + D L L + EM G+ N V S+ CLC G++ A ++ +M+ K
Sbjct: 195 CKYRHVD--DALNL----FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 248
Query: 476 GFIPDIGTYS 485
P++ T++
Sbjct: 249 KINPNLVTFN 258
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 283 KWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE--AMDFLNRMRANSCIPNVVT 337
K DA+ L + K +P + K++S + + F+ ++ L +M P++VT
Sbjct: 22 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVT 81
Query: 338 YRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMV 397
LL G K++ ++ M+ G P F +L+H S A L+ +MV
Sbjct: 82 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141
Query: 398 KCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLC 457
+ GCQP V Y +++ G+C D ++LA ++M + + V + LC
Sbjct: 142 QRGCQPNLVTYGVVVNGLCKRGD------IDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195
Query: 458 GVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ A N+ +EM +KG P++ TYS
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYS 223
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 3/181 (1%)
Query: 235 TYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK- 293
TYN L+ F ++++++ + REMS+ G D+ T L G +A + ++
Sbjct: 326 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 385
Query: 294 --EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQL 351
+ PD + Y+ ++ GLC E+A++ + M+ + ++ Y ++ G + ++
Sbjct: 386 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 445
Query: 352 GRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
+ + ++G P+ +N+++ C R AY LLKKM + G P YN L
Sbjct: 446 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 505
Query: 412 I 412
I
Sbjct: 506 I 506
>AT3G06920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2181717-2184449 FORWARD
Length = 871
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 141/327 (43%), Gaps = 17/327 (5%)
Query: 152 RQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQN 211
R+ + + Y L+ + N++ + +++++ E L LIR + +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSD---MMLTLFQQMQELGYEPTVHLFTTLIRGFAKE 216
Query: 212 GLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTL 271
G ++AL L +K A + YN + F + K+D A+ E+ G D T
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276
Query: 272 GCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRA 328
LCKA + +A+ + +EK VP T Y MI G A F+EA L R RA
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 329 NSCIPNVVTYRILLCGCLRKKQLGRCKRILSLM--IMEGCFPSPGIFNSLVHAYCRSRDY 386
IP+V+ Y +L CLRK +G+ L + + + P+ +N L+ CR+
Sbjct: 337 KGSIPSVIAYNCILT-CLRK--MGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKL 393
Query: 387 SYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNK 446
A++L M K G P NI++ +C ++ L A + EM ++
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE------ACAMFEEMDYKVCTPDE 447
Query: 447 VNVSNFARCLCGVGKFEKAFNVIREMM 473
+ + L VG+ + A+ V +M+
Sbjct: 448 ITFCSLIDGLGKVGRVDDAYKVYEKML 474
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 104/231 (45%), Gaps = 4/231 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N++I +C+ G N A + L +K G++ + +TY +++ + ++LD AY++ E +
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
++ K G+ +A ++E ++ P+ + ++ L +A E
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ M+ C PN VTY IL+ G + ++ + M +G PS + +++
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMIS 770
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC-GNEDLPSMDVLE 428
++ + + A L + G P YN +I G+ GN + + + E
Sbjct: 771 GLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 134/342 (39%), Gaps = 27/342 (7%)
Query: 162 VYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGL-------- 213
VY +L+ TN+ + + F + ED K+ +I + C L
Sbjct: 469 VYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH---KIYKDMINQNCSPDLQLLNTYMD 525
Query: 214 --WNAALEELGRLKDFGYKASRL-----TYNALVIVFLRAEKLDTAYLVHREMSNLGYSM 266
+ A E GR KA R +Y+ L+ ++A + Y + M G +
Sbjct: 526 CMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVL 585
Query: 267 DSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFL 323
D+ CK GK A L+E+ + F P + Y +I GL + +EA
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 324 NRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRS 383
++ NVV Y L+ G + ++ IL ++ +G P+ +NSL+ A ++
Sbjct: 646 EEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKA 705
Query: 384 RDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVV 443
+ + A + M + C P V Y ILI G+C V + EM + G+
Sbjct: 706 EEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF------WQEMQKQGMK 759
Query: 444 LNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ ++ + L G +A + + G +PD Y+
Sbjct: 760 PSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYN 801
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 160/410 (39%), Gaps = 42/410 (10%)
Query: 110 FGSKTQKFLRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALL-E 168
+G + L K V VL +K+ I++F W R+ H YN+LL
Sbjct: 48 WGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLV 107
Query: 169 MIESTNNNSNDRIPEQ-----FLREIKDEDKEVLG-----KL-----LNVLIRKYCQNGL 213
M N ++ D+I + F + + VLG KL + ++RK+
Sbjct: 108 MARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPA 167
Query: 214 WNAALEELG----------------RLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHR 257
++A +G ++++ GY+ + + L+ F + ++D+A +
Sbjct: 168 FSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLD 227
Query: 258 EMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEAS 314
EM + D S K GK A IE PD + YT MI LC+A+
Sbjct: 228 EMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKAN 287
Query: 315 LFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFN 374
+EA++ + N +P Y ++ G + +L +G PS +N
Sbjct: 288 RLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYN 347
Query: 375 SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAY 434
++ + A K+ ++M K P YNILI +C L + EL ++
Sbjct: 348 CILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDT--AFELRDS-- 402
Query: 435 SEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
M + G+ N V+ LC K ++A + EM K PD T+
Sbjct: 403 --MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITF 450
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 104/259 (40%), Gaps = 19/259 (7%)
Query: 235 TYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFT-----LGCFAHSLCKAGKWR---D 286
+YN+L++V R D + EMS G+ T LGC KA K R D
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCV-----KANKLREGYD 154
Query: 287 ALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCL 346
+ ++ K +F P YT +I + + + +M+ P V + L+ G
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFA 214
Query: 347 RKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYV 406
++ ++ +L M ++N + ++ + A+K ++ G +P V
Sbjct: 215 KEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEV 274
Query: 407 VYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAF 466
Y +IG +C + L+ A + + + V + GKF++A+
Sbjct: 275 TYTSMIGVLC------KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 467 NVIREMMSKGFIPDIGTYS 485
+++ +KG IP + Y+
Sbjct: 329 SLLERQRAKGSIPSVIAYN 347
>AT3G07290.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2321740-2324382 REVERSE
Length = 880
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 173/413 (41%), Gaps = 72/413 (17%)
Query: 118 LRQFREKLSESLVAEVLNLVKNP-ELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTN-N 175
L+ ++ ++ ++V++L ++ ++ ++FF+W + Y N LL++I S+
Sbjct: 60 LKSLVSHMNPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLY 119
Query: 176 NSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLT 235
+ ++E +KE+L KL+ YC + L FG++ +
Sbjct: 120 RVAHAVIVALIKECSRCEKEML-KLM------YCFDELREV----------FGFRLNYPC 162
Query: 236 YNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAG------------- 282
Y++L++ + + AY+ +R M G+ + ++LCK G
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 283 ----------------------KWRDALTLIE---KE-EFVPDTILYTKMISGLCEASLF 316
RDAL + + KE P+++ Y+ +I GLCE
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
EEA ++M C P+ TY +L+ + + + + MI GC P+ + L
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVL 342
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN-EDLPSMDVLELAETAYS 435
+ CR A + +KMVK P + YN LI G C + +P+ ++L + E
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402
Query: 436 EMLEVGVVLNKVNVSNFARC---LCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
K NV F LC VGK KA ++++ M+ G PDI +Y+
Sbjct: 403 ----------KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYN 445
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 121/264 (45%), Gaps = 17/264 (6%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
NVLI C+ G N A + L + F + LT+ A++ F + K D A M
Sbjct: 445 NVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLR 504
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTK-----MISGLCEASLF 316
G S+D T +CK GK RDAL ++E V IL T ++ L +
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILET--LVKMRILTTPHSLNVILDMLSKGCKV 562
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
+E + L ++ +P+VVTY L+ G +R + RIL LM + GC P+ + +
Sbjct: 563 KEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTII 622
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLP-SMDVL-------- 427
++ C+ A KLL M G P +V Y +++ G N L +++ +
Sbjct: 623 INGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGY 682
Query: 428 ELAETAYSEMLEVGVVLNKVNVSN 451
EL + YS +L+ G VL++ + N
Sbjct: 683 ELNDRIYSSLLQ-GFVLSQKGIDN 705
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 128/286 (44%), Gaps = 17/286 (5%)
Query: 199 KLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
+ N L+ C+ G A+ L R+ D G ++YN L+ R ++TAY +
Sbjct: 407 RTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSS 466
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASL 315
M+ D T ++ CK GK A L L+ ++ D + T +I G+C+
Sbjct: 467 MNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGK 526
Query: 316 FEEA---MDFLNRMRANSCIPNV-VTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPG 371
+A ++ L +MR + ++ V +L GC K++L +I L G PS
Sbjct: 527 TRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKL----GLVPSVV 582
Query: 372 IFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAE 431
+ +LV RS D + ++++L+ M GC P Y I+I G+C +E AE
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLC------QFGRVEEAE 636
Query: 432 TAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGF 477
S M + GV N V + + GK ++A +R M+ +G+
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGY 682
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 15/290 (5%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
VLI+ C GL + A + G K + TY L+ R K++ A V R+M
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
T + CK G+ A LT++EK P+ + +++ GLC +
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCF---PSPGIFNS 375
A+ L RM N P++V+Y +L+ G R+ + ++LS M CF P F +
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM---NCFDIEPDCLTFTA 481
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYS 435
+++A+C+ A L M++ G V LI G+C + + D L + ET
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVC--KVGKTRDALFILET--- 536
Query: 436 EMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
++++ ++ +++ L K ++ ++ ++ G +P + TY+
Sbjct: 537 -LVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYT 585
>AT1G62930.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT1G63130.1); Has
29147 Blast hits to 6292 proteins in 192 species: Archae
- 8; Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants
- 25291; Viruses - 0; Other Eukaryotes - 1710 (source:
NCBI BLink). | chr1:23306534-23308423 FORWARD
Length = 629
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 129/289 (44%), Gaps = 11/289 (3%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVI-VFLRAEKLDTAYLVHREM 259
L+ L+ YC + A+ + ++ Y+ + +T+N L+ +FL + + L+ R M
Sbjct: 153 LSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDR-M 211
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLF 316
G D FT G + LCK G AL+L+ EK + D ++YT +I LC
Sbjct: 212 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNV 271
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
+A++ M PNVVTY L+ + R+LS MI P+ F++L
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
+ A+ + A KL +M+K P Y+ LI G C + D L+ A+ +
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH------DRLDEAKHMFEL 385
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
M+ N V + + C + E+ + REM +G + + TY+
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 118/257 (45%), Gaps = 9/257 (3%)
Query: 232 SRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLI 291
S + +N L+ + K D + M NL S D ++ + C+ + AL ++
Sbjct: 79 SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 292 EKE---EFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRK 348
K + PD + + +++G C EA+ +++M PN VT+ L+ G
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH 198
Query: 349 KQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVY 408
+ ++ M+ GC P + ++V+ C+ D A LLKKM K + V+Y
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 409 NILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNV 468
+I +C +++ D L L ++EM G+ N V ++ RCLC G++ A +
Sbjct: 259 TTIIDALCNYKNVN--DALNL----FTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312
Query: 469 IREMMSKGFIPDIGTYS 485
+ +M+ + P++ T+S
Sbjct: 313 LSDMIERKINPNVVTFS 329
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 3/202 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI+ +C+ +E + G + +TYN L+ +A D A + ++M +
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
G D T LCK GK AL + E K + PD Y MI G+C+A E+
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
D + PNV+ Y ++ G RK + M +G P+ G +N+L+
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Query: 379 AYCRSRDYSYAYKLLKKMVKCG 400
A R D + + +L+K+M CG
Sbjct: 579 ARLRDGDKAASAELIKEMRSCG 600
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 117/266 (43%), Gaps = 9/266 (3%)
Query: 223 RLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAG 282
R+++ +YN L+ F R +L A V +M LGY D TL + C
Sbjct: 105 RMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGK 164
Query: 283 KWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYR 339
+ +A+ L+++ E+ P+T+ + +I GL + EA+ ++RM A C P++ TY
Sbjct: 165 RISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYG 224
Query: 340 ILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKC 399
++ G ++ + +L M I+ +++ A C ++ + A L +M
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Query: 400 GCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGV 459
G +P V YN LI +C A S+M+E + N V S
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSD------ASRLLSDMIERKINPNVVTFSALIDAFVKE 338
Query: 460 GKFEKAFNVIREMMSKGFIPDIGTYS 485
GK +A + EM+ + PDI TYS
Sbjct: 339 GKLVEAEKLYDEMIKRSIDPDIFTYS 364
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 131/350 (37%), Gaps = 67/350 (19%)
Query: 203 VLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNL 262
++ C+ G + AL L +++ +A + Y ++ + ++ A + EM N
Sbjct: 225 TVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
Query: 263 GYSMDSFTLGCFAHSLCKAGKWRDALTLIE------------------------------ 292
G + T LC G+W DA L+
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 293 --------KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCG 344
K PD Y+ +I+G C +EA M + C PNVVTY L+ G
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 345 CLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPG 404
+ K++ + M G + +N+L+ ++ D A K+ KKMV G P
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 405 YVVYNILIGGICGNEDL-PSMDVLELAETA--------YSEMLE---------------- 439
+ Y+IL+ G+C L ++ V E + + Y+ M+E
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 440 ----VGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
GV N + + C G E+A + REM G +P+ GTY+
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYN 574
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 124/322 (38%), Gaps = 44/322 (13%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LIR C G W+ A L + + + +T++AL+ F++ KL A ++ EM
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
D FT + C + +A + E ++ P+ + Y +I G C+A EE
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 319 AMDFLNRM--------------------RANSC---------------IPNVVTYRILLC 343
M+ M +A C P+++TY ILL
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 344 GCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
G + +L + + + P +N ++ C++ + L + G +P
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 404 GYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFE 463
++Y +I G C + E A+ + EM E G + N + R G
Sbjct: 534 NVIIYTTMISGFCRK------GLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 587
Query: 464 KAFNVIREMMSKGFIPDIGTYS 485
+ +I+EM S GF+ D T S
Sbjct: 588 ASAELIKEMRSCGFVGDASTIS 609
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 91/220 (41%), Gaps = 33/220 (15%)
Query: 297 VPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILL-CGCLRKKQLGRCK 355
+P + + K++S + + + F+ + RM+ ++ +Y IL+ C C R+ QL
Sbjct: 77 LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC-RRSQLPLAL 135
Query: 356 RILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
+L M+ G P +SL++ YC + S A L+ +M QP V +N LI G+
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195
Query: 416 C----GNEDLPSMDVLELAETAYSEMLEVGVVLNK------------------------- 446
+E + +D + +A ++ G V+N
Sbjct: 196 FLHNKASEAVALIDRM-VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 254
Query: 447 -VNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
V + LC A N+ EM +KG P++ TY+
Sbjct: 255 VVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
>AT4G11690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7056254-7057954 FORWARD
Length = 566
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 146/340 (42%), Gaps = 27/340 (7%)
Query: 156 YSHTQAVYNALLEMIESTNNNSNDRIPEQFLRE-------IKDEDKEVLGKLLNVLIRKY 208
+SH Q++ LL++I + +I QF + E + +L V+I Y
Sbjct: 55 FSHAQSL---LLQVI-------SGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSY 104
Query: 209 CQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDS 268
Q+ N ++ + D G+ +N L+ + + + + E + +D
Sbjct: 105 VQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKS-KVVLDV 163
Query: 269 FTLGCFAHSLCKAGKWRDALTL-IEKEEF--VPDTILYTKMISGLCEASLFEEAMDFLNR 325
++ G C+AG+ + L IE EF P+ ++YT +I G C+ E+A D
Sbjct: 164 YSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE 223
Query: 326 MRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRD 385
M + N TY +L+ G + + + M +G FP+ +N +++ C+
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283
Query: 386 YSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLN 445
A+++ +M + G V YN LIGG+C L A +M G+ N
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNE------ANKVVDQMKSDGINPN 337
Query: 446 KVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ + CGVGK KA ++ R++ S+G P + TY+
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYN 377
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 128/284 (45%), Gaps = 9/284 (3%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ LI C+ G A + + G A+ TY L+ + + ++ +M
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM 259
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE--KEEFVP-DTILYTKMISGLCEASLF 316
G + +T C + LCK G+ +DA + + +E V + + Y +I GLC
Sbjct: 260 QEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKL 319
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
EA +++M+++ PN++TY L+ G +LG+ + + G PS +N L
Sbjct: 320 NEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
V +CR D S A K++K+M + G +P V Y ILI ++++ L L+
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS------ 433
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
M E+G+V + S C G+ +A + + M+ K P+
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPN 477
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 3/218 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI C+ N A + + ++K G + +TYN L+ F KL A + R++ +
Sbjct: 307 NTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKS 366
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLCEASLFEE 318
G S T C+ G A ++++ E P + YT +I + E+
Sbjct: 367 RGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEK 426
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ M +P+V TY +L+ G K Q+ R+ M+ + C P+ I+N+++
Sbjct: 427 AIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMIL 486
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC 416
YC+ A KLLK+M + P Y +I +C
Sbjct: 487 GYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 3/181 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N+L+ +C+ G + A + + +++ G K S++TY L+ F R++ ++ A + M
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
LG D T H C G+ +A L + ++ P+ ++Y MI G C+
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR 496
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ L M PNV +YR ++ ++++ +R++ MI G PS I + +
Sbjct: 497 ALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISR 556
Query: 379 A 379
A
Sbjct: 557 A 557
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 3/213 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI +C G AL LK G S +TYN LV F R A + +EM
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
G T + ++ A+ L +E+ VPD Y+ +I G C E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A M +C PN V Y ++ G ++ R ++L M + P+ + ++
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
C+ R A +L++KM+ G P + +++
Sbjct: 522 VLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>AT2G16880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7312262-7314493 REVERSE
Length = 743
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 124/288 (43%), Gaps = 11/288 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDF-GYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
N+ ++ C+ A ++ L D G+ +TY+ L+ +L+ L A + REM
Sbjct: 384 NISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFE 317
G M++ TL +LCK K +A L+ K F+ D + Y +I G E
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
+A++ + M+ P V T+ L+ G + + G P FNS++
Sbjct: 504 KALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
YC+ A++ + +K +P NIL+ G+C + E A ++ +
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE------GMTEKALNFFNTL 617
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+E V + V + C K ++A++++ EM KG PD TY+
Sbjct: 618 IEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYN 664
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 131/293 (44%), Gaps = 14/293 (4%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLR---AEKLDTAYLVH 256
L ++ + Y G + AL+ ++ K + LT N L+I +R + + +A V
Sbjct: 133 LFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVF 192
Query: 257 REMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK--EEFV--PDTILYTKMISGLCE 312
+M +G S++ T + C GK DAL ++E+ EF PD + Y ++ + +
Sbjct: 193 DDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSK 252
Query: 313 ASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGI 372
+ + L M+ N +PN VTY L+ G + L +I+ LM P
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCT 312
Query: 373 FNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAET 432
+N L++ C + +L+ M QP V YN LI G C L S++ +L E
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG-CFELGL-SLEARKLME- 369
Query: 433 AYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMS-KGFIPDIGTY 484
+M GV N+V + + LC K E ++E++ GF PDI TY
Sbjct: 370 ---QMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTY 419
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 106/247 (42%), Gaps = 4/247 (1%)
Query: 184 QFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF 243
+ +RE+ + ++ LN ++ C+ + A L G+ +TY L++ F
Sbjct: 437 EMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGF 496
Query: 244 LRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDT 300
R EK++ A + EM + + T LC GK A+ + + +PD
Sbjct: 497 FREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDD 556
Query: 301 ILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSL 360
+ +I G C+ E+A +F N +S P+ T ILL G ++ + +
Sbjct: 557 STFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNT 616
Query: 361 MIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNED 420
+I E + +N+++ A+C+ + AY LL +M + G +P YN I + +
Sbjct: 617 LIEEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGK 675
Query: 421 LPSMDVL 427
L D L
Sbjct: 676 LSETDEL 682
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 6/161 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI C +G A+E+ L + G T+N++++ + + +++ A+ + E
Sbjct: 525 NSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIK 584
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDAL----TLIEKEEFVPDTILYTKMISGLCEASLFE 317
+ D++T + LCK G AL TLIE+ E DT+ Y MIS C+ +
Sbjct: 585 HSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLK 642
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRIL 358
EA D L+ M P+ TY + + +L +L
Sbjct: 643 EAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 10/192 (5%)
Query: 298 PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQ---LGRC 354
P L+ +S A+ +M PN++T LL G +R +
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 355 KRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMV-KCGCQPGYVVYNILIG 413
+ + M+ G + FN LV+ YC A +L++MV + P V YN ++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 414 GICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMM 473
+ L + L L +M + G+V N+V +N C +G ++AF ++ M
Sbjct: 249 AMSKKGRLSDLKELLL------DMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMK 302
Query: 474 SKGFIPDIGTYS 485
+PD+ TY+
Sbjct: 303 QTNVLPDLCTYN 314
>AT1G63150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23419399-23421288 FORWARD
Length = 629
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 135/287 (47%), Gaps = 9/287 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
++ I +C+ + AL L ++ GY+ +T ++L+ + ++++ A + +M
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
+GY D+FT H L K +A+ L++ + PD + Y +++GLC+ +
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A++ LN+M A NVV + ++ + + + + + M +G P+ +NSL++
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
C +S A +LL M++ P V +N LI L AE + EM+
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE------AEKLHEEMI 355
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ + + + + C + ++A + + M+SK +P+I TY+
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYN 402
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 9/288 (3%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
L+ L+ YC + + A+ + ++ + GYK T+ L+ K A + +M
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMV 215
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV---PDTILYTKMISGLCEASLFE 317
G D T G + LCK G AL L+ K E + +++ +I LC+ E
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
A+D M PNVVTY L+ + R+LS M+ + P+ FN+L+
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
A+ + A KL ++M++ P + YN+LI G C + + L+ A+ + M
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH------NRLDEAKQMFKFM 389
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ + N + C + E + REM +G + + TY+
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYT 437
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 115/257 (44%), Gaps = 9/257 (3%)
Query: 232 SRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLI 291
S + +N L+ + K + + +M LG S D +T F + C+ + AL ++
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 292 EKE---EFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRK 348
K + PD + + +++G C + +A+ +++M P+ T+ L+ G
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 349 KQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVY 408
+ ++ M+ GC P + ++V+ C+ D A LL KM + V++
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 409 NILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNV 468
N +I +C +E+A ++EM G+ N V ++ CLC G++ A +
Sbjct: 262 NTIIDSLCKYRH------VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRL 315
Query: 469 IREMMSKGFIPDIGTYS 485
+ M+ K P++ T++
Sbjct: 316 LSNMLEKKINPNVVTFN 332
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 116/266 (43%), Gaps = 9/266 (3%)
Query: 223 RLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAG 282
+++ G TY+ + F R +L A V +M LGY D TL + C +
Sbjct: 108 QMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSK 167
Query: 283 KWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYR 339
+ DA+ L+++ + PDT +T +I GL + EA+ +++M C P++VTY
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYG 227
Query: 340 ILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKC 399
++ G ++ + +L+ M + IFN+++ + C+ R A L +M
Sbjct: 228 TVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287
Query: 400 GCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGV 459
G +P V YN LI +C A S MLE + N V +
Sbjct: 288 GIRPNVVTYNSLINCLCNYGRWSD------ASRLLSNMLEKKINPNVVTFNALIDAFFKE 341
Query: 460 GKFEKAFNVIREMMSKGFIPDIGTYS 485
GK +A + EM+ + PD TY+
Sbjct: 342 GKLVEAEKLHEEMIQRSIDPDTITYN 367
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 6/202 (2%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI +C+ +E + G + +TY ++ F +A D+A +V ++M +
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
D T H LC GK AL + ++K E + +Y MI G+C+A E
Sbjct: 462 NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A D + S P+VVTY ++ G K+ L + M +G P+ G +N+L+
Sbjct: 522 AWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Query: 379 AYCRSRDYSYAYKLLKKMVKCG 400
A R D + + +L+K+M G
Sbjct: 579 ANLRDCDRAASAELIKEMRSSG 600
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/398 (20%), Positives = 153/398 (38%), Gaps = 69/398 (17%)
Query: 153 QIGYSHTQAVYNALLEMIESTNNNSND-RIPEQFLREIKDEDKEVLGKLLNVLIRKYCQN 211
++GY + L+ + N S + +Q ++ D G ++N L C+
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL----CKR 236
Query: 212 GLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTL 271
G + AL L +++ KA+ + +N ++ + ++ A + EM G + T
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 272 GCFAHSLCKAGKWRDALTLIE---------------------------------KEEFV- 297
+ LC G+W DA L+ EE +
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 298 ----PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGR 353
PDTI Y +I+G C + +EA M + C+PN+ TY L+ G + K++
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 354 CKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIG 413
+ M G + + +++ + ++ D A + K+MV + Y+IL+
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 414 GICGNEDLPSMDV---------LELAETAYSEMLE-----------------VGVVLNKV 447
G+C L + V +EL Y+ M+E + + + V
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVV 536
Query: 448 NVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ LC ++A ++ R+M G +P+ GTY+
Sbjct: 537 TYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYN 574
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 121/319 (37%), Gaps = 41/319 (12%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI C G W+ A L + + + +T+NAL+ F + KL A +H EM
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
D+ T + C + +A + + ++ +P+ Y +I+G C+ E+
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
++ M + N VTY ++ G + + + M+ ++ L+H
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 379 AYCRSRDYSYA---YKLLKK----------------MVKCG-------------CQPGYV 406
C A +K L+K M K G +P V
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVV 536
Query: 407 VYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAF 466
YN +I G+C S +L+ A+ + +M E G + N + R +
Sbjct: 537 TYNTMISGLC------SKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASA 590
Query: 467 NVIREMMSKGFIPDIGTYS 485
+I+EM S GF+ D T S
Sbjct: 591 ELIKEMRSSGFVGDASTIS 609
>AT5G61990.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24900186-24903110 REVERSE
Length = 974
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 128/289 (44%), Gaps = 9/289 (3%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ LI+ + QN + A+ L +K+ G YN+L+I +A+++D A EM
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLCEASLF 316
G ++FT G F +A ++ A +++ +P+ +L T +I+ C+
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
EA M + + TY +L+ G + ++ + I M +G P + L
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
++ + + + A + +MV+ G P ++YN+L+GG C + + +E A+ E
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE------IEKAKELLDE 687
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
M G+ N V C G +AF + EM KG +PD Y+
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 121/287 (42%), Gaps = 10/287 (3%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
LI +YC+ G A + D G TY L+ + +K+D A + REM G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAM 320
+ D F+ G + K G + A ++ ++ E P+ I+Y ++ G C + E+A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
+ L+ M PN VTY ++ G + L R+ M ++G P ++ +LV
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI--CGNEDLPSMDVLELAETAYSEML 438
CR D A + K GC +N LI + G +L + + L + ++
Sbjct: 743 CRLNDVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ N V + LC G E A + +M + +P + TY+
Sbjct: 802 KP----NDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 120/322 (37%), Gaps = 44/322 (13%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
+VLI C+ A L + G TY+ L+ L+ D A + EM +
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL------------------------------- 290
G ++ + C + K G A L
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400
Query: 291 -------IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLC 343
++K V Y ++ G+C + + A + + M A+ C PNVV Y L+
Sbjct: 401 GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460
Query: 344 GCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
L+ + G R+L M +G P +NSL+ +++ A L +MV+ G +P
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520
Query: 404 GYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFE 463
Y I G + S A+ EM E GV+ NKV + C GK
Sbjct: 521 NAFTYGAFISGYIEASEFAS------ADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 464 KAFNVIREMMSKGFIPDIGTYS 485
+A + R M+ +G + D TY+
Sbjct: 575 EACSAYRSMVDQGILGDAKTYT 596
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 116/285 (40%), Gaps = 9/285 (3%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
LI YC+ E L +K S TY +V + LD AY + +EM G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIE--KEE-FVPDTILYTKMISGLCEASLFEEAM 320
+ + + ++ DA+ +++ KE+ PD Y +I GL +A +EA
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
FL M N PN TY + G + + + + M G P+ + L++ Y
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEV 440
C+ A + MV G Y +L+ G+ N D ++ AE + EM
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN------DKVDDAEEIFREMRGK 621
Query: 441 GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
G+ + + +G +KA ++ EM+ +G P++ Y+
Sbjct: 622 GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 15/258 (5%)
Query: 233 RLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE 292
+ TY+ L+ + ++L+ A + EM +LG S+D+ T L K A L+
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336
Query: 293 KEEFVPDTI-----LYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLR 347
E V I +Y I + + + E+A + M A+ IP Y L+ G R
Sbjct: 337 --EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR 394
Query: 348 KKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVV 407
+K + + +L M SP + ++V C S D AY ++K+M+ GC+P V+
Sbjct: 395 EKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVI 454
Query: 408 YNILIGGICGNEDL-PSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAF 466
Y LI N +M VL+ EM E G+ + ++ L + ++A
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLK-------EMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 467 NVIREMMSKGFIPDIGTY 484
+ + EM+ G P+ TY
Sbjct: 508 SFLVEMVENGLKPNAFTY 525
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 114/309 (36%), Gaps = 69/309 (22%)
Query: 238 ALVIVFLRAEKLDTAYLVHREM--SNLGYSMDSFTLGCFAHSLCKAGK---WRDALTLIE 292
L+ LR +LD + V++ M N+ + + ++ + AH C+AG +D L E
Sbjct: 191 VLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAH--CRAGNVQLGKDVLFKTE 248
Query: 293 KE---------------------EFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSC 331
KE VP Y +I GLC+ E+A L M +
Sbjct: 249 KEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGV 308
Query: 332 IPNVVTYRILL---------------------------------CGCLRKKQ--LGRCKR 356
+ TY +L+ C C+ K+ + + K
Sbjct: 309 SLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKA 368
Query: 357 ILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC 416
+ MI G P + SL+ YCR ++ Y+LL +M K Y ++ G+C
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428
Query: 417 GNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKG 476
+ DL A EM+ G N V + + +F A V++EM +G
Sbjct: 429 SSGDLDG------AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 477 FIPDIGTYS 485
PDI Y+
Sbjct: 483 IAPDIFCYN 491
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 124/293 (42%), Gaps = 13/293 (4%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ N+L+ +C++G A E L + G + +TY ++ + ++ L A+ + EM
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEM 723
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLI--EKEEFVPDTILYTKMISGLCEASLFE 317
G DSF C+ A+T+ K+ T + +I+ + + E
Sbjct: 724 KLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTE 783
Query: 318 EAMDFLNRMRANS----CIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIF 373
+ LNR+ S PN VTY I++ ++ L K + M P+ +
Sbjct: 784 LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 374 NSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVL---ELA 430
SL++ Y + + + + + + G +P +++Y+++I VL A
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFA 903
Query: 431 ETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGT 483
+ A + ++ + + +S FA+ VG+ E A V+ M+ +IPD T
Sbjct: 904 KNAVDDGCKLSISTCRALLSGFAK----VGEMEVAEKVMENMVRLQYIPDSAT 952
>AT3G49730.1 | Symbols: | EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein
(TAIR:AT5G65820.1); Has 25923 Blast hits to 13097
proteins in 1477 species: Archae - 105; Bacteria - 3757;
Metazoa - 995; Fungi - 405; Plants - 17052; Viruses -
21; Other Eukaryotes - 3588 (source: NCBI BLink). |
chr3:18445730-18447646 REVERSE
Length = 638
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 188/456 (41%), Gaps = 72/456 (15%)
Query: 53 LFDPEDPMSLDNSRMESISSKEFSFLRDSLLESKF-DTGKRSNDAVLISNAILNNDDGFG 111
L + P S NSR++ I K F R +L + F ++ +R N L+ ++D F
Sbjct: 10 LLISKKPSSQANSRIDLIC-KRFHISR--VLNNDFVESTERKNGVGLVCPE--KHEDEFA 64
Query: 112 SKTQKFLRQFREK----------LSES-------LVAEVLNLVKNP-ELGIKFFIWAGRQ 153
+ +K R R L+ES L+ VL+ + LG +FF+WA +Q
Sbjct: 65 GEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQ 124
Query: 154 IGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVL-GKLLNVLIRKYCQNG 212
GY H+ V +++ ++ + E++ + E++ +L VL+R++
Sbjct: 125 PGYFHSYEVCKSMVMILSKMRQFG---AVWGLIEEMRKTNPELIEPELFVVLMRRFASAN 181
Query: 213 LWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLG 272
+ A+E L EM G D + G
Sbjct: 182 MVKKAVEVLD-----------------------------------EMPKYGLEPDEYVFG 206
Query: 273 CFAHSLCKAGKWRDALTLIE--KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANS 330
C +LCK G ++A + E +E+F P+ +T ++ G C EA + L +M+
Sbjct: 207 CLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 266
Query: 331 CIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRS-RDYSYA 389
P++V + LL G ++ +++ M G P+ + L+ A CR+ + A
Sbjct: 267 LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEA 326
Query: 390 YKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNV 449
++ +M + GC+ V Y LI G C +++ + +M + GV+ ++V
Sbjct: 327 MRVFVEMERYGCEADIVTYTALISGFC------KWGMIDKGYSVLDDMRKKGVMPSQVTY 380
Query: 450 SNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+FE+ +I +M +G PD+ Y+
Sbjct: 381 MQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYN 416
>AT5G65820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26339876-26341789 REVERSE
Length = 637
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 201/488 (41%), Gaps = 86/488 (17%)
Query: 67 MESISSKEFSFLRDSLLESKFD--------------TGKRSNDAVLISNAILNND----- 107
+E + SK FL S +S+FD +RSN L+ +ND
Sbjct: 15 VEFLLSKRQIFLHYSQFKSRFDLIHRSFHVSRALEDNFRRSNGIGLVCLEKSHNDRTKNS 74
Query: 108 --DGFGS---KTQKFLRQFREK-------LSES-------LVAEVLNLVKNP-ELGIKFF 147
D F S K+ + LR+F + L+ES L+ VLN + LG +FF
Sbjct: 75 KYDEFASDVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFF 134
Query: 148 IWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVL-GKLLNVLIR 206
+WA +Q Y H+ VY ++++++ + E++ E+ +++ +L VL++
Sbjct: 135 VWAAKQPRYCHSIEVYKSMVKILSKMRQFG---AVWGLIEEMRKENPQLIEPELFVVLVQ 191
Query: 207 KYCQNGLWNAALEELGRLKDFGYK---------------------ASRL----------- 234
++ + A+E L + FG++ A++L
Sbjct: 192 RFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVN 251
Query: 235 --TYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE 292
+ +L+ + R K+ A V +M+ G+ D AGK DA L+
Sbjct: 252 LRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLR 311
Query: 293 ---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKK 349
+ F P+ YT +I LC+ EEAM M C +VVTY L+ G +
Sbjct: 312 DMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWG 371
Query: 350 QLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYN 409
++ +C +L MI +G PS + ++ A+ + + +L++KM + P +YN
Sbjct: 372 KIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYN 431
Query: 410 ILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVI 469
++I C + ++ A ++EM E G+ L G +A +
Sbjct: 432 VVIRLAC------KLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHF 485
Query: 470 REMMSKGF 477
+EM+++G
Sbjct: 486 KEMVTRGL 493
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 3/186 (1%)
Query: 185 FLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFL 244
LR+++ E VLI+ C+ A++ ++ + +A +TY ALV F
Sbjct: 309 LLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFC 368
Query: 245 RAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE---EFVPDTI 301
+ K+D Y+V +M G T + K + + L L+EK E+ PD
Sbjct: 369 KWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIG 428
Query: 302 LYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLM 361
+Y +I C+ +EA+ N M N P V T+ I++ G + L M
Sbjct: 429 IYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEM 488
Query: 362 IMEGCF 367
+ G F
Sbjct: 489 VTRGLF 494
>AT1G63400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23507320-23509053 FORWARD
Length = 577
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 128/288 (44%), Gaps = 22/288 (7%)
Query: 214 WNAALEELGRLKDF------GYKASRL-------TYNALVIVFLRAEKLDTAYLVHREMS 260
+N L + ++K F G K RL TYN L+ F R ++ A + +M
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFE 317
LGY TL + C + DA+ L+++ + PDTI +T +I GL +
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
EA+ ++RM C PN+VTY +++ G ++ + +L+ M + I+++++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
+ C+ R A L +M G +P + Y+ LI +C E A S+M
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSD------ASRLLSDM 321
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+E + N V + GK +A + EM+ + PDI TYS
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 143/338 (42%), Gaps = 14/338 (4%)
Query: 152 RQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQN 211
+++G SH YN L I S + L ++ E L+ L+ YC
Sbjct: 112 QRLGISHNLYTYNIL---INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHG 168
Query: 212 GLWNAALEELGRLKDFGYKASRLTYNALVI-VFLRAEKLDTAYLVHREMSNLGYSMDSFT 270
+ A+ + ++ + GY+ +T+ L+ +FL + + LV R M G + T
Sbjct: 169 KRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDR-MVQRGCQPNLVT 227
Query: 271 LGCFAHSLCKAGKWRDALTLIEKEEFV---PDTILYTKMISGLCEASLFEEAMDFLNRMR 327
G + LCK G A L+ K E + ++Y+ +I LC+ ++A++ M
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 328 ANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYS 387
PNV+TY L+ ++ R+LS MI P+ FN+L+ A+ +
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 388 YAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKV 447
A KL +M+K P Y+ LI G C + D L+ A+ + M+ N V
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMH------DRLDEAKHMFELMISKDCFPNVV 401
Query: 448 NVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ C + ++ + REM +G + + TY+
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 11/290 (3%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ + +I C+ + AL +++ G + + +TY++L+ E+ A + +M
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLF 316
+ + T + K GK +A L + K PD Y+ +I+G C
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
+EA M + C PNVVTY L+ G + K++ + M G + + +L
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDL-PSMDVLELAETAYS 435
+H + ++RD A + K+MV G P + YN L+ G+C N L +M V E + +
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-- 499
Query: 436 EMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+E + + + +C GK E +++ + KG PD+ Y+
Sbjct: 500 -KMEPTIYTYNIMIEG----MCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 125/283 (44%), Gaps = 9/283 (3%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
LI C W+ A L + + + +T+NAL+ F++ KL A ++ EM
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAM 320
D FT + C + +A + E ++ P+ + Y +I+G C+A +E +
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
+ M + N VTY L+ G + + + + M+ +G P+ +N+L+
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEV 440
C++ A + + + + +P YNI+I G+C + D +L + + ++
Sbjct: 481 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE--DGWDLFCSLSLKGVKP 538
Query: 441 GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGT 483
V++ +S F C G E+A + R+M G +PD GT
Sbjct: 539 DVIIYNTMISGF----CRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 71/173 (41%), Gaps = 3/173 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI +C+ + +E + G + +TY L+ F +A D A +V ++M +
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
G + T LCK GK A+ + E + + P Y MI G+C+A E+
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 523
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPG 371
D + P+V+ Y ++ G RK + M +G P G
Sbjct: 524 GWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSG 576
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46100.1). | chr4:575843-577243 REVERSE
Length = 466
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 150/356 (42%), Gaps = 15/356 (4%)
Query: 126 SESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQF 185
S + V +++ +P L + F +A +Q + H+++ + L +I + +
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSH---LILILKLGRGRYFNLIDDV 106
Query: 186 LREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLR 245
L + + + G++ LI+ Y + L L ++ +F + N ++ V +
Sbjct: 107 LAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVS 166
Query: 246 AEK-LDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTI 301
L A+ + + G ++ + + C A L K + VPD
Sbjct: 167 HRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVD 226
Query: 302 LYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLM 361
Y +I G C AM+ L+ M +P+ ++Y LL RK QL ++L M
Sbjct: 227 SYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRM 286
Query: 362 IMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDL 421
++GC P +N+++ +CR A K+L M+ GC P V Y LIGG+C
Sbjct: 287 KLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLC----- 341
Query: 422 PSMDVLELAETAYSEMLEVGVVLNKVNVSN-FARCLCGVGKFEKAFNVIREMMSKG 476
+ + + EM+ G + +VSN + C GK E+A +V+ +M G
Sbjct: 342 -DQGMFDEGKKYLEEMISKGFSPH-FSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 8/251 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N+L++ +C N + A + G++ + +Y L+ F R +++ A + +M N
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN 253
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV---PDTILYTKMISGLCEASLFEE 318
G+ D + +SLC+ + R+A L+ + + PD + Y MI G C +
Sbjct: 254 KGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMD 313
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A L+ M +N C PN V+YR L+ G + K+ L MI +G P + N LV
Sbjct: 314 ARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVK 373
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSM-----DVLELAETA 433
+C A +++ ++K G + ++I IC ++ + D ++ T
Sbjct: 374 GFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITG 433
Query: 434 YSEMLEVGVVL 444
+ +++VG+ L
Sbjct: 434 DTRIVDVGIGL 444
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 9/186 (4%)
Query: 302 LYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTY-RILLCGCLRKKQLGRCKRILSL 360
++T +I EA L E+ + +M + P RIL + L + +
Sbjct: 121 IFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKS 180
Query: 361 MIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNED 420
+ G P+ +N L+ A+C + D S AY+L KM++ P Y ILI G C
Sbjct: 181 SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 421 L-PSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIP 479
+ +M++L+ +ML G V ++++ + LC + +A+ ++ M KG P
Sbjct: 241 VNGAMELLD-------DMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNP 293
Query: 480 DIGTYS 485
D+ Y+
Sbjct: 294 DLVHYN 299
>AT5G59900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24123983-24126706 REVERSE
Length = 907
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 11/288 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI C+ ++ A R+ G + + +TY+ L+ +F R KLDTA EM +
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
G + + + CK G A + + ++ P + YT ++ G C +
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ + M P++ T+ LL G R + ++ + M P+ +N ++
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
YC D S A++ LK+M + G P Y LI G+C V + + L
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV-------FVDGL 603
Query: 439 EVG-VVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
G LN++ + C GK E+A +V +EM+ +G D+ Y
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 131/319 (41%), Gaps = 40/319 (12%)
Query: 202 NVLIRKYCQ-NGLWNAALEELGRLKDFG---YKASRLTYNALVIVFLRAEKLDTAYLVHR 257
NVLI C+ +W A +G KD K +TY LV + ++ + +
Sbjct: 266 NVLIDGLCKKQKVWEA----VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 258 EMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE---EFVPDTILYTKMISGLCEAS 314
EM L +S + L K GK +AL L+++ P+ +Y +I LC+
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 315 LFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFN 374
F EA +RM PN VTY IL+ R+ +L L M+ G S +N
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441
Query: 375 SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC----------------GN 418
SL++ +C+ D S A + +M+ +P V Y L+GG C G
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Query: 419 EDLPSM-------------DVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKA 465
PS+ ++ A ++EM E V N+V + C G KA
Sbjct: 502 GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKA 561
Query: 466 FNVIREMMSKGFIPDIGTY 484
F ++EM KG +PD +Y
Sbjct: 562 FEFLKEMTEKGIVPDTYSY 580
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 126/281 (44%), Gaps = 11/281 (3%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
L+ +C+ G AL + G + Y L+ L+ + + + +EM + G
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDAL---TLIEKEEFVPDTILYTKMISGLCEASLFEEAM 320
D + K G +++A L+ E VP+ + YT +I+GLC+A EA
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRI-LSLMIMEGCFPSPGIFNSLVHA 379
++M+ S +PN VTY L L K ++ K + L I++G + +N L+
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFL-DILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRG 796
Query: 380 YCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLE 439
+CR A +L+ +M+ G P + Y +I +C D+ +EL ++ M E
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK--AIEL----WNSMTE 850
Query: 440 VGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
G+ ++V + C G+ KA + EM+ +G IP+
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 130/306 (42%), Gaps = 32/306 (10%)
Query: 212 GLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTL 271
GL A++ + ++ K +R+TYN ++ + + A+ +EM+ G D+++
Sbjct: 521 GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Query: 272 GCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRA 328
H LC G+ +A ++ K + I YT ++ G C EEA+ M
Sbjct: 581 RPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQ 640
Query: 329 NSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSY 388
++V Y +L+ G L+ K +L M G P I+ S++ A ++ D+
Sbjct: 641 RGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 389 AYKLLKKMVKCGCQPGYVVYNILIGGICG----NE------------DLPS-------MD 425
A+ + M+ GC P V Y +I G+C NE +P+ +D
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760
Query: 426 VLELAETAYSEMLEV------GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIP 479
+L E + +E+ G++ N + R C G+ E+A +I M+ G P
Sbjct: 761 ILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSP 820
Query: 480 DIGTYS 485
D TY+
Sbjct: 821 DCITYT 826
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 137/304 (45%), Gaps = 9/304 (2%)
Query: 185 FLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFL 244
FL E+ D ++ N LI +C+ G +AA + + + + + +TY +L+ +
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 245 RAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLI-EKEEF--VPDTI 301
K++ A ++ EM+ G + +T L +AG RDA+ L E E+ P+ +
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRV 543
Query: 302 LYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLM 361
Y MI G CE +A +FL M +P+ +YR L+ G Q K + +
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 362 IMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDL 421
C + + L+H +CR A + ++MV+ G V Y +LI G ++D
Sbjct: 604 HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD- 662
Query: 422 PSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDI 481
+L EM + G+ + V ++ G F++AF + M+++G +P+
Sbjct: 663 -----RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 482 GTYS 485
TY+
Sbjct: 718 VTYT 721
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 154/396 (38%), Gaps = 71/396 (17%)
Query: 124 KLSESLVAEVL-NLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTN--NNSNDR 180
+L V E+L + +P+LG++FF + G G+ H+ A + L+ + N ++
Sbjct: 67 RLKTVHVEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSL 126
Query: 181 IPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALV 240
+ LR +K D + NVL Y + L +S +++ L+
Sbjct: 127 LQTLLLRALKPSD------VFNVLFSCYEKCKL-----------------SSSSSFDLLI 163
Query: 241 IVFLRAEKLDTAYLVHREM-SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV-- 297
++R+ ++ LV + M + + + TL H L K + A+ L V
Sbjct: 164 QHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGI 223
Query: 298 -PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQL----- 351
PD +YT +I LCE A + + M A C N+V Y +L+ G +K+++
Sbjct: 224 RPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVG 283
Query: 352 ----------------------GRCK--------RILSLMIMEGCFPSPGIFNSLVHAYC 381
G CK ++ M+ PS +SLV
Sbjct: 284 IKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLR 343
Query: 382 RSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVG 441
+ A L+K++V G P VYN LI +C AE + M ++G
Sbjct: 344 KRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE------AELLFDRMGKIG 397
Query: 442 VVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGF 477
+ N V S C GK + A + + EM+ G
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
>AT1G63630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587298-23588220 FORWARD
Length = 257
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 129/292 (44%), Gaps = 43/292 (14%)
Query: 154 IGYSHTQA---VYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLL--NVLIRKY 208
+G SH +A + A+++ + N+ N + E+ +K + +L N +I +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHIN---AQNLFTEM--HEKGIFPNVLTYNCMIDSF 55
Query: 209 CQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDS 268
C +G W+ A + L + + +T++AL+ F++ K+ A +++EM
Sbjct: 56 CHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML-------- 107
Query: 269 FTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRA 328
+W P TI Y MI G C+ ++A L+ M +
Sbjct: 108 --------------RW----------SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMAS 143
Query: 329 NSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSY 388
C P+VVT+ L+ G + K++ I M G + + +L+H +C+ D
Sbjct: 144 KGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDA 203
Query: 389 AYKLLKKMVKCGCQPGYVVYNILIGGICGNEDL-PSMDVLELAETAYSEMLE 439
A LL +M+ CG P Y+ ++ ++ G+C ++L + +LE + + LE
Sbjct: 204 AQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDHHLE 255
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 11/211 (5%)
Query: 278 LCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPN 334
LCK G +A T + ++ P+ + Y MI C + + +A L M P+
Sbjct: 20 LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPD 79
Query: 335 VVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLK 394
+VT+ L+ ++++++ + I M+ FP+ +NS++ +C+ A ++L
Sbjct: 80 IVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 139
Query: 395 KMVKCGCQPGYVVYNILIGGICGNEDLPS-MDVLELAETAYSEMLEVGVVLNKVNVSNFA 453
M GC P V ++ LI G C + + + M++ + EM G+V N V +
Sbjct: 140 SMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI-------FCEMHRRGIVANTVTYTTLI 192
Query: 454 RCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
C VG + A +++ EM+S G PD T+
Sbjct: 193 HGFCQVGDLDAAQDLLNEMISCGVAPDYITF 223
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 9/218 (4%)
Query: 258 EMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEAS 314
EM G + T C S C +G+W DA L+ +++ PD + ++ +I+ +
Sbjct: 35 EMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKER 94
Query: 315 LFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFN 374
EA + M S P +TY ++ G ++ ++ KR+L M +GC P F+
Sbjct: 95 KVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFS 154
Query: 375 SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAY 434
+L++ YC+++ ++ +M + G V Y LI G C DL + A+
Sbjct: 155 TLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDA------AQDLL 208
Query: 435 SEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREM 472
+EM+ GV + + LC + KAF ++ ++
Sbjct: 209 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
>AT1G73400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27598412-27599812 FORWARD
Length = 466
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 156/381 (40%), Gaps = 20/381 (5%)
Query: 115 QKFLRQFREKLSESLVAEVLNLVKNPE-LGIKFFIWAGRQIGYSHTQAVYNALLEMIEST 173
+K L + L+ +V ++L ++ E +FF WAG Q YSH YN +++++ ST
Sbjct: 11 EKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSST 70
Query: 174 N-NNSNDRIPEQFLREIKDEDKE-VLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKA 231
N RI L +K +K VL +L ++RKYC+ L + +++ + K K
Sbjct: 71 KYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTH--VQKFAKRKRIRVKT 128
Query: 232 SRL--TYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALT 289
+N L+ + + + R M + D+ T C+ + A+
Sbjct: 129 QPEINAFNMLLDALCKCGLVKEGEALLRRMRH-RVKPDANTFNVLFFGWCRVRDPKKAMK 187
Query: 290 LIE---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANS---CIPNVVTYRILLC 343
L+E + P+ Y I C+A + +EA D + M P T+ +++
Sbjct: 188 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 247
Query: 344 GCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
+ + C ++ MI GC P + ++ C + AYK L +M G P
Sbjct: 248 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 307
Query: 404 GYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFE 463
V YN + +C N + + L+L Y M+E + + + +
Sbjct: 308 DIVTYNCFLRVLCENR--KTDEALKL----YGRMVESRCAPSVQTYNMLISMFFEMDDPD 361
Query: 464 KAFNVIREMMSKGFIPDIGTY 484
AFN EM + + D+ TY
Sbjct: 362 GAFNTWTEMDKRDCVQDVETY 382
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 141/358 (39%), Gaps = 35/358 (9%)
Query: 64 NSRMESISSKEFSFLRDSLLESKFDTGKRSNDAVLISNAILNNDDGFGSKTQKFLRQFRE 123
N ++ +SS ++ + ++ D KR+N V++ + +L + LR++
Sbjct: 61 NEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLL-----------EILRKY-- 107
Query: 124 KLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPE 183
E + V K + +K TQ NA ++++ + E
Sbjct: 108 --CERYLTHVQKFAKRKRIRVK-------------TQPEINAFNMLLDALCKCGLVKEGE 152
Query: 184 QFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF 243
LR ++ K NVL +C+ A++ L + + G+K TY A + F
Sbjct: 153 ALLRRMRHRVKPD-ANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTF 211
Query: 244 LRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAH---SLCKAGKWRDALTLIEK---EEFV 297
+A +D A + M G ++ + T FA +L K K + LI + +
Sbjct: 212 CQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCL 271
Query: 298 PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRI 357
PD Y +I G+C A +EA FL+ M P++VTY L ++ ++
Sbjct: 272 PDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKL 331
Query: 358 LSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
M+ C PS +N L+ + D A+ +M K C Y +I G+
Sbjct: 332 YGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGL 389
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 83/191 (43%), Gaps = 10/191 (5%)
Query: 298 PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRI 357
P+ + ++ LC+ L +E L RMR + P+ T+ +L G R + + ++
Sbjct: 130 PEINAFNMLLDALCKCGLVKEGEALLRRMR-HRVKPDANTFNVLFFGWCRVRDPKKAMKL 188
Query: 358 LSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQ---PGYVVYNILIGG 414
L MI G P + + + +C++ A L M+ G P + ++I
Sbjct: 189 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 248
Query: 415 ICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMS 474
+ N+ + + EL M+ G + + + +C K ++A+ + EM +
Sbjct: 249 LAKND--KAEECFELI----GRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSN 302
Query: 475 KGFIPDIGTYS 485
KG+ PDI TY+
Sbjct: 303 KGYPPDIVTYN 313
>AT3G04130.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 186/425 (43%), Gaps = 51/425 (12%)
Query: 99 ISNAILNNDDGFGSKTQKFLRQF------REKLSESLVAEVLNLVKN---PELGIKFFIW 149
I N I+ D S+ F R R LS+ LV ++L+ ++ LGI W
Sbjct: 53 IWNVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSALGI--LKW 110
Query: 150 AGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYC 209
A G+ H+ Y+ ++++ DR+ E F+ ++ DK V + ++R++
Sbjct: 111 AESCKGHKHSSDAYDMAVDILGKAKKW--DRMKE-FVERMRG-DKLVTLNTVAKIMRRFA 166
Query: 210 QNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSF 269
G W A+ RL +FG + + + N L+ + ++++ A +V ++ + + ++
Sbjct: 167 GAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-HITPNAH 225
Query: 270 TLGCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLCEASLFEEAMDFLNRM 326
T F H CKA + +AL I++ + F P I YT +I C+ F + + L+ M
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 327 RANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDY 386
AN PN +TY ++ +K+ R+ + M GC P +N L+H R+
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 387 SYAYKLLK-KMVKCGCQPGYVVYNILIGGIC-GNEDLPSMDVLELAETA----------- 433
A ++ + +M + G YN +I C +E+ ++++L+ E++
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 434 --------YSEMLEVGVVLNKVNVSN-----------FARCLCGVGKFEKAFNVIREMMS 474
+++EVG +L ++ + + LC E A+ + EM+S
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMIS 465
Query: 475 KGFIP 479
+ P
Sbjct: 466 QDITP 470
>AT3G04130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1084136-1085662 FORWARD
Length = 508
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 186/425 (43%), Gaps = 51/425 (12%)
Query: 99 ISNAILNNDDGFGSKTQKFLRQF------REKLSESLVAEVLNLVKN---PELGIKFFIW 149
I N I+ D S+ F R R LS+ LV ++L+ ++ LGI W
Sbjct: 53 IWNVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRSALGI--LKW 110
Query: 150 AGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYC 209
A G+ H+ Y+ ++++ DR+ E F+ ++ DK V + ++R++
Sbjct: 111 AESCKGHKHSSDAYDMAVDILGKAKKW--DRMKE-FVERMRG-DKLVTLNTVAKIMRRFA 166
Query: 210 QNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSF 269
G W A+ RL +FG + + + N L+ + ++++ A +V ++ + + ++
Sbjct: 167 GAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS-HITPNAH 225
Query: 270 TLGCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLCEASLFEEAMDFLNRM 326
T F H CKA + +AL I++ + F P I YT +I C+ F + + L+ M
Sbjct: 226 TFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEM 285
Query: 327 RANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDY 386
AN PN +TY ++ +K+ R+ + M GC P +N L+H R+
Sbjct: 286 EANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRL 345
Query: 387 SYAYKLLK-KMVKCGCQPGYVVYNILIGGIC-GNEDLPSMDVLELAETA----------- 433
A ++ + +M + G YN +I C +E+ ++++L+ E++
Sbjct: 346 EEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQ 405
Query: 434 --------YSEMLEVGVVLNKVNVSN-----------FARCLCGVGKFEKAFNVIREMMS 474
+++EVG +L ++ + + LC E A+ + EM+S
Sbjct: 406 PLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMIS 465
Query: 475 KGFIP 479
+ P
Sbjct: 466 QDITP 470
>AT5G14770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4772881-4775697 REVERSE
Length = 938
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 131/350 (37%), Gaps = 70/350 (20%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF-LRAEKLDTAYLVHRE 258
L + L R Y A L + FG +N+L+ F + D L++ +
Sbjct: 60 LFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSK 119
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
M G S D F L HS CK G+ A++L+ DT+ Y +ISGLCE L +E
Sbjct: 120 MIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADE 179
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSL------------------ 360
A FL+ M +P+ V+Y L+ G + R K ++
Sbjct: 180 AYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYN 239
Query: 361 ----------MIMEGCFPSPGIFNSLVHAYC----------------------------- 381
M+M G P F+S+++ C
Sbjct: 240 LHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTT 299
Query: 382 ------RSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYS 435
++ Y +A L +MV G VVY +L+ G+ DL AE +
Sbjct: 300 LVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLRE------AEKTFK 353
Query: 436 EMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+LE V N V + LC G A +I +M+ K IP++ TYS
Sbjct: 354 MLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYS 403
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 136/292 (46%), Gaps = 15/292 (5%)
Query: 201 LNVLIRKYCQNGLWN-AALEELGR-LKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
LN++ + +N A+EE R + G+ +T+++++ + K+ L+ RE
Sbjct: 225 LNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLRE 284
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEF--VP-DTILYTKMISGLCEASL 315
M + + T SL KA +R AL L + +P D ++YT ++ GL +A
Sbjct: 285 MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGD 344
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
EA + ++ +PNVVTY L+ G + L + I++ M+ + P+ ++S
Sbjct: 345 LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 404
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI--CGNEDLPSMDVLELAETA 433
+++ Y + A LL+KM P Y +I G+ G E++ +EL++
Sbjct: 405 MINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM----AIELSK-- 458
Query: 434 YSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
EM +GV N + L +G+ ++ ++++M+SKG D Y+
Sbjct: 459 --EMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYT 508
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 3/196 (1%)
Query: 224 LKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGK 283
L +G K SR YN L+ + A +V +M G+ D+ T H
Sbjct: 669 LLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSH 728
Query: 284 WRDALT---LIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRI 340
R AL+ ++ + P+ Y +I GL +A L +E +L+ M++ P+ TY
Sbjct: 729 VRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNA 788
Query: 341 LLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCG 400
L+ G + + I MI +G P +N L+ + A +LLK+M K G
Sbjct: 789 LISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRG 848
Query: 401 CQPGYVVYNILIGGIC 416
P Y +I G+C
Sbjct: 849 VSPNTSTYCTMISGLC 864
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 12/266 (4%)
Query: 224 LKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGK 283
+++ G ++YN L+ L+ K+ + ++ M G D T +S K G
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADW-AYKGMREKGIEPDIATFNIMMNSQRKQGD 588
Query: 284 WRDALTLIEKEE---FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRI 340
L L +K + P + ++ LCE EEA+ LN+M PN+ TYRI
Sbjct: 589 SEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 648
Query: 341 LLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCG 400
L + K+ + ++ G S ++N+L+ C+ A ++ M G
Sbjct: 649 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG 708
Query: 401 CQPGYVVYNILIGG-ICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGV 459
P V +N L+ G G+ + A + YS M+E G+ N + R L
Sbjct: 709 FIPDTVTFNSLMHGYFVGSH-------VRKALSTYSVMMEAGISPNVATYNTIIRGLSDA 761
Query: 460 GKFEKAFNVIREMMSKGFIPDIGTYS 485
G ++ + EM S+G PD TY+
Sbjct: 762 GLIKEVDKWLSEMKSRGMRPDDFTYN 787
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 121/291 (41%), Gaps = 17/291 (5%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
N+++ + G L+ ++K G K S ++ N +V + K++ A + +M
Sbjct: 576 FNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTI-----LYTKMISGLCEASL 315
+ + T F + K K DA+ E + I +Y +I+ LC+ +
Sbjct: 636 LMEIHPNLTTYRIFLDTSSKH-KRADAI-FKTHETLLSYGIKLSRQVYNTLIATLCKLGM 693
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
++A + M A IP+ VT+ L+ G + + S+M+ G P+ +N+
Sbjct: 694 TKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNT 753
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC--GNEDLPSMDVLELAETA 433
++ + K L +M G +P YN LI G GN ++ + T
Sbjct: 754 IIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGN--------MKGSMTI 805
Query: 434 YSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
Y EM+ G+V + VGK +A +++EM +G P+ TY
Sbjct: 806 YCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTY 856
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 98/246 (39%), Gaps = 24/246 (9%)
Query: 199 KLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
++ N LI C+ G+ A +G ++ G+ +T+N+L+ + + A +
Sbjct: 679 QVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSV 738
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAG------KWRDALTLIEKEEFVPDTILYTKMISGLCE 312
M G S + T L AG KW L+ ++ PD Y +ISG +
Sbjct: 739 MMEAGISPNVATYNTIIRGLSDAGLIKEVDKW---LSEMKSRGMRPDDFTYNALISGQAK 795
Query: 313 ASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGI 372
+ +M M A+ +P TY +L+ ++ + + +L M G P+
Sbjct: 796 IGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTST 855
Query: 373 FNSLVHAYCR---SRDYSY---------AYKLLKKMVKCGCQPGYVVYNILIGGICGNED 420
+ +++ C+ D + A LLK+MV+ + GY+ N I I
Sbjct: 856 YCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVE---EKGYIPCNQTIYWISAAFS 912
Query: 421 LPSMDV 426
P M V
Sbjct: 913 KPGMKV 918
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 111/281 (39%), Gaps = 66/281 (23%)
Query: 270 TLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRM 326
T LCKAG A +T + ++ +P+ + Y+ MI+G + + EEA+ L +M
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Query: 327 RANSCIPNVVTYRILLCGCLRK--------------------------------KQLGRC 354
+ +PN TY ++ G + K++GR
Sbjct: 426 EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRI 485
Query: 355 KRILSL---MIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
K + L M+ +G + SL+ + + D A ++M + G V YN+L
Sbjct: 486 KEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVL 545
Query: 412 IGGIC-----------------GNE-DLPSMDVLELAETA----------YSEMLEVGVV 443
I G+ G E D+ + +++ ++ + +M G+
Sbjct: 546 ISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIK 605
Query: 444 LNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+ ++ + LC GK E+A +++ +MM P++ TY
Sbjct: 606 PSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTY 646
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 134/308 (43%), Gaps = 18/308 (5%)
Query: 185 FLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFL 244
LR+++D++ G +I + G A+E ++ G + + +ALV
Sbjct: 421 LLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLK 480
Query: 245 RAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE--KEEFVP-DTI 301
R ++ + ++M + G ++D K G AL E +E +P D +
Sbjct: 481 RIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVV 540
Query: 302 LYTKMISGLCEASLFEEAMDFLNR-MRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSL 360
Y +ISG+ + + D+ + MR P++ T+ I++ ++KQ G + IL L
Sbjct: 541 SYNVLISGMLKFG--KVGADWAYKGMREKGIEPDIATFNIMMNS--QRKQ-GDSEGILKL 595
Query: 361 M-IMEGCFPSPGIF--NSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICG 417
M+ C P + N +V C + A +L +M+ P Y I +
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Query: 418 NEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGF 477
++ + + + ET +L G+ L++ + LC +G +KA V+ +M ++GF
Sbjct: 656 HKRADA--IFKTHET----LLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGF 709
Query: 478 IPDIGTYS 485
IPD T++
Sbjct: 710 IPDTVTFN 717
>AT5G38730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15510901-15512691 FORWARD
Length = 596
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 156/399 (39%), Gaps = 60/399 (15%)
Query: 140 PELGIKFFIWAGRQIGYSHT-QAVYNALLEMIE----STNNNSNDRIPEQ-------FLR 187
P L FFIW H+ Q+ + +L + + T + D++ ++ LR
Sbjct: 60 PSLSWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLR 119
Query: 188 EIK---DEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFL 244
+ ED E + + + L+ Y + G+ N ++ +++ G K L+ +
Sbjct: 120 SLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLV 179
Query: 245 RAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAG---KWRDALTLIEKEEFVPDTI 301
+ DT + + ++M LG + H+ K+G K L+ +E++ PD
Sbjct: 180 KQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIF 239
Query: 302 LYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLM 361
Y +IS C+ S+ EA+ +RM + PN+VTY + G R+ ++ R+
Sbjct: 240 TYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFR-E 298
Query: 362 IMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVY------------- 408
I + + + +L+ YCR D A +L + M G PG V Y
Sbjct: 299 IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRI 358
Query: 409 ----------------------NILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNK 446
N LI C ED+ S A +M+E G+ L+
Sbjct: 359 REANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVS------AVKVKKKMIESGLKLDM 412
Query: 447 VNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ C V + E A + M+ KGF P TYS
Sbjct: 413 YSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYS 451
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 120/288 (41%), Gaps = 14/288 (4%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
NVL+ ++G A + L +++ G TYN L+ V+ + A V M
Sbjct: 207 NVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMER 266
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE--KEEFVPDTILYTKMISGLCEASLFEEA 319
G + + T F H + G+ R+A L K++ + + YT +I G C + +EA
Sbjct: 267 SGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEA 326
Query: 320 MDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHA 379
+ M + P VVTY +L ++ R+L+ M + P N+L++A
Sbjct: 327 LRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINA 386
Query: 380 YCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE--- 436
YC+ D A K+ KKM++ G + Y LI G C VLEL E A E
Sbjct: 387 YCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFC--------KVLEL-ENAKEELFS 437
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
M+E G S K ++ ++ E +G D+ Y
Sbjct: 438 MIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALY 485
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 143/372 (38%), Gaps = 52/372 (13%)
Query: 153 QIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLL--NVLIRKYCQ 210
++G VYN L + + + + + E+ L E+ E+K V + N LI YC+
Sbjct: 196 KLGVVANIHVYNVL---VHACSKSGDPEKAEKLLSEM--EEKGVFPDIFTYNTLISVYCK 250
Query: 211 NGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFT 270
+ AL R++ G + +TYN+ + F R ++ A + RE+ + + + T
Sbjct: 251 KSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVT 309
Query: 271 LGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMR 327
C+ +AL L +E F P + Y ++ LCE EA L M
Sbjct: 310 YTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMS 369
Query: 328 ANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYS 387
P+ +T L+ + + + ++ MI G + +L+H +C+ +
Sbjct: 370 GKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELE 429
Query: 388 YAYKLLKKMVKCGCQPGYVVYNIL-----------------------------------I 412
A + L M++ G PGY Y+ L I
Sbjct: 430 NAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLI 489
Query: 413 GGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREM 472
IC ++ ++ A+ + M + G+V + V + A GK +A + M
Sbjct: 490 RRIC------KLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Query: 473 MSKGFIPDIGTY 484
++ + ++ Y
Sbjct: 544 YNRRLMVNLKLY 555
>AT2G17670.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675811 FORWARD
Length = 463
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 117/288 (40%), Gaps = 10/288 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM-S 260
++ +R C+ G + A + + L + TYN L+ + + L Y EM
Sbjct: 163 DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRD 222
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFE 317
+ D + ++C + R+A+ L+ K F PD LY ++ G C S
Sbjct: 223 DFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS 282
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
EA+ +M+ P+ +TY L+ G + ++ + L M+ G P + SL+
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
+ CR + A LL++M GC P YN L+ G+C +++ Y M
Sbjct: 343 NGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLC------KARLMDKGMELYEMM 396
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
GV L + R L GK +A+ V + + D YS
Sbjct: 397 KSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYS 444
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
L N +++ +C + A+ ++K+ G + ++TYN L+ +A +++ A + + M
Sbjct: 267 LYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM 326
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEF---VPDTILYTKMISGLCEASLF 316
+ GY D+ T + +C+ G+ AL+L+E+ E P+ Y ++ GLC+A L
Sbjct: 327 VDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLM 386
Query: 317 EEAMDFLNRMRAN 329
++ M+ M+++
Sbjct: 387 DKGMELYEMMKSS 399
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 19/205 (9%)
Query: 288 LTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLR 347
L L+ PD + + LCE +EA D + + P+ TY LL
Sbjct: 147 LNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLL----- 201
Query: 348 KKQLGRCKRILSLM----IMEGCF---PSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCG 400
K L +CK + + M F P F L+ C S++ A L+ K+ G
Sbjct: 202 -KHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG 260
Query: 401 CQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVG 460
+P +YN ++ G C ++ A Y +M E GV +++ + L G
Sbjct: 261 FKPDCFLYNTIMKGFC------TLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAG 314
Query: 461 KFEKAFNVIREMMSKGFIPDIGTYS 485
+ E+A ++ M+ G+ PD TY+
Sbjct: 315 RVEEARMYLKTMVDAGYEPDTATYT 339
>AT5G18475.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6129255-6130775 REVERSE
Length = 506
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 165/389 (42%), Gaps = 47/389 (12%)
Query: 138 KNPELGIKFFIWAGRQIGYSHTQAVYNALLE-MIESTNNNSNDRIPEQFLRE-------- 188
++P+ + F A +Q G++H A Y+ LL+ ++ + D I Q E
Sbjct: 67 RDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESL 126
Query: 189 ------------IKDEDKEVLGKLLNVLIR--------KYCQNGLWNAALEELGRL---- 224
+ D+ E+ L+ V+ R C N L ++ L R
Sbjct: 127 FLNLMRHFSRSDLHDKVMEMFN-LIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLY 185
Query: 225 --KDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSM-DSFTLGCFAHSLCKA 281
+ G + + +N LV + ++ A+LV EM G S +S T L
Sbjct: 186 AKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAH 245
Query: 282 GKWRDALTLIE----KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVT 337
+ ++A+ L E KE PD + + MI+G C A E A L+ M+ N C PNV
Sbjct: 246 SRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYN 305
Query: 338 YRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMV 397
Y L+ G + ++ K+ + G + +L++ +CR+ + A KLL +M
Sbjct: 306 YSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMK 365
Query: 398 KCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLC 457
C+ + YN+++ G+ + + S + L++ + SE GV LNK + LC
Sbjct: 366 ASRCRADTLTYNVILRGL--SSEGRSEEALQMLDQWGSE----GVHLNKGSYRIILNALC 419
Query: 458 GVGKFEKAFNVIREMMSKGFIPDIGTYSK 486
G+ EKA + M +G P T+++
Sbjct: 420 CNGELEKAVKFLSVMSERGIWPHHATWNE 448
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 5/238 (2%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
NV+I +C+ G A + L +K G + Y+AL+ F + K+ A E+
Sbjct: 271 FNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVK 330
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFE 317
G +D+ + C+ G+ +A+ L+ + DT+ Y ++ GL E
Sbjct: 331 KTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSE 390
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
EA+ L++ + N +YRI+L +L + + LS+M G +P +N LV
Sbjct: 391 EALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYS 435
C S ++L ++ G PG + ++ IC L + V EL ++ S
Sbjct: 451 VRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKL--VHVFELLDSLVS 506
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 132/323 (40%), Gaps = 62/323 (19%)
Query: 200 LLNVLIRKYCQNGLWNAA---LEELGR-------------LKDFGYKASR---------- 233
+ N+L++ +C+NG N A +EE+ R L D + SR
Sbjct: 198 IFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFED 257
Query: 234 -----------LTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAG 282
+T+N ++ F RA +++ A + M G + + + + CK G
Sbjct: 258 MISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVG 317
Query: 283 KWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYR 339
K ++A ++K DT+ YT +++ C +EAM L M+A+ C + +TY
Sbjct: 318 KIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYN 377
Query: 340 ILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKC 399
++L G + + ++L EG + G + +++A C + + A K L M +
Sbjct: 378 VILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSER 437
Query: 400 GCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM--------LEVGVVLNKVNVSN 451
G P + +N L V+ L E+ Y+E+ L +G++ +
Sbjct: 438 GIWPHHATWNEL--------------VVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGA 483
Query: 452 FARCLCGVGKFEKAFNVIREMMS 474
+C K F ++ ++S
Sbjct: 484 VVESICKERKLVHVFELLDSLVS 506
>AT5G43820.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G15010.1); Has
14980 Blast hits to 5082 proteins in 161 species: Archae
- 0; Bacteria - 2; Metazoa - 156; Fungi - 253; Plants -
14070; Viruses - 0; Other Eukaryotes - 499 (source: NCBI
BLink). | chr5:17618948-17620588 FORWARD
Length = 546
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 165/416 (39%), Gaps = 53/416 (12%)
Query: 112 SKTQKFLRQFREKLSESLVAEVLNLVK-NPELGIKFFIWAGRQIGYSHTQAVYNALLEMI 170
S QK L LS +VA+VLN + E + FF WA R+ G + Y+ +L +
Sbjct: 102 SAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRAL 161
Query: 171 ------------------ESTNNN-------SNDRIPEQFLREIKD--EDKEVLG----- 198
E N + + + ++R + E+ E G
Sbjct: 162 GRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCST 221
Query: 199 KLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
+ N L+R C+ +AA + + K +YN ++ + + +++ V +E
Sbjct: 222 ESFNALLRCLCERSHVSAA-KSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKE 280
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASL 315
M G+ D + L + G+ D++ + I+ + VPD +Y MI A
Sbjct: 281 MVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARD 340
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
F+E+M + RM C PN+ TY L+ G ++ +++ I M+ G P+ G+ S
Sbjct: 341 FDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTS 400
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIG-----GICGNEDLPSMDVLELA 430
+ C A + +K K GC+ Y +L+ G CG +
Sbjct: 401 FLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCG-----------ML 449
Query: 431 ETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYSK 486
+ EM E G + LC +G E A V+ E M KGF P+ YS+
Sbjct: 450 LNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSR 505
>AT1G77340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29068343-29069828 REVERSE
Length = 441
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 150/369 (40%), Gaps = 35/369 (9%)
Query: 126 SESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQF 185
+ S V+ + +L +P+ + F W R + H Y +L+ ++ S IP +
Sbjct: 26 TPSHVSSLFSLNLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCS------QEIPYEV 79
Query: 186 LREIKDEDKEVLGKLLNVLIRKYC---QNGLWNAALEELGRLKD---FGYKASRLTYNAL 239
+ + +L+ K C ++ L+ R D YK + YN L
Sbjct: 80 PK-------------ITILMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNL 126
Query: 240 VIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEF 296
+ R ++ ++ EM S D +T + CK G +A +T + +
Sbjct: 127 LSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGC 186
Query: 297 VPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKR 356
PD YT I+G C + A M N C N V+Y L+ G K++
Sbjct: 187 DPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALS 246
Query: 357 ILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC 416
+L M + C P+ + L+ A C S S A L K+M + G +P +Y +LI C
Sbjct: 247 LLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFC 306
Query: 417 GNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKG 476
S D L+ A MLE G++ N + + + C KA ++ +M+ +
Sbjct: 307 ------SGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQN 359
Query: 477 FIPDIGTYS 485
+PD+ TY+
Sbjct: 360 LVPDLITYN 368
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 125/318 (39%), Gaps = 46/318 (14%)
Query: 153 QIGYSHTQAVYNALLEMIESTN-NNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQN 211
+I Y T YN LL + R+ + L ++ D N L+ YC+
Sbjct: 113 EIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTF----NTLVNGYCKL 168
Query: 212 GLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTL 271
G A + + L G TY + + R +++D A+ V +EM+ G
Sbjct: 169 GYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNG-------- 220
Query: 272 GCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSC 331
H + + YT++I GL EA +EA+ L +M+ ++C
Sbjct: 221 ---CHR---------------------NEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNC 256
Query: 332 IPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYK 391
PNV TY +L+ Q + M G P ++ L+ ++C A
Sbjct: 257 CPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASG 316
Query: 392 LLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSN 451
LL+ M++ G P + YN LI G C +M +L S+MLE +V + + +
Sbjct: 317 LLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLL-------SKMLEQNLVPDLITYNT 369
Query: 452 F--ARCLCGVGKFEKAFN 467
+C G+ EK N
Sbjct: 370 LIAGQCSSGISLSEKICN 387
>AT5G61400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24681550-24683514 FORWARD
Length = 654
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 126/289 (43%), Gaps = 9/289 (3%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ + I C++ A + +K G + TY+A++ + + + AY +++E+
Sbjct: 236 IYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEI 295
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLF 316
+ G CKA + A +L + K P+ +Y +I G C++
Sbjct: 296 LVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNM 355
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
EA+ L+ M + + P+V TY IL+ G + Q+ R+ M E FPS +NSL
Sbjct: 356 LEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSL 415
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
+H YC+ + A L +M G +P + ++ LI G C D+ + A Y E
Sbjct: 416 IHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKA------AMGLYFE 469
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
M G+V + V + ++A + +M+ G P+ T++
Sbjct: 470 MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFA 518
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 115/288 (39%), Gaps = 9/288 (3%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ L+ +C+ A + FG + YN L+ ++ + A + EM
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLF 316
+L S D FT + LC + +A L +K E P + Y +I G C+
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM 425
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
E+A+D + M A+ PN++T+ L+ G + + + M ++G P + +L
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
+ A+ + + A +L M++ G P + L+ G L +A Y E
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR------LSVAIDFYQE 539
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+ N V + LC G +A +M S G PDI +Y
Sbjct: 540 NNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSY 587
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 150/338 (44%), Gaps = 23/338 (6%)
Query: 156 YSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKD-EDKEVLGKLLNVLIRKYCQNGLW 214
Y+ + + +L+E ++ + SN + + ++D + + + ++LI ++ + GL+
Sbjct: 91 YTLARCLIKSLIERLKRHSEPSN--MSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLF 148
Query: 215 NAALEELGRLK-DFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDS---FT 270
AL +K KA N LV R + D+ ++ ++ M + G D F
Sbjct: 149 EEALWVSREMKCSPDSKACLSILNGLV----RRRRFDSVWVDYQLMISRGLVPDVHIYFV 204
Query: 271 L--GCFAHSL-CKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMR 327
L CF L K K D +T + + P+ +YT I LC + EEA M+
Sbjct: 205 LFQCCFKQGLYSKKEKLLDEMTSLGIK---PNVYIYTIYILDLCRDNKMEEAEKMFELMK 261
Query: 328 ANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYS 387
+ +PN+ TY ++ G + + + + +++ P+ +F +LV +C++R+
Sbjct: 262 KHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELV 321
Query: 388 YAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKV 447
A L MVK G P VYN LI G C S ++LE A SEM + + +
Sbjct: 322 TARSLFVHMVKFGVDPNLYVYNCLIHGHC-----KSGNMLE-AVGLLSEMESLNLSPDVF 375
Query: 448 NVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ LC + +A + ++M ++ P TY+
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYN 413
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 79/189 (41%), Gaps = 4/189 (2%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
+ LI YC AA+ + G +TY AL+ + + A ++ +M
Sbjct: 447 FSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML 506
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFE 317
G + T C K G+ A+ + ++ + + +T +I GLC+
Sbjct: 507 EAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYIL 566
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
A F + MR+ P++ +Y +L G L++K++ + MI G P+ + N L+
Sbjct: 567 RASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNL-LVNQLL 625
Query: 378 HAYCRSRDY 386
+ ++ Y
Sbjct: 626 ARFYQANGY 634
>AT5G16420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:5368034-5369641 FORWARD
Length = 535
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 162/366 (44%), Gaps = 43/366 (11%)
Query: 118 LRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGR-QIGYSHTQAVYNALLEMIESTNNN 176
++ + ++L + ++ +N +L ++ F++AG+ G++H Y+++L + +
Sbjct: 40 IKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSIL--FKLSRAR 97
Query: 177 SNDRIPEQFLREIKDEDKEV-LGKLLNV-LIRKYCQNGLWNAALEELGRLKDFGYKASRL 234
+ D + E + ++++ + G+ L + L+R Y G + +++ R+ DFG K S
Sbjct: 98 AFDPV-ESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVR 156
Query: 235 TYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE 294
+ N L+ V ++ ++ D LVH N S +SF +
Sbjct: 157 SLNTLLNVLIQNQRFD---LVHAMFKN---SKESFGI----------------------- 187
Query: 295 EFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRC 354
P+ ++ LC+ + E A L+ + + +PN+VTY +L G + + +
Sbjct: 188 --TPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 355 KRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG 414
KR+L M+ G +P + L+ YC+ +S A ++ M K +P V Y ++I
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 415 ICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMS 474
+C + A + EMLE + + LC K ++A + R+M+
Sbjct: 306 LCKEKKSGE------ARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLK 359
Query: 475 KGFIPD 480
+PD
Sbjct: 360 NNCMPD 365
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 12/266 (4%)
Query: 208 YCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMD 267
Y G +A L + D G+ TY L+ + + + A V +M +
Sbjct: 236 YVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPN 295
Query: 268 SFTLGCFAHSLCK---AGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLN 324
T G +LCK +G+ R+ + + F+PD+ L K+I LCE +EA
Sbjct: 296 EVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWR 355
Query: 325 RMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSR 384
+M N+C+P+ L+ ++ ++ +++ +G PS +N+L+ C
Sbjct: 356 KMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFD-EFEKGSIPSLLTYNTLIAGMCEKG 414
Query: 385 DYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLP-SMDVLELAETAYSEMLEVGVV 443
+ + A +L M + C+P YN+LI G+ N ++ + VLE EMLE+G
Sbjct: 415 ELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE-------EMLEIGCF 467
Query: 444 LNKVNVSNFARCLCGVGKFEKAFNVI 469
NK L +GK E A ++
Sbjct: 468 PNKTTFLILFEGLQKLGKEEDAMKIV 493
>AT5G55840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22598398-22602499 FORWARD
Length = 1274
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 121/286 (42%), Gaps = 9/286 (3%)
Query: 203 VLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNL 262
VL+ C+N ++ A R+K G R+TY ++ + LD A ++ EMS
Sbjct: 373 VLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD 432
Query: 263 GYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEA 319
G D T + CK G+++ A + I + P+ I+Y+ +I C +EA
Sbjct: 433 GIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEA 492
Query: 320 MDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHA 379
+ M + T+ +L+ + ++ + + M +G P+ F+ L++
Sbjct: 493 IRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 552
Query: 380 YCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLE 439
Y S + A+ + +M K G P + Y L+ G+C L AE +
Sbjct: 553 YGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE------AEKFLKSLHA 606
Query: 440 VGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
V ++ V + +C G KA ++ EM+ + +PD TY+
Sbjct: 607 VPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 652
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 115/254 (45%), Gaps = 9/254 (3%)
Query: 235 TYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE-- 292
T+N L+ V + + + ++M GY+ T H CK G+++ A+ L++
Sbjct: 195 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254
Query: 293 KEEFV-PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQL 351
K + V D Y +I LC ++ + L MR PN VTY L+ G + ++
Sbjct: 255 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314
Query: 352 GRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
++L+ M+ G P+ FN+L+ + ++ A K+ M G P V Y +L
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 374
Query: 412 IGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIRE 471
+ G+C N + +LA Y M GV + ++ + LC G ++A ++ E
Sbjct: 375 LDGLCKNAE------FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428
Query: 472 MMSKGFIPDIGTYS 485
M G PDI TYS
Sbjct: 429 MSKDGIDPDIVTYS 442
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 140/337 (41%), Gaps = 15/337 (4%)
Query: 153 QIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNG 212
++G+ T Y +LL+ + + R E+FL+ + V + N L+ C++G
Sbjct: 571 KVGHHPTFFTYGSLLKGL---CKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 213 LWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSM-DSFTL 271
A+ G + TY +L+ R K A L +E G + +
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 687
Query: 272 GCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLCEASLFEEAMDFLNRMRA 328
CF + KAG+W+ + E+ + PD + MI G E+ D L M
Sbjct: 688 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747
Query: 329 NSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSY 388
+ PN+ TY ILL G ++K + + +I+ G P +SLV C S
Sbjct: 748 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 807
Query: 389 AYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLP-SMDVLELAETAYSEMLEVGVVLNKV 447
K+LK + G + +N+LI C N ++ + D++++ M +G+ L+K
Sbjct: 808 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKV-------MTSLGISLDKD 860
Query: 448 NVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
L +F+++ V+ EM +G P+ Y
Sbjct: 861 TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 132/321 (41%), Gaps = 44/321 (13%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHR---- 257
N ++ YC+ G + AA+E L +K G A TYN L+ R+ ++ YL+ R
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 291
Query: 258 -------------------------------EMSNLGYSMDSFTLGCFAHSLCKAGKWRD 286
EM + G S + T G +++
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351
Query: 287 ALT---LIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLC 343
AL ++E + P + Y ++ GLC+ + F+ A F RM+ N +TY ++
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411
Query: 344 GCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
G + L +L+ M +G P +++L++ +C+ + A +++ ++ + G P
Sbjct: 412 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 471
Query: 404 GYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFE 463
++Y+ LI C M L+ A Y M+ G + + LC GK
Sbjct: 472 NGIIYSTLIYNCC------RMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 525
Query: 464 KAFNVIREMMSKGFIPDIGTY 484
+A +R M S G +P+ ++
Sbjct: 526 EAEEFMRCMTSDGILPNTVSF 546
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 110/253 (43%), Gaps = 9/253 (3%)
Query: 235 TYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE-- 292
Y+ L+ V+LR + + + R M G++ +T S+ K+G+ + ++
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 293 -KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQL 351
K + PD + +I+ LC FE++ + +M + P +VTY +L +K +
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 352 GRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
+L M +G +N L+H CRS + Y LL+ M K P V YN L
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 304
Query: 412 IGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIRE 471
I G NE VL +A +EML G+ N V + G F++A +
Sbjct: 305 INGF-SNEG----KVL-IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 472 MMSKGFIPDIGTY 484
M +KG P +Y
Sbjct: 359 MEAKGLTPSEVSY 371
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 30/292 (10%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
L+ C++ + L+ L G + R T+N L+ +++ A+ + + M++LG
Sbjct: 795 LVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLG 854
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEEAM 320
S+D T L + +++++ L + K+ P++ Y +I+GLC + A
Sbjct: 855 ISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAF 914
Query: 321 DFLNRMRANS-CIPNVVTYRILLCGCLRKKQLGRCKR------ILSLMIMEGCFPSPGIF 373
M A+ C PNV ++ + L +C + +L M+ P+ F
Sbjct: 915 VVKEEMIAHKICPPNVAESAMV-------RALAKCGKADEATLLLRFMLKMKLVPTIASF 967
Query: 374 NSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETA 433
+L+H C++ + A +L M CG + V YN+LI G+C D+ LA
Sbjct: 968 TTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA------LAFEL 1021
Query: 434 YSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFN----VIREMMSKGFIPDI 481
Y EM G + N R G+ E AF+ ++++++++GFI +
Sbjct: 1022 YEEMKGDGFLANATTYKALIR---GLLARETAFSGADIILKDLLARGFITSM 1070
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 135/345 (39%), Gaps = 49/345 (14%)
Query: 180 RIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNAL 239
RI E + E D NVL+ C+ G A E + + G + ++++ L
Sbjct: 494 RIYEAMILEGHTRDHFTF----NVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 549
Query: 240 VIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVP- 298
+ + + + A+ V EM+ +G+ FT G LCK G R+A ++ VP
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609
Query: 299 --DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRK-------- 348
DT++Y +++ +C++ +A+ M S +P+ TY L+ G RK
Sbjct: 610 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL 669
Query: 349 --KQLGRCKRILSLMIMEGCFPS---------PGIF-----------------NSLVHAY 380
K+ +L +M CF GI+ N+++ Y
Sbjct: 670 FAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY 729
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEV 440
R LL +M P YNIL+ G +D+ + +L Y ++
Sbjct: 730 SRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLL------YRSIILN 783
Query: 441 GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
G++ +K+ + +C E +++ + +G D T++
Sbjct: 784 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 828
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 113/279 (40%), Gaps = 9/279 (3%)
Query: 210 QNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSF 269
+ G W A + ++ + G+ +T NA++ + R K++ + EM N +
Sbjct: 696 KAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLT 755
Query: 270 TLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRM 326
T H K + L I +PD + ++ G+CE+++ E + L
Sbjct: 756 TYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAF 815
Query: 327 RANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDY 386
+ T+ +L+ C ++ ++ +M G +++V R+ +
Sbjct: 816 ICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRF 875
Query: 387 SYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNK 446
+ +L +M K G P Y LI G+C D+ + V++ EM+ +
Sbjct: 876 QESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVK------EEMIAHKICPPN 929
Query: 447 VNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
V S R L GK ++A ++R M+ +P I +++
Sbjct: 930 VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFT 968
>AT5G24830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8531226-8533266 FORWARD
Length = 593
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 204/498 (40%), Gaps = 54/498 (10%)
Query: 27 PSNFQSHNLLCVISRFMSSSSD-----DLEGLFDPEDPM---SLDN--SRMESI-SSKEF 75
PS +H+ LC ++ S D D E +F+ D + SLD S ES+ +K F
Sbjct: 57 PSISGNHSHLCT-EKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQTKSF 115
Query: 76 ----------SFLRDSLLESKFDTGKRSNDAVLIS---------NAILNN--DDGFGSKT 114
S +RD L+ K D ++ S N +LN G+ K
Sbjct: 116 DYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKA 175
Query: 115 QKFLRQFREK------LSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLE 168
+R+ RE +S + + + L V N + + F + G + N ++
Sbjct: 176 DGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFN-TMNKYGIRPNRVTCNIIVH 234
Query: 169 MI--ESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYC-QNGLWNAALEELGRLK 225
+ + N+N ++ E+ L + L ++ ++ C +NG ALE +
Sbjct: 235 ALCQKGVIGNNNKKLLEEILDS--SQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMS 292
Query: 226 DFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWR 285
A + YN ++ + + AY +M G + D FT +LCK GK+
Sbjct: 293 QKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFD 352
Query: 286 DALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILL 342
+A L ++ PD I Y +I GLC A +FL M +S +P V+ + +++
Sbjct: 353 EACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVI 412
Query: 343 CGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQ 402
G R +L+LM+ G P+ N+L+H Y + A+ + +M
Sbjct: 413 DGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIH 472
Query: 403 PGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKF 462
P YN+L+G C ++ L LA Y EML G + + + R LC G+
Sbjct: 473 PDTTTYNLLLGAAC------TLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRL 526
Query: 463 EKAFNVIREMMSKGFIPD 480
+KA +++ + + G D
Sbjct: 527 KKAESLLSRIQATGITID 544
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 116/282 (41%), Gaps = 9/282 (3%)
Query: 169 MIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFG 228
+++S N N + +E+ ++ + NV+IR C +G AA + + G
Sbjct: 271 LMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRG 330
Query: 229 YKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA- 287
TYN L+ + K D A +H M N G + D + LC G A
Sbjct: 331 VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRAN 390
Query: 288 --LTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGC 345
L + K +P+ +L+ +I G A+ LN M + PNV T L+ G
Sbjct: 391 EFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGY 450
Query: 346 LRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGY 405
++ +L + + M P +N L+ A C A++L +M++ GCQP
Sbjct: 451 VKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDI 510
Query: 406 VVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKV 447
+ Y L+ G+C L AE+ S + G+ ++ V
Sbjct: 511 ITYTELVRGLCWKGRLKK------AESLLSRIQATGITIDHV 546
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 128/342 (37%), Gaps = 16/342 (4%)
Query: 152 RQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQN 211
R++G S YN L++ + S NN + + V N+++ CQ
Sbjct: 183 REMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVT---CNIIVHALCQK 239
Query: 212 GLWN----AALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMD 267
G+ LEE+ + L+ + + A V +EMS D
Sbjct: 240 GVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPAD 299
Query: 268 SFTLGCFAHSLCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFEEAMDFLN 324
S LC +G A + K PD Y +IS LC+ F+EA D
Sbjct: 300 SVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHG 359
Query: 325 RMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSR 384
M+ P+ ++Y++++ G + R L M+ P ++N ++ Y R
Sbjct: 360 TMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYG 419
Query: 385 DYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVL 444
D S A +L M+ G +P N LI G L A +EM +
Sbjct: 420 DTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLID------AWWVKNEMRSTKIHP 473
Query: 445 NKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYSK 486
+ + C +G AF + EM+ +G PDI TY++
Sbjct: 474 DTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTE 515
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 5/211 (2%)
Query: 278 LCKAGKWRDALTLIEKEEF---VPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPN 334
LC GK AL L +K + +P I + +++GLC+A E+A + MR PN
Sbjct: 131 LCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPN 190
Query: 335 VVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLK 394
V+Y L+ G + + + + M G P+ N +VHA C+ K L
Sbjct: 191 CVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLL 250
Query: 395 KMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFAR 454
+ + Q + +I+I I + + +V++ E + EM + V + V + R
Sbjct: 251 EEILDSSQANAPL-DIVICTILMDSCFKNGNVVQALE-VWKEMSQKNVPADSVVYNVIIR 308
Query: 455 CLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
LC G A+ + +M+ +G PD+ TY+
Sbjct: 309 GLCSSGNMVAAYGFMCDMVKRGVNPDVFTYN 339
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 34/203 (16%)
Query: 195 EVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYL 254
EVL L NV+I Y + G ++AL L + +G K + T NAL+ +++ +L A+
Sbjct: 404 EVL--LWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWW 461
Query: 255 VHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEAS 314
V EM + PDT Y ++ C
Sbjct: 462 VKNEM--------------------------------RSTKIHPDTTTYNLLLGAACTLG 489
Query: 315 LFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFN 374
A + M C P+++TY L+ G K +L + + +LS + G F
Sbjct: 490 HLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFL 549
Query: 375 SLVHAYCRSRDYSYAYKLLKKMV 397
L Y R + AY + KK +
Sbjct: 550 ILAKKYTRLQRPGEAYLVYKKWL 572
>AT2G01740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:326136-327815 REVERSE
Length = 559
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 136/286 (47%), Gaps = 13/286 (4%)
Query: 202 NVLIRKYCQNGLWNAA---LEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
N LI +C+NG +A LE L F K +++N+L F + + LD ++
Sbjct: 95 NSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGV 154
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASL 315
M S + T + + CK+G+ + AL ++++ P+ + +T +I G C+A
Sbjct: 155 MLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGD 213
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
E A+ MR NVVTY L+ G +K ++ R + + S M+ + P+ ++ +
Sbjct: 214 LEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTT 273
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYS 435
++ + + D A K L KM+ G + Y ++I G+CGN L + E+ E
Sbjct: 274 IIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLK--EATEIVE---- 327
Query: 436 EMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDI 481
+M + +V + V + G+ + A N+ +++ +GF PD+
Sbjct: 328 DMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDV 373
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 133/309 (43%), Gaps = 29/309 (9%)
Query: 205 IRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGY 264
I +C++G AL+ +K + +T+ L+ + +A L+ A +++EM +
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 265 SMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMD 321
S++ T CK G+ + A + + + P++++YT +I G + + AM
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Query: 322 FLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYC 381
FL +M ++ Y +++ G +L I+ M P IF ++++AY
Sbjct: 290 FLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYF 349
Query: 382 RSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSM----------------- 424
+S A + K+++ G +P V + +I GI N L
Sbjct: 350 KSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVL 409
Query: 425 --------DVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKG 476
D +E+ E +S++ E G+V +K +++ LC G AF + M+ +G
Sbjct: 410 IDALCKEGDFIEV-ERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEG 468
Query: 477 FIPDIGTYS 485
+ D+ Y+
Sbjct: 469 LLLDLLAYT 477
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 124/288 (43%), Gaps = 18/288 (6%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
LI +C+ G A E R+ + + + L Y ++ F + D A +M N
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLN 296
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
G +D G LC GK ++A ++E K + VPD +++T M++ ++ +
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKA 356
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPG--IFNSL 376
A++ +++ P+VV ++ G + QL I+ C ++ L
Sbjct: 357 AVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA-------IVYFCIEKANDVMYTVL 409
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
+ A C+ D+ +L K+ + G P +Y I G+C +L +D +L +
Sbjct: 410 IDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNL--VDAFKLK----TR 463
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
M++ G++L+ + + L G +A V EM++ G PD +
Sbjct: 464 MVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVF 511
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 14/225 (6%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTA--YLVHR 257
+ ++ Y ++G AA+ +L + G++ + + ++ + +L A Y
Sbjct: 340 IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE 399
Query: 258 EMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEAS 314
+ +++ Y++ +LCK G + + L I + VPD +YT I+GLC+
Sbjct: 400 KANDVMYTV-------LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQG 452
Query: 315 LFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFN 374
+A RM + +++ Y L+ G K + +++ M+ G P +F+
Sbjct: 453 NLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFD 512
Query: 375 SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNE 419
L+ AY + + + A LL M + G V + CGNE
Sbjct: 513 LLIRAYEKEGNMAAASDLLLDMQRRGLVTA--VSDADCSKQCGNE 555
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 45/209 (21%)
Query: 315 LFEEAMDFLNRMRANSCIPNVVTYRILL-------CGCLRKKQLGRCKRILSLMIMEGCF 367
+ EA+ FL+R+R +S +P+ T + CG L K L+ ++ G
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLK-------FLAYLVSRGYT 53
Query: 368 PSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMD-V 426
P FNS+V C+ +A ++ M + GC+P + YN LI G C N D+ S V
Sbjct: 54 PHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV 113
Query: 427 LELAETAYS--------------------EMLE-----VGVVL-----NKVNVSNFARCL 456
LE ++ +ML+ +GV+L N V S +
Sbjct: 114 LESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTF 173
Query: 457 CGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
C G+ + A M P++ T++
Sbjct: 174 CKSGELQLALKSFHSMKRDALSPNVVTFT 202
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 82/193 (42%), Gaps = 10/193 (5%)
Query: 296 FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCK 355
+ P + ++S +C+ + A D ++ M C P+V++Y L+ G R +
Sbjct: 52 YTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAS 111
Query: 356 RIL-SLMIMEG--CFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILI 412
+L SL G C P FNSL + + + + + + M+KC C P V Y+ I
Sbjct: 112 LVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWI 170
Query: 413 GGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREM 472
C + + L+LA ++ M + N V + C G E A ++ +EM
Sbjct: 171 DTFCKSGE------LQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224
Query: 473 MSKGFIPDIGTYS 485
++ TY+
Sbjct: 225 RRVRMSLNVVTYT 237
>AT1G74750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28086800-28089367 FORWARD
Length = 855
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 143/377 (37%), Gaps = 82/377 (21%)
Query: 110 FGSKTQKFLRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEM 169
+G ++ L F ++ +VL + N + FF W RQ G+ H Y ++
Sbjct: 309 WGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMV-- 366
Query: 170 IESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGY 229
N +QF + KLL+ ++R C
Sbjct: 367 -------GNLGRAKQFGE---------INKLLDEMVRDGC-------------------- 390
Query: 230 KASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALT 289
K + +TYN L+ + RA L A V +M G C+
Sbjct: 391 KPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAG---------------CE--------- 426
Query: 290 LIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKK 349
PD + Y +I +A + AMD RM+ P+ TY +++ CL K
Sbjct: 427 --------PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII-NCLGKA 477
Query: 350 -QLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVY 408
L R+ M+ +GC P+ FN ++ + ++R+Y A KL + M G QP V Y
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 409 NIL--IGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAF 466
+I+ + G CG LE AE ++EM V ++ G +KA+
Sbjct: 538 SIVMEVLGHCG--------FLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAW 589
Query: 467 NVIREMMSKGFIPDIGT 483
+ M+ G P++ T
Sbjct: 590 QWYQAMLQAGLRPNVPT 606
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Query: 337 TYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKM 396
TY ++ R KQ G ++L M+ +GC P+ +N L+H+Y R+ A + +M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 397 VKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCL 456
+ GC+P V Y LI + L++A Y M E G+ + S CL
Sbjct: 421 QEAGCEPDRVTYCTLI------DIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCL 474
Query: 457 CGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
G A + EM+ +G P++ T++
Sbjct: 475 GKAGHLPAAHRLFCEMVGQGCTPNLVTFN 503
>AT1G22960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8128086-8130242 REVERSE
Length = 718
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 14/288 (4%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
N LI YC+ GL++ A + + G + TYN + ++D A RE+
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA----RELL 366
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFE 317
+ + D + H K GK+ +A L + + P + Y +I GLCE+ E
Sbjct: 367 SSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
A M P+V+TY L+ G ++ L + M+ +G P + +
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQ-PGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
R D A++L ++MV P +YN+ I G+C +L + +E +
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL--VKAIEFQR----K 540
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+ VG+V + V + R G+F+ A N+ EM+ K P + TY
Sbjct: 541 IFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITY 588
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 22/293 (7%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYK----ASRLTYNALVIVFLRAEKLDTAYLVHR 257
N LI C++G LE RLK+ +TY LV F++ L A V+
Sbjct: 413 NTLIDGLCESG----NLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYD 468
Query: 258 EMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK----EEFVPDTILYTKMISGLCEA 313
EM G D + A + G A L E+ + PD +Y I GLC+
Sbjct: 469 EMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKV 528
Query: 314 SLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIF 373
+A++F ++ +P+ VTY ++ G L Q + + M+ + +PS +
Sbjct: 529 GNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITY 588
Query: 374 NSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC--GNEDLPSMDVLELAE 431
L++ + ++ A++ +M K G +P + +N L+ G+C GN ++ A
Sbjct: 589 FVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGN--------IDEAY 640
Query: 432 TAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+M E G+ NK + + C K+E+ + +EM+ K PD T+
Sbjct: 641 RYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTH 693
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 155/425 (36%), Gaps = 75/425 (17%)
Query: 119 RQFREKLSE-SLVAEVLNLVK-NPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNN 176
QFR L++ +L+ VLN+++ PE+ +FF W RQ ++ + A+LE++
Sbjct: 76 HQFRLLLTDPNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILA----- 130
Query: 177 SNDRIPEQFL----------REIKD-----------------------EDKEVLGKLL-- 201
ND + E +L EI D K + K L
Sbjct: 131 ENDLMSEAYLVAERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLS 190
Query: 202 ----------------NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLR 245
N++++ + + N A + + G + +T+N ++ +
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 246 AEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTIL 302
A L+ + EM T + K GK +A + + F
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 303 YTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMI 362
+ +I G C+ LF++A + M P TY I +C ++ + +LS M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM- 369
Query: 363 MEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC--GNED 420
P +N+L+H Y + + A L + P V YN LI G+C GN
Sbjct: 370 ---AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN-- 424
Query: 421 LPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
LE A+ EM + + + + + G A V EM+ KG PD
Sbjct: 425 ------LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478
Query: 481 IGTYS 485
Y+
Sbjct: 479 GYAYT 483
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 121/284 (42%), Gaps = 15/284 (5%)
Query: 161 AVYNALLE-MIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALE 219
YN L++ + ES N R+ E+ ++ D L++ + +NG + A E
Sbjct: 410 VTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITY----TTLVKGFVKNGNLSMATE 465
Query: 220 ELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTL-GCFAHSL 278
+ G K Y + LR D A+ +H EM + T+ L
Sbjct: 466 VYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGL 525
Query: 279 CKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNV 335
CK G A+ I + VPD + YT +I G E F+ A + + M P+V
Sbjct: 526 CKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSV 585
Query: 336 VTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKK 395
+TY +L+ G + +L + + + M G P+ N+L++ C++ + AY+ L K
Sbjct: 586 ITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCK 645
Query: 396 MVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLE 439
M + G P Y +LI C E +V++L Y EML+
Sbjct: 646 MEEEGIPPNKYSYTMLISKNCDFEKWE--EVVKL----YKEMLD 683
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD
Length = 666
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 131/289 (45%), Gaps = 13/289 (4%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ + +I + C++G + A + + G + TYN ++ F + A + R+M
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLF 316
+ D T + K GK +A L ++ PDT+ Y MI G C+ + F
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
++A + M + P+VVT+ ++ R K++ ++L + G + +N+L
Sbjct: 418 DDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
+H +C + + A L ++M+ G P + NIL+ G C NE L + LEL E
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE--EALELFEVIQMS 531
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+++ V + + +C K ++A+++ + G PD+ TY+
Sbjct: 532 KIDLDTVAYNIIIHG----MCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 576
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 13/253 (5%)
Query: 234 LTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL--- 290
+TYN+++ F + + D A + M +L S D T C+A + + + L
Sbjct: 402 VTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 291 IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQ 350
I + V +T Y +I G CE A D M ++ P+ +T ILL G ++
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 351 LGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNI 410
L + ++ M +N ++H C+ A+ L + G +P YN+
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 411 LIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIR 470
+I G CG + +VL + +M + G + + R G+ +K+ +I
Sbjct: 578 MISGFCGKSAISDANVL------FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 471 EMMSKGFIPDIGT 483
EM S GF D T
Sbjct: 632 EMRSNGFSGDAFT 644
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 30/296 (10%)
Query: 217 ALEELGRLKDFGYKASRLTYNALVI-VFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFA 275
A+ ++ + G +T+N L+ + L L+ A LV++ M G +D T G
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK-MVGKGLHIDVVTYGTIV 268
Query: 276 HSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCI 332
+ +CK G + AL L+ K E PD ++Y+ +I LC+ +A + M
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 333 PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKL 392
PNV TY ++ G + +R+L MI P FN+L+ A + A KL
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 393 LKKMVKCGCQPGYVVYNILIGGICGN---EDLPSM-DVLELAE-TAYSEMLEV------- 440
+M+ P V YN +I G C + +D M D++ + ++ +++V
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRV 448
Query: 441 -------------GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGT 483
G+V N + C V A ++ +EM+S G PD T
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 23/251 (9%)
Query: 235 TYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE 294
++N L+ F KL + +++ LG+ D T H LC + +AL L
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF--- 199
Query: 295 EFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRC 354
G + F EA+ ++M P V+T+ L+ G + ++
Sbjct: 200 --------------GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEA 245
Query: 355 KRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG 414
+++ M+ +G + ++V+ C+ D A LL KM + +P V+Y+ +I
Sbjct: 246 AALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDR 305
Query: 415 ICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMS 474
+C +D D A+ +SEMLE G+ N + C G++ A ++R+M+
Sbjct: 306 LC--KDGHHSD----AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 475 KGFIPDIGTYS 485
+ PD+ T++
Sbjct: 360 REINPDVLTFN 370
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 3/199 (1%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
N +I YC+ + ++ L + G A+ TYN L+ F + L+ A + +EM
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFE 317
+ G D+ T + C+ K +AL L I+ + DT+ Y +I G+C+ S +
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
EA D + + P+V TY +++ G K + + M G P +N+L+
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 378 HAYCRSRDYSYAYKLLKKM 396
++ + + +L+ +M
Sbjct: 615 RGCLKAGEIDKSIELISEM 633
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 76/185 (41%), Gaps = 3/185 (1%)
Query: 184 QFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF 243
Q LREI N LI +C+ NAA + + G +T N L+ F
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 244 LRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDT 300
EKL+ A + + +D+ H +CK K +A L + PD
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 301 ILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSL 360
Y MISG C S +A ++M+ N P+ TY L+ GCL+ ++ + ++S
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 361 MIMEG 365
M G
Sbjct: 633 MRSNG 637
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 95/252 (37%), Gaps = 29/252 (11%)
Query: 237 NALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEK 293
N ++ VF+R + D A ++R+M ++ ++ C K +L+ + K
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 294 EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGR 353
F PD + + ++ GLC EA+ M + V +
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALF--------------- 214
Query: 354 CKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIG 413
M+ G P FN+L++ C A L+ KMV G V Y ++
Sbjct: 215 -----DQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 414 GICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMM 473
G+C D S A S+M E + + V S LC G A + EM+
Sbjct: 270 GMCKMGDTKS------ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 474 SKGFIPDIGTYS 485
KG P++ TY+
Sbjct: 324 EKGIAPNVFTYN 335
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD
Length = 806
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 131/289 (45%), Gaps = 13/289 (4%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ + +I + C++G + A + + G + TYN ++ F + A + R+M
Sbjct: 298 IYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM 357
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLF 316
+ D T + K GK +A L ++ PDT+ Y MI G C+ + F
Sbjct: 358 IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRF 417
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
++A + M + P+VVT+ ++ R K++ ++L + G + +N+L
Sbjct: 418 DDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTL 473
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
+H +C + + A L ++M+ G P + NIL+ G C NE L + LEL E
Sbjct: 474 IHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE--EALELFEVIQMS 531
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+++ V + + +C K ++A+++ + G PD+ TY+
Sbjct: 532 KIDLDTVAYNIIIHG----MCKGSKVDEAWDLFCSLPIHGVEPDVQTYN 576
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 13/253 (5%)
Query: 234 LTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL--- 290
+TYN+++ F + + D A + M +L S D T C+A + + + L
Sbjct: 402 VTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 291 IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQ 350
I + V +T Y +I G CE A D M ++ P+ +T ILL G ++
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 351 LGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNI 410
L + ++ M +N ++H C+ A+ L + G +P YN+
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 411 LIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIR 470
+I G CG + +VL + +M + G + + R G+ +K+ +I
Sbjct: 578 MISGFCGKSAISDANVL------FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 471 EMMSKGFIPDIGT 483
EM S GF D T
Sbjct: 632 EMRSNGFSGDAFT 644
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 30/296 (10%)
Query: 217 ALEELGRLKDFGYKASRLTYNALVI-VFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFA 275
A+ ++ + G +T+N L+ + L L+ A LV++ M G +D T G
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK-MVGKGLHIDVVTYGTIV 268
Query: 276 HSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCI 332
+ +CK G + AL L+ K E PD ++Y+ +I LC+ +A + M
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 333 PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKL 392
PNV TY ++ G + +R+L MI P FN+L+ A + A KL
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388
Query: 393 LKKMVKCGCQPGYVVYNILIGGICGN---EDLPSM-DVLELAE-TAYSEMLEV------- 440
+M+ P V YN +I G C + +D M D++ + ++ +++V
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRV 448
Query: 441 -------------GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGT 483
G+V N + C V A ++ +EM+S G PD T
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 23/251 (9%)
Query: 235 TYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE 294
++N L+ F KL + +++ LG+ D T H LC + +AL L
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF--- 199
Query: 295 EFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRC 354
G + F EA+ ++M P V+T+ L+ G + ++
Sbjct: 200 --------------GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEA 245
Query: 355 KRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG 414
+++ M+ +G + ++V+ C+ D A LL KM + +P V+Y+ +I
Sbjct: 246 AALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDR 305
Query: 415 ICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMS 474
+C +D D A+ +SEMLE G+ N + C G++ A ++R+M+
Sbjct: 306 LC--KDGHHSD----AQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 475 KGFIPDIGTYS 485
+ PD+ T++
Sbjct: 360 REINPDVLTFN 370
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 20/255 (7%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
N +I YC+ + ++ L + G A+ TYN L+ F + L+ A + +EM
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFE 317
+ G D+ T + C+ K +AL L I+ + DT+ Y +I G+C+ S +
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
EA D + + P+V TY +++ G K + + M G P +N+L+
Sbjct: 555 EAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 378 HAYCRSRDYSYAYKLLKKM-----------------VKCGCQPGYVVYNILIGGICGNED 420
++ + + +L+ +M + C ++ N L I G
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYLRPKINGETS 674
Query: 421 LPSMDVLELAETAYS 435
V+ELAE Y+
Sbjct: 675 SIPRYVVELAEELYT 689
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 76/185 (41%), Gaps = 3/185 (1%)
Query: 184 QFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF 243
Q LREI N LI +C+ NAA + + G +T N L+ F
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 244 LRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDT 300
EKL+ A + + +D+ H +CK K +A L + PD
Sbjct: 513 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 301 ILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSL 360
Y MISG C S +A ++M+ N P+ TY L+ GCL+ ++ + ++S
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 361 MIMEG 365
M G
Sbjct: 633 MRSNG 637
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 95/252 (37%), Gaps = 29/252 (11%)
Query: 237 NALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEK 293
N ++ VF+R + D A ++R+M ++ ++ C K +L+ + K
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 294 EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGR 353
F PD + + ++ GLC EA+ M + V
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVA----------------- 212
Query: 354 CKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIG 413
+ M+ G P FN+L++ C A L+ KMV G V Y ++
Sbjct: 213 ---LFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 414 GICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMM 473
G+C D S A S+M E + + V S LC G A + EM+
Sbjct: 270 GMCKMGDTKS------ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 474 SKGFIPDIGTYS 485
KG P++ TY+
Sbjct: 324 EKGIAPNVFTYN 335
>AT1G52620.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19603828-19606287 FORWARD
Length = 819
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 128/323 (39%), Gaps = 45/323 (13%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N+LI + C+ G A+ L G + L+Y L+ + ++++ D A + +M+
Sbjct: 349 NILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAE 408
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
G D T G H L +G DA+ + K PD +Y ++SGLC+ F
Sbjct: 409 RGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLP 468
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGC------------ 366
A + M + +P+ Y L+ G +R +++ SL + +G
Sbjct: 469 AKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIK 528
Query: 367 -----------------------FPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
P +++++ Y + +D + A K+ + M K C+P
Sbjct: 529 GFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKP 588
Query: 404 GYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCG-VGKF 462
V Y LI G C D ++AE + EM +V N V + R L
Sbjct: 589 NVVTYTSLINGFCCQGD------FKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTL 642
Query: 463 EKAFNVIREMMSKGFIPDIGTYS 485
EKA MM+ +P+ T++
Sbjct: 643 EKAVYYWELMMTNKCVPNEVTFN 665
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/366 (20%), Positives = 165/366 (45%), Gaps = 31/366 (8%)
Query: 133 VLNLVKNPELGIKFFIW--AGRQIGYSHTQAVYNALLEMIESTNNNSNDRI---PEQFLR 187
V + +++ E+G+K F W + ++ + ++ L+++ + RI E L
Sbjct: 70 VFDRIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLL------ARYRIFNEIEDVLG 123
Query: 188 EIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKD-FGYKASRLTYNALVIVFLRA 246
+++E+ ++ + L+ ++ Y ++G + A+E + + + + N+L+ + +++
Sbjct: 124 NLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKS 183
Query: 247 EKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILY 303
+L A V+ EM + G S+D+++ +C GK LIE + +P+ + Y
Sbjct: 184 RRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFY 243
Query: 304 TKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIM 363
+I G C+ E A ++ +P + T+ ++ G ++ R+LS +
Sbjct: 244 NTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKE 303
Query: 364 EGCFPSPGIFNSLVHAYCRSRDYSYAYKL-----LKKMVKCGCQPGYVVYNILIGGICGN 418
G S N+++ A Y + YK+ + ++ C+P YNILI +C
Sbjct: 304 RGLRVSVWFLNNIIDA-----KYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKE 358
Query: 419 EDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFI 478
E+A E + G++ N ++ + + C +++ A ++ +M +G
Sbjct: 359 GK------KEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCK 412
Query: 479 PDIGTY 484
PDI TY
Sbjct: 413 PDIVTY 418
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 27/265 (10%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N +I+ +C++G+ + AL + R+ + + TY+ ++ +++ + + TA + R M
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEK 583
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWR---DALTLIEKEEFVPDTILYTKMISGLC-EASLFE 317
+ T + C G ++ + ++ + VP+ + YT +I L E+S E
Sbjct: 584 NKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLE 643
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKK--------------QLGRCKRILSLMIM 363
+A+ + M N C+PN VT+ LL G ++K Q M
Sbjct: 644 KAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKS 703
Query: 364 EGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC--GN-ED 420
+G +NS + C A KMVK G P V + ++ G C GN +
Sbjct: 704 DGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQ 763
Query: 421 LPSMDVLELAETA------YSEMLE 439
+MD L E YS++LE
Sbjct: 764 WRNMDFCNLGEKGLEVAVRYSQVLE 788
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 116/317 (36%), Gaps = 67/317 (21%)
Query: 236 YNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAG------------- 282
YN ++ + + ++ AYLV +E+ G+ T G + CK G
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVK 302
Query: 283 -----------------KWR--------DALTLIEKEEFVPDTILYTKMISGLCEASLFE 317
K+R +++ I + PD Y +I+ LC+ E
Sbjct: 303 ERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKE 362
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
A+ FL+ IPN ++Y L+ + K+ ++L M GC P + L+
Sbjct: 363 VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILI 422
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN----------------EDL 421
H S A + K++ G P +YN+L+ G+C L
Sbjct: 423 HGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL 482
Query: 422 PSMDV-------------LELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNV 468
P V + A +S +E GV ++ V+ + + C G ++A
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALAC 542
Query: 469 IREMMSKGFIPDIGTYS 485
+ M + +PD TYS
Sbjct: 543 MNRMNEEHLVPDKFTYS 559
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 110/298 (36%), Gaps = 12/298 (4%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ N+L+ C+ G + A + D Y L+ F+R+ D A V
Sbjct: 452 IYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLS 511
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLF 316
G +D C++G +AL + + E VPD Y+ +I G +
Sbjct: 512 VEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDM 571
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
A+ M N C PNVVTY L+ G + + M + P+ + +L
Sbjct: 572 ATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTL 631
Query: 377 VHAYCR-SRDYSYAYKLLKKMVKCGCQPGYVVYNILI--------GGICGNEDLPSMDVL 427
+ + + S A + M+ C P V +N L+ G + D +
Sbjct: 632 IRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQS 691
Query: 428 ELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
L + M G + ++ CLC G + A +M+ KGF PD +++
Sbjct: 692 SLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFA 749
>AT4G26800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13490251-13491458 FORWARD
Length = 369
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 122/266 (45%), Gaps = 9/266 (3%)
Query: 223 RLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAG 282
++ G + +T ++LV F + + A V +M +G D +LCK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 283 KWRDALTLIEKEE---FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYR 339
AL ++++ + P+ + Y+ +I+GLC++ +A L+ M + PNV+T+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 340 ILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKC 399
L+ ++ +L + + +MI P+ ++SL++ C A K+L M+
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 400 GCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGV 459
GC P V Y+ L G + + D ++L + +M + GV N V+ + +
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVD--DGIKLLD----DMPQRGVAANTVSCNTLIKGYFQA 236
Query: 460 GKFEKAFNVIREMMSKGFIPDIGTYS 485
GK + A V M S G IP+I +Y+
Sbjct: 237 GKIDLALGVFGYMTSNGLIPNIRSYN 262
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 125/287 (43%), Gaps = 9/287 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
+LI C+N L ALE L R+KD G + +TY++L+ ++ +L A EM +
Sbjct: 52 TILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDS 111
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWR---DALTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
+ + T + K GK ++ + P+ Y+ +I GLC + +E
Sbjct: 112 KKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDE 171
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ L+ M + C PNVVTY L G + ++ ++L M G + N+L+
Sbjct: 172 AIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIK 231
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
Y ++ A + M G P YNI++ G+ N + +E A + + M
Sbjct: 232 GYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGE------VEKALSRFEHMQ 285
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ L+ + + +C ++A+++ ++ K PD Y+
Sbjct: 286 KTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYT 332
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 119/288 (41%), Gaps = 15/288 (5%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
L+ +C + A+ G+++ G K + L+ + + A V + M + G
Sbjct: 19 LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG 78
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEEAM 320
S + T LCK+G+ DA L ++ ++ P+ I ++ +I + +
Sbjct: 79 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 138
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
M S PNV TY L+ G ++ ++L LMI +GC P+ +++L + +
Sbjct: 139 SVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEV 440
+S KLL M + G V N LI G ++LA + M
Sbjct: 199 FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF------QAGKIDLALGVFGYMTSN 252
Query: 441 GVVLNKVNVSNFARCLCGV---GKFEKAFNVIREMMSKGFIPDIGTYS 485
G++ N+ ++ L G+ G+ EKA + M DI TY+
Sbjct: 253 GLI---PNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYT 297
>AT5G18390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6090954-6092333 FORWARD
Length = 459
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 158/373 (42%), Gaps = 20/373 (5%)
Query: 115 QKFLRQFREKLSESLVAEVLNLV-KNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIEST 173
++ L R ++ V VL ++ ++FF WA Y+ T Y E+ +S
Sbjct: 65 ERSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYE---ELAKSL 121
Query: 174 NNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEEL-GRLKDFGYKAS 232
++ + L+++KD ++ G+ L +I +Y +NG + A+E G K G + +
Sbjct: 122 ASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQT 181
Query: 233 RLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA---LT 289
YN+L+ + AY + R M G D T + C AGK ++A L
Sbjct: 182 VDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLD 241
Query: 290 LIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKK 349
+ + F P +I GL A E A + +++M +P++ T+ IL+ +
Sbjct: 242 EMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSG 301
Query: 350 QLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYN 409
++ C + G + +L+ A + A++LL V+ G +P +Y
Sbjct: 302 EVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYA 361
Query: 410 ILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVN--VSNFARCLCGV-GKFEKAF 466
+I G+C N + + A+S ++ V + N V +CG GKF A
Sbjct: 362 PIIKGMCRN---------GMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAA 412
Query: 467 NVIREMMSKGFIP 479
N + EM G +P
Sbjct: 413 NYLVEMTEMGLVP 425
>AT1G18900.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 146/377 (38%), Gaps = 82/377 (21%)
Query: 110 FGSKTQKFLRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEM 169
+G ++ L+ ++ +VL + + + FF W RQ G+ H Y ++
Sbjct: 314 WGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMV-- 371
Query: 170 IESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGY 229
N +QF + KLL+ ++R CQ
Sbjct: 372 -------GNLGRAKQF---------GAINKLLDEMVRDGCQ------------------- 396
Query: 230 KASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALT 289
+ +TYN L+ + RA L+ A V +M G CK
Sbjct: 397 -PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG---------------CK--------- 431
Query: 290 LIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKK 349
PD + Y +I +A + AMD RM+A P+ TY +++ CL K
Sbjct: 432 --------PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII-NCLGKA 482
Query: 350 -QLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVY 408
L ++ M+ +GC P+ +N ++ + ++R+Y A KL + M G +P V Y
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 409 NILIG--GICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAF 466
+I++ G CG LE AE ++EM + + ++ G EKA+
Sbjct: 543 SIVMEVLGHCG--------YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 467 NVIREMMSKGFIPDIGT 483
+ M+ G P++ T
Sbjct: 595 QWYQAMLHAGLRPNVPT 611
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 165/436 (37%), Gaps = 66/436 (15%)
Query: 53 LFDPEDPMS-LDNSRMESISSKEFS--FLRDSLLESKFDTGKRSNDAVLISNAILNNDDG 109
+ DP P+S + +S +++I + F+ + R + ES T + N N
Sbjct: 171 MVDPTRPISSVKSSNVKAIRREHFAKIYPRSAAKESSVGTTR---------NPSSNFRGA 221
Query: 110 FGSKTQKFLRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEM 169
++ F++ FR+ +S S+V + L N Y +
Sbjct: 222 KEAERTGFVKGFRQ-VSNSVVGKSLPTTNN----------------------TYGKRTSV 258
Query: 170 IESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGY 229
++ + +SN +P F + K G L R+YC +G + + R +G
Sbjct: 259 LQRPHIDSNRFVPSGFSNSSVEMMKGPSGTALTS--RQYCNSGHIVENVSSVLRRFRWGP 316
Query: 230 KASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALT 289
A AL + LR + A V ++M++ G ++ F W
Sbjct: 317 AAEE----ALQNLGLRIDAYQ-ANQVLKQMNDYGNALGFFY-------------W----- 353
Query: 290 LIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKK 349
L + F D YT M+ L A F L+ M + C PN VTY L+ R
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 350 QLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYN 409
L + + M GC P + +L+ + ++ A + ++M G P Y+
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 410 ILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVI 469
++I + LP+ A + EM++ G N V + ++ A +
Sbjct: 474 VIINCLGKAGHLPA------AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY 527
Query: 470 REMMSKGFIPDIGTYS 485
R+M + GF PD TYS
Sbjct: 528 RDMQNAGFEPDKVTYS 543
>AT1G18900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6529778-6532360 FORWARD
Length = 860
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 146/377 (38%), Gaps = 82/377 (21%)
Query: 110 FGSKTQKFLRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEM 169
+G ++ L+ ++ +VL + + + FF W RQ G+ H Y ++
Sbjct: 314 WGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMV-- 371
Query: 170 IESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGY 229
N +QF + KLL+ ++R CQ
Sbjct: 372 -------GNLGRAKQF---------GAINKLLDEMVRDGCQ------------------- 396
Query: 230 KASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALT 289
+ +TYN L+ + RA L+ A V +M G CK
Sbjct: 397 -PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG---------------CK--------- 431
Query: 290 LIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKK 349
PD + Y +I +A + AMD RM+A P+ TY +++ CL K
Sbjct: 432 --------PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII-NCLGKA 482
Query: 350 -QLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVY 408
L ++ M+ +GC P+ +N ++ + ++R+Y A KL + M G +P V Y
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 409 NILIG--GICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAF 466
+I++ G CG LE AE ++EM + + ++ G EKA+
Sbjct: 543 SIVMEVLGHCG--------YLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAW 594
Query: 467 NVIREMMSKGFIPDIGT 483
+ M+ G P++ T
Sbjct: 595 QWYQAMLHAGLRPNVPT 611
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 165/436 (37%), Gaps = 66/436 (15%)
Query: 53 LFDPEDPMS-LDNSRMESISSKEFS--FLRDSLLESKFDTGKRSNDAVLISNAILNNDDG 109
+ DP P+S + +S +++I + F+ + R + ES T + N N
Sbjct: 171 MVDPTRPISSVKSSNVKAIRREHFAKIYPRSAAKESSVGTTR---------NPSSNFRGA 221
Query: 110 FGSKTQKFLRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEM 169
++ F++ FR+ +S S+V + L N Y +
Sbjct: 222 KEAERTGFVKGFRQ-VSNSVVGKSLPTTNN----------------------TYGKRTSV 258
Query: 170 IESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGY 229
++ + +SN +P F + K G L R+YC +G + + R +G
Sbjct: 259 LQRPHIDSNRFVPSGFSNSSVEMMKGPSGTALTS--RQYCNSGHIVENVSSVLRRFRWGP 316
Query: 230 KASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALT 289
A AL + LR + A V ++M++ G ++ F W
Sbjct: 317 AAEE----ALQNLGLRIDAYQ-ANQVLKQMNDYGNALGFFY-------------W----- 353
Query: 290 LIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKK 349
L + F D YT M+ L A F L+ M + C PN VTY L+ R
Sbjct: 354 LKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRAN 413
Query: 350 QLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYN 409
L + + M GC P + +L+ + ++ A + ++M G P Y+
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 410 ILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVI 469
++I + LP+ A + EM++ G N V + ++ A +
Sbjct: 474 VIINCLGKAGHLPA------AHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY 527
Query: 470 REMMSKGFIPDIGTYS 485
R+M + GF PD TYS
Sbjct: 528 RDMQNAGFEPDKVTYS 543
>AT1G13040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4447647-4449200 FORWARD
Length = 517
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 137/316 (43%), Gaps = 47/316 (14%)
Query: 210 QNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSF 269
++G+ + A++ ++ Y+ YN + V +R + + A ++ +M +G+S+ F
Sbjct: 21 KSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPF 80
Query: 270 TLGCFAHSLCKAGKWR--DA-LTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRM 326
T F LCK K+ DA L+ +E F+PD + + LC + A+ M
Sbjct: 81 TYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCM 140
Query: 327 RANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFP------------------ 368
P+VV+Y IL+ G R ++ I + MI G P
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKV 200
Query: 369 ------------------SPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNI 410
S ++N+L+ +C++ A L M K GC+P V YN+
Sbjct: 201 DLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNV 260
Query: 411 LIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFN-VI 469
L+ N ++L+ AE +EM+ G+ L+ + + + C V +K +N ++
Sbjct: 261 LLNYYYDN------NMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMV 314
Query: 470 REMMSKGFIPDIGTYS 485
+EM +GF D+ +YS
Sbjct: 315 KEMEPRGFC-DVVSYS 329
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 118/301 (39%), Gaps = 9/301 (2%)
Query: 183 EQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIV 242
E EIK ++ + N LI +C+ G A + G + +TYN L+
Sbjct: 205 EMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNY 264
Query: 243 FLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE---EFVPD 299
+ L A V EM G +D+++ C+ + KE D
Sbjct: 265 YYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCD 324
Query: 300 TILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILS 359
+ Y+ +I C AS +A MR + NVVTY L+ LR+ K++L
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384
Query: 360 LMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNE 419
M G P + +++ C+S + AY + M++ P + YN LI G+C +
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 420 DLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIP 479
+ + ++L E + + K + R K A+ V +MM KGF
Sbjct: 445 RVT--EAIKLFEDMKGKECCPDELTFKFIIGGLIRG----KKLSAAYKVWDQMMDKGFTL 498
Query: 480 D 480
D
Sbjct: 499 D 499
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 3/183 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
+ LI +C+ A ++ G + +TY +L+ FLR A + +M+
Sbjct: 329 STLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTE 388
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
LG S D LCK+G A + + E PD I Y +ISGLC + E
Sbjct: 389 LGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTE 448
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ M+ C P+ +T++ ++ G +R K+L ++ M+ +G + ++L+
Sbjct: 449 AIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIK 508
Query: 379 AYC 381
A C
Sbjct: 509 ASC 511
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 131/339 (38%), Gaps = 54/339 (15%)
Query: 193 DKEVLGKL-----LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAE 247
D E LG + NV + C+ A++ + G + ++Y L+ RA
Sbjct: 104 DMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAG 163
Query: 248 KLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE----EFVPDTILY 303
K+ A + M G S D+ LC A K A ++ +E T++Y
Sbjct: 164 KVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVY 223
Query: 304 TKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIM 363
+ISG C+A E+A + M C P++VTY +LL L R + +++ M+
Sbjct: 224 NALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVR 283
Query: 364 EGC-----------------------------------FPSPGIFNSLVHAYCRSRDYSY 388
G F +++L+ +CR+ +
Sbjct: 284 SGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRK 343
Query: 389 AYKLLKKMVKCGCQPGYVVYNILIGGIC--GNEDLPSMDVLELAETAYSEMLEVGVVLNK 446
AY+L ++M + G V Y LI GN +A+ +M E+G+ ++
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNS--------SVAKKLLDQMTELGLSPDR 395
Query: 447 VNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ + LC G +KA+ V +M+ PD +Y+
Sbjct: 396 IFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYN 434
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 114/271 (42%), Gaps = 14/271 (5%)
Query: 153 QIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQ-- 210
+IG YN LL +NN R E + E+ ++ N L++++C+
Sbjct: 248 KIGCEPDLVTYNVLLNYY--YDNNMLKR-AEGVMAEMVRSGIQLDAYSYNQLLKRHCRVS 304
Query: 211 --NGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDS 268
+ +N ++E+ + G+ ++Y+ L+ F RA AY + EM G M+
Sbjct: 305 HPDKCYNFMVKEM---EPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNV 360
Query: 269 FTLGCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLCEASLFEEAMDFLNR 325
T + + G A L+++ PD I YT ++ LC++ ++A N
Sbjct: 361 VTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFND 420
Query: 326 MRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRD 385
M + P+ ++Y L+ G R ++ ++ M + C P F ++ R +
Sbjct: 421 MIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKK 480
Query: 386 YSYAYKLLKKMVKCGCQPGYVVYNILIGGIC 416
S AYK+ +M+ G V + LI C
Sbjct: 481 LSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
>AT5G28460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10374927-10377227 FORWARD
Length = 766
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 121/295 (41%), Gaps = 16/295 (5%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
L I C+N N A + L L +NAL+ R + + +M
Sbjct: 262 LTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMD 321
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE---------FVPDTILYTKMISGLC 311
+ D TLG ++LCK+ + +AL + E+ D+I + +I GLC
Sbjct: 322 EVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 312 EASLFEEAMDFLNRMR-ANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSP 370
+ +EA + L RM+ C+PN VTY L+ G R +L K ++S M + P+
Sbjct: 382 KVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 371 GIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELA 430
N++V CR + A M K G + V Y LI C S+ +E A
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC------SVSNVEKA 495
Query: 431 ETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
Y +MLE G + LC V + A V+ ++ GF D+ Y+
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 18/274 (6%)
Query: 223 RLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM----SNLG--YSMDSFTLGCFAH 276
++ + + +T L+ ++ ++D A V +M ++ G DS
Sbjct: 319 KMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLID 378
Query: 277 SLCKAGKWRDALTLIEK----EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCI 332
LCK G+ ++A L+ + E VP+ + Y +I G C A E A + ++RM+ +
Sbjct: 379 GLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 333 PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKL 392
PNVVT ++ G R L M EG + + +L+HA C + A
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 393 LKKMVKCGCQPGYVVYNILIGGICG-NEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSN 451
+KM++ GC P +Y LI G+C D ++ V+E ++ E G L+ + +
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE-------KLKEGGFSLDLLAYNM 551
Query: 452 FARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
C EK + ++ +M +G PD TY+
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYN 585
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 134/308 (43%), Gaps = 11/308 (3%)
Query: 183 EQFLREIKDEDKEVLGKLL-NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVI 241
E+ L +K E++ V + N LI YC+ G A E + R+K+ K + +T N +V
Sbjct: 390 EELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVG 449
Query: 242 VFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVP 298
R L+ A + +M G + T H+ C A+ EK P
Sbjct: 450 GMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSP 509
Query: 299 DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRIL 358
D +Y +ISGLC+ +A+ + +++ +++ Y +L+ K + +L
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Query: 359 SLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
+ M EG P +N+L+ + + +D+ +++++M + G P Y +I C
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC-- 627
Query: 419 EDLPSMDVLELAETAYSEM-LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGF 477
S+ L+ A + +M L V N V + +G F +A ++ EM K
Sbjct: 628 ----SVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Query: 478 IPDIGTYS 485
P++ TY+
Sbjct: 684 RPNVETYN 691
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 92/228 (40%), Gaps = 4/228 (1%)
Query: 198 GKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHR 257
K+ LI CQ + A+ + +LK+ G+ L YN L+ +F + Y +
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLT 570
Query: 258 EMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEAS 314
+M G DS T K + ++E+ + P Y +I C
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 315 LFEEAMDFLNRMRANSCI-PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIF 373
+EA+ M +S + PN V Y IL+ + G+ + M M+ P+ +
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 374 NSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDL 421
N+L KL+ +MV+ C+P + IL+ + G+++L
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
>AT5G28370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:10332375-10334558 REVERSE
Length = 727
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 121/295 (41%), Gaps = 16/295 (5%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
L I C+N N A + L L +NAL+ R + + +M
Sbjct: 262 LTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMD 321
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE---------FVPDTILYTKMISGLC 311
+ D TLG ++LCK+ + +AL + E+ D+I + +I GLC
Sbjct: 322 EVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLC 381
Query: 312 EASLFEEAMDFLNRMR-ANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSP 370
+ +EA + L RM+ C+PN VTY L+ G R +L K ++S M + P+
Sbjct: 382 KVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNV 441
Query: 371 GIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELA 430
N++V CR + A M K G + V Y LI C S+ +E A
Sbjct: 442 VTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC------SVSNVEKA 495
Query: 431 ETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
Y +MLE G + LC V + A V+ ++ GF D+ Y+
Sbjct: 496 MYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 18/274 (6%)
Query: 223 RLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM----SNLG--YSMDSFTLGCFAH 276
++ + + +T L+ ++ ++D A V +M ++ G DS
Sbjct: 319 KMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLID 378
Query: 277 SLCKAGKWRDALTLIEK----EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCI 332
LCK G+ ++A L+ + E VP+ + Y +I G C A E A + ++RM+ +
Sbjct: 379 GLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 333 PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKL 392
PNVVT ++ G R L M EG + + +L+HA C + A
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 393 LKKMVKCGCQPGYVVYNILIGGICG-NEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSN 451
+KM++ GC P +Y LI G+C D ++ V+E ++ E G L+ + +
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE-------KLKEGGFSLDLLAYNM 551
Query: 452 FARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
C EK + ++ +M +G PD TY+
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYN 585
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 134/308 (43%), Gaps = 11/308 (3%)
Query: 183 EQFLREIKDEDKEVLGKLL-NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVI 241
E+ L +K E++ V + N LI YC+ G A E + R+K+ K + +T N +V
Sbjct: 390 EELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVG 449
Query: 242 VFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVP 298
R L+ A + +M G + T H+ C A+ EK P
Sbjct: 450 GMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSP 509
Query: 299 DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRIL 358
D +Y +ISGLC+ +A+ + +++ +++ Y +L+ K + +L
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Query: 359 SLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
+ M EG P +N+L+ + + +D+ +++++M + G P Y +I C
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC-- 627
Query: 419 EDLPSMDVLELAETAYSEM-LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGF 477
S+ L+ A + +M L V N V + +G F +A ++ EM K
Sbjct: 628 ----SVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Query: 478 IPDIGTYS 485
P++ TY+
Sbjct: 684 RPNVETYN 691
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 7/164 (4%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N+LI +C E L ++ G K +TYN L+ F + + ++ + +M
Sbjct: 550 NMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRE 609
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE----KEEFVPDTILYTKMISGLCEASLFE 317
G T G + C G+ +AL L + + P+T++Y +I+ + F
Sbjct: 610 DGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFG 669
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLM 361
+A+ M+ PNV TY L CL +K G +L LM
Sbjct: 670 QALSLKEEMKMKMVRPNVETYNALF-KCLNEKTQGET--LLKLM 710
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 10/208 (4%)
Query: 236 YNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLC---KAGKWRDALTLIE 292
Y AL+ + + A V ++ G+S+D C A K + LT +E
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 293 KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLG 352
KE PD+I Y +IS + FE + +MR + P V TY ++ +L
Sbjct: 574 KEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELD 633
Query: 353 RCKRILSLM-IMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
++ M + P+ I+N L++A+ + ++ A L ++M +P YN L
Sbjct: 634 EALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Query: 412 IGGICGNEDLPSMDVLELAETAYSEMLE 439
C NE +L+L + EM+E
Sbjct: 694 FK--CLNEKTQGETLLKLMD----EMVE 715
>AT1G08610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2733788-2735467 REVERSE
Length = 559
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 133/312 (42%), Gaps = 18/312 (5%)
Query: 183 EQFLREIKDEDKE------VLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTY 236
EQ +R KD+ + + +L L+ +YC + A+E L + G +TY
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSA---RAIEVLEDMAVEGCYPDIVTY 282
Query: 237 NALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKW---RDALTLIEK 293
N+LV R L+ V + + + G +++ T HSLC W + L ++ +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 294 EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGR 353
+ P I Y +I+GLC+A L A+DF +M C+P++VTY +L ++ +
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402
Query: 354 CKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIG 413
+L L+ C P +NS++ + A +L +M+ G P + LI
Sbjct: 403 AIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIY 462
Query: 414 GICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMM 473
G C +++E A E G + + LC + E A V+ M+
Sbjct: 463 GFC------RANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIML 516
Query: 474 SKGFIPDIGTYS 485
+ G PD Y+
Sbjct: 517 TGGCKPDETIYT 528
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 130/300 (43%), Gaps = 13/300 (4%)
Query: 189 IKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEK 248
I + D+E ++L+ L C NG A + + + + + LV R ++
Sbjct: 99 ITENDEETNNEILHNL----CSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQ 154
Query: 249 LDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV---PDTILYTK 305
LD A + R M G D+ T +LCK G R AL L+E PD I Y
Sbjct: 155 LDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNT 214
Query: 306 MISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEG 365
+I + + E+A+ F N C P ++TY +L+ R R +L M +EG
Sbjct: 215 VIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEG 274
Query: 366 CFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMD 425
C+P +NSLV+ CR + +++ ++ G + V YN L+ +C +E +
Sbjct: 275 CYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWD--E 332
Query: 426 VLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
V E+ Y V+ + ++ LC +A + +M+ + +PDI TY+
Sbjct: 333 VEEILNIMYQTSYCPTVITYNILING----LCKARLLSRAIDFFYQMLEQKCLPDIVTYN 388
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 3/179 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N+LI C+ L + A++ ++ + +TYN ++ + +D A + + N
Sbjct: 353 NILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKN 412
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
T L K G + AL L + PD I +I G C A+L EE
Sbjct: 413 TCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEE 472
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
A L TYR+++ G +KK++ ++ +M+ GC P I+ ++V
Sbjct: 473 AGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIV 531
>AT1G52640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19608857-19610428 REVERSE
Length = 523
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 156/410 (38%), Gaps = 88/410 (21%)
Query: 118 LRQFREKLSESLVAEVLNLVKNPELGI---KFFIWAGRQIGYSHTQAVYNALLEMIESTN 174
L + ++S +LV +VL KN LG +FF+WA R ++H+ Y+ L+E++ S+
Sbjct: 59 LVAYSPRVSSNLVEQVLKRCKN--LGFPAHRFFLWARRIPDFAHSLESYHILVEILGSSK 116
Query: 175 NNSNDRIPEQFLREIKDEDK-EVLGKLLNVLIRKY------------------------- 208
+ + FL E ++ + E+ K+ ++ R Y
Sbjct: 117 QFA---LLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCV 173
Query: 209 ----------CQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
C N A E G+ K FG S TY+ LV + R A V E
Sbjct: 174 DDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDE 233
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLCEASL 315
M +D +LCK+G + ++ PD + I C+A
Sbjct: 234 MLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGD 293
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
A L+RM+ +PNV T+ ++ + +++ +L MI +G P +NS
Sbjct: 294 VHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNS 353
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYS 435
++ +C + + A KLL +M + C P YN+++
Sbjct: 354 IMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVL----------------------- 390
Query: 436 EMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ L +G+F++A + M + F P + TY+
Sbjct: 391 ------------------KLLIRIGRFDRATEIWEGMSERKFYPTVATYT 422
>AT5G47360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19214445-19215878 REVERSE
Length = 477
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 162/381 (42%), Gaps = 52/381 (13%)
Query: 109 GFGSKTQKFLRQFREKLSESLVAEVLNLVKNPEL--GIKFFIWAGRQIGYSHTQAVYNAL 166
G S +K L +L S + EVL + G++FFIWAG + H+ +Y
Sbjct: 42 GCTSNLEKELASANVQLDSSCINEVLRRCDPNQFQSGLRFFIWAGTLSSHRHSAYMYTKA 101
Query: 167 LEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKD 226
++++ + + + + + E+ V K + +++ Q L + AL L + +
Sbjct: 102 CDILKI---RAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPE 158
Query: 227 FGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRD 286
F A + YN ++ +F L+ A ++ +EM +G D T + C AGK D
Sbjct: 159 FNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDD 218
Query: 287 ALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANS----CIPNVVTYR 339
A L + K + V +++ Y++++ G+C++ E A++ L M PN VTY
Sbjct: 219 AWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYT 278
Query: 340 ILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKC 399
+++ A+C R A +L +M
Sbjct: 279 LVI-----------------------------------QAFCEKRRVEEALLVLDRMGNR 303
Query: 400 GCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGV 459
GC P V +LI G+ N++ DV L++ +++++G V S+ L +
Sbjct: 304 GCMPNRVTACVLIQGVLENDE----DVKALSKL-IDKLVKLGGVSLSECFSSATVSLIRM 358
Query: 460 GKFEKAFNVIREMMSKGFIPD 480
++E+A + R M+ +G PD
Sbjct: 359 KRWEEAEKIFRLMLVRGVRPD 379
>AT1G11710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3948886-3950859 FORWARD
Length = 657
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 162/390 (41%), Gaps = 32/390 (8%)
Query: 118 LRQFREKLSESLVAEVLNLVKN-PELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNN 176
L QF L+ L++ VL ++ P+L ++F+ W R + ++ + A MI +
Sbjct: 48 LHQFSSSLTNPLISRVLREFRSSPKLALEFYNWVLRSNTVAKSENRFEASCVMIHLLVGS 107
Query: 177 SNDRIPEQFLREIKDEDKEVLGKL--LNVLIRKY-----------------CQNGLWNAA 217
+ + + E L L L+ LIR Y QNG A
Sbjct: 108 RRFDDALSIMANLMSVEGEKLSPLHVLSGLIRSYQACGSSPDVFDSLVRACTQNGDAQGA 167
Query: 218 LEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHS 277
E + + + G+ S N + L ++D + V++EM +LGY + T +S
Sbjct: 168 YEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYS 227
Query: 278 LCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNR---MRANSC 331
CK K +AL++ + K P+ + + MI G C+ A+ L + M N
Sbjct: 228 FCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFV 287
Query: 332 IPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYK 391
PN VTY ++ G + +L +RI M+ G + + +LV AY R+ A +
Sbjct: 288 SPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALR 347
Query: 392 LLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSN 451
L +M G V+YN ++ + D +E A + +M + +++ +
Sbjct: 348 LCDEMTSKGLVVNTVIYNSIVYWLFMEGD------IEGAMSVLRDMNSKNMQIDRFTQAI 401
Query: 452 FARCLCGVGKFEKAFNVIREMMSKGFIPDI 481
R LC G ++A R++ K + DI
Sbjct: 402 VVRGLCRNGYVKEAVEFQRQISEKKLVEDI 431
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 131/316 (41%), Gaps = 36/316 (11%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N +I +C+ G + A G + G + TY ALV + RA D A + EM++
Sbjct: 295 NSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTS 354
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
G +++ + L G A++++ + D ++ GLC +E
Sbjct: 355 KGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKE 414
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A++F ++ + ++V + L+ +R K+L +IL M+++G F +L+
Sbjct: 415 AVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLID 474
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICG--------------------- 417
Y + A ++ M+K V+YN ++ G+
Sbjct: 475 GYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVT 534
Query: 418 -----NEDLPSMDVLELAETAYSEML----EVGVVLNKVNVSNFARCLCGVGKFEKAFNV 468
NE L + +V E A+ S+M E V L N+ LC G +EKA V
Sbjct: 535 YNTLLNESLKTGNV-EEADDILSKMQKQDGEKSVSLVTFNI--MINHLCKFGSYEKAKEV 591
Query: 469 IREMMSKGFIPDIGTY 484
++ M+ +G +PD TY
Sbjct: 592 LKFMVERGVVPDSITY 607
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 9/232 (3%)
Query: 186 LREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLR 245
LR++ ++ ++ +++R C+NG A+E ++ + + +N L+ F+R
Sbjct: 384 LRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVR 443
Query: 246 AEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTIL 302
+KL A + M G S+D+ + G K GK AL + + K + ++
Sbjct: 444 DKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVI 503
Query: 303 YTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMI 362
Y +++GL + + A +N M I ++VTY LL L+ + ILS M
Sbjct: 504 YNSIVNGLSKRGMAGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQ 559
Query: 363 MEGCFPSPGI--FNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILI 412
+ S + FN +++ C+ Y A ++LK MV+ G P + Y LI
Sbjct: 560 KQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLI 611
>AT1G74900.1 | Symbols: OTP43 | OTP43 (organelle transcript
processing defect 43) | chr1:28133933-28135381 FORWARD
Length = 453
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 3/217 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
NV++ +C ALE L + + G + TYN ++ F RA ++ A+ EM
Sbjct: 199 NVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKK 258
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
+D T H AG+ + A + + +E +P Y MI LC+ E
Sbjct: 259 RDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVEN 318
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ M PNV TY +L+ G + R + ++ M EGC P+ +N ++
Sbjct: 319 AVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIR 378
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
Y + A L +KM C P YNILI G+
Sbjct: 379 YYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 130/290 (44%), Gaps = 10/290 (3%)
Query: 199 KLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
K ++ +Y G + A++ + + G ++N ++ V ++++++ AY + R
Sbjct: 127 KTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRA 186
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASL 315
+ +S+D+ T + C + AL ++++ P+ Y M+ G A
Sbjct: 187 LRG-RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ 245
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
A +F M+ C +VVTY ++ G ++ R + + MI EG PS +N+
Sbjct: 246 IRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNA 305
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYS 435
++ C+ + A + ++MV+ G +P YN+LI G+ + + EL + +
Sbjct: 306 MIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE--ELMQRMEN 363
Query: 436 EMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
E E + + ++ C + EKA + +M S +P++ TY+
Sbjct: 364 EGCEPNFQTYNMMIRYYSEC----SEVEKALGLFEKMGSGDCLPNLDTYN 409
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 3/170 (1%)
Query: 184 QFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF 243
+F E+K D E+ ++ + G A + G S TYNA++ V
Sbjct: 251 EFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVL 310
Query: 244 LRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKW---RDALTLIEKEEFVPDT 300
+ + ++ A ++ EM GY + T L AG++ + + +E E P+
Sbjct: 311 CKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNF 370
Query: 301 ILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQ 350
Y MI E S E+A+ +M + C+PN+ TY IL+ G +K+
Sbjct: 371 QTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKR 420
>AT2G02150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:547389-552229 REVERSE
Length = 1141
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 111/252 (44%), Gaps = 9/252 (3%)
Query: 224 LKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGK 283
+KD + +TYNAL+ F + KL +REM G + + + CK G
Sbjct: 191 MKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGM 250
Query: 284 WRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRI 340
+ A+ + + VP+ YT +I C+ +A N M NVVTY
Sbjct: 251 MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTA 310
Query: 341 LLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCG 400
L+ G +++ + + M G P+ +N+L+H + ++++ A +LL ++ G
Sbjct: 311 LIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG 370
Query: 401 CQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVG 460
+P ++Y I G+C S++ +E A+ +EM E G+ N + + G
Sbjct: 371 IKPDLLLYGTFIWGLC------SLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSG 424
Query: 461 KFEKAFNVIREM 472
+ +++ EM
Sbjct: 425 NPTEGLHLLDEM 436
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 112/260 (43%), Gaps = 9/260 (3%)
Query: 228 GYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA 287
G + + TYN ++ + ++ A + EM G D+ T K G+ D
Sbjct: 125 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 184
Query: 288 LTLIEKEEFV---PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCG 344
+ E+ + + PD I Y +I+ C+ ++F M+ N PNVV+Y L+
Sbjct: 185 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 244
Query: 345 CLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPG 404
++ + + + M G P+ + SL+ A C+ + S A++L +M++ G +
Sbjct: 245 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 304
Query: 405 YVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEK 464
V Y LI G+C E + AE + +M GV+ N + + ++
Sbjct: 305 VVTYTALIDGLCDAERMKE------AEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 358
Query: 465 AFNVIREMMSKGFIPDIGTY 484
A ++ E+ +G PD+ Y
Sbjct: 359 ALELLNELKGRGIKPDLLLY 378
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 136/340 (40%), Gaps = 45/340 (13%)
Query: 185 FLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFL 244
F E+KD E N LI +C+ G LE +K G K + ++Y+ LV F
Sbjct: 187 FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC 246
Query: 245 RAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVP---DTI 301
+ + A + +M +G + +T + CK G DA L + V + +
Sbjct: 247 KEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVV 306
Query: 302 LYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLM 361
YT +I GLC+A +EA + +M IPN+ +Y L+ G ++ K + R +L+ +
Sbjct: 307 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 366
Query: 362 IMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYN------------ 409
G P ++ + + C A ++ +M +CG + ++Y
Sbjct: 367 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 426
Query: 410 -----------------------ILIGGICGNEDLPSMDVLELAETAYSEML-EVGVVLN 445
+LI G+C N+ ++ A ++ + + G+ N
Sbjct: 427 TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK------LVSKAVDYFNRISNDFGLQAN 480
Query: 446 KVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ LC + E A + +M+ KG +PD Y+
Sbjct: 481 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYT 520
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 154/350 (44%), Gaps = 26/350 (7%)
Query: 141 ELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSND-RIPEQFLREIKDEDKEVLGK 199
+ IKF++ R++G + Y +L++ N S+ R+ + L+ +G
Sbjct: 252 QQAIKFYVDM-RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ---------VGV 301
Query: 200 LLNVLIRKYCQNGLWNA-----ALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYL 254
NV+ +GL +A A E G++ G + +YNAL+ F++A+ +D A
Sbjct: 302 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 361
Query: 255 VHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLC 311
+ E+ G D G F LC K A ++ + + ++++YT ++
Sbjct: 362 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 421
Query: 312 EASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIME-GCFPSP 370
++ E + L+ M+ VVT+ +L+ G + K + + + + + G +
Sbjct: 422 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 481
Query: 371 GIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELA 430
IF +++ C+ A L ++MV+ G P Y L+ G + +VLE A
Sbjct: 482 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG-----NFKQGNVLE-A 535
Query: 431 ETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
+M E+G+ L+ + ++ L + +KA + + EM+ +G PD
Sbjct: 536 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 585
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 10/191 (5%)
Query: 297 VPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKR 356
VP ++ + S L + + EEA+ ++M+ P + LL + + KR
Sbjct: 57 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 116
Query: 357 ILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC 416
MI G P+ +N ++ C+ D A L ++M G P V YN +I G
Sbjct: 117 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 176
Query: 417 GNEDLPSMDVLELAETA--YSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMS 474
V L +T + EM ++ + + + C C GK REM
Sbjct: 177 --------KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 228
Query: 475 KGFIPDIGTYS 485
G P++ +YS
Sbjct: 229 NGLKPNVVSYS 239
>AT1G31840.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23098 Blast hits to 5773 proteins in 180 species: Archae
- 3; Bacteria - 16; Metazoa - 407; Fungi - 450; Plants -
21304; Viruses - 0; Other Eukaryotes - 918 (source: NCBI
BLink). | chr1:11424006-11426528 FORWARD
Length = 840
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 126/289 (43%), Gaps = 9/289 (3%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ N LI +C+ ++ AL+ + +G K T+ ++ V + +L+ A + M
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLF 316
+G D+ + CK K L L +++ + D + +I L +
Sbjct: 558 FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRI 617
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
E+A F N + P++VTY ++CG ++L +RI L+ + P+ L
Sbjct: 618 EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
+H C++ D A ++ M + G +P V Y L+ + D+ E + + E
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI------EGSFKLFEE 731
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
M E G+ + V+ S LC G+ ++A N+ + + +PD+ Y+
Sbjct: 732 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYA 780
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 6/188 (3%)
Query: 298 PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRI 357
P+ + + +I+G C+ + A D M P+++ Y L+ G + LG ++
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 358 LSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICG 417
S + +G +F+S + Y +S D + A + K+M+ G P V Y ILI G+C
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 418 NEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGF 477
+ + A Y ++L+ G+ + V S+ C G F + +M+ G+
Sbjct: 404 DGRIYE------AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 478 IPDIGTYS 485
PD+ Y
Sbjct: 458 PPDVVIYG 465
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 113/284 (39%), Gaps = 11/284 (3%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
++R G AL R+ G + L Y L+ F + K + M
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ 593
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDAL----TLIEKEEFVPDTILYTKMISGLCEASLF 316
S D H L K + DA LIE + PD + Y MI G C
Sbjct: 594 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK-MEPDIVTYNTMICGYCSLRRL 652
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
+EA ++ PN VT IL+ + + R+ S+M +G P+ + L
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 712
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
+ + +S D ++KL ++M + G P V Y+I+I G+C ++ A + +
Sbjct: 713 MDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGR------VDEATNIFHQ 766
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
++ ++ + V + R C VG+ +A + M+ G PD
Sbjct: 767 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 112/264 (42%), Gaps = 11/264 (4%)
Query: 226 DFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWR 285
D G + +T+ L+ F + ++D A+ + + M G D KAG
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338
Query: 286 DALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILL 342
L + + D ++++ I ++ A RM PNVVTY IL+
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILI 398
Query: 343 CGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQ 402
G + ++ + ++ G PS ++SL+ +C+ + + L + M+K G
Sbjct: 399 KGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP 458
Query: 403 PGYVVYNILIGGICGNEDLPSMDVLELAETAYS-EMLEVGVVLNKVNVSNFARCLCGVGK 461
P V+Y +L+ G+ S L L +S +ML + LN V ++ C + +
Sbjct: 459 PDVVIYGVLVDGL-------SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Query: 462 FEKAFNVIREMMSKGFIPDIGTYS 485
F++A V R M G PD+ T++
Sbjct: 512 FDEALKVFRLMGIYGIKPDVATFT 535
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 122/322 (37%), Gaps = 44/322 (13%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
+LI+ CQ+G A G++ G + S +TY++L+ F + L + + ++ +M
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
+GY D G L K G A+ K + + +++ +I G C + F+E
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ M P+V T+ ++ + + +L + M G P + +L+
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
Query: 379 AYCR-------------------SRDYSY----------------AYKLLKKMVKCGCQP 403
A+C+ S D + A K +++ +P
Sbjct: 575 AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 634
Query: 404 GYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFE 463
V YN +I G C S+ L+ AE + + N V ++ LC +
Sbjct: 635 DIVTYNTMICGYC------SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 688
Query: 464 KAFNVIREMMSKGFIPDIGTYS 485
A + M KG P+ TY
Sbjct: 689 GAIRMFSIMAEKGSKPNAVTYG 710
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 11/170 (6%)
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGI--FNS 375
+A+DF + +V+ +L G L Q+ R+LSL++ C P+P + F +
Sbjct: 235 KALDFHRLVMERGFRVGIVSCNKVLKG-LSVDQIEVASRLLSLVL--DCGPAPNVVTFCT 291
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYS 435
L++ +C+ + A+ L K M + G +P + Y+ LI G +L + +S
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF------KAGMLGMGHKLFS 345
Query: 436 EMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ L GV L+ V S+ G A V + M+ +G P++ TY+
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYT 395
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 3/144 (2%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
L +LI C+N + A+ + + G K + +TY L+ F ++ ++ ++ + EM
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFE 317
G S + LCK G+ +A + + + +PD + Y +I G C+
Sbjct: 734 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 793
Query: 318 EAMDFLNRMRANSCIPNVVTYRIL 341
EA M N P+ + R L
Sbjct: 794 EAALLYEHMLRNGVKPDDLLQRAL 817
>AT3G62470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23106600-23108399 REVERSE
Length = 599
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 170/409 (41%), Gaps = 46/409 (11%)
Query: 115 QKFLRQFREKLSESLVAEVLNLVKNP-ELGIKFFIWAGRQIGYSHTQAVYNALLEMIEST 173
+ L + + LS L+ EVL ++ + +FF WA + G++H YN+++ ++ T
Sbjct: 149 EAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKT 208
Query: 174 NN------------NSNDRIPEQFLREIK-----DEDKEVLGKLLNVLIRKY-CQNGL-- 213
E F +K E K+ +G + L++KY + G+
Sbjct: 209 RQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVG--IFELMKKYKFKIGVET 266
Query: 214 WNAALEELGRLKDFGYKASRL-------------TYNALVIVFLRAEKLDTAYLVHREMS 260
N L+ LGR K G +A L TY L+ + R L A + +M
Sbjct: 267 INCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI 325
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFE 317
+ G D L ++ K DA+ L ++ + P+ YT MI C+ S E
Sbjct: 326 DQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSME 385
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
A+++ + M + P+ Y L+ G +K+L +L M +G P +N+L+
Sbjct: 386 TAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
+ +A ++ KM++ +P +N+++ + E+ + EM
Sbjct: 446 KLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNY------EMGRAVWEEM 499
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYSK 486
++ G+ + + + R L G GK +A + EM+ KG + Y+K
Sbjct: 500 IKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNK 548
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 97/244 (39%), Gaps = 16/244 (6%)
Query: 213 LWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLG 272
+WN + D G K + +N ++ LR+ K A + M + G + +
Sbjct: 320 IWNDMI-------DQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYT 372
Query: 273 CFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRAN 329
CK A+ + PD +YT +I+G + + L M+
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 432
Query: 330 SCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYA 389
P+ TY L+ +K RI + MI PS FN ++ +Y +R+Y
Sbjct: 433 GHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMG 492
Query: 390 YKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNV 449
+ ++M+K G P Y +LI G+ G + S + E EML+ G+ ++
Sbjct: 493 RAVWEEMIKKGICPDDNSYTVLIRGLIG--EGKSREACRYLE----EMLDKGMKTPLIDY 546
Query: 450 SNFA 453
+ FA
Sbjct: 547 NKFA 550
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD
Length = 952
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 121/287 (42%), Gaps = 6/287 (2%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
N LI + A+E L + G A+ TY ++ + A+ +
Sbjct: 627 FNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 686
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK--EEFVP-DTILYTKMISGLCEASLFE 317
N G +D FT + CK+G+ + AL + ++ +P ++ +Y +I G
Sbjct: 687 NEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVW 746
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
EA D + +M+ P++ TY + C + + R + + M G P+ + +L+
Sbjct: 747 EAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
+ R+ A ++M G +P VY+ L+ + + + T EM
Sbjct: 807 KGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEM 866
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+E G++++ ++++CLC K E + + E + K F PD ++
Sbjct: 867 VEAGLIVDMGTAVHWSKCLC---KIEASGGELTETLQKTFPPDWSSH 910
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 117/296 (39%), Gaps = 9/296 (3%)
Query: 183 EQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIV 242
E +RE+++E + + + ++ Y L RLK+ G+ + +TY L+ +
Sbjct: 434 EALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 243 FLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPD 299
+ + K+ A V R M G + T + K W +A + E KE PD
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553
Query: 300 TILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILS 359
ILY +IS C + A+ + M+ P T+ ++ G + + R +
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613
Query: 360 LMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNE 419
+M GC P+ FN L++ R A ++L +M G Y ++ G
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 673
Query: 420 DLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSK 475
D A ++ + G+ ++ + C G+ + A V +EM ++
Sbjct: 674 DTGK------AFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR 723
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 124/309 (40%), Gaps = 15/309 (4%)
Query: 184 QFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF 243
Q ++E++ + +I Y ++G +LE ++ G + T+N L+
Sbjct: 575 QTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGL 634
Query: 244 LRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAH---SLCKAGKWRDALTLIEKEEFVPDT 300
+ +++ A + EM+ G S + T S+ GK + T ++ E D
Sbjct: 635 VEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDI 694
Query: 301 ILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSL 360
Y ++ C++ + A+ M A + N Y IL+ G R+ + ++
Sbjct: 695 FTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQ 754
Query: 361 MIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNED 420
M EG P + S + A ++ D + A + +++M G +P Y LI G
Sbjct: 755 MKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKG-WARAS 813
Query: 421 LPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAF------NVIREMMS 474
LP E A + Y EM +G+ +K L +A+ + +EM+
Sbjct: 814 LP-----EKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVE 868
Query: 475 KGFIPDIGT 483
G I D+GT
Sbjct: 869 AGLIVDMGT 877
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 120/300 (40%), Gaps = 24/300 (8%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
++++ Y + G + A E R++ G + Y +L+ + +D A R+M
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTI---LYTKMISGLCEASLFE 317
G M T KAG A ++ + + T+ +Y K+I C+ E
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 431
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCL----RKKQLGRCKRILSLMIMEGCFPSPGIF 373
A + M + Y ++ G KK L KR+ G P+ +
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKEC----GFTPTVVTY 487
Query: 374 NSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETA 433
L++ Y + S A ++ + M + G + Y+++I G +D + A
Sbjct: 488 GCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWAN------AFAV 541
Query: 434 YSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMM-------SKGFIPDIGTYSK 486
+ +M++ G+ + + +N CG+G ++A ++EM ++ F+P I Y+K
Sbjct: 542 FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAK 601
>AT3G16010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5434142-5436244 FORWARD
Length = 642
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 158/383 (41%), Gaps = 19/383 (4%)
Query: 110 FGSKTQKFLRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEM 169
+G +K L + K+ LV +L + + I+FF WAG++ + H + Y L+
Sbjct: 76 WGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRC 135
Query: 170 IESTNNNSNDRIPEQFLREIKDEDK----EVLGKLLNVLIRKYCQNGLWNAALEELGRLK 225
+E R+ + R I++ + V +L+ L++ + + + AL + K
Sbjct: 136 LEEA------RLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAK 189
Query: 226 DFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSM-DSFTLGCFAHSLCKAGKW 284
K + TYN+++++ ++ + + + V+ EM N G D+ T S K G+
Sbjct: 190 GRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRN 249
Query: 285 RDALTLIEKEE---FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRIL 341
A+ L ++ + P +YT ++ + E+A+D M+ C P V TY L
Sbjct: 250 DSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTEL 309
Query: 342 LCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGC 401
+ G + ++ M+ +G P N+L++ + + +M C
Sbjct: 310 IKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRC 369
Query: 402 QPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGK 461
P V YN +I + S + + + +M V ++ S C +
Sbjct: 370 TPTVVSYNTVIKAL-----FESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNR 424
Query: 462 FEKAFNVIREMMSKGFIPDIGTY 484
EKA ++ EM KGF P Y
Sbjct: 425 VEKALLLLEEMDEKGFPPCPAAY 447
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 154/392 (39%), Gaps = 71/392 (18%)
Query: 162 VYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEEL 221
Y+AL+ E N + + E+KD + K+ L+ Y + G AL+
Sbjct: 235 TYSALISSYEKLGRNDS---AIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 222 GRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKA 281
+K G + TY L+ +A ++D AY +++M G + D L + L K
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 282 GKWRDALTLIEKEEF---VPDTILYTKMISGLCEA-SLFEEAMDFLNRMRANSCIPNVVT 337
G+ + + + P + Y +I L E+ + E + ++M+A+S P+ T
Sbjct: 352 GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFT 411
Query: 338 YRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMV 397
Y IL+ G + ++ + +L M +G P P + SL++A +++ Y A +L K++
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELK 471
Query: 398 -------------------KC----------------GCQPGYVVYNILIGGICG----N 418
KC G P YN L+ G+ N
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMIN 531
Query: 419 E---------------DLPSMDVL--ELAETAYS----EMLEV----GVVLNKVNVSNFA 453
E D+ S +++ A T EM E G+ + V +
Sbjct: 532 EANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLL 591
Query: 454 RCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
C G FE+A ++REM KGF D TYS
Sbjct: 592 GCFAHAGMFEEAARMMREMKDKGFEYDAITYS 623
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 101/228 (44%), Gaps = 4/228 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
++LI YC+ AL L + + G+ Y +L+ +A++ + A + +E+
Sbjct: 413 SILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKE 472
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
++ S K GK +A+ L ++ + PD Y ++SG+ +A + E
Sbjct: 473 NFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINE 532
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A L +M N C ++ ++ I+L G R R + + G P +N+L+
Sbjct: 533 ANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLG 592
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDV 426
+ + + A +++++M G + + Y+ ++ + GN D DV
Sbjct: 593 CFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV-GNVDHEKDDV 639
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 72/162 (44%), Gaps = 3/162 (1%)
Query: 184 QFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF 243
+ +E+K+ V ++ V+I+ + + G + A++ +K+ G YNAL+
Sbjct: 465 ELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM 524
Query: 244 LRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDT 300
++A ++ A + R+M G D + + + G R A+ + I+ PD
Sbjct: 525 VKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDG 584
Query: 301 ILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILL 342
+ Y ++ A +FEEA + M+ + +TY +L
Sbjct: 585 VTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
>AT4G28010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:13930379-13932493 FORWARD
Length = 704
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 103/233 (44%), Gaps = 5/233 (2%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N+L++ C+N A+ L ++ +YN ++ F ++L+ A + EM
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV---PDTILYTKMISGLCEASLFEE 318
G S T G + CKAGK +A+ +++ +F+ D ++YT +I G C+ +
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
+ + P +TY L+ G + QL I MI G P+ + L+
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAE 431
C A +LL M++ +P V YNI+I +C +D D +E+ E
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLC--KDGLVADAVEIVE 376
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 12/244 (4%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N +IR +C+ ALE +K G S +T+ L+ F +A K+D A +EM
Sbjct: 181 NTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKF 240
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
+G D C G+ L ++ P I Y +I G C+ +E
Sbjct: 241 MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKE 300
Query: 319 AMDFLNRMRANSCIPNVVTYRIL---LCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
A + M PNV TY L LCG + K+ ++L+LMI + P+ +N
Sbjct: 301 ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE---ALQLLNLMIEKDEEPNAVTYNI 357
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMD---VLELAET 432
+++ C+ + A ++++ M K +P + YNIL+GG+C DL L L ++
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 433 AYSE 436
+Y++
Sbjct: 418 SYTD 421
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 112/255 (43%), Gaps = 9/255 (3%)
Query: 234 LTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCK---AGKWRDALTL 290
++ + L+ +++ K A+ V M G++ + + LC+ GK L
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE 167
Query: 291 IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQ 350
+ + +PD Y +I G CE E+A++ N M+ + C ++VT+ IL+ + +
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 351 LGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNI 410
+ L M G ++ SL+ +C + L ++++ G P + YN
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNT 287
Query: 411 LIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIR 470
LI G C + L+ A + M+E GV N + LCGVGK ++A ++
Sbjct: 288 LIRGFC------KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLN 341
Query: 471 EMMSKGFIPDIGTYS 485
M+ K P+ TY+
Sbjct: 342 LMIEKDEEPNAVTYN 356
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 132/307 (42%), Gaps = 13/307 (4%)
Query: 185 FLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFL 244
FL+E+K E + LIR +C G + + + G +TYN L+ F
Sbjct: 234 FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293
Query: 245 RAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL----IEKEEFVPDT 300
+ +L A + M G + +T LC GK ++AL L IEK+E P+
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE-EPNA 352
Query: 301 ILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSL 360
+ Y +I+ LC+ L +A++ + M+ P+ +TY ILL G K L ++L L
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 361 MIMEGCFPSPGI--FNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
M+ + + P + +N+L+H C+ A + +V+ V NIL+ N
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILL-----N 467
Query: 419 EDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFI 478
L + DV + E + ++ + +V N + C G A ++ +M
Sbjct: 468 STLKAGDVNKAMEL-WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQ 526
Query: 479 PDIGTYS 485
P + Y+
Sbjct: 527 PSVFDYN 533
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 131/303 (43%), Gaps = 13/303 (4%)
Query: 184 QFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF 243
Q L + ++D+E N++I K C++GL A+E + +K + +TYN L+
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 244 LRAEKLDTAY-LVHREMSNLGYS-MDSFTLGCFAHSLCKAGKWRDALT----LIEKEEFV 297
LD A L++ + + Y+ D + H LCK + AL L+EK
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG-A 456
Query: 298 PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRI 357
D + +++ +A +AM+ ++ + + N TY ++ G + L K +
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516
Query: 358 LSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICG 417
L M + PS +N L+ + C+ A++L ++M + P V +NI+I G
Sbjct: 517 LCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLK 576
Query: 418 NEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGF 477
D+ S AE+ M G+ + S +G ++A + +M+ GF
Sbjct: 577 AGDIKS------AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGF 630
Query: 478 IPD 480
PD
Sbjct: 631 EPD 633
>AT1G77360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29071983-29073428 REVERSE
Length = 481
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 153/365 (41%), Gaps = 49/365 (13%)
Query: 124 KLSESLVAEVLNLVKNPEL-GIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIP 182
++S+ +V +VLN +N L +FF W+ +Q Y H+ Y+ MIEST
Sbjct: 61 RVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHM---MIESTAK------- 110
Query: 183 EQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIV 242
+R+ K ++ L+N + +K N +E T+ ++
Sbjct: 111 ---IRQYK-----LMWDLINAMRKKKMLN------VE---------------TFCIVMRK 141
Query: 243 FLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE--KEEFVPDT 300
+ RA+K+D A M + +LCK+ R A + E ++ F PD+
Sbjct: 142 YARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDS 201
Query: 301 ILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSL 360
Y+ ++ G + +A + M C P++VTY I++ + ++ I+
Sbjct: 202 KTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRS 261
Query: 361 MIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNED 420
M C P+ I++ LVH Y A +M + G + V+N LIG C
Sbjct: 262 MDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANR 321
Query: 421 LPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
+ ++ EM GV N + + R L G+ ++AF+V R+M+ K PD
Sbjct: 322 MKNV------YRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPD 374
Query: 481 IGTYS 485
TY+
Sbjct: 375 ADTYT 379
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 93/213 (43%), Gaps = 4/213 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
++++ C+ G + AL + + K + Y+ LV + +L+ A EM
Sbjct: 240 SIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMER 299
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLCEASLFEE 318
G D + CKA + ++ ++++ + P++ ++ L E +E
Sbjct: 300 SGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDE 359
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A D +M C P+ TY +++ KK++ ++ M +G FPS F+ L++
Sbjct: 360 AFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLIN 418
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
C R A LL++M++ G +P V + L
Sbjct: 419 GLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 451
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 2/179 (1%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ +VL+ Y A++ ++ G KA +N+L+ F +A ++ Y V +EM
Sbjct: 273 IYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 332
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV--PDTILYTKMISGLCEASLFE 317
+ G + +S + L + G+ +A + K V PD YT +I CE E
Sbjct: 333 KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEME 392
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
A MR P++ T+ +L+ G ++ + +L MI G PS F L
Sbjct: 393 TADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 451
>AT4G01570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:679487-681904 FORWARD
Length = 805
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 126/285 (44%), Gaps = 24/285 (8%)
Query: 215 NAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCF 274
N + ++ GR+ Y + N L++ RA+ V ++ M F +
Sbjct: 194 NHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKG----MKRFKFDTW 249
Query: 275 AHSLCKAGK--WRD---ALTLIEK---------EEFVPDTILYTKMISGLCEASLFEEAM 320
++++C G W D AL+L ++ F PD Y +I LC ++A+
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL 309
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
+ ++ + P+ TYRIL+ GC + ++ RI M G P ++N L+
Sbjct: 310 IVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGT 369
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEV 440
++R + A +L +KMV+ G + YNILI G+ N E T + ++ +
Sbjct: 370 LKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRN------GRAEAGFTLFCDLKKK 423
Query: 441 GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
G ++ + S LC GK E A ++ EM ++GF D+ T S
Sbjct: 424 GQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTIS 468
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 76/179 (42%), Gaps = 4/179 (2%)
Query: 237 NALVIVFLRAEKLDTAYLVHREMSNLGYS-MDSFTLGCFAHSLCKAGKWRDALTLIEK-- 293
N + ++L L A + + +G + + S+T S K G ++ A ++++
Sbjct: 598 NTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMF 657
Query: 294 EEF-VPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLG 352
E F D Y +I GL + + A L+R+ ++V Y L+ + +L
Sbjct: 658 ENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLD 717
Query: 353 RCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
++ M G P +N+++ ++ AYK LK M+ GC P +V IL
Sbjct: 718 EATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
>AT5G11310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3606490-3608409 FORWARD
Length = 602
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 122/292 (41%), Gaps = 12/292 (4%)
Query: 199 KLLNVLIRKYCQNGLWNAA---LEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLV 255
+LL VL+ C+ G A LE +G D + S +N L+ + R+ KL A +
Sbjct: 213 RLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKL 272
Query: 256 HREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCE 312
EM + T G C+ + + A+ ++E+ E + +++ +I GL E
Sbjct: 273 WEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGE 332
Query: 313 ASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGI 372
A EA+ + R P +VTY L+ + L +IL +M+ G P+
Sbjct: 333 AGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTT 392
Query: 373 FNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAET 432
+N + + L K+++ G P + Y++++ +C ED L LA
Sbjct: 393 YNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLC--ED----GKLSLAMQ 446
Query: 433 AYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
EM G+ + + + LC + E+AF + +G IP T+
Sbjct: 447 VNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITF 498
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 87/183 (47%), Gaps = 9/183 (4%)
Query: 306 MISGLCEASLFEEAMDFLNRMRA---NSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMI 362
++ LC+ EA +L R+ ++ +P+V + ILL G R ++L + +++ M
Sbjct: 218 LLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMK 277
Query: 363 MEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLP 422
P+ + +L+ YCR R A ++L++M + ++V+N +I G+ L
Sbjct: 278 AMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLS 337
Query: 423 SMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIG 482
+ L + E + + E G + V ++ + C G A +++ MM++G P
Sbjct: 338 --EALGMMERFF--VCESGPTI--VTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTT 391
Query: 483 TYS 485
TY+
Sbjct: 392 TYN 394
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 3/163 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N L++ +C+ G A + L + G + TYN F + K + ++ ++
Sbjct: 359 NSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIE 418
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
G+S D T LC+ GK A+ + ++ PD + T +I LC + EE
Sbjct: 419 AGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEE 478
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLM 361
A + + IP +T++++ G K KR+ SLM
Sbjct: 479 AFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLM 521
>AT3G54980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20370293-20372848 FORWARD
Length = 851
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 137/313 (43%), Gaps = 32/313 (10%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
LI +C+N +AL +++ G + +T++ L+ F + +++ A +++M LG
Sbjct: 345 LITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLG 404
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIEK--EEFVPDTILYTKMISGLCEASLFEEAMD 321
+ F + K K +AL L ++ E + + + ++S LC+ +EA +
Sbjct: 405 LTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATE 464
Query: 322 FLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYC 381
L++M + PNVV+Y ++ G R+K + + + S ++ +G P+ ++ L+
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCF 524
Query: 382 RSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC-------GNEDLPSM---------- 424
R+ D A +++ M + VVY +I G+C E L +M
Sbjct: 525 RNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC 584
Query: 425 -------------DVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIRE 471
++ A AY EM G+ N + ++ LC + ++A + E
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 472 MMSKGFIPDIGTY 484
M +KG DI Y
Sbjct: 645 MKNKGVKLDIPAY 657
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 143/352 (40%), Gaps = 74/352 (21%)
Query: 169 MIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRL-KDF 227
+I+ N +++ + + + + EV G + +I C+ G + A E L + ++
Sbjct: 519 LIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEK 578
Query: 228 GYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA 287
S ++YN+++ F + ++D+A + EM G S
Sbjct: 579 RLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGIS---------------------- 616
Query: 288 LTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLR 347
P+ I YT +++GLC+ + ++A++ + M+ ++ Y L+ G +
Sbjct: 617 ----------PNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCK 666
Query: 348 KKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVV 407
+ + + S ++ EG PS I+NSL+ + + A L KKM+K G +
Sbjct: 667 RSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGT 726
Query: 408 YNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKF----- 462
Y LI G+ + +L LA Y+EM VG+V +++ + L G+F
Sbjct: 727 YTTLIDGLLKDGNLI------LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVK 780
Query: 463 ------------------------------EKAFNVIREMMSKGFIPDIGTY 484
++AF + EM+ KG +PD T+
Sbjct: 781 MFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 139/358 (38%), Gaps = 80/358 (22%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N ++ C+ G + A E L +++ G + ++YN +++ R + +D A +V +
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE 506
Query: 262 LGYSMDSFTL-----GCF------------------------------AHSLCKAG---K 283
G +++T GCF + LCK G K
Sbjct: 507 KGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSK 566
Query: 284 WRDALT-LIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILL 342
R+ L +IE++ + Y +I G + + A+ M N PNV+TY L+
Sbjct: 567 ARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLM 626
Query: 343 CGCLRKKQL---------------------------GRCKR--------ILSLMIMEGCF 367
G + ++ G CKR + S ++ EG
Sbjct: 627 NGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLN 686
Query: 368 PSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVL 427
PS I+NSL+ + + A L KKM+K G + Y LI G+ + +L
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLI----- 741
Query: 428 ELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
LA Y+EM VG+V +++ + L G+F K + EM P++ Y+
Sbjct: 742 -LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYN 798
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/427 (19%), Positives = 166/427 (38%), Gaps = 55/427 (12%)
Query: 112 SKTQKFLRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIE 171
SK + +K S++ +LN NPE ++F+ WA G V+ L+ ++
Sbjct: 58 SKVSLLSAKPEQKDDASVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILV 117
Query: 172 STNNNSNDRIPEQFLREIKDEDK--------------------EVLGKLLNVLIRKYCQN 211
S+ + R + +R + + EV + N L+ Y ++
Sbjct: 118 SSPE-TYGRASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKD 176
Query: 212 GLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTL 271
+ A++ + ++ + N + ++ L A ++ M +G D+ T
Sbjct: 177 RQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTT 236
Query: 272 GCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRA 328
+ + K +AL ++ + PD++LY+ + C+ A L M+
Sbjct: 237 QLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKE 296
Query: 329 NS-CIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYS 387
C+P+ TY ++ +++ + R+ M+ +G + SL+ +C++ D
Sbjct: 297 KKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLV 356
Query: 388 YAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDL-------PSMDVLELAETA------- 433
A L KM K G P V +++LI N ++ M+VL L +
Sbjct: 357 SALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTII 416
Query: 434 ---------------YSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFI 478
+ E E G+ N + LC GK ++A ++ +M S+G
Sbjct: 417 QGWLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIG 475
Query: 479 PDIGTYS 485
P++ +Y+
Sbjct: 476 PNVVSYN 482
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 3/218 (1%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
L+ C+N + ALE +K+ G K Y AL+ F + +++A + E+ G
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG 684
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAM 320
+ G AL L +K + D YT +I GL + A
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
+ M+A +P+ + Y +++ G +K Q + ++ M P+ I+N+++ +
Sbjct: 745 ELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGH 804
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
R + A++L +M+ G P ++IL+ G GN
Sbjct: 805 YREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGN 842
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 9/207 (4%)
Query: 178 NDRIPEQFLREIKDEDKEVLGKL----LNVLIRKYCQNGLWNAALEELGRLKDFGYKASR 233
N+R+ + E++DE K KL LI +C+ +A L + G S+
Sbjct: 632 NNRMDQAL--EMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQ 689
Query: 234 LTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKW---RDALTL 290
YN+L+ F + A ++++M G D T L K G + T
Sbjct: 690 PIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTE 749
Query: 291 IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQ 350
++ VPD I+YT +++GL + F + + M+ N+ PNV+ Y ++ G R+
Sbjct: 750 MQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGN 809
Query: 351 LGRCKRILSLMIMEGCFPSPGIFNSLV 377
L R+ M+ +G P F+ LV
Sbjct: 810 LDEAFRLHDEMLDKGILPDGATFDILV 836
>AT3G13150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4227975-4229630 REVERSE
Length = 551
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 128/287 (44%), Gaps = 15/287 (5%)
Query: 208 YCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM-SNLGYSM 266
Y +G+ A + + + + + ++NAL+ ++ ++KLD A +E+ LG +
Sbjct: 132 YGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITP 191
Query: 267 DSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFL 323
D T +LC+ G D L++ +EK F PD I + ++ LF E
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIW 251
Query: 324 NRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRS 383
+ M++ + PN+ +Y + G R K+ ++ +M EG P +N+L+ AY
Sbjct: 252 DLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVD 311
Query: 384 RDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVV 443
+ K +M + G P V Y +LI +C DL +E++E A L
Sbjct: 312 NNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDR--AVEVSEEAIKHKL----- 364
Query: 444 LNKVNV-SNFARCLCGVGKFEKAFNVIREMMSKG---FIPDIGTYSK 486
L++ N+ L G GK ++A +++ + ++PD+ K
Sbjct: 365 LSRPNMYKPVVERLMGAGKIDEATQLVKNGKLQSYFRYLPDLSAGKK 411
>AT2G19280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8362672-8364753 FORWARD
Length = 693
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 136/340 (40%), Gaps = 41/340 (12%)
Query: 181 IPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALV 240
+ +F+ + + + +L++ IRKYC +G ++ E L +K +G + + + +
Sbjct: 254 LAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFI 313
Query: 241 IVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE-------- 292
+A L A V ++ G S DS ++ CK GK +A+ LI
Sbjct: 314 DKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNI 373
Query: 293 -----------------------KEEF----VPDTILYTKMISGLCEASLFEEAMDFLNR 325
+E F +PD + YT MI G C ++A +
Sbjct: 374 FVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGA 433
Query: 326 MRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRD 385
+ + P++ T IL+ C R + + + M EG +N+L+H Y ++
Sbjct: 434 LLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQ 493
Query: 386 YSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLN 445
+ ++L+ +M G P YNILI + ++ A SE++ G V +
Sbjct: 494 LNKVFELIDEMRSAGISPDVATYNILI------HSMVVRGYIDEANEIISELIRRGFVPS 547
Query: 446 KVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ ++ G F++AF + M PD+ T S
Sbjct: 548 TLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCS 587
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 104/223 (46%), Gaps = 10/223 (4%)
Query: 224 LKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGK 283
+K G K +TYN L+ + + +L+ + + EM + G S D T HS+ G
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 528
Query: 284 WRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRI 340
+A +I + FVP T+ +T +I G + F+EA M P+VVT
Sbjct: 529 IDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSA 588
Query: 341 LLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCG 400
LL G + +++ + + + ++ G P ++N+L+H YC D A +L+ MV+ G
Sbjct: 589 LLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 648
Query: 401 CQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVV 443
P ++ L+ G+ G + S ET S +LE +V
Sbjct: 649 MLPNESTHHALVLGLEGKRFVNS-------ETHASMLLEEIIV 684
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 160/441 (36%), Gaps = 73/441 (16%)
Query: 101 NAILNNDDGFGSKTQKF--LRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSH 158
N I + GF ++ ++ +R + E+L A ++ + FF W+ IG H
Sbjct: 94 NWIQKYESGFSTELDQYTVIRILDDLFEETLDASIV---------LYFFRWSELWIGVEH 144
Query: 159 TQAVYNALLEMIESTNNNSNDRIPEQFLREIKD-------------------EDKEVLGK 199
+ + ++ ++ S N N R + L +K D+ VL
Sbjct: 145 SSRSISRMIHILVS--GNMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRIDRRVLET 202
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ ++LI + N AL+ ++ FG SR +L+ LR L+ A M
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 260 SNLGYSMDSFTLGCFAHSLCKAG---KWRDALTLIEKEEFVPDTILYTKMISGLCEASLF 316
+ G +++ L F C G K + L ++ PD + +T I LC+A
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 317 EEAMDFLNRMR--------------------------ANSCI------PNVVTYRILLCG 344
+EA L +++ A I PN+ Y L
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSN 382
Query: 345 CLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPG 404
+ R I + G P + +++ YC A++ ++K G P
Sbjct: 383 ICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPS 442
Query: 405 YVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEK 464
ILIG C + AE+ + M G+ L+ V +N + K
Sbjct: 443 LTTSTILIGA-CSR-----FGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNK 496
Query: 465 AFNVIREMMSKGFIPDIGTYS 485
F +I EM S G PD+ TY+
Sbjct: 497 VFELIDEMRSAGISPDVATYN 517
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 107/283 (37%), Gaps = 38/283 (13%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
+I YC G + A + G L G S T L+ R + A V R M
Sbjct: 412 TTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKT 471
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMD 321
G +D T Y ++ G + + +
Sbjct: 472 EGLKLDVVT--------------------------------YNNLMHGYGKTHQLNKVFE 499
Query: 322 FLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYC 381
++ MR+ P+V TY IL+ + + + I+S +I G PS F ++ +
Sbjct: 500 LIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFS 559
Query: 382 RSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVG 441
+ D+ A+ L M +P V + L+ G C + + VL ++++L+ G
Sbjct: 560 KRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVL------FNKLLDAG 613
Query: 442 VVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+ + V + C VG EKA +I M+ +G +P+ T+
Sbjct: 614 LKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
>AT5G57250.1 | Symbols: | EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: F mature embryo stage, 4 leaf
senescence stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G62910.1); Has 30133 Blast hits to 5951
proteins in 186 species: Archae - 6; Bacteria - 22;
Metazoa - 601; Fungi - 543; Plants - 27743; Viruses - 0;
Other Eukaryotes - 1218 (source: NCBI BLink). |
chr5:23195609-23198524 REVERSE
Length = 971
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 12/268 (4%)
Query: 224 LKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN--LGYSMDSFTLGCFAHSLCKA 281
L++ G S LT+ +L+ F+ ++D A V M+N + Y D+F CK
Sbjct: 125 LRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKI 184
Query: 282 GKWRDALTLIEKE----EFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVT 337
GK AL E VP+ + YT ++S LC+ +E D + R+ + V
Sbjct: 185 GKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVF 244
Query: 338 YRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMV 397
Y + G + L M+ +G ++ L+ + + A LL KM+
Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Query: 398 KCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLC 457
K G +P + Y +I G+C M LE A ++ +L VG+ +++ +C
Sbjct: 305 KEGVEPNLITYTAIIRGLC------KMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGIC 358
Query: 458 GVGKFEKAFNVIREMMSKGFIPDIGTYS 485
G +AF+++ +M +G P I TY+
Sbjct: 359 RKGNLNRAFSMLGDMEQRGIQPSILTYN 386
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 122/287 (42%), Gaps = 14/287 (4%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
L+ CQ G + + + RL+D G++ + Y+ + + + L A + REM
Sbjct: 211 TTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVE 270
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
G + D + L K G +AL L+ K E P+ I YT +I GLC+ EE
Sbjct: 271 KGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEE 330
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A NR+ + + Y L+ G RK L R +L M G PS +N++++
Sbjct: 331 AFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVIN 390
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
C + S A ++ K G + Y+ L+ +++ + VLE+ L
Sbjct: 391 GLCMAGRVSEADEVSK-----GVVGDVITYSTLLDSYIKVQNIDA--VLEIRR----RFL 439
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
E + ++ V + + +G + +A + R M PD TY+
Sbjct: 440 EAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYA 486
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 133/310 (42%), Gaps = 14/310 (4%)
Query: 169 MIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFG 228
++ S + N D+ + ++ + +V +LN I C+ G + AA+E ++
Sbjct: 557 LLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRR-- 614
Query: 229 YKASRLTYNALVIVFL--RAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRD 286
K +T+ + ++ L LD LV SMD + LCK G
Sbjct: 615 -KGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVK 673
Query: 287 ALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLC 343
AL L + +TI Y +I+GLC+ EA+ + + +P+ VTY IL+
Sbjct: 674 ALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILID 733
Query: 344 GCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
++ +++L M+ +G P+ I+NS+V YC+ A +++ + + P
Sbjct: 734 NLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTP 793
Query: 404 GYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFE 463
+ +I G C D +E A + ++E + + + + C G+ E
Sbjct: 794 DAFTVSSMIKGYCKKGD------MEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRME 847
Query: 464 KAFNVIREMM 473
+A ++REM+
Sbjct: 848 EARGLLREML 857
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 8/221 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRL-TYNALVIVFLRAEKLDTAYLVHREMS 260
+ +I +C+ G AL D G L TY LV + K+D + R +
Sbjct: 175 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVP-----DTILYTKMISGLCEASL 315
+ G+ D + H K G DAL ++ E V D + Y+ +I GL +
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDAL--MQDREMVEKGMNRDVVSYSILIDGLSKEGN 292
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
EEA+ L +M PN++TY ++ G + +L + + ++ G ++ +
Sbjct: 293 VEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVT 352
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC 416
L+ CR + + A+ +L M + G QP + YN +I G+C
Sbjct: 353 LIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLC 393
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 22/240 (9%)
Query: 263 GYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLCEASLFEEA 319
G ++++ T + LC+ G +AL L + E VP + Y +I LC+ LF +A
Sbjct: 685 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDA 744
Query: 320 MDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHA 379
L+ M + +PN++ Y ++ G + Q R++S +M P +S++
Sbjct: 745 EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKG 804
Query: 380 YCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN-----------EDLPSMDVLE 428
YC+ D A + + + + LI G C E L S V++
Sbjct: 805 YCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVK 864
Query: 429 LAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIP--DIGTYSK 486
L +E+ E ++ F LC G+ +A ++ E+ S + ++G+Y +
Sbjct: 865 LINRVDAELAE------SESIRGFLVELCEQGRVPQAIKILDEISSTIYPSGKNLGSYQR 918
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 299 DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRIL 358
D I YT +I+GLC+ +A++ + ++ N +TY L+ G ++ L R+
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 359 SLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
+ G PS + L+ C+ + A KLL MV G P ++YN ++ G C
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYC-- 771
Query: 419 EDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFI 478
+ E A S + V + VS+ + C G E+A +V E K
Sbjct: 772 ----KLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNIS 827
Query: 479 PD 480
D
Sbjct: 828 AD 829
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 117/287 (40%), Gaps = 53/287 (18%)
Query: 192 EDKEVLGKLLN-------VLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFL 244
+D+E++ K +N +LI + G AL LG++ G + + +TY A++
Sbjct: 264 QDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLC 323
Query: 245 RAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLI---EKEEFVPDTI 301
+ KL+ A+++ + ++G +D F +C+ G A +++ E+ P +
Sbjct: 324 KMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSIL 383
Query: 302 LYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKK------------ 349
Y +I+GLC A EA + + + +V+TY LL ++ +
Sbjct: 384 TYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRF 438
Query: 350 -------QLGRCKRILSLMIMEGCF----------------PSPGIFNSLVHAYCRSRDY 386
L C +L ++ G + P + +++ YC++
Sbjct: 439 LEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQI 498
Query: 387 SYAYKLLKKMVKCGCQPGYVVYNILIGGIC--GNEDLPSMDVLELAE 431
A ++ ++ K V YN +I +C G D + ++EL E
Sbjct: 499 EEALEMFNELRKSSVSAA-VCYNRIIDALCKKGMLDTATEVLIELWE 544
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 119/319 (37%), Gaps = 44/319 (13%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
+I+ YC+ G ALE L+ A+ + YN ++ + LDTA V E+ G
Sbjct: 488 MIKGYCKTGQIEEALEMFNELRKSSVSAA-VCYNRIIDALCKKGMLDTATEVLIELWEKG 546
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIEK-EEFVPDTIL--YTKMISGLCEASLFEEAM 320
+D T HS+ G + L L+ E+ D L I LC+ FE A+
Sbjct: 547 LYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAI 606
Query: 321 DFLNRMRANSCIP----------------------------------NVVTYRILLCGCL 346
+ MR +V+ Y I++ G
Sbjct: 607 EVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLC 666
Query: 347 RKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYV 406
++ L + + S G + +NSL++ C+ A +L + G P V
Sbjct: 667 KEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEV 726
Query: 407 VYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAF 466
Y ILI +C E L +D AE M+ G+V N + ++ C +G+ E A
Sbjct: 727 TYGILIDNLC-KEGL-FLD----AEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAM 780
Query: 467 NVIREMMSKGFIPDIGTYS 485
V+ M PD T S
Sbjct: 781 RVVSRKMMGRVTPDAFTVS 799
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 9/181 (4%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N +I C G + A +E+ + G +TY+ L+ +++ + +D + R
Sbjct: 386 NTVINGLCMAGRVSEA-DEVSK----GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLE 440
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
MD + G + +A L + + + PDT Y MI G C+ EE
Sbjct: 441 AKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEE 500
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A++ N +R +S V RI+ C +K L +L + +G + +L+H
Sbjct: 501 ALEMFNELRKSSVSAAVCYNRIIDALC-KKGMLDTATEVLIELWEKGLYLDIHTSRTLLH 559
Query: 379 A 379
+
Sbjct: 560 S 560
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 69/171 (40%), Gaps = 15/171 (8%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVI------VFLRAEKLDTAYLV 255
N LI CQ G AL L++ G S +TY L+ +FL AEKL +
Sbjct: 694 NSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDS--- 750
Query: 256 HREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE---EFVPDTILYTKMISGLCE 312
M + G + CK G+ DA+ ++ ++ PD + MI G C+
Sbjct: 751 ---MVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCK 807
Query: 313 ASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIM 363
EEA+ + + + + L+ G K ++ + +L M++
Sbjct: 808 KGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLV 858
>AT3G62540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23133514-23135313 REVERSE
Length = 599
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 147/374 (39%), Gaps = 48/374 (12%)
Query: 115 QKFLRQFREKLSESLVAEVLNLVKNP-ELGIKFFIWAGRQIGYSHTQAVYNALLEMIEST 173
+ L + + LS L+ EVL ++ + +FF WA + G++H YN+++ ++ T
Sbjct: 149 EAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKT 208
Query: 174 NNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASR 233
QF + + LEE+G +
Sbjct: 209 R---------QFETMV--------------------------SVLEEMGTKGLLTME--- 230
Query: 234 LTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK 293
T+ + F A++ A + M + + T+ C SL +A ++A L +K
Sbjct: 231 -TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK 289
Query: 294 --EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQL 351
E F P+ + YT +++G C EA N M + P++V + ++L G LR +
Sbjct: 290 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 349
Query: 352 GRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
++ +M +G P+ + ++ +C+ A + MV G QP VY L
Sbjct: 350 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 412 IGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIRE 471
I G + L + V EL + EM E G + + + + E + +
Sbjct: 410 ITGFGTQKKLDT--VYELLK----EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 463
Query: 472 MMSKGFIPDIGTYS 485
M+ P I T++
Sbjct: 464 MIQNEIEPSIHTFN 477
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 80/206 (38%), Gaps = 10/206 (4%)
Query: 213 LWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLG 272
+WN + D G K + +N ++ LR+ K A + M + G + +
Sbjct: 320 IWNDMI-------DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT 372
Query: 273 CFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRAN 329
CK A+ + PD +YT +I+G + + L M+
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 432
Query: 330 SCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYA 389
P+ TY L+ +K RI + MI PS FN ++ +Y +R+Y
Sbjct: 433 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMG 492
Query: 390 YKLLKKMVKCGCQPGYVVYNILIGGI 415
+ +M+K G P Y +LI G+
Sbjct: 493 RAVWDEMIKKGICPDDNSYTVLIRGL 518
>AT5G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4792072-4793868 REVERSE
Length = 598
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 147/374 (39%), Gaps = 48/374 (12%)
Query: 115 QKFLRQFREKLSESLVAEVLNLVKNP-ELGIKFFIWAGRQIGYSHTQAVYNALLEMIEST 173
+ L + + LS L+ EVL ++ + +FF WA + G++H YN+++ ++ T
Sbjct: 148 EAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKT 207
Query: 174 NNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASR 233
QF + + LEE+G +
Sbjct: 208 R---------QFETMV--------------------------SVLEEMGTKGLLTME--- 229
Query: 234 LTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK 293
T+ + F A++ A + M + + T+ C SL +A ++A L +K
Sbjct: 230 -TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK 288
Query: 294 --EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQL 351
E F P+ + YT +++G C EA N M + P++V + ++L G LR +
Sbjct: 289 LKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKK 348
Query: 352 GRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
++ +M +G P+ + ++ +C+ A + MV G QP VY L
Sbjct: 349 SDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCL 408
Query: 412 IGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIRE 471
I G + L + V EL + EM E G + + + + E + +
Sbjct: 409 ITGFGTQKKLDT--VYELLK----EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 462
Query: 472 MMSKGFIPDIGTYS 485
M+ P I T++
Sbjct: 463 MIQNEIEPSIHTFN 476
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 80/206 (38%), Gaps = 10/206 (4%)
Query: 213 LWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLG 272
+WN + D G K + +N ++ LR+ K A + M + G + +
Sbjct: 319 IWNDMI-------DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT 371
Query: 273 CFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRAN 329
CK A+ + PD +YT +I+G + + L M+
Sbjct: 372 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 431
Query: 330 SCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYA 389
P+ TY L+ +K RI + MI PS FN ++ +Y +R+Y
Sbjct: 432 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMG 491
Query: 390 YKLLKKMVKCGCQPGYVVYNILIGGI 415
+ +M+K G P Y +LI G+
Sbjct: 492 RAVWDEMIKKGICPDDNSYTVLIRGL 517
>AT5G42310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16915860-16918238 FORWARD
Length = 709
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 133/330 (40%), Gaps = 14/330 (4%)
Query: 155 GYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLW 214
G S + Y+ L++ + + RI L+E++ D + + + L+ + G W
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARI---VLKEMEAGDVQPNSFVFSRLLAGFRDRGEW 425
Query: 215 NAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCF 274
+ L +K G K R YN ++ F + LD A M + G D T
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 485
Query: 275 AHSLCKAGKW---RDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSC 331
CK G+ + +E+ +P Y MI+ + +++ L +M++
Sbjct: 486 IDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGI 545
Query: 332 IPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYK 391
+PNVVT+ L+ + + L M G PS ++N+L++AY + A
Sbjct: 546 LPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVN 605
Query: 392 LLKKMVKCGCQPGYVVYNILIGGICGNE-DLPSMDVLELAETAYSEMLEVGVVLNKVNVS 450
+ M G +P + N LI + D + VL+ M E GV + V +
Sbjct: 606 AFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQY-------MKENGVKPDVVTYT 658
Query: 451 NFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
+ L V KF+K V EM+ G PD
Sbjct: 659 TLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 130/323 (40%), Gaps = 15/323 (4%)
Query: 165 ALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRL 224
L+ +I + ++ E E++ + + N L++ Y + G A + +
Sbjct: 306 TLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM 365
Query: 225 KDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKW 284
+ G TY+ L+ ++ A + ++A +V +EM +SF G+W
Sbjct: 366 EKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEW 425
Query: 285 RDALTLIEKEEFV---PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRIL 341
+ ++++ + + PD Y +I + + + AM +RM + P+ VT+ L
Sbjct: 426 QKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTL 485
Query: 342 L-CGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCG 400
+ C C + + + + M GC P +N ++++Y + +LL KM G
Sbjct: 486 IDCHCKHGRHI-VAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 544
Query: 401 CQPGYVVYNILIG--GICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCG 458
P V + L+ G G + D +E E EM VG+ + +
Sbjct: 545 ILPNVVTHTTLVDVYGKSGRFN----DAIECLE----EMKSVGLKPSSTMYNALINAYAQ 596
Query: 459 VGKFEKAFNVIREMMSKGFIPDI 481
G E+A N R M S G P +
Sbjct: 597 RGLSEQAVNAFRVMTSDGLKPSL 619
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 136/339 (40%), Gaps = 16/339 (4%)
Query: 152 RQIGYSHTQAVYNALLEMIESTN--NNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYC 209
RQ G YNALL+ T ++ + E R + ++ ++LI Y
Sbjct: 331 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY-----SLLIDAYV 385
Query: 210 QNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSF 269
G W +A L ++ + + ++ L+ F + + V +EM ++G D
Sbjct: 386 NAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQ 445
Query: 270 TLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRM 326
+ K A+T ++ E PD + + +I C+ A + M
Sbjct: 446 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 505
Query: 327 RANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDY 386
C+P TY I++ +++ KR+L M +G P+ +LV Y +S +
Sbjct: 506 ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRF 565
Query: 387 SYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNK 446
+ A + L++M G +P +YN LI + E A A+ M G+ +
Sbjct: 566 NDAIECLEEMKSVGLKPSSTMYNALINAYA------QRGLSEQAVNAFRVMTSDGLKPSL 619
Query: 447 VNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ +++ + +AF V++ M G PD+ TY+
Sbjct: 620 LALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYT 658
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 140/372 (37%), Gaps = 45/372 (12%)
Query: 152 RQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQN 211
RQ GY Y+ +++ + + +N + + + +EI+ + E+ +L+N +I + ++
Sbjct: 224 RQDGYQSDFVNYSLVIQSL-TRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 212 GLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTL 271
G + AL+ LG + G A T +++ + + A + E+ G +
Sbjct: 283 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 342
Query: 272 GCFAHSLCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRA 328
K G +DA +++ EK PD Y+ +I A +E A L M A
Sbjct: 343 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 402
Query: 329 NSCIPNVVTYRILLCGCLRKKQLGRCKRIL------------------------------ 358
PN + LL G + + + ++L
Sbjct: 403 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 462
Query: 359 -----SLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIG 413
M+ EG P +N+L+ +C+ + A ++ + M + GC P YNI+I
Sbjct: 463 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 522
Query: 414 GICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMM 473
E M L +M G++ N V + G+F A + EM
Sbjct: 523 SYGDQERWDDMKRL------LGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 576
Query: 474 SKGFIPDIGTYS 485
S G P Y+
Sbjct: 577 SVGLKPSSTMYN 588
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 125/318 (39%), Gaps = 34/318 (10%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLV--HREM 259
N LI +N AL + +++ GY++ + Y+ ++ R+ K+D+ L+ ++E+
Sbjct: 201 NALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEI 260
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLF 316
+D + K+G AL L+ + T +IS L ++
Sbjct: 261 ERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRT 320
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
EA +R + P Y LL G ++ L + ++S M G P ++ L
Sbjct: 321 LEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLL 380
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN----------EDLPSMDV 426
+ AY + + A +LK+M QP V++ L+ G +++ S+ V
Sbjct: 381 IDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGV 440
Query: 427 -------------------LELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFN 467
L+ A T + ML G+ ++V + C C G+ A
Sbjct: 441 KPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEE 500
Query: 468 VIREMMSKGFIPDIGTYS 485
+ M +G +P TY+
Sbjct: 501 MFEAMERRGCLPCATTYN 518
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 104/260 (40%), Gaps = 17/260 (6%)
Query: 234 LTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL--- 290
LTYNAL+ R ++ A + +M GY D SL ++ K + L
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 291 --IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRK 348
IE+++ D L +I G ++ +A+ L +A T ++
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 349 KQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVY 408
+ + + + G P +N+L+ Y ++ A ++ +M K G P Y
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 409 NILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGV---GKFEKA 465
++LI + E A EM E G V + N F+R L G G+++K
Sbjct: 378 SLLIDAYV------NAGRWESARIVLKEM-EAGDV--QPNSFVFSRLLAGFRDRGEWQKT 428
Query: 466 FNVIREMMSKGFIPDIGTYS 485
F V++EM S G PD Y+
Sbjct: 429 FQVLKEMKSIGVKPDRQFYN 448
>AT3G61520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22768974-22771274 REVERSE
Length = 766
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 119/274 (43%), Gaps = 18/274 (6%)
Query: 223 RLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM----SNLG--YSMDSFTLGCFAH 276
++ + + +T L+ ++ ++D A V +M ++ G DS
Sbjct: 319 KMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLID 378
Query: 277 SLCKAGKWRDALTLIEK----EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCI 332
LCK G+ ++A L+ + E P+ + Y +I G C A E A + ++RM+ +
Sbjct: 379 GLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIK 438
Query: 333 PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKL 392
PNVVT ++ G R L M EG + + +L+HA C + A
Sbjct: 439 PNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYW 498
Query: 393 LKKMVKCGCQPGYVVYNILIGGICG-NEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSN 451
+KM++ GC P +Y LI G+C D ++ V+E ++ E G L+ + +
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVE-------KLKEGGFSLDLLAYNM 551
Query: 452 FARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
C EK + ++ +M +G PD TY+
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYN 585
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 124/288 (43%), Gaps = 10/288 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI YC+ G A E + R+K+ K + +T N +V R L+ A + +M
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
G + T H+ C A+ EK PD +Y +ISGLC+ +
Sbjct: 470 EGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD 529
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ + +++ +++ Y +L+ K + +L+ M EG P +N+L+
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM- 437
+ + +D+ +++++M + G P Y +I C S+ L+ A + +M
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC------SVGELDEALKLFKDMG 643
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
L V N V + +G F +A ++ EM K P++ TY+
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYN 691
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 4/218 (1%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
+N ++ C++ N A+ ++ G K + +TY L+ ++ A + +M
Sbjct: 444 VNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKML 503
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLCEASLFE 317
G S D+ LC+ + DA+ ++EK + F D + Y +I C+ + E
Sbjct: 504 EAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTE 563
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
+ + L M P+ +TY L+ + K +R++ M +G P+ + +++
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 378 HAYCRSRDYSYAYKLLKKM-VKCGCQPGYVVYNILIGG 414
AYC + A KL K M + P V+YNILI
Sbjct: 624 DAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 92/228 (40%), Gaps = 4/228 (1%)
Query: 198 GKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHR 257
K+ LI CQ + A+ + +LK+ G+ L YN L+ +F + Y +
Sbjct: 511 AKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLT 570
Query: 258 EMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEAS 314
+M G DS T K + ++E+ + P Y +I C
Sbjct: 571 DMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVG 630
Query: 315 LFEEAMDFLNRMRANSCI-PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIF 373
+EA+ M +S + PN V Y IL+ + G+ + M M+ P+ +
Sbjct: 631 ELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETY 690
Query: 374 NSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDL 421
N+L KL+ +MV+ C+P + IL+ + G+++L
Sbjct: 691 NALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 158/435 (36%), Gaps = 105/435 (24%)
Query: 142 LGIKFFIW--AGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGK 199
L I FF + A Q +++ AL +IE + + R L EI E L
Sbjct: 93 LAISFFEYLDAKSQSLKRREESLSLALQSVIEFAGSEPDPRDKLLRLYEIAKEKNIPLTV 152
Query: 200 L-LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
+ N+LIR + + G+ N ++ RL D K S++ N +V V LR +D A+ V E
Sbjct: 153 VATNLLIRWFGRMGMVNQSVLVYERL-DSNMKNSQVR-NVVVDVLLRNGLVDDAFKVLDE 210
Query: 259 M--SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK----------EEFVPDTILYTKM 306
M + + T H + W+ L EK P+++ T+
Sbjct: 211 MLQKESVFPPNRITADIVLHEV-----WKGRLLTEEKIIALISRFSSHGVSPNSVWLTRF 265
Query: 307 ISGLCEASLFEEAMDFLNRMRAN-------------SCI--------------------- 332
IS LC+ + A D L+ + N SC+
Sbjct: 266 ISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI 325
Query: 333 -PNVVTYRIL---LCGCLRKKQ-----------------------------------LGR 353
P+VVT IL LC R + +GR
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGR 385
Query: 354 CKRILSLMIM----EGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYN 409
K L++ E C P+ +N L+ YCR+ A +++ +M + +P V N
Sbjct: 386 LKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVN 445
Query: 410 ILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVI 469
++GG+C + L +A + +M + GV N V C V EKA
Sbjct: 446 TIVGGMCRHHG------LNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWY 499
Query: 470 REMMSKGFIPDIGTY 484
+M+ G PD Y
Sbjct: 500 EKMLEAGCSPDAKIY 514
>AT1G13630.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT3G22470.1); Has
23967 Blast hits to 5877 proteins in 185 species: Archae
- 3; Bacteria - 26; Metazoa - 708; Fungi - 595; Plants -
21695; Viruses - 0; Other Eukaryotes - 940 (source: NCBI
BLink). | chr1:4669784-4672826 REVERSE
Length = 806
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 133/292 (45%), Gaps = 18/292 (6%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N+L + + G+ + A E + + D G +TY L+ + +D ++ ++M +
Sbjct: 296 NILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLS 355
Query: 262 LGYSMDSFT-LGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFE 317
G+ ++S LCK G+ +AL+L ++ + PD + Y+ +I GLC+ F+
Sbjct: 356 RGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFD 415
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
A+ + M +PN T+ LL G +K L + +L +I G ++N ++
Sbjct: 416 MALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVI 475
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPS----MDVLELAETA 433
Y +S A +L K +++ G P +N LI G C +++ +DV++L A
Sbjct: 476 DGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLA 535
Query: 434 YSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
S VV + +A C G + + REM ++G P TYS
Sbjct: 536 PS------VVSYTTLMDAYANC----GNTKSIDELRREMKAEGIPPTNVTYS 577
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 126/293 (43%), Gaps = 9/293 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
+V++ C+ G + AL ++K G + Y+ ++ + K D A ++ EM +
Sbjct: 367 SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCD 426
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
+S T G LC+ G +A +L++ D +LY +I G ++ EE
Sbjct: 427 KRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEE 486
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A++ + P+V T+ L+ G + + + ++IL ++ + G PS + +L+
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMD------VLELAET 432
AY + +L ++M G P V Y+++ G+C + + + E +
Sbjct: 547 AYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQ 606
Query: 433 AYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+M G+ +++ + + LC V AF + M S+ TY+
Sbjct: 607 GLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYN 659
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 119/310 (38%), Gaps = 23/310 (7%)
Query: 193 DKEVL--GKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLD 250
DK +L + L+ CQ G+ A L L G + YN ++ + ++ ++
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 251 TAYLVHREMSNLGYSMDSFTLGCFAHSLCKA---GKWRDALTLIEKEEFVPDTILYTKMI 307
A + + + G + T + CK + R L +I+ P + YT ++
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM 545
Query: 308 SGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCG------------CLRKKQLGRCK 355
+ + M+A P VTY ++ G LR++ +CK
Sbjct: 546 DAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCK 605
Query: 356 RILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
+ L M EG P +N+++ CR + S A+ L+ M YNILI +
Sbjct: 606 QGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSL 665
Query: 416 CGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSK 475
C + A++ + E V L+K + + C G E A + +++ +
Sbjct: 666 C------VYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHR 719
Query: 476 GFIPDIGTYS 485
GF I YS
Sbjct: 720 GFNVSIRDYS 729
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 114/270 (42%), Gaps = 51/270 (18%)
Query: 218 LEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM--SNLGYSMDSFTLGCFA 275
L+E G + ++++ L ++ L+ + R +D + + ++M NL S S+
Sbjct: 111 LQEEGTFRK--WESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSY------ 162
Query: 276 HSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNV 335
+S+ + D + + KE + Y+ ++ GLC E+A+ FL P+V
Sbjct: 163 NSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSV 222
Query: 336 VTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKK 395
V+ FNS++ YC+ A
Sbjct: 223 VS-----------------------------------FNSIMSGYCKLGFVDMAKSFFCT 247
Query: 396 MVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARC 455
++KCG P +NILI G+C + + LELA S+M + GV + V + A+
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIA--EALELA----SDMNKHGVEPDSVTYNILAKG 301
Query: 456 LCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+G A+ VIR+M+ KG PD+ TY+
Sbjct: 302 FHLLGMISGAWEVIRDMLDKGLSPDVITYT 331
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 134/307 (43%), Gaps = 23/307 (7%)
Query: 185 FLREIKDEDKEVLGKLLNVLIRKYCQ-NGLWNAALEELGRLKDFGYKASRLTYNALVIVF 243
L+++KD++ V + N ++ + + + +W+ E +KD + TY+ +V
Sbjct: 146 ILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKE----IKD----KNEHTYSTVVDGL 197
Query: 244 LRAEKLDTAYLVHR--EMSNLGYSMDSFTLGCFAHSLCKAG---KWRDALTLIEKEEFVP 298
R +KL+ A L R E ++G S+ SF CK G + + K VP
Sbjct: 198 CRQQKLEDAVLFLRTSEWKDIGPSVVSFN--SIMSGYCKLGFVDMAKSFFCTVLKCGLVP 255
Query: 299 DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRIL 358
+ +I+GLC EA++ + M + P+ VTY IL G + ++
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Query: 359 SLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVV-YNILIGGICG 417
M+ +G P + L+ C+ + LLK M+ G + ++ ++++ G+C
Sbjct: 316 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCK 375
Query: 418 NEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGF 477
+ A + +++M G+ + V S LC +GKF+ A + EM K
Sbjct: 376 TGRIDE------ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRI 429
Query: 478 IPDIGTY 484
+P+ T+
Sbjct: 430 LPNSRTH 436
>AT1G79080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:29747102-29748832 REVERSE
Length = 576
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 13/215 (6%)
Query: 276 HSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCI 332
+ LCKA + + A+ +IE +PD YT +++ LC+ AM + +M +
Sbjct: 114 YDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYP 173
Query: 333 PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKL 392
N VTY L+ G L + + + ++ +G P+ ++ L+ A + R A KL
Sbjct: 174 SNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKL 233
Query: 393 LKKMVKCGCQPGYVVYNILIGGIC--GNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVS 450
L +++ G +P V YN+L+ G C G D D + L + E+ G N V+ +
Sbjct: 234 LDEIIVKGGEPNLVSYNVLLTGFCKEGRTD----DAMAL----FRELPAKGFKANVVSYN 285
Query: 451 NFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
RCLC G++E+A +++ EM P + TY+
Sbjct: 286 ILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYN 320
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 10/252 (3%)
Query: 228 GYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA 287
G+K + L+ +A +L A V M + G D+ + LCK G A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 288 LTLIEKEE---FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCG 344
+ L+EK E + +T+ Y ++ GLC +++ F+ R+ PN TY LL
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 345 CLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPG 404
+++ ++L +I++G P+ +N L+ +C+ A L +++ G +
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 405 YVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEK 464
V YNIL+ +C + E A + +EM + V + L G+ E+
Sbjct: 281 VVSYNILLRCLCCD------GRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQ 334
Query: 465 AFNVIREMMSKG 476
A V++E MSKG
Sbjct: 335 ALQVLKE-MSKG 345
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 125/293 (42%), Gaps = 18/293 (6%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
NVL+ +C+ G + A+ L G+KA+ ++YN L+ + + A + EM
Sbjct: 250 NVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDG 309
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK-----EEFVPDTILYTKMISGLCEASLF 316
+ T +SL G+ AL ++++ +F Y +I+ LC+
Sbjct: 310 GDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKV 369
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
+ + L+ M C PN TY + C ++ I+ + + + + S+
Sbjct: 370 DLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSV 429
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLP-SMDVLELAETAYS 435
+ + CR + A++LL +M +CG P Y+ LI G+C +M+VL + E + +
Sbjct: 430 ITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESEN 489
Query: 436 EMLEVGVVLNKVNVSNFARCLCGVGKFEK---AFNVIREMMSKGFIPDIGTYS 485
K V NF + G+ K + A V M+ K +P+ TY+
Sbjct: 490 ---------CKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYA 533
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 128/322 (39%), Gaps = 41/322 (12%)
Query: 184 QFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF 243
Q + +++D N L+R C G N +L+ + RL G + TY+ L+
Sbjct: 162 QLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAA 221
Query: 244 LRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDT 300
+ D A + E+ G + + CK G+ DA+ L + + F +
Sbjct: 222 YKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANV 281
Query: 301 ILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSL 360
+ Y ++ LC +EEA L M P+VVTY IL+ GR ++ L +
Sbjct: 282 VSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFH---GRTEQALQV 338
Query: 361 M--IMEGCFP---SPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
+ + +G + +N ++ C+ K L +M+ C+P YN IG +
Sbjct: 339 LKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSL 397
Query: 416 CGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARC------------LCGVGKFE 463
C + S++ E ++ ++SN +C LC G
Sbjct: 398 CEHN---------------SKVQEAFYIIQ--SLSNKQKCCTHDFYKSVITSLCRKGNTF 440
Query: 464 KAFNVIREMMSKGFIPDIGTYS 485
AF ++ EM GF PD TYS
Sbjct: 441 AAFQLLYEMTRCGFDPDAHTYS 462
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 101/255 (39%), Gaps = 9/255 (3%)
Query: 235 TYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK- 293
Y LV + + A + +M + GY ++ T LC G +L +E+
Sbjct: 143 AYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERL 202
Query: 294 --EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQL 351
+ P+ Y+ ++ + +EA+ L+ + PN+V+Y +LL G ++ +
Sbjct: 203 MQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRT 262
Query: 352 GRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
+ + +G + +N L+ C + A LL +M P V YNIL
Sbjct: 263 DDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNIL 322
Query: 412 IGGIC-GNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIR 470
I + ++ VL+ + N V AR LC GK + +
Sbjct: 323 INSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPV----IAR-LCKEGKVDLVVKCLD 377
Query: 471 EMMSKGFIPDIGTYS 485
EM+ + P+ GTY+
Sbjct: 378 EMIYRRCKPNEGTYN 392
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 29/182 (15%)
Query: 333 PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKL 392
PNV LL + +L + R++ LM+ G P + LV+ C+ + YA +L
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL 163
Query: 393 LKKMVKCGCQPGYVVYNILIGGICG----NEDLPSMDVLE-------------LAETAY- 434
++KM G V YN L+ G+C N+ L ++ L L E AY
Sbjct: 164 VEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYK 223
Query: 435 -----------SEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGT 483
E++ G N V+ + C G+ + A + RE+ +KGF ++ +
Sbjct: 224 ERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVS 283
Query: 484 YS 485
Y+
Sbjct: 284 YN 285
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 100/263 (38%), Gaps = 48/263 (18%)
Query: 183 EQFLREIKDEDK-----EVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYN 237
EQ L+ +K+ K V N +I + C+ G + ++ L + K + TYN
Sbjct: 333 EQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYN 392
Query: 238 ALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE-- 295
A+ + K+ A+ + + +SN SLC+ G A L+ +
Sbjct: 393 AIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRC 452
Query: 296 -FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRC 354
F PD Y+ +I GLC +F AM+ L+ M +
Sbjct: 453 GFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEES------------------------- 487
Query: 355 KRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG 414
E C P+ FN+++ C+ R A ++ + MV+ P Y IL+ G
Sbjct: 488 ---------ENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEG 538
Query: 415 ICGNEDLPSMDVLELAETAYSEM 437
I D LELA+ E+
Sbjct: 539 IAHE------DELELAKEVLDEL 555
>AT2G32630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13844834-13846708 FORWARD
Length = 624
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 139/346 (40%), Gaps = 12/346 (3%)
Query: 143 GIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLN 202
G++ + ++ G + + Y L+E+ S+ E+ E+++ E +
Sbjct: 277 GVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSD---AEKLFDEMRERGIESDVHVYT 333
Query: 203 VLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNL 262
LI C+ G A L + G S TY AL+ + ++ A ++ EM +
Sbjct: 334 SLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSK 393
Query: 263 GYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEEA 319
G ++ C+ G +A ++E++ F D + S ++EA
Sbjct: 394 GVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEA 453
Query: 320 MDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHA 379
+L RM + V+Y L+ ++ + KR+ M +G P+ +N +++A
Sbjct: 454 KQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYA 513
Query: 380 YCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLE 439
YC+ A KL M G P Y LI G C D ++ A +SEM
Sbjct: 514 YCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGEC------IADNVDEAMRLFSEMGL 567
Query: 440 VGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
G+ N V + L GK ++AF + EM KG+ D Y+
Sbjct: 568 KGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYT 613
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 122/289 (42%), Gaps = 17/289 (5%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEK----LDTAYLVHR 257
+++ R Y NG++ L R+ D+ K IVFL A K +D + R
Sbjct: 158 DLVFRVYVDNGMFEEGL----RVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFR 213
Query: 258 EMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEAS 314
M + G + ++L LC+ G+ + LI++ + P+ Y +I+ +
Sbjct: 214 RMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQR 273
Query: 315 LFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFN 374
F L M+ + + N VTY +L+ ++ ++ +++ M G ++
Sbjct: 274 DFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYT 333
Query: 375 SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAY 434
SL+ CR + A+ L ++ + G P Y LI G+C ++ + ++L
Sbjct: 334 SLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEIL------M 387
Query: 435 SEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGT 483
+EM GV + +V + C G ++A + M KGF D+ T
Sbjct: 388 NEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFT 436
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 127/324 (39%), Gaps = 11/324 (3%)
Query: 104 LNNDDGFGSKTQKFLRQFREKLSESLVAEVLNLV----KNPELGIKFFIWAG-RQIGYSH 158
L+ +G S +K + RE+ ES V +L+ + + F ++ + G S
Sbjct: 303 LSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSP 362
Query: 159 TQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAAL 218
+ Y AL++ + E + E++ + + + N LI YC+ G+ + A
Sbjct: 363 SSYTYGALIDGVCKVGEMG---AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEAS 419
Query: 219 EELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSL 278
++ G++A T N + F R ++ D A M G + + +
Sbjct: 420 MIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVY 479
Query: 279 CKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNV 335
CK G +A L + + P+ I Y MI C+ +EA M AN P+
Sbjct: 480 CKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDS 539
Query: 336 VTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKK 395
TY L+ G + R+ S M ++G + + ++ ++ A+ L +
Sbjct: 540 YTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDE 599
Query: 396 MVKCGCQPGYVVYNILIGGICGNE 419
M + G VY LIG + E
Sbjct: 600 MKRKGYTIDNKVYTALIGSMHSPE 623
>AT2G37230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15637177-15639450 REVERSE
Length = 757
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 139/331 (41%), Gaps = 19/331 (5%)
Query: 83 LESKFDTGKRSNDAVLISNAI--LNNDDGFGSKTQKFLRQFREKLSESLVAEVLNLVKNP 140
L +F GKR N L + I + ++ + ++ Q +R + SLV VL+ K
Sbjct: 72 LRERFQRGKRQNHEKL-EDTICRMMDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKL 130
Query: 141 ELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDR-----IPEQFLREIKDEDKE 195
E ++FF W R H + + +++M+ + ++ R +PE+ + DED
Sbjct: 131 EHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPW--DED-- 186
Query: 196 VLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLV 255
+ VLI Y + G+ +++ ++KD G + + +YN+L V LR + A
Sbjct: 187 ----MFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRY 242
Query: 256 HREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLCE 312
+M + G T + + AL E + PD + MI+G C
Sbjct: 243 FNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCR 302
Query: 313 ASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGI 372
+EA M+ N P+VV+Y ++ G L ++ RI M G P+
Sbjct: 303 FKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATT 362
Query: 373 FNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
+++L+ C + A +LK M+ P
Sbjct: 363 YSTLLPGLCDAGKMVEAKNILKNMMAKHIAP 393
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 102/253 (40%), Gaps = 9/253 (3%)
Query: 230 KASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALT 289
+ R T+ ++ + KL+ A + +M G D S KAG ++++
Sbjct: 147 RHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVK 206
Query: 290 LIEKEE--FVPDTIL-YTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCL 346
+ +K + V TI Y + + + A + N+M + P TY ++L G
Sbjct: 207 IFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFF 266
Query: 347 RKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYV 406
+L R M G P FN++++ +CR + A KL +M P V
Sbjct: 267 LSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVV 326
Query: 407 VYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAF 466
Y +I G ++D ++ + EM G+ N S LC GK +A
Sbjct: 327 SYTTMIKGYL------AVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAK 380
Query: 467 NVIREMMSKGFIP 479
N+++ MM+K P
Sbjct: 381 NILKNMMAKHIAP 393
>AT1G66345.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:24737719-24739353 FORWARD
Length = 544
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 172/406 (42%), Gaps = 38/406 (9%)
Query: 104 LNNDDGFGSKTQKFLRQFREKLSESLVAEVLNLVKNPELG---IKFFIWAGRQIGYSHTQ 160
L ++D + + + KF LS+SL+ +L KNPE + FF W+ H
Sbjct: 57 LQSNDTWETLSTKFSSI---DLSDSLIETILLRFKNPETAKQALSFFHWSSHTRNLRHGI 113
Query: 161 AVYNALLE-------------MIESTNNNSNDRIPEQFLREIKDEDKEVLGK---LLNVL 204
Y + +IES+ NS P+ L + + E+ + ++L
Sbjct: 114 KSYALTIHILVKARLLIDARALIESSLLNSP---PDSDLVDSLLDTYEISSSTPLVFDLL 170
Query: 205 IRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGY 264
++ Y + + RL D G+ S +T N L+ +++ D + ++ +
Sbjct: 171 VQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRI 230
Query: 265 SMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMD 321
+ T+ LCK G+ ++ + L+++ + +P I+ T ++ + E EE+M
Sbjct: 231 YPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMS 290
Query: 322 FLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYC 381
L R+ + + + + Y I++ ++ L +++ M+ G + ++ V C
Sbjct: 291 LLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCC 350
Query: 382 RSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC--GNEDLPSMDVLELAETAYSEMLE 439
D A +LL +M + G P +N LIGG G E+ LE E M+
Sbjct: 351 EKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEE----KGLEYCEV----MVT 402
Query: 440 VGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
G++ + + + + + +A ++ + + KGF+PD TYS
Sbjct: 403 RGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYS 448
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 81/182 (44%), Gaps = 5/182 (2%)
Query: 240 VIVFLRAEKLD--TAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKE 294
++V+ +A++ D +A V EM G+S +SF F C+ G ++A L+ +E+
Sbjct: 309 IVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEES 368
Query: 295 EFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRC 354
P + +I G E+ +++ M +P+ + ++ + + + R
Sbjct: 369 GVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRA 428
Query: 355 KRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG 414
IL+ I +G P ++ L+ + D A KL +M PG+ V+ LI G
Sbjct: 429 NEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVG 488
Query: 415 IC 416
+C
Sbjct: 489 LC 490
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 114/291 (39%), Gaps = 17/291 (5%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
+ ++I+ C+ G ++ L R+ S + +LV L +++ + + + +
Sbjct: 237 IRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLL 296
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFE 317
+D+ ++ K G A + + + F ++ +YT + CE +
Sbjct: 297 MKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVK 356
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLR----KKQLGRCKRILSLMIMEGCFPSPGIF 373
EA L+ M + P T+ L+ G R +K L C+ +M+ G PS F
Sbjct: 357 EAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCE----VMVTRGLMPSCSAF 412
Query: 374 NSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETA 433
N +V + + + + A ++L K + G P Y+ LI G D+ L E
Sbjct: 413 NEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKL-FYEME 471
Query: 434 YSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
Y +M V + V LC GK E ++ M + P+ Y
Sbjct: 472 YRKMSPGFEVFRSLIVG-----LCTCGKVEAGEKYLKIMKKRLIEPNADIY 517
>AT1G71210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26838850-26841489 REVERSE
Length = 879
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 168/415 (40%), Gaps = 51/415 (12%)
Query: 106 NDDGFGSKTQKFLRQFREKLSESLVAEVLNLVKNPELG-IKFFIWAGRQIGYSHTQAVYN 164
++DG L R +L+E V +VL+ + L +KFF WA RQ G+ HT+A ++
Sbjct: 91 SNDGDDRAFYLHLSNLRLRLTEKFVLDVLSHTRYDILCCLKFFDWAARQPGFHHTRATFH 150
Query: 165 ALLEMIESTNNNSNDRIPEQFL-REIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGR 223
A+ +++ + + FL R + E +L + L+ Y G + AL+ G
Sbjct: 151 AIFKILRGAKLVT---LMIDFLDRSVGFESCRHSLRLCDALVVGYAVAGRTDIALQHFGN 207
Query: 224 LK-------DFGYK---------------------------ASRLTYNALVIVFLRAEKL 249
++ FGY +T++ LV F + KL
Sbjct: 208 MRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAVTHSILVKKFCKQGKL 267
Query: 250 DTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTIL---YTKM 306
D A R + + LG +LC K+++A L+++ + V + Y
Sbjct: 268 DEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIW 327
Query: 307 ISGLCEASLFEEAMDFLNRMRA-NSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEG 365
I L +A DFL ++ C V Y ++ L++ L IL+ M++ G
Sbjct: 328 IRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRG 387
Query: 366 CFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDL-PSM 424
P+ N+ + +C++ A +L + + G P + YN LI +C NE + +
Sbjct: 388 VSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAY 447
Query: 425 DVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIP 479
DVL+ A ++ G L S LC GK + A ++ + +P
Sbjct: 448 DVLKGA-------IDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLP 495
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/357 (19%), Positives = 137/357 (38%), Gaps = 41/357 (11%)
Query: 163 YNALLEMIESTNN--NSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEE 220
YN+++ + NN D + E +R + K +N + +C+ G + ALE
Sbjct: 360 YNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKT-----MNAALCFFCKAGFVDEALEL 414
Query: 221 LGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCK 280
+ G+ + ++YN L+ E ++ AY V + + G+ + T ++LC
Sbjct: 415 YRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCW 474
Query: 281 AGK---WRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVT 337
GK R+ + + + +P I K+IS LC+ E+A+ + +
Sbjct: 475 KGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKM 534
Query: 338 YRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYC--RSRDYSYAYKLLKK 395
+ L+ G + + +++ M +G P+ ++ +++ C S + ++ LLK
Sbjct: 535 FTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKF 594
Query: 396 MVKCGCQPGYVVYNILI--GGICGNEDLPS-----MDVLELAETAYSEMLEVGVVLNKVN 448
+ + YN+ I G G L MD + T S +L + L
Sbjct: 595 QLSL-WEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEK 653
Query: 449 VSNFAR---------------------CLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+++ LC K + A + + EM +G P I Y
Sbjct: 654 IADALHFFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECY 710
>AT2G39230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16381647-16384250 FORWARD
Length = 867
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 124/287 (43%), Gaps = 39/287 (13%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRL-KDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
+ N +I C+ G + A E L L K+ Y S +YN+++ F++ D+A +RE
Sbjct: 556 IYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYRE 615
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
MS G S P+ + +T +I+G C+++ +
Sbjct: 616 MSENGKS--------------------------------PNVVTFTSLINGFCKSNRMDL 643
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A++ + M++ ++ Y L+ G +K + + S + G P+ ++NSL+
Sbjct: 644 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 703
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
+ A L KKMV G Y +I G+ + + + LA YSE+L
Sbjct: 704 GFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGN------INLASDLYSELL 757
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
++G+V +++ L G+F KA ++ EM K P++ YS
Sbjct: 758 DLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYS 804
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 132/295 (44%), Gaps = 16/295 (5%)
Query: 198 GKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHR 257
G + N + +C+ G +AA L ++ G + + + YN +++ R + +D A +
Sbjct: 449 GFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFS 508
Query: 258 EMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEAS 314
EM G ++FT K ++A +I + F + ++Y +I+GLC+
Sbjct: 509 EMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVG 568
Query: 315 LFEEAMDFL-NRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIF 373
+A + L N ++ + +Y ++ G ++ M G P+ F
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTF 628
Query: 374 NSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETA 433
SL++ +C+S A ++ +M + Y LI G C D+ + A T
Sbjct: 629 TSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKT------AYTL 682
Query: 434 YSEMLEVGVVLNKVNVSNFARCLCG---VGKFEKAFNVIREMMSKGFIPDIGTYS 485
+SE+ E+G++ NVS + + G +GK + A ++ ++M++ G D+ TY+
Sbjct: 683 FSELPELGLM---PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYT 734
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 127/290 (43%), Gaps = 19/290 (6%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
L+ YC+ AL+ R+++ G ++ ++ +V F + +++ A + M ++
Sbjct: 351 LVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVR 410
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIEK--EEFVPDTILYTKMISGLCEASLFEEAMD 321
+ S + KA AL + E ++ + K+ C+ + A
Sbjct: 411 IAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATS 470
Query: 322 FLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYC 381
FL M PNVV Y ++ R K + + I S M+ +G P+ ++ L+ +
Sbjct: 471 FLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFF 530
Query: 382 RSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYS-EMLEV 440
+++D A+ ++ +M + V+YN +I G+C ++ +T+ + EML+
Sbjct: 531 KNKDEQNAWDVINQMNASNFEANEVIYNTIINGLC-----------KVGQTSKAKEMLQN 579
Query: 441 GVVLNKVNVS--NFARCLCG---VGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ + ++S ++ + G VG + A REM G P++ T++
Sbjct: 580 LIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 6/262 (2%)
Query: 156 YSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWN 215
YS + YN++++ + D E + RE+ + K LI +C++ +
Sbjct: 586 YSMSCTSYNSIIDGFVKVGDT--DSAVETY-REMSENGKSPNVVTFTSLINGFCKSNRMD 642
Query: 216 AALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFA 275
ALE +K K Y AL+ F + + TAY + E+ LG +
Sbjct: 643 LALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLI 702
Query: 276 HSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCI 332
GK A+ L +K + D YT MI GL + A D + + +
Sbjct: 703 SGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIV 762
Query: 333 PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKL 392
P+ + + +L+ G +K Q + ++L M + P+ ++++++ + R + + A++L
Sbjct: 763 PDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRL 822
Query: 393 LKKMVKCGCQPGYVVYNILIGG 414
+M++ G V+N+L+ G
Sbjct: 823 HDEMLEKGIVHDDTVFNLLVSG 844
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 102/511 (19%), Positives = 190/511 (37%), Gaps = 84/511 (16%)
Query: 24 PIFPSNFQSHNLLCVISRFMSSSSDDLEGLFDPEDPMSLD--NSRMESISSKEF----SF 77
PIF F + + +RF+ P D S D +S E+IS+ EF S
Sbjct: 13 PIFLHRFINPKPISSQTRFLH-----------PPDNQSRDISDSTTETISTLEFPHKTSV 61
Query: 78 LRDSLLESKFDTGKRSNDAVLISNAILNNDDGFGSKTQKFLRQFREKLSESLVAEVLNLV 137
S L S +T +DA +I + +D + + +L E
Sbjct: 62 PNHSPLTSTSETENHVDDARVIEVLLGRRNDPVSALQYCNWVKPLHRLCEG--------- 112
Query: 138 KNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDK--- 194
G F++ + HT + LL M S N IP + + D K
Sbjct: 113 -----GDVFWVLIHILLSSIHTHDRASNLLVMFVSNNPT---LIPNVMVNNLVDSSKRFG 164
Query: 195 -EVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAY 253
E+ + N L+ Y +N + A++ G + D N ++ +R+ +D A
Sbjct: 165 FELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAK 224
Query: 254 LVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGL 310
++ +M +G + D+ T + + K +A+ + + PD +L++ +
Sbjct: 225 EIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAA 284
Query: 311 CEASLFEEAMDFLNRMRANSCIP------------------------------------N 334
C+ A+D L MR +P +
Sbjct: 285 CKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMS 344
Query: 335 VVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLK 394
V+ L+ G + +LG+ + + M EG P +F+ +V +C++ + A +
Sbjct: 345 VIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYM 404
Query: 395 KMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFAR 454
+M P V+ + +I G C + P LE+ ++ + G + NK+ +
Sbjct: 405 RMKSVRIAPSSVLVHTMIQG-CLKAESPEA-ALEIFNDSFESWIAHGFMCNKIFL----- 457
Query: 455 CLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
C GK + A + ++ M KG P++ Y+
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYN 488
>AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
12 plant structures; EXPRESSED DURING: 6 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G55840.1); Has 31003 Blast hits to 6161
proteins in 194 species: Archae - 6; Bacteria - 22;
Metazoa - 935; Fungi - 736; Plants - 27904; Viruses - 0;
Other Eukaryotes - 1400 (source: NCBI BLink). |
chr1:6666249-6668963 FORWARD
Length = 904
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 118/288 (40%), Gaps = 15/288 (5%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
LI+ YC+ GL A LK+ A + Y L+ + R ++ A VH M +G
Sbjct: 302 LIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIG 361
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIEKE---EFVPDTILYTKMISGLCEASLFEEAM 320
++ + CK+G+ +A + + PD Y ++ G C A +EA+
Sbjct: 362 VRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEAL 421
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
++M +P V+TY ILL G R + +M+ G ++L+ A
Sbjct: 422 KLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEAL 481
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEV 440
+ D++ A KL + ++ G + N++I G+C +E A + V
Sbjct: 482 FKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCK---------MEKVNEAKEILDNV 532
Query: 441 GVVLNKVNVSNFARCLCG---VGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ K V + G VG ++AF V M KG P I Y+
Sbjct: 533 NIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYN 580
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 120/286 (41%), Gaps = 9/286 (3%)
Query: 183 EQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIV 242
EQ + D + N L+ YC+ G + AL+ ++ + +TYN L+
Sbjct: 386 EQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKG 445
Query: 243 FLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPD 299
+ R + + M G + D + +L K G + +A+ L E + D
Sbjct: 446 YSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTD 505
Query: 300 TILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILS 359
TI MISGLC+ EA + L+ + C P V TY+ L G + L +
Sbjct: 506 TITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKE 565
Query: 360 LMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNE 419
M +G FP+ ++N+L+ + R + L+ ++ G P Y LI G C
Sbjct: 566 YMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWC--- 622
Query: 420 DLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKA 465
++ +++ A EM+E G+ LN S A L + K ++A
Sbjct: 623 ---NIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEA 665
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 120/301 (39%), Gaps = 33/301 (10%)
Query: 216 AALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM-SNLGYSMDSFTLGCF 274
AL ++ F T + +V + R+ +D A + +E S+LG ++ T
Sbjct: 208 VALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSL 267
Query: 275 AHSLCKAGKWRD---ALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSC 331
+ G L L+ + + + YT +I G C+ L EEA ++
Sbjct: 268 INGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKL 327
Query: 332 IPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYK 391
+ + Y +L+ G R Q+ R+ MI G + I NSL++ YC+S A +
Sbjct: 328 VADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQ 387
Query: 392 LLKKMVKCGCQPGYVVYNILIGG----------------ICGNEDLPSMDVLELAETAYS 435
+ +M +P + YN L+ G +C E +P++ + YS
Sbjct: 388 IFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYS 447
Query: 436 E-------------MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIG 482
ML+ GV ++++ S L +G F +A + ++++G + D
Sbjct: 448 RIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTI 507
Query: 483 T 483
T
Sbjct: 508 T 508
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 116/247 (46%), Gaps = 13/247 (5%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNL- 262
LI +C G+ + A + + G + + + R +K+D A L+ +++ +
Sbjct: 617 LITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFD 676
Query: 263 ----GYSMDSFTLGCFAHSLCKAGKWRDAL-TLIEKEEFVPDTILYTKMISGLCEASLFE 317
GY L A + K K +++ K+ VP+ I+Y I+GLC+A E
Sbjct: 677 LLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLE 736
Query: 318 EAMD-FLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
+A F + + ++ IP+ TY IL+ GC + + + M ++G P+ +N+L
Sbjct: 737 DARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNAL 796
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
+ C+ + A +LL K+ + G P + YN LI G+ + ++ + + L E +
Sbjct: 797 IKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVA--EAMRLKE----K 850
Query: 437 MLEVGVV 443
M+E G+V
Sbjct: 851 MIEKGLV 857
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 278 LCKAGKWRDALTL----IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIP 333
LCKAGK DA L + + F+PD YT +I G A +A + M IP
Sbjct: 729 LCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIP 788
Query: 334 NVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLL 393
N+VTY L+ G + + R +R+L + +G P+ +N+L+ +S + + A +L
Sbjct: 789 NIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLK 848
Query: 394 KKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLE----LAETAYSEM 437
+KM++ G G G+ D+P VL+ L T EM
Sbjct: 849 EKMIEKGLVRG--------SDKQGDVDIPKEVVLDPEVKLGSTGVIEM 888
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 124/325 (38%), Gaps = 44/325 (13%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ VL+ YC+ G A+ + + G + + N+L+ + ++ +L A + M
Sbjct: 333 MYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM 392
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISG------- 309
++ D T C+AG +AL L + ++E VP + Y ++ G
Sbjct: 393 NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAF 452
Query: 310 ------------------------LCEASL----FEEAMDFLNRMRANSCIPNVVTYRIL 341
L EA F EAM + A + + +T ++
Sbjct: 453 HDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVM 512
Query: 342 LCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGC 401
+ G + +++ K IL + + C P+ + +L H Y + + A+ + + M + G
Sbjct: 513 ISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGI 572
Query: 402 QPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGK 461
P +YN LI G L + L + E+ G+ C +G
Sbjct: 573 FPTIEMYNTLISGAFKYRHLNKVADLVI------ELRARGLTPTVATYGALITGWCNIGM 626
Query: 462 FEKAFNVIREMMSKGFIPDIGTYSK 486
+KA+ EM+ KG ++ SK
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSK 651
>AT2G26790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11425270-11427669 REVERSE
Length = 799
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 170/428 (39%), Gaps = 73/428 (17%)
Query: 98 LISNAILNNDD---GFGSKTQKFLRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQI 154
LI L DD G + F + + K +ES++ E+ E+G ++A
Sbjct: 271 LIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEM------EEIGFGLDVYA---- 320
Query: 155 GYSHTQAVYNALLEMIESTNNNSNDRIPEQ--FLREIKDEDKEVLGKLLNVLIRKYCQNG 212
L +I+ N N +PE FL ++ + +V +++++++ YC+
Sbjct: 321 -----------CLAVIDRYCKNMN--LPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMD 367
Query: 213 LWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLG 272
+ ALE+ +D R+ YN + +++ A+ + +EM + G D
Sbjct: 368 MCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYT 427
Query: 273 CFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRAN 329
C GK DAL LI++ PD I Y ++SGL EE ++ RM+A
Sbjct: 428 TLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAE 487
Query: 330 SCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYA 389
PN VT +++ G +++ + S + + C P S V YC + A
Sbjct: 488 GPKPNAVTNSVIIEGLCFARKVKEAEDFFS-SLEQKC---PENKASFVKGYCEAGLSKKA 543
Query: 390 YK--------------------------------LLKKMVKCGCQPGYVVYNILIGGICG 417
YK +LKKM +PG + +IG C
Sbjct: 544 YKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCK 603
Query: 418 NEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGF 477
++ VL + M+E G++ + + C + + +KA ++ +M +G
Sbjct: 604 LNNVREAQVL------FDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGI 657
Query: 478 IPDIGTYS 485
PD+ TY+
Sbjct: 658 KPDVVTYT 665
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 131/348 (37%), Gaps = 44/348 (12%)
Query: 180 RIPEQF--LREIKDEDKEVLGKLLN--VLIRKYCQNGLWNAALEELGRLKDFGYKASRLT 235
R+ E F L+E+KD + ++ ++N LI YC G AL+ + + G +T
Sbjct: 403 RVEEAFELLQEMKD--RGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLIT 460
Query: 236 YNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLG------CFAHSL----------- 278
YN LV R + ++ M G ++ T CFA +
Sbjct: 461 YNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE 520
Query: 279 --------------CKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLN 324
C+AG + A + E+ +Y K+ LC E+A D L
Sbjct: 521 QKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLK 580
Query: 325 RMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSR 384
+M A P ++ + + + + M+ G P + ++H YCR
Sbjct: 581 KMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLN 640
Query: 385 DYSYAYKLLKKMVKCGCQPGYVVYNILIGGI--CGNEDLPSMDVL-ELAETAYSEMLE-- 439
+ A L + M + G +P V Y +L+ E + V E+ + SE+L
Sbjct: 641 ELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREF 700
Query: 440 --VGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
G+ L+ V + C + E+A + M+ G PD+ Y+
Sbjct: 701 SAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYT 748
>AT1G63630.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23587613-23588220 FORWARD
Length = 152
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Query: 298 PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRI 357
P TI Y MI G C+ ++A L+ M + C P+VVT+ L+ G + K++ I
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 358 LSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICG 417
M G + + +L+H +C+ D A LL +M+ CG P Y+ ++ ++ G+C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 418 NEDL-PSMDVLELAETAYSEMLE 439
++L + +LE + + LE
Sbjct: 128 KKELRKAFAILEDLQKSEDHHLE 150
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 367 FPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPS-MD 425
FP+ +NS++ +C+ A ++L M GC P V ++ LI G C + + + M+
Sbjct: 7 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 426 VLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+ + EM G+V N V + C VG + A +++ EM+S G PD T+
Sbjct: 67 I-------FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF 118
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 330 SCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYA 389
S P +TY ++ G ++ ++ KR+L M +GC P F++L++ YC+++
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 390 YKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNV 449
++ +M + G V Y LI G C DL + A+ +EM+ GV + +
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDA------AQDLLNEMISCGVAPDYITF 118
Query: 450 SNFARCLCGVGKFEKAFNVIREM 472
LC + KAF ++ ++
Sbjct: 119 HCMLAGLCSKKELRKAFAILEDL 141
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD
Length = 831
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 147/337 (43%), Gaps = 21/337 (6%)
Query: 152 RQIGYSHTQAVYNALLEMIESTNN-NSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQ 210
++ G T + +N L++ + R+ + LR DE + + N+L++ +C
Sbjct: 416 KESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLR---DEMLQPNDRTCNILVQAWCN 472
Query: 211 NGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTA--YLVHREMSNLGYSMDS 268
A + +++ +G K +T+N L + R TA ++ R + N +
Sbjct: 473 QRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHN-KVKPNV 531
Query: 269 FTLGCFAHSLCKAGKWRDALTLIEKEEFV---PDTILYTKMISGLCEASLFEEAMDFLNR 325
T G + C+ GK +AL + + + P+ ++ +I G + + + ++
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 591
Query: 326 MRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRD 385
M P+VVT+ L+ + RC+ I + M+ G P F+ L Y R+ +
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 386 YSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLN 445
A ++L +M K G +P V+Y +I G C S ++ A Y +M G+V
Sbjct: 652 PEKAEQILNQMRKFGVRPNVVIYTQIISGWC------SAGEMKKAMQVYKKM--CGIVGL 703
Query: 446 KVNVSNFARCLCGVGKFE---KAFNVIREMMSKGFIP 479
N++ + + G G+ + KA ++++M K +P
Sbjct: 704 SPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 112/293 (38%), Gaps = 60/293 (20%)
Query: 199 KLLNVLI---RKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLV 255
KL+N LI R + ++N +EE G+K S +TY LV R +
Sbjct: 324 KLMNGLIERGRPQEAHSIFNTLIEE-------GHKPSLITYTTLVTALTRQKHF------ 370
Query: 256 HREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASL 315
HSL ++ +EK PDTIL+ +I+ E+
Sbjct: 371 --------------------HSLL------SLISKVEKNGLKPDTILFNAIINASSESGN 404
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCF-PSPGIFN 374
++AM +M+ + C P T+ L+ G + +L R+L +M+ + P+ N
Sbjct: 405 LDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCN 464
Query: 375 SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL------IGGICGNEDLPSMDVLE 428
LV A+C R A+ ++ KM G +P V +N L IG C ED+
Sbjct: 465 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDM------- 517
Query: 429 LAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDI 481
ML V N C GK E+A M G P++
Sbjct: 518 ----IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNL 566
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 5/182 (2%)
Query: 304 TKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIM 363
TK+++GL E +EA N + P+++TY L+ R+K ++S +
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEK 382
Query: 364 EGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPS 423
G P +FN++++A S + A K+ +KM + GC+P +N LI G L
Sbjct: 383 NGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 424 MDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGT 483
L L EML+ N + + C K E+A+N++ +M S G PD+ T
Sbjct: 443 SSRL-LDMMLRDEMLQP----NDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 484 YS 485
++
Sbjct: 498 FN 499
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 125/292 (42%), Gaps = 11/292 (3%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLD-TAYLVHRE 258
L N +I ++G + A++ ++K+ G K + T+N L+ + + KL+ ++ L+
Sbjct: 391 LFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM 450
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLCEASL 315
+ + + T + C K +A ++ K + PD + + +
Sbjct: 451 LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGS 510
Query: 316 FEEAMD-FLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFN 374
A D + RM N PNV T ++ G + ++ R M G P+ +FN
Sbjct: 511 TCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFN 570
Query: 375 SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAY 434
SL+ + D +++ M + G +P V ++ L+ S+ ++ E Y
Sbjct: 571 SLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNA------WSSVGDMKRCEEIY 624
Query: 435 SEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYSK 486
++MLE G+ + S A+ G+ EKA ++ +M G P++ Y++
Sbjct: 625 TDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQ 676
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 4/174 (2%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ N LI+ + + E + +++FG K +T++ L+ + + ++ +M
Sbjct: 568 VFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDM 627
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLF 316
G D A +AG+ A L + K P+ ++YT++ISG C A
Sbjct: 628 LEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEM 687
Query: 317 EEAMDFLNRMRANSCI-PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPS 369
++AM +M + PN+ TY L+ G KQ + + +L M + P+
Sbjct: 688 KKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPT 741
>AT1G51965.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19312078-19314145 REVERSE
Length = 650
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 139/321 (43%), Gaps = 45/321 (14%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAE----KLDT------ 251
N L++ + + + A++ R+ + G + + TY +L++ L AE +LD
Sbjct: 309 NTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTY-SLLLNLLVAEGQLVRLDGVVEISK 367
Query: 252 --------AYLVHREMSNLGYSMDSFTLGC----------------FAHSLCKAGKWRDA 287
+YLV R +S LG+ ++ L C SLC AGK +A
Sbjct: 368 RYMTQGIYSYLV-RTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEA 426
Query: 288 LTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCG 344
+ ++ K + V DT++Y + S L + D +M+ + P++ TY IL+
Sbjct: 427 IEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIAS 486
Query: 345 CLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPG 404
R ++ I + C P +NSL++ ++ D A+ K+M + G P
Sbjct: 487 FGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPD 546
Query: 405 YVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEK 464
V Y+ L+ E + +E+A + + EML G N V + CL G+ +
Sbjct: 547 VVTYSTLM------ECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Query: 465 AFNVIREMMSKGFIPDIGTYS 485
A ++ +M +G PD TY+
Sbjct: 601 AVDLYSKMKQQGLTPDSITYT 621
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 154/394 (39%), Gaps = 54/394 (13%)
Query: 131 AEVLNLVKNPELGIKFFIWAGRQIGYSHTQA-VYNALLEMIESTNNNSNDRIPEQF--LR 187
+E+L + +P L ++FF YS +YN ++ ++ +N +P++F +R
Sbjct: 103 SEILKSLNSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSN------LPDRFDRVR 156
Query: 188 EIKDE--DKEVLGKL--LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF 243
I D V G + +N+LI + L +K + K + TY L+ +
Sbjct: 157 SILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLR---LVKKWDLKMNSFTYKCLLQAY 213
Query: 244 LRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILY 303
LR+ A+ V+ E+ G+ +D F +L K K ++K D Y
Sbjct: 214 LRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRRDEYTY 273
Query: 304 TKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIM 363
T MI + +EA+ N M NVV Y L+ + K + + ++ S M+
Sbjct: 274 TIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVE 333
Query: 364 EGCFP--------------------------------SPGIFNSLVHAYCRSRDYSYAYK 391
GC P + GI++ LV + S A++
Sbjct: 334 TGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHR 393
Query: 392 LLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSN 451
L M + Y ++ +CG +++ +E+ S++ E GVV + + +
Sbjct: 394 LFCDMWSFPVKGERDSYMSMLESLCGAGK--TIEAIEM----LSKIHEKGVVTDTMMYNT 447
Query: 452 FARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
L + + ++ +M G PDI TY+
Sbjct: 448 VFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYN 481
>AT3G02650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:566271-569865 FORWARD
Length = 1077
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 173/414 (41%), Gaps = 30/414 (7%)
Query: 94 NDAVLISNAILNNDDGFGSKTQKFLRQFREKLSESLVAE--------VLNLVKNPELG-- 143
++ V I N + DD LR E L L A V+ + ++P +
Sbjct: 614 SEIVAIENEVYQFDDEKLESVLSLLRSDEESLEFGLNALNVDLHLDFVVRVFESPGISGK 673
Query: 144 --IKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLG--- 198
I+F WA + + T ++ +LL I S + ++EI + KE G
Sbjct: 674 NLIRFLKWATQNEEITVTTSLVESLLVAIASDTRRMDAYGLWDLVKEIGE--KESCGVLN 731
Query: 199 -KLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHR 257
++LN LI + + G AA + + ++FG+ + TY + + +D A V
Sbjct: 732 LEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCE 791
Query: 258 EMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE----KEEFVPDTILYTKMISGLCE- 312
+M G + +G CK GK +A ++ E KE+ +P + T +I+ LC+
Sbjct: 792 KMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVAT-LITALCKN 850
Query: 313 ASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGI 372
A + L + + + + ++ R + + K +L MI +G P +
Sbjct: 851 DGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAV 910
Query: 373 FNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAET 432
FN +VHA ++ D A ++LK M G +P Y ++I G +++ A+
Sbjct: 911 FNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKG------GMMDEAQE 964
Query: 433 AYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYSK 486
+E + L+ V R C + ++++A ++ EM G P+ Y+K
Sbjct: 965 ILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNK 1018
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 10/177 (5%)
Query: 276 HSLCKAGKWRDA----LTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSC 331
HSLC+ +DA L +I K P ++ ++ + +EA + L M +
Sbjct: 881 HSLCRMRNVKDAKALLLDMISKGP-APGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGL 939
Query: 332 IPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYK 391
P+V TY +++ G + + + IL+ + SP +++L+ YC+ +Y A K
Sbjct: 940 KPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALK 999
Query: 392 LLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVN 448
LL +M + G QP YN LI C L ++D E AE + EM + G+ LN ++
Sbjct: 1000 LLNEMDRFGVQPNADEYNKLIQSFC----LKALD-WEKAEVLFEEMKQKGLHLNAIS 1051
>AT3G18110.1 | Symbols: EMB1270 | EMB1270 (embryo defective 1270) |
chr3:6204940-6209691 REVERSE
Length = 1429
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 4/218 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N +I Y + GL A L+ G+ +TYN+L+ F R + V+++M
Sbjct: 336 NAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQK 395
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV----PDTILYTKMISGLCEASLFE 317
+G+ D T H K G+ AL L + + + PD I YT +I L +A+
Sbjct: 396 MGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTV 455
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
EA ++ M P + TY L+CG + + + S M+ G P ++ ++
Sbjct: 456 EAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVML 515
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
R + A+ L + M+ G P Y +Y ++I G+
Sbjct: 516 DVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGL 553
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 145/363 (39%), Gaps = 58/363 (15%)
Query: 169 MIESTNNNSNDRIPEQF----LREIKDEDKEVLGKLLNVLIRKYCQNGLWNA---ALEEL 221
+++S S R E F LR + ++ +L VL G WN A+E
Sbjct: 162 VVKSVGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVL-------GRWNQESLAVEIF 214
Query: 222 GRLK-DFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCK 280
R + G + YNA++ V+ R+ K A + M G D + ++ K
Sbjct: 215 TRAEPTVGDRVQ--VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLK 272
Query: 281 AGKWR-----DALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNV 335
+G + L ++ PD I Y ++S S + A+ M A+ C P++
Sbjct: 273 SGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDL 332
Query: 336 VTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKK 395
TY ++ R +R+ + ++G FP +NSL++A+ R R+ ++ ++
Sbjct: 333 WTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQ 392
Query: 396 MVKCGCQPGYVVYNILI-------------------GGICG-NEDLPSMDVL-------- 427
M K G + YN +I G+ G N D + VL
Sbjct: 393 MQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKAN 452
Query: 428 ELAETA--YSEMLEVGVVLNKVNVSNFARCLCG---VGKFEKAFNVIREMMSKGFIPDIG 482
E A SEML+VG+ K + ++ +CG GK E+A + M+ G PD
Sbjct: 453 RTVEAAALMSEMLDVGI---KPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNL 509
Query: 483 TYS 485
YS
Sbjct: 510 AYS 512
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 121/312 (38%), Gaps = 32/312 (10%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
+I Y + LW A +G L+ G T+N+L+ + + + A + M G
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTK---MISGLCEASLFEEAM 320
S ++ H+LC G+ + ++E+ + + I + M+ A E
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVK 877
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
+ M+A +P + YR+++ + K++ + ++S M I+NS++ Y
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDL----------------PSM 424
DY ++ +++ + G +P YN LI C + P +
Sbjct: 938 TAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKL 997
Query: 425 DV-------------LELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIRE 471
D LE AE + E+L G+ L++ + G KA +++
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 472 MMSKGFIPDIGT 483
M + G P + T
Sbjct: 1058 MKNAGIEPTLAT 1069
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 113/264 (42%), Gaps = 6/264 (2%)
Query: 152 RQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQN 211
+ GY T +Y ++E++ R E + E+++ + +V + N +++ Y
Sbjct: 884 KAAGYLPTIRLYRMMIELL---CKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAI 940
Query: 212 GLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTL 271
+ ++ R+K+ G + TYN L+I++ R + + YL+ ++M NLG T
Sbjct: 941 EDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTY 1000
Query: 272 GCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRA 328
+ K A L E+ + D Y M+ ++ +A L M+
Sbjct: 1001 KSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKN 1060
Query: 329 NSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSY 388
P + T +L+ +++LS + + ++S++ AY RS+DY+
Sbjct: 1061 AGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNS 1120
Query: 389 AYKLLKKMVKCGCQPGYVVYNILI 412
+ L +M K G +P + ++ +
Sbjct: 1121 GIERLLEMKKEGLEPDHRIWTCFV 1144
>AT5G50280.1 | Symbols: EMB1006 | EMB1006 (embryo defective 1006) |
chr5:20459238-20461504 FORWARD
Length = 723
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 12/268 (4%)
Query: 224 LKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGK 283
++D G K S TYN L+ + R + D + REM +LG + + C + + K
Sbjct: 405 MRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKK 464
Query: 284 WRD----ALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYR 339
D A ++K P + YT +I + E+A M P+V TY
Sbjct: 465 MSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYT 524
Query: 340 ILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKC 399
+L R G+ I LM+ E + +N+L+ + + Y A ++ + K
Sbjct: 525 SVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKM 584
Query: 400 GCQPGYVVYNILIGGIC-GNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCG 458
G QP + YN+L+ G +D +L+ EM + + + + S
Sbjct: 585 GLQPSVMTYNMLMNAYARGGQDAKLPQLLK-------EMAALNLKPDSITYSTMIYAFVR 637
Query: 459 VGKFEKAFNVIREMMSKGFIPDIGTYSK 486
V F++AF + M+ G +PD +Y K
Sbjct: 638 VRDFKRAFFYHKMMVKSGQVPDPRSYEK 665
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 116/265 (43%), Gaps = 9/265 (3%)
Query: 152 RQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQN 211
R G + A YN L++ + I E LRE++D E K LI Y +
Sbjct: 406 RDKGLKPSAATYNILMD---AYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRT 462
Query: 212 G-LWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGY--SMDS 268
+ + A + R+K G K S +Y AL+ + + + AY EM G S+++
Sbjct: 463 KKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVET 522
Query: 269 FT--LGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRM 326
+T L F S GK + L+ +E+ I Y ++ G + L+ EA D ++
Sbjct: 523 YTSVLDAFRRS-GDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEF 581
Query: 327 RANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDY 386
P+V+TY +L+ R Q + ++L M P ++++++A+ R RD+
Sbjct: 582 SKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDF 641
Query: 387 SYAYKLLKKMVKCGCQPGYVVYNIL 411
A+ K MVK G P Y L
Sbjct: 642 KRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 9/254 (3%)
Query: 236 YNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGK-WRDALTLIEK- 293
YNA + +++ D A+ V+ M + D+ T +L KAG+ ++ + EK
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 294 -EEFVP-DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQL 351
E+ V ++ ++ C+ L EEA+ M N + Y L+ + +
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 352 GRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
+ + + M +G PS +N L+ AY R LL++M G +P Y L
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCL 455
Query: 412 IGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIRE 471
I + + M A A+ M +VG+ + + + G EKA+ E
Sbjct: 456 ISAYGRTKKMSDM-----AADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEE 510
Query: 472 MMSKGFIPDIGTYS 485
M +G P + TY+
Sbjct: 511 MCKEGIKPSVETYT 524
>AT1G13800.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:4731056-4733707 REVERSE
Length = 883
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 122/287 (42%), Gaps = 18/287 (6%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ NVL NGL A E L +++ G K + +T+N ++ + A +LD A + +
Sbjct: 468 IYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEF-VPDTILYTKMISGLCEASLFEE 318
+ D+ + F C AG A + EF +P ++ +T S E +
Sbjct: 528 EHKSRENDASMVKGF----CAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISK 583
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A D L+RM P Y L+ R + + + +++ + P + +++
Sbjct: 584 AQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMIN 643
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
YCR + AY L + M + +P V Y++L+ N D P +D+ EM
Sbjct: 644 TYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL-----NSD-PELDM-------KREME 690
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
V+ + V + C + +K + + ++M + +PD+ TY+
Sbjct: 691 AFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYT 737
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 102/252 (40%), Gaps = 17/252 (6%)
Query: 234 LTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK 293
TY ++ + R + AY + +M D T +S + R+ +E
Sbjct: 636 FTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKRE----MEA 691
Query: 294 EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGR 353
+ +PD + YT MI+ C + ++ M+ +P+VVTY +LL ++ L R
Sbjct: 692 FDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN-KPERNLSR 750
Query: 354 CKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIG 413
+ + P + L+ C+ D A ++ +M++ G P Y LI
Sbjct: 751 EMKAFDVK------PDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIA 804
Query: 414 GICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMM 473
C M L+ A+ + M+E GV + V + C G KA +++EM+
Sbjct: 805 CCC------KMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEML 858
Query: 474 SKGFIPDIGTYS 485
KG P + S
Sbjct: 859 EKGIKPTKASLS 870
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 96/252 (38%), Gaps = 23/252 (9%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
++I YC+ A +K K +TY+ L+ D + REM
Sbjct: 639 TIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL-------NSDPELDMKREMEA 691
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
D + C + L +++ E VPD + YT ++ E +L E
Sbjct: 692 FDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSRE 751
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
M+A P+V Y +L+ + LG KRI MI G P + +L+
Sbjct: 752 -------MKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIA 804
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
C+ A + +M++ G +P V Y LI G C N + A EML
Sbjct: 805 CCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRN------GFVLKAVKLVKEML 858
Query: 439 EVGVVLNKVNVS 450
E G+ K ++S
Sbjct: 859 EKGIKPTKASLS 870
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 120/309 (38%), Gaps = 38/309 (12%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEK--LDTAYLVHREMSN 261
+++ +C G + A E RL+ + + Y L L AEK + A + M
Sbjct: 538 MVKGFCAAGCLDHAFERFIRLE---FPLPKSVYFTL-FTSLCAEKDYISKAQDLLDRMWK 593
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
LG + G + C+ R A E ++ VPD YT MI+ C + ++
Sbjct: 594 LGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQ 653
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A M+ P+VVTY +LL +L + + + ++ P + +++
Sbjct: 654 AYALFEDMKRRDVKPDVVTYSVLLNS---DPELDMKREMEAFDVI----PDVVYYTIMIN 706
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICG---NEDLPSMDV--------- 426
YC D Y L K M + P V Y +L+ + ++ + DV
Sbjct: 707 RYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTV 766
Query: 427 ----------LELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKG 476
L A+ + +M+E GV + + C C +G ++A + M+ G
Sbjct: 767 LIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESG 826
Query: 477 FIPDIGTYS 485
PD+ Y+
Sbjct: 827 VKPDVVPYT 835
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 122/298 (40%), Gaps = 21/298 (7%)
Query: 199 KLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLR------AEKLDTA 252
K LN LI + +G + + ++ G A TY +V R EKL +
Sbjct: 183 KALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSR 242
Query: 253 YLVHREMSNLGYSMDSFTLGCFAHSLCKAGKW-----RDALTLIEKEEFVPDTILYTKMI 307
L+ E N +F G + + + RDA L++K + I Y K++
Sbjct: 243 LLIS-ETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDL---GIAYRKVV 298
Query: 308 SGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCF 367
GLC E+A + M + P+V Y ++ G + + + + + M+ +
Sbjct: 299 RGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKR 358
Query: 368 PSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVL 427
+ I +S++ YC+ ++S AY L K+ + V YN+ L + +
Sbjct: 359 INCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDA------LGKLGKV 412
Query: 428 ELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
E A + EM G+ + +N + C GK AF+++ EM G PDI Y+
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYN 470
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 121/310 (39%), Gaps = 23/310 (7%)
Query: 167 LEMIESTNNNSNDRIPEQFLREIKDE----DKEVLGKLLNVLIRKYCQNGLWNAALEELG 222
L IE N I L+ ++D DK LG ++R C A +
Sbjct: 256 LNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVL 315
Query: 223 RLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAG 282
++ G Y+A++ + + A V +M ++ + C+ G
Sbjct: 316 DMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMG 375
Query: 283 KWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYR 339
+ +A L ++ D + Y L + EEA++ M P+V+ Y
Sbjct: 376 NFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYT 435
Query: 340 ILLCGCLRKKQLGRCKRILSLMI-MEGCFPSPGI--FNSLVHAYCRSRDYSYAYKLLKKM 396
L+ GC + G+C LMI M+G +P I +N L + A++ LK M
Sbjct: 436 TLIGGCCLQ---GKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMM 492
Query: 397 VKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCL 456
G +P YV +N++I G+ D +D E A+ E LE ++ N ++ +
Sbjct: 493 ENRGVKPTYVTHNMVIEGLI---DAGELDKAE----AFYESLEHK---SRENDASMVKGF 542
Query: 457 CGVGKFEKAF 466
C G + AF
Sbjct: 543 CAAGCLDHAF 552
>AT5G40400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G55840.1); Has
18933 Blast hits to 5737 proteins in 174 species: Archae
- 4; Bacteria - 8; Metazoa - 352; Fungi - 335; Plants -
17540; Viruses - 0; Other Eukaryotes - 694 (source: NCBI
BLink). | chr5:16166444-16168276 FORWARD
Length = 610
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 123/293 (41%), Gaps = 24/293 (8%)
Query: 143 GIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREI-----KDEDKEVL 197
I FF W +G Y LL ++ S+ + QFL E+ K E+ +V
Sbjct: 96 AITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFP---LAMQFLCELIELTSKKEEVDVF 152
Query: 198 GKLL-------------NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFL 244
L+ ++L++ Y + GL + D G+ S +T N L+ L
Sbjct: 153 RVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLL 212
Query: 245 RAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWR---DALTLIEKEEFVPDTI 301
+ + ++ + V+ M +G +++T + C +R D L +E+E F PD +
Sbjct: 213 KLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLV 272
Query: 302 LYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLM 361
Y ++S C +EA M +P++VTY L+ G + ++ + M
Sbjct: 273 TYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRM 332
Query: 362 IMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG 414
+ G P +N+L++AYC+ + KLL +M+ P +++ G
Sbjct: 333 VDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEG 385
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 104/286 (36%), Gaps = 33/286 (11%)
Query: 228 GYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA 287
G + T+N L VF +M G+ D T S C+ G+ ++A
Sbjct: 231 GIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290
Query: 288 LTLIE---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCG 344
L + + VPD + YT +I GLC+ EA +RM P+ ++Y L+
Sbjct: 291 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA 350
Query: 345 CLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPG 404
++ + + K++L M+ P +V + R A + ++ +
Sbjct: 351 YCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIP 410
Query: 405 YVVYNILIGGIC-------------------GNEDLPSM-----------DVLELAETAY 434
+ V + LI +C G+E P D +E A
Sbjct: 411 FEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLK 470
Query: 435 SEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
++ VL+ CLC +G+ +A +++ EM PD
Sbjct: 471 GKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPD 516
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 6/187 (3%)
Query: 299 DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRIL 358
D +++ ++ G + L EE + + +VVT LL G L+ + C ++
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 359 SLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
S+M G P+ FN L + +C ++ L+KM + G +P V YN L+ C
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 419 EDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFI 478
L A Y M VV + V ++ + LC G+ +A M+ +G
Sbjct: 285 GRLKE------AFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIK 338
Query: 479 PDIGTYS 485
PD +Y+
Sbjct: 339 PDCMSYN 345
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 14/201 (6%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI YC+ G+ + + L + R T +V F+R +L +A E+
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRR 404
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK------EEFVPDTILYTKMISGLCEASL 315
L + SLC+ GK A L+++ E P+T Y +I L
Sbjct: 405 LKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPET--YNNLIESLSRCDA 462
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIM---EGCFPSPGI 372
EEA+ +++ + + + TYR L+ GCL + +GR + SLM P I
Sbjct: 463 IEEALVLKGKLKNQNQVLDAKTYRALI-GCLCR--IGRNREAESLMAEMFDSEVKPDSFI 519
Query: 373 FNSLVHAYCRSRDYSYAYKLL 393
+LV+ YC+ D+ A +LL
Sbjct: 520 CGALVYGYCKELDFDKAERLL 540
>AT1G05600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1672161-1673675 FORWARD
Length = 504
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 118/259 (45%), Gaps = 22/259 (8%)
Query: 191 DEDKEVLGKLLNVLIR--KYC----QNGLWNAALEELGRLKDF-------GYKASRLTYN 237
D+ E+LGK+L ++ K C + G W ++ E + R+K G +Y+
Sbjct: 243 DDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYS 302
Query: 238 ALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE--- 294
A+ KL V M + G+ F G +LC+AGK ++A+++I KE
Sbjct: 303 AMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQ 362
Query: 295 -EFVPDTILYTKMISGLCEASLFEEAMDFLNRM-RANSCIPNVVTYRILLCGCLRKKQLG 352
+P +Y +I GLC+ EA+ +L +M + SC+ N TY+ L+ G R Q
Sbjct: 363 GHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFL 422
Query: 353 RCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILI 412
+++ M+++ FP ++ ++ C A L++MV P V+ L
Sbjct: 423 EASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALA 482
Query: 413 GGICGNEDLPSMDVLELAE 431
+C ++DV+E+ E
Sbjct: 483 ESVC----FCAIDVVEILE 497
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 176/444 (39%), Gaps = 94/444 (21%)
Query: 125 LSESLVAEVLNLVKNPELGIKFFIWAGRQI-GYSHTQAVYNALLEMIESTNNNSNDRIPE 183
L+ SL++++L KNP +K F A + Y H +VY +++++ +N R+ E
Sbjct: 10 LTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSN-----RVLE 64
Query: 184 Q--FLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDF-------------- 227
+ +K++ E + +IR + + G A+ L +F
Sbjct: 65 MKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQ 124
Query: 228 --------------------GYKA-SRLT-YNALVIVFLRAEKLDTAYLVHREMSNLGYS 265
G++ SR+T N L+ V + + D A V +EM+ G
Sbjct: 125 EMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCY 184
Query: 266 MDSFTLGCFAHSLCKAGKWRDALTL-------IEKEEFVPDTILYTKMISGLCEASLFEE 318
D + C GK +A L I ++ D ++Y ++ LC+A ++
Sbjct: 185 PDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDD 244
Query: 319 AMDFLNR-----MRA--------------------------------NSCIPNVVTYRIL 341
A++ L + ++A IP + +Y +
Sbjct: 245 AIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAM 304
Query: 342 LCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLL-KKMVKCG 400
+ +L + +L M +G P+P I+ + V A CR+ A ++ K+M++
Sbjct: 305 ATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGH 364
Query: 401 CQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVG 460
C P VYN+LI G+C +D SM+ + + + V V N+ LC G
Sbjct: 365 CLPTVGVYNVLIKGLC--DDGKSMEAVGYLKKMSKQ---VSCVANEETYQTLVDGLCRDG 419
Query: 461 KFEKAFNVIREMMSKGFIPDIGTY 484
+F +A V+ EM+ K P + TY
Sbjct: 420 QFLEASQVMEEMLIKSHFPGVETY 443
>AT2G15980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:6951349-6952845 REVERSE
Length = 498
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 157/394 (39%), Gaps = 50/394 (12%)
Query: 133 VLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSN-DRIPEQFLR-EIK 190
L L NP L ++FF++ R SH + L+ ++ + S+ I LR
Sbjct: 78 TLCLRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSRSRLKSHASEIIRLALRLAAT 137
Query: 191 DEDKEVLGKLLNVLIRKYCQNGLW-----------------NAALEELGRLKDFGYKASR 233
DED++ + K+ LI+ Y + G + A+ + +L+ G A
Sbjct: 138 DEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQI 197
Query: 234 LTYNALVIVFLRAEKLDTAYLVHREMSNLG-YSMD------------SFTLGCFAHSLCK 280
T NAL+ R Y ++RE+ L S+D + T S +
Sbjct: 198 STCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYR 257
Query: 281 AGK-------WRDALTLIEKEEFV---PDTILYTKMISGLCEASLFEEAMDFLNRMRANS 330
G+ WR E EE V P+ Y ++ C L EA M+
Sbjct: 258 EGETEMVERIWR------EMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRG 311
Query: 331 CIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAY 390
+ ++V Y ++ G ++ + K + M ++G + + LV+ YC++ D
Sbjct: 312 VVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGL 371
Query: 391 KLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVS 450
+ ++M + G + + L+ G+C + D V+E A+ + E ++
Sbjct: 372 VVYREMKRKGFEADGLTIEALVEGLCDDRD--GQRVVEAADIVKDAVREAMFYPSRNCYE 429
Query: 451 NFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+ LC GK ++A N+ EM+ KGF P TY
Sbjct: 430 LLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETY 463
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 13/153 (8%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N +I C N A E + G + + LTY LV + +A +D+ +V+REM
Sbjct: 320 NTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKR 379
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTI----------LYTKMISGLC 311
G+ D T+ LC RD ++E + V D + Y ++ LC
Sbjct: 380 KGFEADGLTIEALVEGLCDD---RDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLC 436
Query: 312 EASLFEEAMDFLNRMRANSCIPNVVTYRILLCG 344
E + A++ M P+ TYR + G
Sbjct: 437 EDGKMDRALNIQAEMVGKGFKPSQETYRAFIDG 469
>AT1G07740.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2399117-2400496 REVERSE
Length = 459
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 141/345 (40%), Gaps = 39/345 (11%)
Query: 114 TQKFLRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALL-EMIES 172
T KF R+ E++ L +++PE + F +++G+ H Y++L+ ++ +S
Sbjct: 39 THKFTRKPWEEVP---FLTDLKEIEDPEEALSLF-HQYQEMGFRHDYPSYSSLIYKLAKS 94
Query: 173 TNNNSNDRI------------PEQFLREIK--------DEDKEVLGKL-----------L 201
N ++ D+I F+ I+ D+ +V K+ L
Sbjct: 95 RNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSL 154
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI NG A KD + + +++N L+ FL + A V EM
Sbjct: 155 NTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLE 214
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
+ T LC+ A +L+E K+ P+ + + ++ GLC + E
Sbjct: 215 MEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNE 274
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A + M C P +V Y IL+ ++ ++ K +L M P I+N LV+
Sbjct: 275 AKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVN 334
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPS 423
C AY++L +M GC+P Y ++I G C ED S
Sbjct: 335 HLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDS 379
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 96/254 (37%), Gaps = 38/254 (14%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
N+LI+ + W AA + + + + S +TYN+L+ R + + A + +M
Sbjct: 189 FNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMI 248
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLI----------------------------- 291
++ T G LC G++ +A L+
Sbjct: 249 KKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRID 308
Query: 292 ---------EKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILL 342
+K PD ++Y +++ LC EA L M+ C PN TYR+++
Sbjct: 309 EAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMI 368
Query: 343 CGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQ 402
G R + +L+ M+ P+P F +V + + +A +L+ M K
Sbjct: 369 DGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLS 428
Query: 403 PGYVVYNILIGGIC 416
G + L+ +C
Sbjct: 429 FGSGAWQNLLSDLC 442
>AT1G53330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:19896027-19897442 FORWARD
Length = 471
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 11/288 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N+LI Q+G ++ AL+ + K + +T+ L+ + ++ A + +M
Sbjct: 156 NILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLK 215
Query: 262 L-GYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE---EFVPDTILYTKMISGLCEASLFE 317
+ G +LC+ G+ A L ++ + D +Y+ +IS L +A
Sbjct: 216 VYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSN 275
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
E L M C P+ VTY +L+ G + R+L M+ +G P +N ++
Sbjct: 276 EVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMIL 335
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
+ R + + A L + M + GC P + Y I+ G+C E L E A EM
Sbjct: 336 GVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLC--EGLQ----FEEAAVILDEM 389
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
L G + + F + LC GK E VI + +G D +S
Sbjct: 390 LFKGYKPRRDRLEGFLQKLCESGKLEILSKVISS-LHRGIAGDADVWS 436
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 110/267 (41%), Gaps = 15/267 (5%)
Query: 219 EELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSL 278
E L + +FG K TYN L+ ++ D A + EM T G H L
Sbjct: 139 ERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGL 197
Query: 279 CKAGKWRDALTLIEKEEFV------PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCI 332
CK + ++AL + K + + P +Y +I LC+ A +
Sbjct: 198 CKDSRVKEALKM--KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIK 255
Query: 333 PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKL 392
+ Y L+ ++ + IL M +GC P +N L++ +C D A ++
Sbjct: 256 VDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRV 315
Query: 393 LKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNF 452
L +MV+ G +P + YN+++G + E A + +M G + ++
Sbjct: 316 LDEMVEKGLKPDVISYNMILGVFF------RIKKWEEATYLFEDMPRRGCSPDTLSYRIV 369
Query: 453 ARCLCGVGKFEKAFNVIREMMSKGFIP 479
LC +FE+A ++ EM+ KG+ P
Sbjct: 370 FDGLCEGLQFEEAAVILDEMLFKGYKP 396
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 93/223 (41%), Gaps = 42/223 (18%)
Query: 298 PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRI 357
PD Y +I G ++ F++A+ + M P VT+ L+ G + ++ ++
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 358 LSLMI-MEGCFPSPGIFNSLVHAYCRSRDYSYAYKL------------------------ 392
M+ + G P+ I+ SL+ A C+ + S+A+KL
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 393 -----------LKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVG 441
L++M + GC+P V YN+LI G C D S A EM+E G
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSES------ANRVLDEMVEKG 323
Query: 442 VVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+ + ++ + + K+E+A + +M +G PD +Y
Sbjct: 324 LKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSY 366
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 333 PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKL 392
P+ TY IL+ GC + ++ M+ + P+ F +L+H C+ A K+
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 393 LKKMVKC-GCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSN 451
M+K G +P +Y LI +C +L +L + AY ++V + +S+
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSF--AFKLKDEAYEGKIKVDAAIYSTLISS 267
Query: 452 FARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ G+ + ++ EM KG PD TY+
Sbjct: 268 LIK----AGRSNEVSMILEEMSEKGCKPDTVTYN 297
>AT2G38420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16091120-16092454 FORWARD
Length = 444
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 134/313 (42%), Gaps = 54/313 (17%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRA-EKLDTAYLVHREMSNL 262
+I Y +G A+E ++ +F S T NAL++V +R + L+ + + +
Sbjct: 105 VIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRM 164
Query: 263 GYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLC---EASLF 316
G ++ T G +LC+ G+ A L+ ++ + D LY++++S +C ++S F
Sbjct: 165 GVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCF 224
Query: 317 E----------------------------------EAMDFLNRMRANSCIPNVVTYRILL 342
+ E + LN+M+ + P++V Y I+L
Sbjct: 225 DVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVL 284
Query: 343 CGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQ 402
G + + + ++ +++ G P +N ++ C+ D A K++ M K G +
Sbjct: 285 QGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSE 344
Query: 403 PGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNK----VNVSNFA---RC 455
P V YNILI + DL A+T + EM GV N + +S +
Sbjct: 345 PNVVTYNILIKALVKAGDLSR------AKTLWKEMETNGVNRNSHTFDIMISAYIEVDEV 398
Query: 456 LCGVGKFEKAFNV 468
+C G E+AFN+
Sbjct: 399 VCAHGLLEEAFNM 411
>AT2G31400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:13387201-13390550 REVERSE
Length = 918
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 113/289 (39%), Gaps = 10/289 (3%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAE-KLDTAYLVHREM 259
+ LI Y ++GL A+ +K++G + + +TYNA++ + + EM
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLF 316
G D T + G W A L ++ D Y ++ +C+
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
+ A + L +M +PNVV+Y ++ G + + + M G +N+L
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
+ Y + A +L++M G + V YN L+GG + + ++E
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG------KQGKYDEVKKVFTE 504
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
M V+ N + S G +++A + RE S G D+ YS
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYS 553
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 3/221 (1%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
N L+ + GLW AA + + + +YN L+ + ++D A+ + +M
Sbjct: 342 FNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMP 401
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVP---DTILYTKMISGLCEASLFE 317
+ + KAG++ +AL L + ++ D + Y ++S + E
Sbjct: 402 VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSE 461
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
EA+D L M + +VVTY LL G ++ + K++ + M E P+ +++L+
Sbjct: 462 EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
Y + Y A ++ ++ G + V+Y+ LI +C N
Sbjct: 522 DGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 122/302 (40%), Gaps = 18/302 (5%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N L+ C+ G + A E L ++ + ++Y+ ++ F +A + D A + EM
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV---PDTILYTKMISGLCEASLFEE 318
LG ++D + K G+ +AL ++ + V D + Y ++ G + ++E
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
M+ +PN++TY L+ G + I G ++++L+
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI--------------CGNEDLPSM 424
A C++ A L+ +M K G P V YN +I G+ S
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSS 617
Query: 425 DVLELAETAYSEMLEV-GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGT 483
+ L ET + ++++ G + + N C G+ + V R+M P++ T
Sbjct: 618 ALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVT 677
Query: 484 YS 485
+S
Sbjct: 678 FS 679
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 106/252 (42%), Gaps = 10/252 (3%)
Query: 237 NALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEK 293
+A++ R K+ A + GY + + ++G +A+++ +++
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 294 EEFVPDTILYTKMISGLCEASL-FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLG 352
P+ + Y +I + + F++ F + M+ N P+ +T+ LL C R
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 353 RCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILI 412
+ + M +N+L+ A C+ A+++L +M P V Y+ +I
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 413 GGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREM 472
G + A + EM +G+ L++V+ + VG+ E+A +++REM
Sbjct: 417 DGFA------KAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Query: 473 MSKGFIPDIGTY 484
S G D+ TY
Sbjct: 471 ASVGIKKDVVTY 482
>AT3G48250.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17870064-17871929 REVERSE
Length = 621
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 162/359 (45%), Gaps = 29/359 (8%)
Query: 101 NAILNNDDGFGSKTQKFLRQFREKLSESLVAEVLN-LVKNPELGIKFFIWAGRQIG---Y 156
+A++ D + + ++ L++ + LS++ V VL L ++P + FF W G Y
Sbjct: 201 SAVVTKGD-WSCEVERELQEMKLVLSDNFVIRVLKELREHPLKALAFFHWVGGGGSSSGY 259
Query: 157 SHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKL-LNVLI---RKYCQNG 212
H+ YNA L ++ N+ + + DE K + L+ I R++ ++
Sbjct: 260 QHSTVTYNAALRVLARPNSVAE-------FWSVVDEMKTAGYDMDLDTYIKVSRQFQKSR 312
Query: 213 LWNAALEELGRLKDFGYKASRLTYNALVIVFLRAE---KLDTAYLVHREMSNLGYSMDSF 269
+ ++ + D +K S + +L++ +L LD + V R+ + G S+
Sbjct: 313 MMAETVKLYEYMMDGPFKPS-IQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKA 371
Query: 270 TLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRM 326
SL G++ +A + + + PD I Y++++ GLC+A EEA L++M
Sbjct: 372 VYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQM 431
Query: 327 RANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDY 386
A C P++ T+ IL+ G + +L + + M+ +G + + L+ + +
Sbjct: 432 EAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKF 491
Query: 387 SYAYKLLKKMVK-CGCQPGYVVYNILIGGICG-NEDLPSMDVLELAET----AYSEMLE 439
A L +MVK +P Y +LI + + ++D+L++ + AY+E +
Sbjct: 492 EGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFD 550
>AT1G02420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:493683-495158 FORWARD
Length = 491
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 133/306 (43%), Gaps = 16/306 (5%)
Query: 125 LSESLVAEVLNLVK----NPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDR 180
LS+ L+ VL V+ NP ++F+ +A G+ H+ + +L ++ N D+
Sbjct: 69 LSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYIL--GRNRKFDQ 126
Query: 181 IPEQFLREIKDEDKEVLG-KLLNVLIRKYCQNGLWNAALEELGRLK----DFGYKASRLT 235
I E L E K +D+ ++ + + V++ + + +E + K DF A
Sbjct: 127 IWE-LLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFDTA---C 182
Query: 236 YNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE 295
+NAL+ + + + A V+ + + + D T + + ++ +
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKH-QFQPDLQTFNILLSGWKSSEEAEAFFEEMKGKG 241
Query: 296 FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCK 355
PD + Y +I C+ E+A +++MR P+V+TY ++ G Q + +
Sbjct: 242 LKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAR 301
Query: 356 RILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
+L M GC+P +N+ + +C +R A KL+ +MVK G P YN+ +
Sbjct: 302 EVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVL 361
Query: 416 CGNEDL 421
DL
Sbjct: 362 SLANDL 367
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 14/189 (7%)
Query: 299 DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRIL 358
DT + ++ LC+ +A + + ++ + P++ T+ ILL G K +
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLK-HQFQPDLQTFNILLSGW---KSSEEAEAFF 234
Query: 359 SLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI--C 416
M +G P +NSL+ YC+ R+ AYKL+ KM + P + Y +IGG+
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 417 GNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKG 476
G D A EM E G + + R C + A ++ EM+ KG
Sbjct: 295 GQPDK--------AREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKG 346
Query: 477 FIPDIGTYS 485
P+ TY+
Sbjct: 347 LSPNATTYN 355
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 120/290 (41%), Gaps = 13/290 (4%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLD--TAYLVHR 257
+ N +I C+ G +L+ LG +KD G + S+ T N I AE+ D A + +
Sbjct: 476 MYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNC--IYGCLAERCDFVGALDLLK 533
Query: 258 EMSNLGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEAS 314
+M G+ LC+ G+ DA L + E F+ + T I GL +
Sbjct: 534 KMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNE 593
Query: 315 LFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFN 374
+ ++ + AN P+V+ Y +L+ + + + + M+ +G P+ +N
Sbjct: 594 GVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYN 653
Query: 375 SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAY 434
S++ +C+ + + +M + P + Y LI G+C + PS + +
Sbjct: 654 SMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCAS-GRPSEAIFR-----W 707
Query: 435 SEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+EM N++ + LC G +A REM K PD Y
Sbjct: 708 NEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 118/285 (41%), Gaps = 8/285 (2%)
Query: 124 KLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPE 183
+L+ +V VLN K L FF WA +Q GY + YNA+ ++ N++ +
Sbjct: 70 ELNTKVVETVLNGFKRWGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLK--- 126
Query: 184 QFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGY-KASRLTYNALVIV 242
+ ++ + + IR GL + A R+++ G + TYN L+
Sbjct: 127 ALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEA 186
Query: 243 FLRAEKLDTAYLVHR--EMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK--EEFVP 298
++ + R EM + G+ D FTL C GK AL++ +
Sbjct: 187 ISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWL 246
Query: 299 DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRIL 358
D + T ++ C+ ++A + + + N TY +L+ G +++ ++ + ++
Sbjct: 247 DEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLF 306
Query: 359 SLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQP 403
M G +++ L+ C+ +D A L ++ + G P
Sbjct: 307 EKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPP 351
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 109/261 (41%), Gaps = 16/261 (6%)
Query: 228 GYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA 287
G+ + Y+ L+ +A + A ++ EM + G T CK G+
Sbjct: 609 GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRG 668
Query: 288 LTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCG 344
L+ I + +E PD I YT +I GLC + EA+ N M+ C PN +T+ L+ G
Sbjct: 669 LSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQG 728
Query: 345 CLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPG 404
+ G M + P ++ SLV ++ S + + + + ++MV G P
Sbjct: 729 LCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPV 788
Query: 405 YVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFA-RCLCGVGKFE 463
V N ++ +++V + AY + ++ N NF R E
Sbjct: 789 SVDRNYML----------AVNVTSDVDYAYKFLSKLSDPPNYG--WNFVIRGFSNSRNPE 836
Query: 464 KAFNVIREMMSKGFIPDIGTY 484
K+ +V +M+ G +PD TY
Sbjct: 837 KSISVYIQMLRFGLLPDHMTY 857
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 128/351 (36%), Gaps = 90/351 (25%)
Query: 152 RQIGYSHTQA-VYNALLEMIESTNNNSNDRIPEQFLREIKD----EDKEVLGKLLNV--- 203
R++G A YN LLE I S +N+S+ + E L+E++D DK L +L V
Sbjct: 168 REMGLCVPNAYTYNCLLEAI-SKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCN 226
Query: 204 ---------------------------LIRKYCQNGLWNAALEELGRLKDFGYKASRLTY 236
L+ +C+ G + A E + L++ + + TY
Sbjct: 227 TGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTY 286
Query: 237 NALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEK 293
L+ F++ ++D A+ + +M +G + D LCK AL+L I++
Sbjct: 287 CVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKR 346
Query: 294 EEFVPD---------------------------------TILYTKMISGLCEASLFEEAM 320
PD +LY + G L EA
Sbjct: 347 SGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAY 406
Query: 321 DFLNRMRAN------------------SCIPNVVTYRILLCGCLRKKQLGRCKRILSLMI 362
F+ + N + +P+ + I++ ++ ++ +L ++
Sbjct: 407 SFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIV 466
Query: 363 MEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIG 413
G P P ++N+++ C+ + KLL +M G +P N + G
Sbjct: 467 QNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYG 517
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 111/289 (38%), Gaps = 23/289 (7%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGY-KASRLTYNALVIVFLRAEKLDTAYLVHREMSNL 262
+I Y + G +N ALE ++ G KA+ +T +++ L+ VHR + ++
Sbjct: 957 MIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDV 1016
Query: 263 GYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV-PDTILYTKMISGLCEASLFEEAMD 321
+ K G DA ++ + D +++ +I GL E++
Sbjct: 1017 HLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQ 1076
Query: 322 FLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYC 381
++MR + P+ +T+ LL C + + G P + +V
Sbjct: 1077 LFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLS 1136
Query: 382 RSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEV- 440
R+ A+ + +M +P + L+ G + + LELAET +++E+
Sbjct: 1137 RAGLVKDAHDFISEM---PIKPTGSMLGALLNGCINHGN------LELAETVGKKLIELQ 1187
Query: 441 ----GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
G + NV + K +A +RE M K + I +S
Sbjct: 1188 PHNDGRYVGLANVY-------AINKQFRAARSMREAMEKKGVKKIAGHS 1229
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 347 RKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCG-CQPGY 405
R +Q K ++ ++ CF SPG F + + A + ++ + G C P
Sbjct: 118 RARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNA 177
Query: 406 VVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKA 465
YN L+ I + +EL E EM + G +K ++ + C GK E+A
Sbjct: 178 YTYNCLLEAISKSNS----SSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERA 233
Query: 466 FNVIREMMSKGFIPD 480
+V E++S+G++ +
Sbjct: 234 LSVFNEILSRGWLDE 248
>AT2G41720.1 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403744-17407127 REVERSE
Length = 822
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 9/261 (3%)
Query: 228 GYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKA---GKW 284
G K + ++YNAL+ + TA V ++ G D + C +S ++ GK
Sbjct: 350 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 409
Query: 285 RDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCG 344
++ ++ KE P+ + Y +I EA++ +M + PNVV+ LL
Sbjct: 410 KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 469
Query: 345 CLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPG 404
C R K+ +LS G + +NS + +Y + + A L + M K +
Sbjct: 470 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKAD 529
Query: 405 YVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEK 464
V + ILI G C P A + EM ++ + L K S+ G+ +
Sbjct: 530 SVTFTILISGSCRMSKYPE------AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTE 583
Query: 465 AFNVIREMMSKGFIPDIGTYS 485
A ++ +M G PD+ Y+
Sbjct: 584 AESIFNQMKMAGCEPDVIAYT 604
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 3/214 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI Y NG A+E +++ G K + ++ L+ R++K V +
Sbjct: 429 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 488
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
G ++++ S A + A+ L + K++ D++ +T +ISG C S + E
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 548
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ +L M S Y +LC ++ Q+ + I + M M GC P + S++H
Sbjct: 549 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 608
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILI 412
AY S + A +L +M G +P + + L+
Sbjct: 609 AYNASEKWGKACELFLEMEANGIEPDSIACSALM 642
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 116/291 (39%), Gaps = 16/291 (5%)
Query: 203 VLIRKYCQNGLWNAALEELGRLK-DFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
VLIR+ + G + +K Y A YN ++ + R +D A + EM
Sbjct: 112 VLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQK 171
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEE 318
D+ T ++ +AG+WR A+ L++ + P Y +I+ + + E
Sbjct: 172 WSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRE 231
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A++ +M N P++VT+ I+L +Q + LM P FN +++
Sbjct: 232 ALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIY 291
Query: 379 AYCRSRDYSYAYKLLKKM--VKCGCQPGYVVYNILIG--GICGNEDLPSMDVLELAETAY 434
+ S A L M + C+P V + ++ + G +E +
Sbjct: 292 CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGE--------IENCRAVF 343
Query: 435 SEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
M+ G+ N V+ + G A +V+ ++ G IPD+ +Y+
Sbjct: 344 EAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYT 394
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 123/324 (37%), Gaps = 46/324 (14%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI +G W ALE ++ D G +T+N ++ + + A M
Sbjct: 217 NNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 276
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLI-----EKEEFVPDTILYTKMIS-------- 308
D+ T + L K G+ AL L ++ E PD + +T ++
Sbjct: 277 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 336
Query: 309 ----GLCEASLFE-----------------------EAMDFLNRMRANSCIPNVVTYRIL 341
+ EA + E A+ L ++ N IP+VV+Y L
Sbjct: 337 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 396
Query: 342 LCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGC 401
L R +Q G+ K + +M E P+ +N+L+ AY + + A ++ ++M + G
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456
Query: 402 QPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGK 461
+P V L+ ++ ++D T S G+ LN ++ +
Sbjct: 457 KPNVVSVCTLLAACSRSKKKVNVD------TVLSAAQSRGINLNTAAYNSAIGSYINAAE 510
Query: 462 FEKAFNVIREMMSKGFIPDIGTYS 485
EKA + + M K D T++
Sbjct: 511 LEKAIALYQSMRKKKVKADSVTFT 534
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 94/223 (42%), Gaps = 11/223 (4%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ N++IR + ++ + A ++ + K TY+AL+ RA + A + +M
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLF 316
+ T ++ +G WR+AL + +K PD + + ++S +
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLM-----IMEGCFPSPG 371
+A+ + M+ P+ T+ I++ CL K LG+ + L L C P
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIY-CLSK--LGQSSQALDLFNSMREKRAECRPDVV 321
Query: 372 IFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG 414
F S++H Y + + + MV G +P V YN L+G
Sbjct: 322 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGA 364
>AT2G36240.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G09900.1); Has 18740 Blast hits to 5421
proteins in 159 species: Archae - 3; Bacteria - 12;
Metazoa - 272; Fungi - 258; Plants - 17650; Viruses - 2;
Other Eukaryotes - 543 (source: NCBI BLink). |
chr2:15195663-15197156 FORWARD
Length = 497
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 110/255 (43%), Gaps = 12/255 (4%)
Query: 236 YNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTL-GCFAHSLCKAGKWRDALTLIE-- 292
+ + + + RA K+D A L M L + + + K+G AL +
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 293 -KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQL 351
KE PD + +I+G C +S F+ A+D M+ C PNVV++ L+ G L ++
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 352 GRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
++ MI GC S LV CR A L+ ++ P Y L
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSL 339
Query: 412 IGGICG-NEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIR 470
+ +CG N+ + +M+++E E+ + G + + L G+ EKA +
Sbjct: 340 VEKLCGENKAVRAMEMME-------ELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFME 392
Query: 471 EMMSKGFIPDIGTYS 485
+MM+ G +PD T++
Sbjct: 393 KMMNAGILPDSVTFN 407
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 109/267 (40%), Gaps = 9/267 (3%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
N+LI YC++ ++ AL+ +K+ G + + +++N L+ FL + K++ + EM
Sbjct: 231 FNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMI 290
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFE 317
LG T LC+ G+ DA L+ + +P Y ++ LC +
Sbjct: 291 ELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAV 350
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
AM+ + + P + L+ G + + + + M+ G P FN L+
Sbjct: 351 RAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLL 410
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEM 437
C S + A +L G +P Y++L+ G +VL +EM
Sbjct: 411 RDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVL------VNEM 464
Query: 438 LEVGVVLNKVNVSNFARCLCGVGKFEK 464
L+ ++ + + L GKF +
Sbjct: 465 LDKDMLPDIFTYNRLMDGLSCTGKFSR 491
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 126/299 (42%), Gaps = 31/299 (10%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N ++ Y ++G + AL R+ K T+N L+ + R+ K D A + REM
Sbjct: 197 NTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKE 256
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTK-----MISGLCEASLF 316
G + + +GK + + + E + +++ ++ GLC
Sbjct: 257 KGCEPNVVSFNTLIRGFLSSGKIEEGVKM--AYEMIELGCRFSEATCEILVDGLCREGRV 314
Query: 317 EEA----MDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIME-----GCF 367
++A +D LN+ +P+ Y G L +K G K + ++ +ME G
Sbjct: 315 DDACGLVLDLLNK----RVLPSEFDY-----GSLVEKLCGENKAVRAMEMMEELWKKGQT 365
Query: 368 PSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVL 427
P +LV +S A ++KM+ G P V +N+L+ +C ++ S D
Sbjct: 366 PCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDH--STDAN 423
Query: 428 ELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYSK 486
L A S+ E V VS F + G+ ++ ++ EM+ K +PDI TY++
Sbjct: 424 RLRLLASSKGYEPDETTYHVLVSGFTK----EGRRKEGEVLVNEMLDKDMLPDIFTYNR 478
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 94/235 (40%), Gaps = 3/235 (1%)
Query: 184 QFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF 243
RE+K++ E N LIR + +G ++ + + G + S T LV
Sbjct: 249 DLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGL 308
Query: 244 LRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDT 300
R ++D A + ++ N F G LC K A+ ++E K+ P
Sbjct: 309 CREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCF 368
Query: 301 ILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSL 360
I T ++ GL ++ E+A F+ +M +P+ VT+ +LL R+ L
Sbjct: 369 IACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLL 428
Query: 361 MIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
+G P ++ LV + + L+ +M+ P YN L+ G+
Sbjct: 429 ASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
>AT2G17525.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7624178-7626058 FORWARD
Length = 626
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 15/272 (5%)
Query: 215 NAALEELGRLKDF-GYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN-LGYSMDSFTLG 272
+ ALE F G+ SR TY AL + DT Y + EM + +G D
Sbjct: 57 SGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFV 116
Query: 273 CFAHSLCKAGKWRDALT---LIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRAN 329
+A + ++ L+ K P ++ ++ L + + F +M A+
Sbjct: 117 TIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMAS 176
Query: 330 SCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYA 389
+V TY IL+ G ++G ++L +M G P+ ++N+L+HA C++ A
Sbjct: 177 GIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRA 236
Query: 390 YKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNV 449
L+ +M +P V +NILI C + L + + L E +S +G V + V V
Sbjct: 237 RSLMSEMK----EPNDVTFNILISAYCNEQKL--IQSMVLLEKCFS----LGFVPDVVTV 286
Query: 450 SNFARCLCGVGKFEKAFNVIREMMSKGFIPDI 481
+ LC G+ +A V+ + SKG D+
Sbjct: 287 TKVMEVLCNEGRVSEALEVLERVESKGGKVDV 318
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 121/285 (42%), Gaps = 19/285 (6%)
Query: 180 RIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNAL 239
R+ ++F E++ + + N+LI YC G+ ++AL+ +K + + T+N L
Sbjct: 335 RVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTL 394
Query: 240 VIVFLRAEKLDTAYLVHREMSN----LGYSMDSFTLGCFAHSLCKAGKWRDALT-LIEKE 294
+ + D + M + G +D + C + K +W DAL L++ E
Sbjct: 395 IRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYN--CVIYGFYKENRWEDALEFLLKME 452
Query: 295 EFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRC 354
+ P + + + LCE ++ ++M +P+++ C R Q G+
Sbjct: 453 KLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSH---CLIHRYSQHGKI 509
Query: 355 KRILSL---MIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
+ L L M+ G P FN+++ +C+ K ++ M + GC P YN L
Sbjct: 510 EESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPL 569
Query: 412 IGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCL 456
+ +C D ++ A +S M+E +V + S+ CL
Sbjct: 570 LEELCVKGD------IQKAWLLFSRMVEKSIVPDPSMWSSLMFCL 608
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 119/290 (41%), Gaps = 15/290 (5%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N L++ YC G A ++ GY + TYN L+ + LD+A +M
Sbjct: 322 NTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKT 381
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTIL------YTKMISGLCEASL 315
+ T L G+ D L ++E + DT+ Y +I G + +
Sbjct: 382 DAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQ-DSDTVHGARIDPYNCVIYGFYKENR 440
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
+E+A++FL +M P V L K + K MI EG PS + +
Sbjct: 441 WEDALEFLLKM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHC 498
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYS 435
L+H Y + + +L+ MV G P +N +I G C + + M+ ++ E
Sbjct: 499 LIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKV--MNGIKFVE---- 552
Query: 436 EMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+M E G V + + + LC G +KA+ + M+ K +PD +S
Sbjct: 553 DMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWS 602
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 140/341 (41%), Gaps = 30/341 (8%)
Query: 155 GYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLW 214
G + VYN LL + N R R + E KE N+LI YC
Sbjct: 212 GVAPNAVVYNTLLHAL--CKNGKVGRA-----RSLMSEMKEPNDVTFNILISAYCNEQKL 264
Query: 215 NAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCF 274
++ L + G+ +T ++ V ++ A V + + G +D
Sbjct: 265 IQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTL 324
Query: 275 AHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSC 331
C GK R A +E++ ++P+ Y +I+G C+ + + A+D N M+ ++
Sbjct: 325 VKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAI 384
Query: 332 IPNVVTYRILLCGCLRKKQLGRCKRILSLM----IMEGCFPSPGIFNSLVHAYCRSRDYS 387
N T+ L+ G + +IL +M + G P +N +++ + + +
Sbjct: 385 RWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDP--YNCVIYGFYKENRWE 442
Query: 388 YAYKLLKKMVKCGCQPGYVVYNILIGGIC---GNEDLPSMDVLELAETAYSEMLEVGVVL 444
A + L KM K P V + + +C G +DL +TAY +M+ G V
Sbjct: 443 DALEFLLKMEKLF--PRAVDRSFKLISLCEKGGMDDL---------KTAYDQMIGEGGVP 491
Query: 445 NKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ + GK E++ +I +M+++G++P T++
Sbjct: 492 SIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFN 532
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 145/362 (40%), Gaps = 37/362 (10%)
Query: 138 KNPELGIKFFIWAGRQIGYSHTQAVYNALLEMI-----ESTNNNSNDRIPEQFLREIKDE 192
K+ ++ F WA G+ H+++ Y AL + T D +P+ D
Sbjct: 54 KSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDD- 112
Query: 193 DKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTA 252
+ +IR + + L + + + FG K S +N+++ V ++ E +D A
Sbjct: 113 ------AIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIA 165
Query: 253 Y-LVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMIS 308
R+M G D +T G L + D L++ P+ ++Y ++
Sbjct: 166 REFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLH 225
Query: 309 GLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCF- 367
LC+ A ++ M+ PN VT+ IL+ +++L I S++++E CF
Sbjct: 226 ALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKL-----IQSMVLLEKCFS 276
Query: 368 ----PSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPS 423
P ++ C S A ++L+++ G + V N L+ G C +
Sbjct: 277 LGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYC------A 330
Query: 424 MDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGT 483
+ + +A+ + EM G + N + C VG + A + +M + + T
Sbjct: 331 LGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFAT 390
Query: 484 YS 485
++
Sbjct: 391 FN 392
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 8/214 (3%)
Query: 224 LKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGK 283
+K G + + YN L+ + K+ A + EM + T + C K
Sbjct: 208 MKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQK 263
Query: 284 WRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRI 340
++ L+EK FVPD + TK++ LC EA++ L R+ + +VV
Sbjct: 264 LIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNT 323
Query: 341 LLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCG 400
L+ G ++ +R M +G P+ +N L+ YC A M
Sbjct: 324 LVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDA 383
Query: 401 CQPGYVVYNILIGGI-CGNEDLPSMDVLELAETA 433
+ + +N LI G+ G + +LE+ + +
Sbjct: 384 IRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDS 417
>AT2G41720.2 | Symbols: EMB2654 | EMB2654 (EMBRYO DEFECTIVE 2654) |
chr2:17403861-17406648 REVERSE
Length = 683
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 9/261 (3%)
Query: 228 GYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKA---GKW 284
G K + ++YNAL+ + TA V ++ G D + C +S ++ GK
Sbjct: 218 GLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKA 277
Query: 285 RDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCG 344
++ ++ KE P+ + Y +I EA++ +M + PNVV+ LL
Sbjct: 278 KEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA 337
Query: 345 CLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPG 404
C R K+ +LS G + +NS + +Y + + A L + M K +
Sbjct: 338 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKAD 397
Query: 405 YVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEK 464
V + ILI G C P A + EM ++ + L K S+ G+ +
Sbjct: 398 SVTFTILISGSCRMSKYPE------AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTE 451
Query: 465 AFNVIREMMSKGFIPDIGTYS 485
A ++ +M G PD+ Y+
Sbjct: 452 AESIFNQMKMAGCEPDVIAYT 472
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 3/214 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI Y NG A+E +++ G K + ++ L+ R++K V +
Sbjct: 297 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 356
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
G ++++ S A + A+ L + K++ D++ +T +ISG C S + E
Sbjct: 357 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 416
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ +L M S Y +LC ++ Q+ + I + M M GC P + S++H
Sbjct: 417 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLH 476
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILI 412
AY S + A +L +M G +P + + L+
Sbjct: 477 AYNASEKWGKACELFLEMEANGIEPDSIACSALM 510
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 107/263 (40%), Gaps = 13/263 (4%)
Query: 229 YKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDAL 288
Y A YN ++ + R +D A + EM D+ T ++ +AG+WR A+
Sbjct: 7 YCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAM 66
Query: 289 TLIE---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGC 345
L++ + P Y +I+ + + EA++ +M N P++VT+ I+L
Sbjct: 67 NLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY 126
Query: 346 LRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKM--VKCGCQP 403
+Q + LM P FN +++ + S A L M + C+P
Sbjct: 127 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRP 186
Query: 404 GYVVYNILIGGICGNEDLPSMD-VLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKF 462
V + ++ L S+ +E + M+ G+ N V+ + G
Sbjct: 187 DVVTFTSIM-------HLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 239
Query: 463 EKAFNVIREMMSKGFIPDIGTYS 485
A +V+ ++ G IPD+ +Y+
Sbjct: 240 GTALSVLGDIKQNGIIPDVVSYT 262
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 123/324 (37%), Gaps = 46/324 (14%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI +G W ALE ++ D G +T+N ++ + + A M
Sbjct: 85 NNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 144
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLI-----EKEEFVPDTILYTKMIS-------- 308
D+ T + L K G+ AL L ++ E PD + +T ++
Sbjct: 145 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 204
Query: 309 ----GLCEASLFE-----------------------EAMDFLNRMRANSCIPNVVTYRIL 341
+ EA + E A+ L ++ N IP+VV+Y L
Sbjct: 205 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 264
Query: 342 LCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGC 401
L R +Q G+ K + +M E P+ +N+L+ AY + + A ++ ++M + G
Sbjct: 265 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 324
Query: 402 QPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGK 461
+P V L+ ++ ++D T S G+ LN ++ +
Sbjct: 325 KPNVVSVCTLLAACSRSKKKVNVD------TVLSAAQSRGINLNTAAYNSAIGSYINAAE 378
Query: 462 FEKAFNVIREMMSKGFIPDIGTYS 485
EKA + + M K D T++
Sbjct: 379 LEKAIALYQSMRKKKVKADSVTFT 402
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 94/223 (42%), Gaps = 11/223 (4%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ N++IR + ++ + A ++ + K TY+AL+ RA + A + +M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLF 316
+ T ++ +G WR+AL + +K PD + + ++S +
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLM-----IMEGCFPSPG 371
+A+ + M+ P+ T+ I++ CL K LG+ + L L C P
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIY-CLSK--LGQSSQALDLFNSMREKRAECRPDVV 189
Query: 372 IFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG 414
F S++H Y + + + MV G +P V YN L+G
Sbjct: 190 TFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGA 232
>AT3G17370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5949006-5949644 REVERSE
Length = 212
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 19/178 (10%)
Query: 299 DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRIL 358
DT Y +I GLC+A F+EA + + + P+V TY +++ R LGR +++
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLY 68
Query: 359 SLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
+ MI G P +NS++H C+ + A K+ K C +N LI G C
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK-----SCS----TFNTLINGYCKA 119
Query: 419 EDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKG 476
+ D + L + EM G+V N + + VG F A ++ +EM+S G
Sbjct: 120 TRVK--DGMNL----FCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 76/192 (39%), Gaps = 10/192 (5%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N++I C+ G ++ A L G + TYN ++ R L A ++ EM
Sbjct: 18 NIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMIR 73
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMD 321
G D+ T H LCK K L + + + +I+G C+A+ ++ M+
Sbjct: 74 RGLVPDTITYNSMIHGLCKQNK------LAQARKVSKSCSTFNTLINGYCKATRVKDGMN 127
Query: 322 FLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYC 381
M + NV+TY L+ G + I M+ G + S F ++ C
Sbjct: 128 LFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLC 187
Query: 382 RSRDYSYAYKLL 393
++ A +L
Sbjct: 188 SRKELRKAVAML 199
>AT3G15200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5117489-5119060 REVERSE
Length = 523
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 115/507 (22%), Positives = 200/507 (39%), Gaps = 82/507 (16%)
Query: 34 NLLCVISRFMSSSSDDLEGLFDPEDPMSLDNSRMESISSKEFSFLRDSLLES-------- 85
L +SR SS D +F PE P +N I+ F FL L S
Sbjct: 12 QLQSALSRRRISSLVDFRRVFPPETPNHKNN-----ITLSRFHFLGTHFLHSLGAPDKFP 66
Query: 86 -KFDTGKRSNDAVLISNAILNNDDGFGSKTQKFLRQFREKLSESLVAEVLNLVKNPELGI 144
+F+ K A+ + N I ++ K ++ L + L+E LV EV+N +N
Sbjct: 67 NRFNDDKDKQSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVN--RNRSDWK 124
Query: 145 KFFIWAG---RQIGYSHTQAVYNALLEMIESTNNNSNDRIPE--QFLREIKDEDKEVLGK 199
+I + +Q + + +YN +L+++ R E Q E+ D V K
Sbjct: 125 PAYILSQLVVKQSVHLSSSMLYNEILDVLGKMR-----RFEEFHQVFDEMSKRDGFVNEK 179
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLV---- 255
VL+ +Y + A+ R K+FG + ++ L++ R + ++ A +
Sbjct: 180 TYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSR 239
Query: 256 HREMSNLGYSMDSFTLG-CFAHSLCKAGK-WRDALTLIEKEEFVPDTILYTKMISGLCEA 313
RE +M+ G C ++ +A + W+D + + PD + Y MI+ L +
Sbjct: 240 RREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIA----SKCRPDVVSYGTMINALTKK 295
Query: 314 SLFEEAMDFLNRM---RANSCI--------------------------------PNVVTY 338
+AM+ M R N + PNVVTY
Sbjct: 296 GKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTY 355
Query: 339 RILLCGCLRKKQLGRCKRILSLMIMEG--CFPSPGIFNSLVHAYCRSRDYSYAYKLLKKM 396
LL + ++ + ++ M ++G C P+ F+ L+ RS+D +L++M
Sbjct: 356 NSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDI---VLERM 412
Query: 397 VKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCL 456
K C+ +YN++ D E +SEM G+ ++ + L
Sbjct: 413 AKNKCEMTSDLYNLMFRLYV------QWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGL 466
Query: 457 CGVGKFEKAFNVIREMMSKGFIPDIGT 483
GK +A + +EMMSKG +P+ T
Sbjct: 467 HTKGKIGEALSYFQEMMSKGMVPEPRT 493
>AT5G60960.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24528423-24529988 REVERSE
Length = 521
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 111/286 (38%), Gaps = 28/286 (9%)
Query: 221 LGRLKDFG--------YK--ASRLTYNALVIVFLRAEKLDTAYLVHREMSN-LGYSMDSF 269
GR KDF YK A T + + +RA + +M N G D
Sbjct: 153 FGRRKDFKGMLEIISKYKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKE 212
Query: 270 TLGCFAHSLCKAGKWRDALTLIEK--EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMR 327
+L LC+ G A +++ E PD + +ISG C A +EA M
Sbjct: 213 SLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMS 272
Query: 328 ANSCIPNVVTYRILL---CGCLRKKQ----LGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
Y ++L C RKK +++L M G + FN L++
Sbjct: 273 RGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNL 332
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVL--ELAETAYSEML 438
C+ R A L +M + GCQP Y +LI + + D + ++ Y E+L
Sbjct: 333 CKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELL 392
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
NK F + LCG+ + E A +V + M + G P I TY
Sbjct: 393 ------NKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTY 432
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 153/366 (41%), Gaps = 62/366 (16%)
Query: 129 LVAEVLNLVKNPELG---IKFFIWAGRQIGYSHTQAV-------------YNALLEMIES 172
L+ + LNL +PE G + F W +SHT + +LE+I
Sbjct: 111 LILQTLNL--SPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISK 168
Query: 173 --------TNNNSNDRI-----PEQ---FLREIKDE-----DKEVLGKLLNVLIRKYCQN 211
T ++ DR+ P+Q F +++++ DKE L ++++K C+
Sbjct: 169 YKGIAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESL----TLVVKKLCEK 224
Query: 212 GLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTL 271
G + A + + + + + + L+ + AEKLD A + EMS G+ + +
Sbjct: 225 GHASIAEKMVKNTANEIFPDENIC-DLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAY 283
Query: 272 GCFAHSLCKAGKWRDALTL---IEK----EEF--VP-DTILYTKMISGLCEASLFEEAMD 321
+CK + +D L +EK EF VP +T + +I+ LC+ EEAM
Sbjct: 284 NMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMT 343
Query: 322 FLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGC--FPSPGIFNSLVHA 379
RM C P+ TY +L+ + ++G ++ M G + + +
Sbjct: 344 LFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKI 403
Query: 380 YCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLE 439
C +A + K M GC+PG Y++L+G +C N L + L Y E +
Sbjct: 404 LCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGL------YKEAAK 457
Query: 440 VGVVLN 445
G+ ++
Sbjct: 458 KGIAVS 463
>AT4G34830.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: EMB2745 (EMBRYO DEFECTIVE 2745)
(TAIR:AT5G39710.1); Has 19818 Blast hits to 5849
proteins in 171 species: Archae - 3; Bacteria - 16;
Metazoa - 570; Fungi - 397; Plants - 17732; Viruses - 0;
Other Eukaryotes - 1100 (source: NCBI BLink). |
chr4:16599976-16605994 REVERSE
Length = 1089
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 114/265 (43%), Gaps = 11/265 (4%)
Query: 224 LKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGK 283
+++ G A Y L+ ++ K+D + V +MSN G + T G +AG+
Sbjct: 493 VQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQ 552
Query: 284 WRDAL---TLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANS--CIPNVVTY 338
A ++ + PD +++ +IS ++ + A D L M+A + P+ ++
Sbjct: 553 VAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISI 612
Query: 339 RILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVK 398
L+ C Q+ R K + ++ G +P ++ V++ +S D+ +A + K M +
Sbjct: 613 GALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKE 672
Query: 399 CGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCG 458
P V ++ LI + G+ + L+ A + G+ L ++ S+ C
Sbjct: 673 KDVTPDEVFFSALI-DVAGHAKM-----LDEAFGILQDAKSQGIRLGTISYSSLMGACCN 726
Query: 459 VGKFEKAFNVIREMMSKGFIPDIGT 483
++KA + ++ S P I T
Sbjct: 727 AKDWKKALELYEKIKSIKLRPTIST 751
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 129/311 (41%), Gaps = 38/311 (12%)
Query: 199 KLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
++ + + ++G W+ A +K+ + ++AL+ V A+ LD A+ + ++
Sbjct: 645 EVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQD 704
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV---PDTILYTKMISGLCEASL 315
+ G + + + + C A W+ AL L EK + + P +I+ LCE +
Sbjct: 705 AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
+AM++L+ ++ PN +TY +L+ RK ++LS +G P+ I
Sbjct: 765 LPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNL-IMCR 823
Query: 376 LVHAYCRSR------------------------DYSYAYKLLKKMVKCGCQPGYVVYNIL 411
+ + C+ R S A + ++ + G P V + +
Sbjct: 824 CITSLCKRRFEKACAGGEPVVSFKSGRPQIENKWTSMALMVYRETISGGTVPTTEVVSQV 883
Query: 412 IGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFE-KAFNVIR 470
+G + D D L + +G+ ++ N + G G+++ +AF+++
Sbjct: 884 LGCLQLPHDAALRDRL---------ISTLGINISSQKQHNIFPLVDGFGEYDPRAFSLLE 934
Query: 471 EMMSKGFIPDI 481
E S G +P +
Sbjct: 935 EATSLGVLPSV 945
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 115/287 (40%), Gaps = 13/287 (4%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
LI + G A G L+ K R+ +NAL+ ++ +D A+ V EM
Sbjct: 540 FGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMK 599
Query: 261 NLGYSMD--SFTLGCFAHSLCKAG---KWRDALTLIEKEEFVPDTILYTKMISGLCEASL 315
+ +D ++G + C AG + ++ +I K +YT ++ ++
Sbjct: 600 AETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGD 659
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
++ A M+ P+ V + L+ K L IL +G ++S
Sbjct: 660 WDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSS 719
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLP-SMDVLELAETAY 434
L+ A C ++D+ A +L +K+ +P N LI +C LP +M+ L+
Sbjct: 720 LMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLD------ 773
Query: 435 SEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDI 481
E+ +G+ N + S FE +F ++ + G P++
Sbjct: 774 -EIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNL 819
>AT1G11630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3913168-3914385 REVERSE
Length = 405
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 240 VIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA----LTLIEKEE 295
+I++ RA LD + R + +L + A +++A L + +
Sbjct: 118 IILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYG 177
Query: 296 FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCK 355
PD Y +MI LCE+ + + M P ++ +++ G ++++ +
Sbjct: 178 IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVR 237
Query: 356 RILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
+++ +M G +N ++ C+ + + A L+ ++ C +P V Y++LI G
Sbjct: 238 KVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGF 297
Query: 416 CGNEDL-PSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMS 474
C E+L +M++ E+ M+ G + CLC G FE A + RE M
Sbjct: 298 CSEENLDEAMNLFEV-------MVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESME 350
Query: 475 KGFIP 479
K ++P
Sbjct: 351 KNWVP 355
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 85/216 (39%), Gaps = 32/216 (14%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N +IR C++G +++ + ++ K + ++ ++ F + EK D V R M
Sbjct: 186 NRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDE 245
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMD 321
G + T LCK K +A LI D ++
Sbjct: 246 FGVHVGVATYNIMIQCLCKRKKSAEAKALI-------DGVMSC----------------- 281
Query: 322 FLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYC 381
RMR PN VTY +L+ G ++ L + +M+ G P + +L+H C
Sbjct: 282 ---RMR-----PNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLC 333
Query: 382 RSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICG 417
+ D+ A L ++ ++ P + V L+ G+
Sbjct: 334 KGGDFETALILCRESMEKNWVPSFSVMKWLVNGLAS 369
>AT1G77405.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: EMB2745 (EMBRYO
DEFECTIVE 2745) (TAIR:AT5G39710.1); Has 13180 Blast hits
to 4377 proteins in 153 species: Archae - 4; Bacteria -
12; Metazoa - 210; Fungi - 191; Plants - 12251; Viruses
- 0; Other Eukaryotes - 512 (source: NCBI BLink). |
chr1:29087145-29088521 FORWARD
Length = 458
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/333 (19%), Positives = 129/333 (38%), Gaps = 29/333 (8%)
Query: 143 GIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREI--KDEDKEVLGKL 200
++FF W G+ H + + ++ N+ FLR++ ++ K V+
Sbjct: 110 ALEFFFWIETHFGFDHNEITCRDMACLLAKGNDFKG---LWDFLRQVSRRENGKNVVTTA 166
Query: 201 -LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ L++ + G AL R+K++ K YN ++ R A + +M
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 260 SNLG--YSMDSFTLGCFAHSLCKAGKWRDALTLIEK--------------EEFVPDTILY 303
G Y D++T S C+ G I + FVPD + Y
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTY 286
Query: 304 TKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQL-GRCKRILSLMI 362
+I G C+ + A++ M+ C+PN VTY + ++ G + + ++
Sbjct: 287 NCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKK 346
Query: 363 MEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLP 422
+ P + L+HA +R + A L+ +MV+ G P Y ++ +
Sbjct: 347 LGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLAS 406
Query: 423 SMD------VLELAETAYSEMLEVGVVLNKVNV 449
++D + E + YS ++++ + + V
Sbjct: 407 TLDEELHKRMREGIQQRYSRVMKIKPTMARKEV 439
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 99/247 (40%), Gaps = 28/247 (11%)
Query: 260 SNLGYSMDSFTLGCFAHSLCKA----GKWRDALTLIEKEEF---VPDTILYTKMISGLCE 312
++ G+ + T A L K G W D L + + E V T T ++ L E
Sbjct: 119 THFGFDHNEITCRDMACLLAKGNDFKGLW-DFLRQVSRRENGKNVVTTASITCLMKCLGE 177
Query: 313 ASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGI 372
+EA+ RM+ C P+V Y ++ R + + +L M + G P
Sbjct: 178 EGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDT 237
Query: 373 FNS--LVHAYCR-----------SRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNE 419
+ L+ +YCR R A ++ ++M+ G P V YN LI G C
Sbjct: 238 YTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTN 297
Query: 420 DLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGF-I 478
+ LEL E +M G V N+V ++F R + E A ++R M G +
Sbjct: 298 RIGR--ALELFE----DMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGV 351
Query: 479 PDIGTYS 485
P TY+
Sbjct: 352 PGSSTYT 358
>AT1G61870.1 | Symbols: PPR336 | PPR336 (pentatricopeptide repeat
336) | chr1:22865326-22866552 REVERSE
Length = 408
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 115/286 (40%), Gaps = 28/286 (9%)
Query: 214 WNAALEELGRLKDFG---------------YKASRLTYNALVIVFLRAEKLDTAYLVHR- 257
++AA+E L K F K+ R +A+V+ + +A LD + V R
Sbjct: 83 FSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVL-YAQANMLDHSLRVFRD 141
Query: 258 ----EMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEA 313
E+S S+++ C K K R + + + PD Y +MI CE+
Sbjct: 142 LEKFEISRTVKSLNALLFACLVAKDYKEAK-RVYIEMPKMYGIEPDLETYNRMIKVFCES 200
Query: 314 SLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIF 373
+ + M PN ++ +++ G + + ++L++M G +
Sbjct: 201 GSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTY 260
Query: 374 NSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETA 433
N + + C+ + A LL M+ G +P V Y+ LI G C +D E A+
Sbjct: 261 NIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDF------EEAKKL 314
Query: 434 YSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIP 479
+ M+ G + LC G FE A ++ +E M K ++P
Sbjct: 315 FKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP 360
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 4/220 (1%)
Query: 208 YCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNL-GYSM 266
Y Q + + +L L+ F + + NAL+ L A+ A V+ EM + G
Sbjct: 126 YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEP 185
Query: 267 DSFTLGCFAHSLCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFEEAMDFL 323
D T C++G + +++ E++ P++ + MISG +E L
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 324 NRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRS 383
M+ V TY I + ++K+ K +L M+ G P+ ++ L+H +C
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNE 305
Query: 384 RDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPS 423
D+ A KL K MV GC+P Y LI +C D +
Sbjct: 306 DDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFET 345
>AT5G14080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4543265-4545256 REVERSE
Length = 634
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 157/403 (38%), Gaps = 47/403 (11%)
Query: 121 FREKLSESLVAEVLN--LVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIE-STNNNS 177
FR +S SLVA V++ L+ + L + FF WA +Q GYSH Y+++ + + S ++
Sbjct: 41 FRHSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSA 100
Query: 178 NDRIPEQ-------------------------------FLREIKDEDKEVLGKLLNVLIR 206
D + +Q L E +E+ + N L+
Sbjct: 101 MDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLA 160
Query: 207 KYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSM 266
+G ++ A + +++ G + L + + F R+ + + + E+ ++
Sbjct: 161 GLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNI 220
Query: 267 DSFTLGCFA-HSLCKAGKWRDALTLIEKEEFV---PDTILYTKMISGLCEASLFEEAMDF 322
+ + HSLCK + DA ++E+ + PD + Y + E
Sbjct: 221 NGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVV 280
Query: 323 LNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPG-IFNSLVHAYC 381
L + R P YR + + K+L K + +I+ G FP I ++L+ +
Sbjct: 281 LKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAE-VIVSGKFPMDNDILDALIGS-V 338
Query: 382 RSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVG 441
+ D A + L MV G P + L +C ++ + AY + G
Sbjct: 339 SAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLI------KAYELLSSKG 392
Query: 442 VVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+ S LC G+ +++ ++EM +G PD+ Y
Sbjct: 393 YFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLY 435
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 91/207 (43%), Gaps = 12/207 (5%)
Query: 270 TLGCFAHSLCKAGKWRD---ALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRM 326
TL + +LC+ K A L+ + + + Y+ MIS LC+A E+ L M
Sbjct: 364 TLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEM 423
Query: 327 RANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDY 386
+ P+V Y L+ C + + + K++ M +EGC + +N L+ +
Sbjct: 424 KKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEA 483
Query: 387 SYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVG--VVL 444
+ +L KM++ G +P +Y LI G+C +E A + + +E V
Sbjct: 484 EESLRLFDKMLERGIEPDETIYMSLIEGLCKETK------IEAAMEVFRKCMERDHKTVT 537
Query: 445 NKVNVSNFARCLCGVGKFEKAFNVIRE 471
+V +S F LC G +A ++RE
Sbjct: 538 RRV-LSEFVLNLCSNGHSGEASQLLRE 563
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 123/308 (39%), Gaps = 14/308 (4%)
Query: 184 QFLR---EIKDEDKEVLGKLLNVLI-RKYCQNGLWNAALEELGRLKDFGYKASRLTYNAL 239
Q LR E+K + + G ++ +LI C+ A L L++ K + Y +
Sbjct: 205 QLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVI 264
Query: 240 VIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEF 296
F+ L +V ++ LG + S F L A + +A + E +F
Sbjct: 265 AEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKF 324
Query: 297 VPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKR 356
D + +I G A + A++FL M + +P + T L R + +
Sbjct: 325 PMDNDILDALI-GSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIK 383
Query: 357 ILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC 416
L+ +G F ++ ++ C++ +Y L++M K G P +YN LI C
Sbjct: 384 AYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACC 443
Query: 417 GNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKG 476
E ++ A+ + EM G +N + R L G+ E++ + +M+ +G
Sbjct: 444 KAE------MIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERG 497
Query: 477 FIPDIGTY 484
PD Y
Sbjct: 498 IEPDETIY 505
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 103/257 (40%), Gaps = 8/257 (3%)
Query: 221 LGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCK 280
L + + G Y A ++ + A++L A V + + + MD+ L S+
Sbjct: 281 LKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSA 340
Query: 281 AG--KWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTY 338
+ L + +P +K+ LC + + + + + +Y
Sbjct: 341 VDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSY 400
Query: 339 RILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVK 398
+++ + ++ L M EG P ++N+L+ A C++ A KL +M
Sbjct: 401 SLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFV 460
Query: 399 CGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCG 458
GC+ YN+LI + +E+ + + L L + +MLE G+ ++ + LC
Sbjct: 461 EGCKMNLTTYNVLIRKL--SEEGEAEESLRL----FDKMLERGIEPDETIYMSLIEGLCK 514
Query: 459 VGKFEKAFNVIREMMSK 475
K E A V R+ M +
Sbjct: 515 ETKIEAAMEVFRKCMER 531
>AT5G62370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:25041901-25044849 REVERSE
Length = 982
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 126/318 (39%), Gaps = 45/318 (14%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
L+++YC++ A+ R+ + ++ +N L+ F++ LD ++ +M G
Sbjct: 278 LMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKG 337
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLI----EKEEFVPDTILYTKMISGLCEASLFEEA 319
+ FT S CK G AL L E+ + YT +I G + ++A
Sbjct: 338 VQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKA 397
Query: 320 MDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL--- 376
+D L RM N +P+ +TY +LL + +L IL ++ GC +P + + L
Sbjct: 398 VDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNI 457
Query: 377 --------------------------VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNI 410
A C R+Y A ++KMV GC P YN
Sbjct: 458 EVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNS 517
Query: 411 LIGGICGN---EDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFN 467
+I + EDL S+ V + E + +V L VN LC + AF
Sbjct: 518 VIKCLFQENIIEDLASL-VNIIQELDFVP--DVDTYLIVVNE------LCKKNDRDAAFA 568
Query: 468 VIREMMSKGFIPDIGTYS 485
+I M G P + YS
Sbjct: 569 IIDAMEELGLRPTVAIYS 586
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/278 (19%), Positives = 107/278 (38%), Gaps = 15/278 (5%)
Query: 214 WNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGC 273
++ A L R+ GY SR + + +V ++ A+ ++ G + +
Sbjct: 147 FDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKR 206
Query: 274 FAHSLCKAGKWRDALTLIEK---EEFVPDTI-LYTKMISGLCEASLFEEAMDFLNRMRAN 329
LC G +A+ +++ +P + LY + C+ EA + M +
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVD 266
Query: 330 SCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYA 389
+ V Y L+ + + R+ M+ P IFN+L+H + +
Sbjct: 267 GYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKG 326
Query: 390 YKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNV 449
+ +M+K G Q Y+I+IG C ++ L + T ++ NV
Sbjct: 327 RVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISR--------NV 378
Query: 450 SNFARCLCGV---GKFEKAFNVIREMMSKGFIPDIGTY 484
+ + G G +KA +++ M+ G +PD TY
Sbjct: 379 HCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITY 416
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 3/185 (1%)
Query: 217 ALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAH 276
A+E +G++K + +N ++ + A +LD AY M G + T
Sbjct: 779 AMEVIGKVKK-SIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMK 837
Query: 277 SLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVV 336
S +AG A+ L E PD ++Y+ ++ GLC+ +A+ + M+ + PN
Sbjct: 838 SHIEAGDIESAIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKD 897
Query: 337 TY-RILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKK 395
+Y ++L C C + + K + + ++ +P L++ C + A L
Sbjct: 898 SYEKLLQCLCYSRLTMEAVKVVKDMAALD-IWPRSINHTWLIYILCEEKKLREARALFAI 956
Query: 396 MVKCG 400
MV+ G
Sbjct: 957 MVQSG 961
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/373 (18%), Positives = 140/373 (37%), Gaps = 71/373 (19%)
Query: 183 EQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIV 242
E L EI +D + L V+ C + AAL + ++ + G +YN+++
Sbjct: 462 ESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKC 521
Query: 243 FLRAEKL-DTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE--------- 292
+ + D A LV+ + L + D T + LCK A +I+
Sbjct: 522 LFQENIIEDLASLVNI-IQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRP 580
Query: 293 ---------------------KEEFV--------PDTILYTKMISGLCEASLFEEAMDFL 323
+E F PD I Y MI+ +EA + +
Sbjct: 581 TVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELV 640
Query: 324 NRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRS 383
+ + P+ TY +L+ G ++ + + + L M+ +G P+ ++ +L+ + +
Sbjct: 641 EEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKK 700
Query: 384 RDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC---------------GNEDL------- 421
D+ +++ L M + + ++ Y L+ G+ G E L
Sbjct: 701 GDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRT 760
Query: 422 -PSMDVLELAETAYSEMLEVGVV--LNKVNVSNF------ARCLCGVGKFEKAFNVIREM 472
P + + S+ + V+ + K + N C G+ ++A+N + M
Sbjct: 761 KPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESM 820
Query: 473 MSKGFIPDIGTYS 485
+G +P++ TY+
Sbjct: 821 QKEGIVPNLVTYT 833
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 111/310 (35%), Gaps = 49/310 (15%)
Query: 217 ALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAH 276
A E ++ + G + + Y ++ + R ++D A + E+ SFT
Sbjct: 601 AEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLIS 660
Query: 277 SLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIP 333
K G ++K + P+ +LYT +I + F+ + M N
Sbjct: 661 GFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKH 720
Query: 334 NVVTYRILLCGCLRK-------------------KQLGRCKRILSL-------------- 360
+ + Y LL G R ++L R K ++S+
Sbjct: 721 DHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAM 780
Query: 361 ----MIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC 416
+ + P+ + N+++ YC + AY L+ M K G P V Y IL+
Sbjct: 781 EVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHI 840
Query: 417 GNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKG 476
D+ S ++L E E ++V S + LC + A ++ EM G
Sbjct: 841 EAGDIES--AIDLFEGTNCEP-------DQVMYSTLLKGLCDFKRPLDALALMLEMQKSG 891
Query: 477 FIPDIGTYSK 486
P+ +Y K
Sbjct: 892 INPNKDSYEK 901
>AT3G25210.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 19 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT2G27800.1); Has 13348 Blast hits to 4225
proteins in 143 species: Archae - 3; Bacteria - 6;
Metazoa - 114; Fungi - 126; Plants - 12736; Viruses - 0;
Other Eukaryotes - 363 (source: NCBI BLink). |
chr3:9180348-9181487 FORWARD
Length = 379
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 128/300 (42%), Gaps = 16/300 (5%)
Query: 112 SKTQKFLRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIE 171
++ + +++ + + S V L +P+L + F W +Q GY H Y+ MI+
Sbjct: 60 TQFETWIQNLKPGFTNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHT---MIK 116
Query: 172 STNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYC-QNGLWNAALEELGR-LKDFGY 229
+ E + E+ E+ L N +IR C + L+N A + + L+
Sbjct: 117 QAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDS 176
Query: 230 KASRLTYNALVIVFL-RAEKLDTAYL-------VHREMSNLGYSMDSFTLGCFAHSLCKA 281
K TY L+ L R KL+ Y+ + ++M + G D+F L + K
Sbjct: 177 KPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKC 236
Query: 282 GKWRDALTLIEKEEFV---PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTY 338
+ +A+ + ++ P+ Y+ ++ G+CE + + F M+ +PN Y
Sbjct: 237 LEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCY 296
Query: 339 RILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVK 398
+L+C +++L ++ M+ P +N+++ CR S A +++++ K
Sbjct: 297 MVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKK 356
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 37/212 (17%)
Query: 302 LYTKMISGLCEAS----------------LFEEAMDFLNRM-RANSCIPNVVTYRILLCG 344
L ++I+G CE S LF A D N+M R++ P++ TY +LL
Sbjct: 130 LIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSS 189
Query: 345 CLRK-KQLGRC-------KRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKM 396
L++ +L C + + M G P + N ++ AY + + A ++ K+M
Sbjct: 190 LLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEM 249
Query: 397 VKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCL 456
G +P Y+ L+ G+C + Y EM G+V N S + +
Sbjct: 250 ALYGSEPNAYTYSYLVKGVCEKGRVGQ------GLGFYKEMQVKGMVPNG---SCYMVLI 300
Query: 457 CGVG---KFEKAFNVIREMMSKGFIPDIGTYS 485
C + + ++A V+ +M++ PD+ TY+
Sbjct: 301 CSLSMERRLDEAVEVVYDMLANSLSPDMLTYN 332
>AT5G25630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:8947426-8949424 FORWARD
Length = 574
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 131/298 (43%), Gaps = 26/298 (8%)
Query: 199 KLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFL------RAEKLDTA 252
+ NVL++ +C+ A E + ++++ G + +TYN + ++ RAE
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE 248
Query: 253 YLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE--KEEFV-PDTILYTKMISG 309
+V +E + + T G C+ G+ RD L + KE V + +++ +I+G
Sbjct: 249 KMVMKEKAKP----NGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLING 304
Query: 310 LCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPS 369
E + + L M+ + +V+TY ++ + + ++ M+ G P
Sbjct: 305 FVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPD 364
Query: 370 PGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLEL 429
++ L Y R+++ A +LL+ ++ +P V++ +I G C N SMD
Sbjct: 365 AHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVISGWCSN---GSMDD--- 417
Query: 430 AETAYSEMLEVGVVLNKVNVSNFARCLCG---VGKFEKAFNVIREMMSKGFIPDIGTY 484
A +++M + GV N+ F + G V + KA V++ M G P+ T+
Sbjct: 418 AMRVFNKMCKFGV---SPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 472
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
Query: 184 QFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF 243
+F+R +K+ E + N LI + + + E L +K+ KA +TY+ ++ +
Sbjct: 281 RFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAW 340
Query: 244 LRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK--EEFVPDTI 301
A ++ A V +EM G D+ A +A + + A L+E E P+ +
Sbjct: 341 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVV 400
Query: 302 LYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLM 361
++T +ISG C ++AM N+M PN+ T+ L+ G L KQ + + +L +M
Sbjct: 401 IFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM 460
Query: 362 IMEGCFPSPGIFNSLVHAY 380
G P F L A+
Sbjct: 461 RGCGVKPENSTFLLLAEAW 479
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
Query: 239 LVIVFLRAEKLDTAYLVHREMSNLGY--SMDSFTLGCFAHSLCKA-GKWRDALTLIEKEE 295
L+ V + + A V + ++ G+ S+ S+T A ++ K G ++ +E+
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 296 FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCK 355
D+I + +I+ E+ E+A+ L +M+ P TY L+ G + R
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 356 RILSLMIMEG---CFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNIL 411
+L LM+ EG P+ FN LV A+C+ + A++++KKM +CG +P V YN +
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 112/274 (40%), Gaps = 16/274 (5%)
Query: 221 LGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCK 280
+ ++ G K + +NA++ F + ++ A +M LG + + T
Sbjct: 103 VSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGI 162
Query: 281 AGKWR---DALTLIEKEEFV---PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPN 334
AGK + L L+ +E V P+ + ++ C+ EEA + + +M P+
Sbjct: 163 AGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPD 222
Query: 335 VVTYRILLCGCLRKKQLGRCK-RILSLMIM-EGCFPSPGIFNSLVHAYCRSRDYSYAYKL 392
VTY + ++K + R + ++ M+M E P+ +V YCR +
Sbjct: 223 TVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRF 282
Query: 393 LKKMVKCGCQPGYVVYNILIGGICGNEDLPSMD-VLELAETAYSEMLEVGVVLNKVNVSN 451
+++M + + VV+N LI G D +D VL L M E V + + S
Sbjct: 283 VRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTL-------MKECNVKADVITYST 335
Query: 452 FARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
G EKA V +EM+ G PD YS
Sbjct: 336 VMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYS 369
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 304 TKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIM 363
TK+++ L E EA + P++++Y LL +KQ G I+S +
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 364 EGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIG--GICGNEDL 421
G FN++++A+ S + A + L KM + G P YN LI GI G +
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 422 PSMDVLELAETAYSEMLEVGVVLNKVNVSNF---ARCLCGVGKFEKAFNVIREMMSKGFI 478
S ++L+L MLE G V N+ F + C K E+A+ V+++M G
Sbjct: 169 SS-ELLDL-------MLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 479 PDIGTYS 485
PD TY+
Sbjct: 221 PDTVTYN 227
>AT1G73710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27721190-27724165 FORWARD
Length = 991
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 135/353 (38%), Gaps = 44/353 (12%)
Query: 169 MIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFG 228
MI + + + E L++++++ K N+L+ + G AALE +++ G
Sbjct: 346 MIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVG 405
Query: 229 YKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDS-------------------- 268
+T+ A++ + + + + V EM +D
Sbjct: 406 LFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAK 465
Query: 269 -----FTLGCFAHSLCKA---------GKWRDALTLIEKEEFVP----DTILYTKMISGL 310
F L C S A G W +A T+ + + D + Y MI
Sbjct: 466 ALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAY 525
Query: 311 CEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSP 370
+A L E+A+ M+ P+ TY L + +RIL+ M+ GC P
Sbjct: 526 GKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGC 585
Query: 371 GIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELA 430
+ +++ +Y R S A L + M K G +P VVY LI G + ++E A
Sbjct: 586 KTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES------GMVEEA 639
Query: 431 ETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGT 483
+ M E GV N + +++ + VG E+A V +M PD+
Sbjct: 640 IQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAA 692
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 113/291 (38%), Gaps = 51/291 (17%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
NV+I+ Y + L AL +K+ G TYN+L + + +D A + EM +
Sbjct: 519 NVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLD 578
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
G T S + G DA+ L +EK P+ ++Y +I+G E+ + EE
Sbjct: 579 SGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEE 638
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ + M + N + + SL+
Sbjct: 639 AIQYFRMMEEHGVQSNHI-----------------------------------VLTSLIK 663
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
AY + A ++ KM P N ++ +C + + ++ AE+ ++ +
Sbjct: 664 AYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML-SLCAD-----LGIVSEAESIFNALR 717
Query: 439 EVGVVLNKVNVSNFARCLC---GVGKFEKAFNVIREMMSKGFIPDIGTYSK 486
E G +V +FA + G+G ++A V EM G + D ++++
Sbjct: 718 EKGT----CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQ 764
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Query: 235 TYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE 294
T+N L+ ++ +A +L+ A + EM G +D+ T H+ G +A +L++K
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 295 E---FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQL 351
E PDT Y ++S +A E A+++ ++R P+ VT+R +L ++K +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 352 GRCKRILSLM 361
+ +++ M
Sbjct: 427 AEVEAVIAEM 436
>AT2G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14807589-14810164 REVERSE
Length = 591
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 128/326 (39%), Gaps = 11/326 (3%)
Query: 161 AVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEE 220
VYNA +E + N+ + I + F R +D K + N++I Y + + +
Sbjct: 229 TVYNAYIEGLMKRKGNTEEAI-DVFQRMKRDRCKPTT-ETYNLMINLYGKASKSYMSWKL 286
Query: 221 LGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCK 280
++ K + TY ALV F R + A + ++ G D + S +
Sbjct: 287 YCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSR 346
Query: 281 AGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVT 337
AG A +L++ PD Y M+ A L +A M+ P + +
Sbjct: 347 AGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKS 406
Query: 338 YRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMV 397
+ +LL + + + +C+ I+ M G P + NS+++ Y R ++ K+L +M
Sbjct: 407 HMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEME 466
Query: 398 KCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLC 457
C YNILI I G LE E + E+ E + V ++
Sbjct: 467 NGPCTADISTYNILI-NIYGKAGF-----LERIEELFVELKEKNFRPDVVTWTSRIGAYS 520
Query: 458 GVGKFEKAFNVIREMMSKGFIPDIGT 483
+ K V EM+ G PD GT
Sbjct: 521 RKKLYVKCLEVFEEMIDSGCAPDGGT 546
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 122/290 (42%), Gaps = 19/290 (6%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
N+LI Y Q + A +L + Y + TY L+ + A ++ A +V EM
Sbjct: 158 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 217
Query: 261 NLGYSMDSFTLGCFAHS------LCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLC 311
N + + T+G ++ + + G +A+ + ++++ P T Y MI+
Sbjct: 218 N--HHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYG 275
Query: 312 EASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPG 371
+AS + MR++ C PN+ TY L+ R+ + + I + +G P
Sbjct: 276 KASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVY 335
Query: 372 IFNSLVHAYCRSRDYSY-AYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELA 430
++N+L+ +Y R+ Y Y A ++ M GC+P YNI++ G L S A
Sbjct: 336 VYNALMESYSRA-GYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY-GRAGLHSD-----A 388
Query: 431 ETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
E + EM +G+ + K +++EM G PD
Sbjct: 389 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 4/241 (1%)
Query: 183 EQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIV 242
E+ +++++ E + N L+ Y + G A E ++ G + R +YN +V
Sbjct: 319 EEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 378
Query: 243 FLRAEKLDTAYLVHREMSNLGY--SMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFV-PD 299
+ RA A V EM LG +M S L A+S + +A+ E V PD
Sbjct: 379 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438
Query: 300 TILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILS 359
T + M++ F + L M C ++ TY IL+ + L R + +
Sbjct: 439 TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFV 498
Query: 360 LMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNE 419
+ + P + S + AY R + Y ++ ++M+ GC P +L+ C +E
Sbjct: 499 ELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA-CSSE 557
Query: 420 D 420
+
Sbjct: 558 E 558
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 81/200 (40%), Gaps = 3/200 (1%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N+++ Y + GL + A +K G + ++ L+ + +A + + +EMS
Sbjct: 373 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE 432
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVP---DTILYTKMISGLCEASLFEE 318
G D+F L + + G++ ++ + E P D Y +I+ +A E
Sbjct: 433 NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLER 492
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
+ ++ + P+VVT+ + RKK +C + MI GC P G L+
Sbjct: 493 IEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLS 552
Query: 379 AYCRSRDYSYAYKLLKKMVK 398
A +L+ M K
Sbjct: 553 ACSSEEQVEQVTSVLRTMHK 572
>AT1G74850.1 | Symbols: PTAC2 | PTAC2 (PLASTID TRANSCRIPTIONALLY
ACTIVE2) | chr1:28119237-28122314 REVERSE
Length = 862
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 88/215 (40%), Gaps = 6/215 (2%)
Query: 203 VLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLV--HREMS 260
LI Y +NG + +LE L R+K+ S LTYN ++ R LD L+ EM
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARG-GLDWEGLLGLFAEMR 239
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFE 317
+ G D T + G +A + VPD Y+ ++ + E
Sbjct: 240 HEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLE 299
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
+ D L M + +P++ +Y +LL + + + M GC P+ ++ L+
Sbjct: 300 KVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILI 412
+ + +S Y +L +M P YNILI
Sbjct: 360 NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILI 394
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 7/207 (3%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM-- 259
+VL+ + Q+G ++ + +K TYN L+ VF + +M
Sbjct: 356 SVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVE 415
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLF 316
N+ M+++ FA K G DA L + + VP + YT +I +A+L+
Sbjct: 416 ENIEPDMETYEGIIFA--CGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALY 473
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
EEA+ N M P++ T+ LL R + + ILS ++ G + FN+
Sbjct: 474 EEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQ 533
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQP 403
+ AY + + A K M K C P
Sbjct: 534 IEAYKQGGKFEEAVKTYVDMEKSRCDP 560
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/263 (19%), Positives = 102/263 (38%), Gaps = 9/263 (3%)
Query: 221 LGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCK 280
LG + G +YN L+ + ++ + A V +M G + ++ T + +
Sbjct: 305 LGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ 364
Query: 281 AGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVT 337
+G++ D L ++ PD Y +I E F+E + + M + P++ T
Sbjct: 365 SGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMET 424
Query: 338 YRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMV 397
Y ++ C + ++IL M PS + ++ A+ ++ Y A M
Sbjct: 425 YEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMH 484
Query: 398 KCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLC 457
+ G P ++ L+ +++ +E S +++ G+ N+ +
Sbjct: 485 EVGSNPSIETFHSLL------YSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYK 538
Query: 458 GVGKFEKAFNVIREMMSKGFIPD 480
GKFE+A +M PD
Sbjct: 539 QGGKFEEAVKTYVDMEKSRCDPD 561
>AT5G39980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:16001036-16003072 REVERSE
Length = 678
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 119/311 (38%), Gaps = 45/311 (14%)
Query: 214 WNAALEELGRL-KDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLG 272
W +L L + ++ Y S YN ++ LRA++ D A+ + EM + D +T
Sbjct: 135 WQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYS 194
Query: 273 CFAHSLCKAGKWRDALTLIEKEE------------------------------------- 295
S K G + AL+ ++K E
Sbjct: 195 TLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRS 254
Query: 296 -FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRC 354
PD + Y MI+ +A LF EA + M +PN V+Y LL + +
Sbjct: 255 GITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEA 314
Query: 355 KRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG 414
+ + M C N ++ Y + A +L + K +P V YN ++
Sbjct: 315 LSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILR- 373
Query: 415 ICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMS 474
+ G +L + + L + +E VV + + + + + EKA N+++EM S
Sbjct: 374 VYGEAELFG-EAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTM----EHEKATNLVQEMQS 428
Query: 475 KGFIPDIGTYS 485
+G P+ TYS
Sbjct: 429 RGIEPNAITYS 439
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 118/281 (41%), Gaps = 16/281 (5%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
L R+ C ++ A+ RLK G + YN+++ V+ +A+ A L+ +EM+ G
Sbjct: 234 LSRRLCD---YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAG 290
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVP---DTILYTKMISGLCEASLFEEAM 320
++ + + K+ +AL++ + + V D MI + + +EA
Sbjct: 291 VLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEAD 350
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
+R PNVV+Y +L + G + LM + + +N+++ Y
Sbjct: 351 RLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIY 410
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIG--GICGNEDLPSMDVLELAETAYSEML 438
++ ++ A L+++M G +P + Y+ +I G G L+ A T + ++
Sbjct: 411 GKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGK--------LDRAATLFQKLR 462
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIP 479
GV +++V VG A ++ E+ IP
Sbjct: 463 SSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIP 503
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 98/249 (39%), Gaps = 19/249 (7%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N ++R Y + L+ A+ ++ + + +TYN ++ ++ + + + A + +EM +
Sbjct: 369 NTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQS 428
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEE 318
G ++ T KAGK A TL +K D +LY MI L
Sbjct: 429 RGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGH 488
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKR---ILSLMIMEGCFPSPGIFNS 375
A L+ ++ IP IL + GR + + G +F
Sbjct: 489 AKRLLHELKLPDNIPRETAITIL-------AKAGRTEEATWVFRQAFESGEVKDISVFGC 541
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYS 435
+++ Y R++ Y ++ +KM G P V +++ + E A+T Y
Sbjct: 542 MINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQRE------FEKADTVYR 595
Query: 436 EMLEVGVVL 444
EM E G V
Sbjct: 596 EMQEEGCVF 604
>AT1G79490.1 | Symbols: EMB2217 | EMB2217 (embryo defective 2217) |
chr1:29900617-29903127 FORWARD
Length = 836
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 134/358 (37%), Gaps = 44/358 (12%)
Query: 130 VAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREI 189
+ + L +VK + + F WA +Q Y + Y L + + N D + Q L E
Sbjct: 175 ITQSLKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGL----NQGRDFVGIQSLFEE 230
Query: 190 KDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKL 249
+D G D + A YN ++ +AEKL
Sbjct: 231 MVQDSSSHG---------------------------DLSFNA----YNQVIQYLAKAEKL 259
Query: 250 DTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKM 306
+ A+ ++ G +D+ T G A + +EK + + D Y +
Sbjct: 260 EVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELI 319
Query: 307 ISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGC 366
I L ++ + A +M+ P+ + L+ + +L ++ M G
Sbjct: 320 IPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGH 379
Query: 367 FPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDV 426
PS +F SL+ +Y ++ A +L +M K G +P + +Y ++I E
Sbjct: 380 RPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMII------ESHAKSGK 433
Query: 427 LELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
LE+A T + +M + G + S G G+ + A + M + G P + +Y
Sbjct: 434 LEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSY 491
>AT1G16830.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEE40 (maternal
effect embryo arrest 40) (TAIR:AT3G53700.1); Has 16848
Blast hits to 5324 proteins in 149 species: Archae - 2;
Bacteria - 6; Metazoa - 176; Fungi - 119; Plants -
16112; Viruses - 0; Other Eukaryotes - 433 (source: NCBI
BLink). | chr1:5760793-5762619 FORWARD
Length = 608
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 137/345 (39%), Gaps = 47/345 (13%)
Query: 144 IKFFIWAGRQIGYSHTQAVYNALLEMIESTNNN--SNDRIPEQFLREIKDEDKEVLGKLL 201
+ FF W +Q Y H ++ ++ ++E S DRI E+ +K E+ ++
Sbjct: 56 LNFFFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIER----LKISGCEIKPRVF 111
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
+L+ + + +++ A+E + FG+ + N ++ V + ++ A + +
Sbjct: 112 LLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRF 171
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMD 321
+ F+ C G D + + K++
Sbjct: 172 RNF----FSFDIALSHFCSRGGRGDLVGV--------------KIV-------------- 199
Query: 322 FLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYC 381
L RM PN + +L C R + +++ LMI G S +++ LV +
Sbjct: 200 -LKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFF 258
Query: 382 RSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMD-VLELAETAYSEMLEV 440
RS + A L KM++ GC P V Y LI G DL +D + SE L
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFV---DLGMVDEAFTVLSKVQSEGLAP 315
Query: 441 GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+VL + + + R +G+FE+A V + + +PD T++
Sbjct: 316 DIVLCNLMIHTYTR----LGRFEEARKVFTSLEKRKLVPDQYTFA 356
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 5/149 (3%)
Query: 225 KDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKW 284
KDF TY + R A +++ + +D+ SL + GK+
Sbjct: 413 KDFALDC--YTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKY 470
Query: 285 RDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRIL 341
A+ L ++ E++ D + YT I GL A EEA M+ PN TYR +
Sbjct: 471 NTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTI 530
Query: 342 LCGCLRKKQLGRCKRILSLMIMEGCFPSP 370
+ G ++K+ + ++IL I EG P
Sbjct: 531 ISGLCKEKETEKVRKILRECIQEGVELDP 559
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASL 315
MS +++D +T + +LC+ G R A+ + I KE+ D ++ +I L E
Sbjct: 410 MSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGK 469
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
+ A+ R +VV+Y + + G +R K++ + M G +P+ + +
Sbjct: 470 YNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRT 529
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQ----PGYVVYNIL 411
++ C+ ++ K+L++ ++ G + + VY++L
Sbjct: 530 IISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLL 569
>AT3G59040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21824233 REVERSE
Length = 583
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 3/191 (1%)
Query: 234 LTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL--- 290
++Y L+ + RA + + A V EM + G + +G A T+
Sbjct: 315 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 374
Query: 291 IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQ 350
+ ++ PD YT M+S AS E A F R++ + PN+VTY L+ G +
Sbjct: 375 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 434
Query: 351 LGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNI 410
+ + + M + G + I +++ A R +++ A K+M CG P N+
Sbjct: 435 VEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNV 494
Query: 411 LIGGICGNEDL 421
L+ ++L
Sbjct: 495 LLSLASTQDEL 505
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 124/334 (37%), Gaps = 18/334 (5%)
Query: 153 QIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNG 212
++G + Y AL+E +N E R ++ E ++++ + +
Sbjct: 167 KMGSTPNVISYTALMESYGRGGKCNN---AEAIFRRMQSSGPEPSAITYQIILKTFVEGD 223
Query: 213 LWNAALEELGRL---KDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSF 269
+ A E L K K + Y+ ++ ++ +A + A V M G +
Sbjct: 224 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 283
Query: 270 T---LGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRM 326
T L F S + K D + ++ + PD + Y +I A EEA+ M
Sbjct: 284 TYNSLMSFETSYKEVSKIYDQM---QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 340
Query: 327 RANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDY 386
P Y ILL + + K + M + FP + +++ AY + D
Sbjct: 341 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 400
Query: 387 SYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNK 446
A K K++ G +P V Y LI G D+ M +E+ Y +M G+ N+
Sbjct: 401 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM--MEV----YEKMRLSGIKANQ 454
Query: 447 VNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
++ F A +EM S G PD
Sbjct: 455 TILTTIMDASGRCKNFGSALGWYKEMESCGVPPD 488
>AT5G46680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18941118-18942524 FORWARD
Length = 468
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 15/217 (6%)
Query: 275 AHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSC 331
+SLCK A TL+ + +PD I Y +I G +EA RMR
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 332 IPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYK 391
P+V TY L+ G + L R ++ M+ G P +N+L+ Y + + A+K
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 392 LLKKMVK-CGCQPGYVVYNILIGGIC--GNEDLPSMDVLELAETAYSEMLEVGVVLNKVN 448
+L + + G PG YNIL+ +C G+ D L E++ +++N
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILING-- 197
Query: 449 VSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
LC + ++RE+ G+ P+ TY+
Sbjct: 198 -------LCKSRRVGSVDWMMRELKKSGYTPNAVTYT 227
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 5/219 (2%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N+L+ C++G + A+E LK K +TYN L+ ++ ++ + + RE+
Sbjct: 158 NILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKK 216
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEE 318
GY+ ++ T K + L L ++KE + D ++S L + EE
Sbjct: 217 SGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEE 276
Query: 319 AMDFLNRM-RANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
A + ++ + R+ + ++V+Y LL + L +L + M+G P +V
Sbjct: 277 AYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIV 336
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC 416
+ + A K L + + G QP V N LI G+C
Sbjct: 337 NGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLC 375
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 97/239 (40%), Gaps = 8/239 (3%)
Query: 162 VYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEEL 221
YN LL+ + + + N + + +K K L N+LI C++ + +
Sbjct: 156 TYNILLDALCKSGHTDN---AIELFKHLKSRVKPEL-MTYNILINGLCKSRRVGSVDWMM 211
Query: 222 GRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKA 281
LK GY + +TY ++ ++ + ++++ + +M GY+ D F +L K
Sbjct: 212 RELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKT 271
Query: 282 GKWRDAL----TLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVT 337
G+ +A L+ D + Y +++ + + D L + P+ T
Sbjct: 272 GRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYT 331
Query: 338 YRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKM 396
+ I++ G L G ++ L+ + G PS N L+ C++ A +L M
Sbjct: 332 HTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM 390
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 91/203 (44%), Gaps = 5/203 (2%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N LI+ Y + + A R+++ G + TYN+L+ + L+ + EM +
Sbjct: 52 NTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLH 111
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE----EFVPDTILYTKMISGLCEASLFE 317
G S D ++ K G+ +A ++ ++ VP Y ++ LC++ +
Sbjct: 112 SGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTD 171
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
A++ +++ P ++TY IL+ G + +++G ++ + G P+ + +++
Sbjct: 172 NAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTML 230
Query: 378 HAYCRSRDYSYAYKLLKKMVKCG 400
Y +++ +L KM K G
Sbjct: 231 KMYFKTKRIEKGLQLFLKMKKEG 253
>AT3G21470.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:7563746-7565074 FORWARD
Length = 442
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 5/237 (2%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ N LI Y QNG + A++ ++ GY+ +T ++++ ++ +LD VH +
Sbjct: 160 IWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLI 219
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEA 319
++ G ++ F K G +A ++ E V MIS L +EA
Sbjct: 220 NHRGIELNQFVSNALIDMYAKCGDLENATSVFESIS-VRSVACCNSMISCLAIHGKGKEA 278
Query: 320 MDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHA 379
++ + M + P+ +T+ +L C+ L +I S M + P+ F L+H
Sbjct: 279 LEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHL 338
Query: 380 YCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLP-SMDVLELAETAYS 435
RS AY+L+K+M +P V L+G + D + V+++ ETA S
Sbjct: 339 LGRSGKLKEAYRLVKEM---HVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGS 392
>AT3G59040.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21821495-21823919 REVERSE
Length = 590
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 3/191 (1%)
Query: 234 LTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTL--- 290
++Y L+ + RA + + A V EM + G + +G A T+
Sbjct: 322 VSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKS 381
Query: 291 IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQ 350
+ ++ PD YT M+S AS E A F R++ + PN+VTY L+ G +
Sbjct: 382 MRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAND 441
Query: 351 LGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNI 410
+ + + M + G + I +++ A R +++ A K+M CG P N+
Sbjct: 442 VEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNV 501
Query: 411 LIGGICGNEDL 421
L+ ++L
Sbjct: 502 LLSLASTQDEL 512
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 124/334 (37%), Gaps = 18/334 (5%)
Query: 153 QIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNG 212
++G + Y AL+E +N E R ++ E ++++ + +
Sbjct: 174 KMGSTPNVISYTALMESYGRGGKCNN---AEAIFRRMQSSGPEPSAITYQIILKTFVEGD 230
Query: 213 LWNAALEELGRL---KDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSF 269
+ A E L K K + Y+ ++ ++ +A + A V M G +
Sbjct: 231 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 290
Query: 270 T---LGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRM 326
T L F S + K D + ++ + PD + Y +I A EEA+ M
Sbjct: 291 TYNSLMSFETSYKEVSKIYDQM---QRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 347
Query: 327 RANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDY 386
P Y ILL + + K + M + FP + +++ AY + D
Sbjct: 348 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 407
Query: 387 SYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNK 446
A K K++ G +P V Y LI G D+ M +E+ Y +M G+ N+
Sbjct: 408 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM--MEV----YEKMRLSGIKANQ 461
Query: 447 VNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
++ F A +EM S G PD
Sbjct: 462 TILTTIMDASGRCKNFGSALGWYKEMESCGVPPD 495
>AT5G61370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24672008-24673471 REVERSE
Length = 487
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 133/315 (42%), Gaps = 16/315 (5%)
Query: 118 LRQFREKLSESLVAEVLNLVKN---PELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTN 174
L Q S +LV +V+ KN P ++FF W+ + +G S +N +L ++
Sbjct: 58 LNQVSVSPSSNLVTQVIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKK 117
Query: 175 NNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRL 234
+++ +I L +++ E++ + + +++ + G A+ L F
Sbjct: 118 DHTAMQI---LLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGF 174
Query: 235 TYNALVIVFLRAEKLDTAYLVHREMSNL--GYSMDSFTLGCFAHSLCKAGK-WRDALTLI 291
T A++ + A V ++ G + + F S+ + K R + +
Sbjct: 175 TVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDM 234
Query: 292 EKEEFVPDTILYTKMISGLCE-------ASLFEEAMDFLNRMRANSCIPNVVTYRILLCG 344
+ PD + +++ LCE + L EA++ + MR+ P ++Y ILL
Sbjct: 235 KSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSC 294
Query: 345 CLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPG 404
R +++ +IL M GC P G + +V + + +++ +M++ G +P
Sbjct: 295 LGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPE 354
Query: 405 YVVYNILIGGICGNE 419
Y LIG +CG E
Sbjct: 355 RKFYYDLIGVLCGVE 369
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 147/370 (39%), Gaps = 55/370 (14%)
Query: 126 SESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQF 185
SE+ + EV+ +V +P G+ Q+ S + N + ++IES N ++ P +
Sbjct: 33 SETALHEVIRIVSSPVGGLDDLEENLNQVSVSPSS---NLVTQVIESCKNETS---PRRL 86
Query: 186 LREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLR 245
LR K LG L+ + +N L L KD + A+ I+
Sbjct: 87 LRFFSWSCKS-LGSSLH--------DKEFNYVLRVLAEKKD---------HTAMQILLSD 128
Query: 246 AEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDAL---TLIEKEEFVPDTIL 302
K + A MD T A +L K GK DA+ +++K D
Sbjct: 129 LRKENRA-------------MDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFT 175
Query: 303 YTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMI 362
T +IS LC + A+ ++ + + YR LL G ++ + +R++ M
Sbjct: 176 VTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMK 235
Query: 363 MEGCFPSPGIFNSLVHAYCR---SRDYS----YAYKLLKKMVKCGCQPGYVVYNILIGGI 415
G P FNSL+ C +R+ S A ++ +M QP + YNIL+ +
Sbjct: 236 SAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCL 295
Query: 416 CGNEDL-PSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMS 474
+ S +LE +M G + + R L G+F K ++ EM+
Sbjct: 296 GRTRRVRESCQILE-------QMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIE 348
Query: 475 KGFIPDIGTY 484
+GF P+ Y
Sbjct: 349 RGFRPERKFY 358
>AT1G80150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30148738-30149931 FORWARD
Length = 397
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 6/185 (3%)
Query: 299 DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRIL 358
D + + I CE + + A + M + P+VVTY L+ + ++ +
Sbjct: 176 DAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLW 235
Query: 359 SLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
+LM+++GC P+ FN + R A LL M K +P + YN++I G
Sbjct: 236 NLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 419 EDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFI 478
P M AE Y+ M G N LC G F+ A+ + ++ M K +
Sbjct: 296 R-FPDM-----AERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWY 349
Query: 479 PDIGT 483
P++ T
Sbjct: 350 PNLDT 354
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 111/268 (41%), Gaps = 40/268 (14%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAY-LVHREMSNL 262
+I Y + G+ AL+ + +G K S ++NA + V L T + +H S
Sbjct: 112 IIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKY 171
Query: 263 GYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGL--------- 310
G +D+ + S C+ G A + +EK PD + YT +IS L
Sbjct: 172 GIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIG 231
Query: 311 -----------CEASL--FEEAMDFL-NRMRA---NSCI---------PNVVTYRILLCG 344
C+ +L F + FL NR RA N + P+ +TY +++ G
Sbjct: 232 NGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKG 291
Query: 345 CLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPG 404
+ +R+ + M +G P+ I+ +++H C++ ++ AY + K ++ P
Sbjct: 292 FFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPN 351
Query: 405 YVVYNILIGGICGNEDL-PSMDVLELAE 431
+L+ G+ L + ++EL
Sbjct: 352 LDTVEMLLKGLVKKGQLDQAKSIMELVH 379
>AT2G17670.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:7674420-7675575 FORWARD
Length = 349
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 4/185 (2%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM-S 260
++ +R C+ G + A + + L + TYN L+ + + L Y EM
Sbjct: 163 DIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRD 222
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFE 317
+ D + ++C + R+A+ L+ K F PD LY ++ G C S
Sbjct: 223 DFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS 282
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
EA+ +M+ P+ +TY L+ G + ++ + L M+ G P + SL+
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 378 HAYCR 382
+ CR
Sbjct: 343 NGMCR 347
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 19/205 (9%)
Query: 288 LTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLR 347
L L+ PD + + LCE +EA D + + P+ TY LL
Sbjct: 147 LNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLL----- 201
Query: 348 KKQLGRCKRILSLM----IMEGCF---PSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCG 400
K L +CK + + M F P F L+ C S++ A L+ K+ G
Sbjct: 202 -KHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAG 260
Query: 401 CQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVG 460
+P +YN ++ G C ++ A Y +M E GV +++ + L G
Sbjct: 261 FKPDCFLYNTIMKGFC------TLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAG 314
Query: 461 KFEKAFNVIREMMSKGFIPDIGTYS 485
+ E+A ++ M+ G+ PD TY+
Sbjct: 315 RVEEARMYLKTMVDAGYEPDTATYT 339
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
Query: 183 EQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKD-FGYKASRLTYNALVI 241
+ ++E+ ++ N L++ C+ + E + ++D F K +++ L+
Sbjct: 179 KDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILID 238
Query: 242 VFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK--EEFV-P 298
++ L A + ++ N G+ D F C K +A+ + +K EE V P
Sbjct: 239 NVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEP 298
Query: 299 DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRK 348
D I Y +I GL +A EEA +L M P+ TY L+ G RK
Sbjct: 299 DQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRK 348
>AT4G39620.1 | Symbols: EMB2453 | EMB2453 (embryo defective 2453) |
chr4:18395294-18397578 FORWARD
Length = 563
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 124/302 (41%), Gaps = 22/302 (7%)
Query: 193 DKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFL----RAEK 248
D V KL++V+ +K G A+ +K+ G + YNAL+ L +A+
Sbjct: 132 DNGVYSKLISVMGKK----GQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKA 187
Query: 249 LDTAYLVHREMSNLGYSM-DSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYT 304
L+ +M + + T + ++GK L ++ PD +
Sbjct: 188 LEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFN 247
Query: 305 KMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIME 364
++ + + +E L RMR+N C P+++T+ +L+ +K++ + ++ ++
Sbjct: 248 GVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRS 307
Query: 365 GCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYN--ILIGGICGNEDLP 422
P+ FNS++ Y ++R A + KKM P ++ Y I++ G CG+
Sbjct: 308 KEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS---- 363
Query: 423 SMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIG 482
+ A + E+ E VL ++ C G + +A + + PD
Sbjct: 364 ----VSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDAS 419
Query: 483 TY 484
TY
Sbjct: 420 TY 421
>AT3G18020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6165449-6167515 FORWARD
Length = 688
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 121/296 (40%), Gaps = 34/296 (11%)
Query: 224 LKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCK--- 280
+K G K R +YNA++ + AY + E S + +T SLCK
Sbjct: 333 MKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELD 392
Query: 281 AGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRI 340
GK R+ L L+ ++E T +Y + GLC E ++ L M C P+ T
Sbjct: 393 TGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNT 452
Query: 341 LLCGCLRKKQLGRCKRILS-LMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKK-MVK 398
++ G + ++ ++L +M + C P N+++ A +L + M +
Sbjct: 453 VINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPE 512
Query: 399 CGCQPGYVVYNILIGGIC----GNEDLPSMDVLELAE-----TAYSEMLEVGVVLNKVNV 449
+PG V YN +I G+ G+E + LE A T Y+ +++ V NKV++
Sbjct: 513 NKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDM 572
Query: 450 SN--------------------FARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ F + LC G A + + ++ G IP++ Y+
Sbjct: 573 AKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYN 628
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 10/217 (4%)
Query: 263 GYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEEA 319
GY DS L HSLC AG++ +A L F+PD +I+ L +
Sbjct: 85 GYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVST 144
Query: 320 MDFLNRMRA--NSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
+ ++R+ +P++ Y L+ ++ +++ M G P F +L+
Sbjct: 145 LGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLI 204
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVL--ELAETAYS 435
YC R+ A+K+ +M CG +P + ++LIGG D+ + L EL E +
Sbjct: 205 GGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKN 264
Query: 436 EMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREM 472
E + +N +C G F F + M
Sbjct: 265 ---ETDTSMKAAAFANLVDSMCREGYFNDIFEIAENM 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 117/296 (39%), Gaps = 23/296 (7%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM- 259
LI YC+ A + ++ G + + LT + L+ FL+ ++T + +E+
Sbjct: 200 FTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELW 259
Query: 260 ----SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKE---EFVPDTILYTKMISGLCE 312
+ SM + S+C+ G + D + E E V Y MI LC
Sbjct: 260 EYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCR 319
Query: 313 ASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGC----FP 368
A + M++ P +Y ++ G + G C R L+ EG FP
Sbjct: 320 YRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKD---GGCMRAYQLL-EEGSEFEFFP 375
Query: 369 SPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLE 428
S + L+ + C+ D A +L+ M++ +YNI + G+C MD
Sbjct: 376 SEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLC------VMDNPT 429
Query: 429 LAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGF-IPDIGT 483
ML+ ++ ++ LC +G+ + A V+ +MM+ F PD T
Sbjct: 430 EILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVT 485
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 85/223 (38%), Gaps = 11/223 (4%)
Query: 267 DSFTLGCFAHSLCKAGKWRDALTLIEK----EEFVPDTILYTKMISGLCEASLFEEAMDF 322
D +TL + LCK G+ DA+ +++ + PD + ++ GL EEA+D
Sbjct: 446 DEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDV 505
Query: 323 LNR-MRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYC 381
LNR M N P VV Y ++ G + + + + + ++ C
Sbjct: 506 LNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLC 565
Query: 382 RSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVG 441
+ A K ++ + VY + G+C + L A ++ + G
Sbjct: 566 VTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSD------ACHFLYDLADSG 619
Query: 442 VVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
+ N V + G +A+ ++ EM G PD T+
Sbjct: 620 AIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTW 662
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 68/176 (38%), Gaps = 12/176 (6%)
Query: 201 LNVLIRKYCQNGLWNAALEELGR-LKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
LN ++ G AL+ L R + + K + YNA++ + K D A V ++
Sbjct: 486 LNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQL 545
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGK-------WRDALTLIEKEEFVPDTILYTKMISGLCE 312
+ DS T LC K W D + + D +Y + GLC+
Sbjct: 546 EKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRH----DAFVYAAFLKGLCQ 601
Query: 313 ASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFP 368
+ +A FL + + IPNVV Y ++ C R +IL M G P
Sbjct: 602 SGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAP 657
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 3/143 (2%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N +IR + + A+ G+L+ A TY ++ K+D A ++
Sbjct: 523 NAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIW 582
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
D+F F LC++G DA L + +P+ + Y +I+ + L E
Sbjct: 583 PSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKRE 642
Query: 319 AMDFLNRMRANSCIPNVVTYRIL 341
A L MR N P+ VT+RIL
Sbjct: 643 AYQILEEMRKNGQAPDAVTWRIL 665
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 276 HSLCKAGKWRD-ALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSC 331
HS+C + D AL +++ + PD++ + +I LC+A F+EA A+
Sbjct: 62 HSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGF 121
Query: 332 IPNVVTYRILLCGCLRKKQ----LGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYS 387
IP+ T +++ L + LG R++ + PS +N L++ C
Sbjct: 122 IPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFK--KEFVPSLTNYNRLMNQLCTIYRVI 179
Query: 388 YAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKV 447
A+KL+ M G P V + LIGG C + LE+A + EM G+ N +
Sbjct: 180 DAHKLVFDMRNRGHLPDVVTFTTLIGGYC------EIRELEVAHKVFDEMRVCGIRPNSL 233
Query: 448 NVS 450
+S
Sbjct: 234 TLS 236
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 19/226 (8%)
Query: 269 FTLGCFAHSLCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFEEAMDFLNR 325
F G SLC+ + A ++ + + P Y +I GLC+ A L
Sbjct: 308 FAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEE 367
Query: 326 MRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRD 385
P+ TY++L+ ++ G+ + +L LM+ + I+N + C +
Sbjct: 368 GSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDN 427
Query: 386 YSYAYKLLKKMVKCGCQPGYVVYNILIGGIC--GNEDLPSMDVLELAETAYSEMLEVGVV 443
+ +L M++ C+P N +I G+C G D +M VL+ T + V
Sbjct: 428 PTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVD-DAMKVLDDMMTGKFCAPD-AVT 485
Query: 444 LNKVNVSNFARCLCGV---GKFEKAFNVIREMMSKGFI-PDIGTYS 485
LN V +CG+ G+ E+A +V+ +M + I P + Y+
Sbjct: 486 LNTV--------MCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYN 523
>AT1G19720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6819926-6822610 REVERSE
Length = 894
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 126/337 (37%), Gaps = 90/337 (26%)
Query: 184 QFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF 243
+F R +++ D V+ N ++ YCQNG A+E + ++ G +T+N L+ +
Sbjct: 237 KFFRRMRERD--VIA--WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGY 292
Query: 244 LRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILY 303
+ K D A + ++M G + D FT +
Sbjct: 293 NQLGKCDAAMDLMQKMETFGITADVFT--------------------------------W 320
Query: 304 TKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIM 363
T MISGL + +A+D +M +PN VT + C K + + + S+ +
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK 380
Query: 364 EG--------------------------CFPSPG-----IFNSLVHAYCRSRDYSYAYKL 392
G F S +NS++ YC++ AY+L
Sbjct: 381 MGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYEL 440
Query: 393 LKKMVKCGCQPGYVVYNILIGGICGNEDL-PSMDVLELAE--------TAYSEMLEVGVV 443
+M +P + +N +I G N D +MD+ + E TA ++ G +
Sbjct: 441 FTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYI 500
Query: 444 LNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
N GK ++A + R+M F+P+
Sbjct: 501 QN--------------GKKDEALELFRKMQFSRFMPN 523
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 27/225 (12%)
Query: 269 FTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEEA---MDF 322
FT + + +WR+ L+ K+ +PD L+ K++ G E
Sbjct: 147 FTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSV 206
Query: 323 LNRMRANSC--IPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
+ ++ +SC + N + CG +L + M +NS++ AY
Sbjct: 207 VIKLGMSSCLRVSNSILAVYAKCG-----ELDFATKFFRRMRERDVIA----WNSVLLAY 257
Query: 381 CRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI--CGNEDLPSMDVLELAETAYSEML 438
C++ + A +L+K+M K G PG V +NILIGG G D +MD+++ ET
Sbjct: 258 CQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCD-AAMDLMQKMET------ 310
Query: 439 EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGT 483
G+ + + L G +A ++ R+M G +P+ T
Sbjct: 311 -FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 354
>AT3G09650.1 | Symbols: HCF152, CRM3 | HCF152 (HIGH CHLOROPHYLL
FLUORESCENCE 152); mRNA binding | chr3:2958704-2961040
FORWARD
Length = 778
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 89/225 (39%), Gaps = 8/225 (3%)
Query: 199 KLLNVLIRKYCQNG-LWNAA--LEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLV 255
++ L++ Y +NG + + A LE + R D +TY +V F+ A +D A V
Sbjct: 415 RIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQV 474
Query: 256 HREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLI----EKEEFVPDTILYTKMISGLC 311
EM+ +G + T CK + A L+ E PD + Y +I G
Sbjct: 475 LAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCI 534
Query: 312 EASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPG 371
A+ F N MR P ++Y L+ Q R+ M+ +
Sbjct: 535 LIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDL 594
Query: 372 I-FNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
I +N LV YCR A +++ +M + G P Y L G+
Sbjct: 595 IAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGV 639
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 10/183 (5%)
Query: 296 FVPDTILYTKMISGLCEASLFEEAMDFLNRMRAN---SCIPNVVTYRILLCGCLRKKQLG 352
F PD+ +YT ++ G + + L MR + P+ VTY ++ + +
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 353 RCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVK-CGCQPGYVVYNIL 411
R +++L+ M G + +N L+ YC+ A LL++M + G +P V YNI+
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 412 IGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIRE 471
I G +D S L ++EM G+ K++ + + G+ + A V E
Sbjct: 530 IDGCILIDD--SAGALAF----FNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDE 583
Query: 472 MMS 474
MM+
Sbjct: 584 MMN 586
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 8/189 (4%)
Query: 298 PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRI 357
PD + YT ++S A L + A L M N +TY +LL G ++ Q+ R + +
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 358 LSLMIME-GCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC 416
L M + G P +N ++ D + A +M G P + Y L+
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 417 GNEDLPSMDVLELAETAYSEML-EVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSK 475
+ +LA + EM+ + V ++ + + C +G E A V+ M
Sbjct: 570 MSGQ------PKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKEN 623
Query: 476 GFIPDIGTY 484
GF P++ TY
Sbjct: 624 GFYPNVATY 632
>AT1G10270.1 | Symbols: GRP23 | GRP23 (GLUTAMINE-RICH PROTEIN23);
binding | chr1:3363535-3366276 FORWARD
Length = 913
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 110/255 (43%), Gaps = 13/255 (5%)
Query: 233 RLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE 292
RL + V +RA LD A + R+ FT ++ +A ++ ++++L +
Sbjct: 145 RLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQ 204
Query: 293 ----KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCI-PNVVTYRILLCGCLR 347
+ VP+ + Y ++I+ C+ +EA++ + AN+ P+ VTYR L G ++
Sbjct: 205 YFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQ 264
Query: 348 KKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKM-VKCGCQPGYV 406
++G +L M+ +G ++N+L+ Y D+ A + ++ KC G V
Sbjct: 265 AGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIV 324
Query: 407 VYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAF 466
+ D +M+ +Y +L+ ++ + GK ++A+
Sbjct: 325 NATFMEYWFEKGNDKEAME-------SYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAW 377
Query: 467 NVIREMMSKGFIPDI 481
+ EM+ P+I
Sbjct: 378 ALFNEMLDNHAPPNI 392
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 113/249 (45%), Gaps = 30/249 (12%)
Query: 217 ALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM------SNLGYSMDSFT 270
A+E L D ++ T N L+ VFL+ K D A+ + EM N+ S++S T
Sbjct: 341 AMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNI-LSVNSDT 399
Query: 271 LGCFAHSLCKAGKWRDALTLIEK-------EEFVPDTILYTKMISGLCEASLFEEAMDFL 323
+G + K G++ +A+ +K + FV D + Y +++ CE + EA F
Sbjct: 400 VGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFF 459
Query: 324 NRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMI-----MEGCFPSPGIFNSLVH 378
+ S + ++R ++ L+ +++ ++L M+ + F + +F L+
Sbjct: 460 AEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGA-RVFGELI- 517
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEML 438
++ + + ++L KM + +P +Y++++ G+C D L+ A+ EM+
Sbjct: 518 ---KNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDG------DALDQAKDIVGEMI 568
Query: 439 EVGVVLNKV 447
V + V
Sbjct: 569 RHNVGVTTV 577
>AT4G36680.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17292479-17293717 REVERSE
Length = 412
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 98/239 (41%), Gaps = 6/239 (2%)
Query: 183 EQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIV 242
E + K++ K + LIR Y Q ++N A+ ++ +G S +++NAL+
Sbjct: 87 ETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNA 146
Query: 243 FLRAEKLDTAYLVHREMSNLGYSM--DSFTLGCFAHSLCKAGKWRDALTLIEKEE---FV 297
L ++ D + E+ + D + G S C +G A+ ++ + +
Sbjct: 147 CLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGME 206
Query: 298 PDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRI 357
TI +T ++S L + E A + N M C + Y + + +K+ R K +
Sbjct: 207 VTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSA-QKESPERVKEL 265
Query: 358 LSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC 416
+ M G P +N L+ AYC A K+ + + C P + LI +C
Sbjct: 266 IEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLC 324
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE
Length = 711
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 109/260 (41%), Gaps = 11/260 (4%)
Query: 221 LGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCK 280
L +KD G + +TY+ ++ R + A M G D T K
Sbjct: 210 LEMVKD-GVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSK 268
Query: 281 AGKWRDALTLIEK---EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVT 337
+GK + L+L E+ + PD I ++ + EA ++ L M++ PNVV
Sbjct: 269 SGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVV 328
Query: 338 YRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMV 397
Y LL R + G + + + M+ G P+ +LV Y ++R A +L ++M
Sbjct: 329 YNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMK 388
Query: 398 KCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLE-VGVVLNKVNVSNFARCL 456
+++YN L+ +C + + + E AE +++M E V + + +
Sbjct: 389 AKKWPMDFILYNTLL-NMCAD-----IGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIY 442
Query: 457 CGVGKFEKAFNVIREMMSKG 476
GK EKA + EM+ G
Sbjct: 443 GSGGKAEKAMELFEEMLKAG 462
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 12/190 (6%)
Query: 299 DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRIL 358
D I Y+ +I+ +L+ +A+++ RM +P+ VTY +L + G+ + +L
Sbjct: 220 DNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKS---GKVEEVL 276
Query: 359 SL---MIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
SL + G P F+ L + + DY +L++M +P VVYN L+ +
Sbjct: 277 SLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAM 336
Query: 416 CGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSK 475
G P LA + ++EMLE G+ N+ ++ + A + EM +K
Sbjct: 337 -GRAGKPG-----LARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK 390
Query: 476 GFIPDIGTYS 485
+ D Y+
Sbjct: 391 KWPMDFILYN 400
>AT5G48730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19763152-19765136 FORWARD
Length = 495
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 134/328 (40%), Gaps = 57/328 (17%)
Query: 214 WNAALEELGRLKD-FGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLG 272
W +A++ L++ YK + Y L+++ + ++ + A+ + +EM N G ++
Sbjct: 130 WESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYT 189
Query: 273 CFAHSLCKAGKWRDALTLIEK----EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRA 328
+ ++G++ A TL+E+ PD Y+ +I + F++ D L+ MR
Sbjct: 190 ALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRR 249
Query: 329 NSCIPNVVTYRILLCGCLRKKQLGRCKRILSLM--------------IMEGC---FPSPG 371
PN +T+ + ++ CK M +ME C F S G
Sbjct: 250 QGIRPNTITFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSG 309
Query: 372 I------FNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMD 425
I FN L+ +Y +S +Y +++ M K V YN++I DL M+
Sbjct: 310 IEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQME 369
Query: 426 VL-ELAET---------------AY---SEMLEVGVVLNKVNVSN------FARCLCG-- 458
L L ++ AY S+ ++G VL + S+ F CL
Sbjct: 370 YLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAY 429
Query: 459 --VGKFEKAFNVIREMMSKGFIPDIGTY 484
+ KF + V+ M KGF PD TY
Sbjct: 430 GRMEKFAEMKGVLELMEKKGFKPDKITY 457
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 31/232 (13%)
Query: 285 RDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCI------------ 332
R A+++I + E I K L ++ E + + +R S I
Sbjct: 87 RKAISIILRREATKSIIEKKKGSKKLLPRTVLESLHERITALRWESAIQVFELLREQLWY 146
Query: 333 -PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYK 391
PNV Y L+ + KQ + + MI EGC + ++ +LV AY RS + A+
Sbjct: 147 KPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFT 206
Query: 392 LLKKMVKC-GCQPGYVVYNILIGGIC------GNEDLPS-----------MDVLELAETA 433
LL++M CQP Y+ILI +DL S + +E+ T
Sbjct: 207 LLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITFVEMESTL 266
Query: 434 YSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
+ E + +++ R G G+ E N + S G P+I T++
Sbjct: 267 IQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFN 318
>AT4G38150.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17901211-17902119 REVERSE
Length = 302
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 24/236 (10%)
Query: 244 LRAEKLDTAY--LVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTI 301
LR E+ ++ R+ NLG S + + F K G +D+ + E++ P
Sbjct: 54 LRGERSSNSHREPPARQAHNLGKSDTTLSDDGFLEQF-KLGVNQDSRETPKPEQY-PQEP 111
Query: 302 LYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLM 361
L E++ + +M+ IPN V +L G + + ++ LM
Sbjct: 112 LPPP-----------EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLM 157
Query: 362 IMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDL 421
+G P I+ ++V A+C++ A ++ +KM G P Y +L+ G+
Sbjct: 158 RDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLY----- 212
Query: 422 PSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGF 477
+ ++L+ A SEMLE G N LC V E+A + I + KGF
Sbjct: 213 -NCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 154 IGYSHTQAVYNALLEMIE-STNNNSNDRI-PEQFLREI---KDEDKEVLGKLLN------ 202
+G S T + LE + N +S + PEQ+ +E ++ E+ K+
Sbjct: 74 LGKSDTTLSDDGFLEQFKLGVNQDSRETPKPEQYPQEPLPPPEDSDEIFKKMKEGGLIPN 133
Query: 203 --VLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
++ C++GL A++ G ++D G + Y A+V F +A K++ A + R+M
Sbjct: 134 AVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQ 193
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFE 317
N G + ++F+ G L DA+ + P+ + +++ LC E
Sbjct: 194 NNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVE 253
Query: 318 E---AMDFLNR 325
+ A+D LN+
Sbjct: 254 QAQSAIDTLNQ 264
>AT4G38150.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17901211-17902119 REVERSE
Length = 302
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 24/236 (10%)
Query: 244 LRAEKLDTAY--LVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTI 301
LR E+ ++ R+ NLG S + + F K G +D+ + E++ P
Sbjct: 54 LRGERSSNSHREPPARQAHNLGKSDTTLSDDGFLEQF-KLGVNQDSRETPKPEQY-PQEP 111
Query: 302 LYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLM 361
L E++ + +M+ IPN V +L G + + ++ LM
Sbjct: 112 LPPP-----------EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLM 157
Query: 362 IMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDL 421
+G P I+ ++V A+C++ A ++ +KM G P Y +L+ G+
Sbjct: 158 RDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLY----- 212
Query: 422 PSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGF 477
+ ++L+ A SEMLE G N LC V E+A + I + KGF
Sbjct: 213 -NCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 154 IGYSHTQAVYNALLEMIE-STNNNSNDRI-PEQFLREI---KDEDKEVLGKLLN------ 202
+G S T + LE + N +S + PEQ+ +E ++ E+ K+
Sbjct: 74 LGKSDTTLSDDGFLEQFKLGVNQDSRETPKPEQYPQEPLPPPEDSDEIFKKMKEGGLIPN 133
Query: 203 --VLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
++ C++GL A++ G ++D G + Y A+V F +A K++ A + R+M
Sbjct: 134 AVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQ 193
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE---KEEFVPDTILYTKMISGLCEASLFE 317
N G + ++F+ G L DA+ + P+ + +++ LC E
Sbjct: 194 NNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVE 253
Query: 318 E---AMDFLNR 325
+ A+D LN+
Sbjct: 254 QAQSAIDTLNQ 264
>AT1G80550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30285358-30286704 REVERSE
Length = 448
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 151/399 (37%), Gaps = 28/399 (7%)
Query: 97 VLISNAILNNDDGFGSKTQKFLRQFREKLS---ESLVAEVLNLVKNP-ELGIKFFIWAGR 152
+L I N DD KF Q E S + V E L N + ++FF W R
Sbjct: 20 LLSVKPISNVDDA------KFRSQEEEDQSSYDQKTVCEALTCYSNDWQKALEFFNWVER 73
Query: 153 QIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKL-LNVLIRKYCQN 211
+ G+ HT +N +++++ I + + + V + ++ ++Y
Sbjct: 74 ESGFRHTTETFNRVIDIL---GKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTA 130
Query: 212 GLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVH-REMSNLGYSMDSFT 270
L A++ +L DF + YN + + ++ L + + G+S+ +
Sbjct: 131 HLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTK 190
Query: 271 L-GCFAHSLCKAGKW---RDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRM 326
+ K G W ++ ++ E D Y+ + +C++ +A+ M
Sbjct: 191 IHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEM 250
Query: 327 RANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDY 386
++ +VV Y ++ + + R+ M GC P+ N+++ C
Sbjct: 251 KSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRM 310
Query: 387 SYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNK 446
AY++L +M K GCQP + Y L + + PS ++L L + M+ GV
Sbjct: 311 RDAYRMLDEMPKRGCQPDSITYMCLFSRL----EKPS-EILSL----FGRMIRSGVRPKM 361
Query: 447 VNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
R G + V + M G PD Y+
Sbjct: 362 DTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYN 400
>AT3G46610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17160224-17162221 REVERSE
Length = 665
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 112/295 (37%), Gaps = 51/295 (17%)
Query: 147 FIW-AGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLI 205
IW G+ + +Y LL+ NN S + + F N+L+
Sbjct: 387 LIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHF----------------NILL 430
Query: 206 RKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYS 265
+ G+W + L +++D G K R +NA+++ +A + A + + M + G
Sbjct: 431 SAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNG-- 488
Query: 266 MDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNR 325
EK P I Y ++S L + L++EA N
Sbjct: 489 --------------------------EK----PTVISYGALLSALEKGKLYDEAFRVWNH 518
Query: 326 MRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRD 385
M PN+ Y + +++ +L M +G PS FN+++ R+
Sbjct: 519 MIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGL 578
Query: 386 YSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEV 440
AY+ +M +P + Y +LI + N+ P + EL A +E L++
Sbjct: 579 SGVAYEWFHRMKSENVEPNEITYEMLIEALA-NDAKPRL-AYELHVKAQNEGLKL 631
>AT1G55890.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20901364-20902560 FORWARD
Length = 398
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 108/266 (40%), Gaps = 15/266 (5%)
Query: 218 LEELGRLKDFGYKASRLTYNALVI-VFLRAEKLDTAYLVHREMSNLG--YSMDSFTLGCF 274
LEE + +D S+ + A +I ++ +A + A V EM N S+ SF
Sbjct: 97 LEEQKKYRDM----SKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLS 152
Query: 275 AHSLCKAGKWRDAL--TLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCI 332
A+ L K + L L K PD + Y +I LCE EA+ L+ +
Sbjct: 153 AYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLK 212
Query: 333 PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKL 392
P++VT+ LL K Q + I + M+ + +N+ + L
Sbjct: 213 PDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNL 272
Query: 393 LKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNF 452
++ G +P +N +I G NE MD AE Y E+++ G +K +
Sbjct: 273 FGELKASGLKPDVFSFNAMIRGSI-NEG--KMDE---AEAWYKEIVKHGYRPDKATFALL 326
Query: 453 ARCLCGVGKFEKAFNVIREMMSKGFI 478
+C G FE A + +E SK ++
Sbjct: 327 LPAMCKAGDFESAIELFKETFSKRYL 352
>AT1G63320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23488884-23489530 REVERSE
Length = 189
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 66/172 (38%), Gaps = 23/172 (13%)
Query: 228 GYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA 287
G + +TY L+ +A D A + +EM + G D T LCK GK A
Sbjct: 11 GLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKA 70
Query: 288 LTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLR 347
L A E+ D + PNVVTY ++ G +
Sbjct: 71 LV-----------------------AGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCK 107
Query: 348 KKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKC 399
K + M +G P G +N+L+ A+ R D + + +L+K+M C
Sbjct: 108 KGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSC 159
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
Query: 361 MIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNED 420
M G + + +L+ ++ D A ++ K+MV G P + YNIL+ G+C N
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 421 LPSMDVLELAETAYSEMLEV---GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGF 477
L V E + + GV N V + C G E+A+ + R+M G
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 478 IPDIGTYS 485
+PD GTY+
Sbjct: 127 LPDSGTYN 134
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 291 IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQ 350
+ + V +T+ YT +I GL +A + A + M ++ P+++TY ILL G + +
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 351 L------GRCKRILSL---MIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGC 401
L G+ + L + ++G P+ + +++ +C+ AY L +KM + G
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 402 QPGYVVYNILI 412
P YN LI
Sbjct: 127 LPDSGTYNTLI 137
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G46100.1); Has
11639 Blast hits to 3936 proteins in 180 species: Archae
- 0; Bacteria - 2; Metazoa - 206; Fungi - 141; Plants -
11004; Viruses - 0; Other Eukaryotes - 286 (source: NCBI
BLink). | chr4:573098-577243 REVERSE
Length = 1110
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 13/180 (7%)
Query: 302 LYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTY-RILLCGCLRKKQLGRCKRILSL 360
++T +I EA L E+ + +M + P RIL + L + +
Sbjct: 121 IFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKS 180
Query: 361 MIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNED 420
+ G P+ +N L+ A+C + D S AY+L KM++ P Y ILI G C
Sbjct: 181 SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 421 L-PSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIP 479
+ +M++L+ +ML G V ++ + LC G F++ + EM+SKGF P
Sbjct: 241 VNGAMELLD-------DMLNKGFVPDRTLIGG----LCDQGMFDEGKKYLEEMISKGFSP 289
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 128/324 (39%), Gaps = 43/324 (13%)
Query: 126 SESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQF 185
S + V +++ +P L + F +A +Q + H+++ + L +I + +
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSH---LILILKLGRGRYFNLIDDV 106
Query: 186 LREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLR 245
L + + + G++ LI+ Y + L L ++ +F + N ++ V +
Sbjct: 107 LAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV- 165
Query: 246 AEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTK 305
S+ GY +F L K+ + + P+T Y
Sbjct: 166 --------------SHRGYLQKAF-------ELFKSSRLHGVM---------PNTRSYNL 195
Query: 306 MISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEG 365
++ C A +M +P+V +Y+IL+ G RK Q+ +L M+ +G
Sbjct: 196 LMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG 255
Query: 366 CFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSM- 424
P +L+ C + K L++M+ G P + V N L+ G C +
Sbjct: 256 FVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEAC 311
Query: 425 DVLEL----AETAYSEMLEVGVVL 444
DV+E+ ET +S+ E+ + L
Sbjct: 312 DVVEVVMKNGETLHSDTWEMVIPL 335
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 368 PSPGIFNSLVHAYCRSRDY-SYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDV 426
P P N ++ R Y A++L K G P YN+L+ C N+DL
Sbjct: 152 PQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDL----- 206
Query: 427 LELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
+A + +MLE VV + + + C G+ A ++ +M++KGF+PD
Sbjct: 207 -SIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD 259
>AT1G80880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:30395194-30396921 REVERSE
Length = 540
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 21/234 (8%)
Query: 252 AYLVHREMSN--LGYSMDSFT--LGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYT 304
A + REM N + + DS++ + CF+ K G D+L L ++K P +Y
Sbjct: 278 AKRIWREMGNYCITPNKDSYSHMISCFS----KVGNLFDSLRLYDEMKKRGLAPGIEVYN 333
Query: 305 KMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIME 364
++ L F+EAM + ++ P+ VTY ++ +L + +L+ MI E
Sbjct: 334 SLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISE 393
Query: 365 GCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSM 424
P+ F HA+ + ++ ++L +M P + +++G + + P
Sbjct: 394 NLSPTVDTF----HAFLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQ-P-- 446
Query: 425 DVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFI 478
E A ++EM +V N + L G EKA + EM SKGF+
Sbjct: 447 ---ENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFV 497
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 290 LIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIP-NVVTYRILLCG-CLR 347
+++K + P + ++ LC E+A +F+ + + P +V + ++L G C
Sbjct: 214 IMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVILNGWCNI 271
Query: 348 KKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVV 407
+ KRI M P+ ++ ++ + + + + +L +M K G PG V
Sbjct: 272 WTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEV 331
Query: 408 YNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFN 467
YN L+ L D + A ++ E G+ + V ++ R LC GK + A N
Sbjct: 332 YNSLVYV------LTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARN 385
Query: 468 VIREMMSKGFIPDIGTY 484
V+ M+S+ P + T+
Sbjct: 386 VLATMISENLSPTVDTF 402
>AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744) |
chr5:15884236-15886368 REVERSE
Length = 710
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 115/279 (41%), Gaps = 12/279 (4%)
Query: 208 YCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMD 267
Y + G + L+ L + + + + LTY + + +F L+ A VH M G++ +
Sbjct: 212 YLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAE 271
Query: 268 SFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMR 327
G + K GK A + + + + L T ++ + FEEA++ ++M
Sbjct: 272 VEACGALINMYGKCGKVLYAQRVFD-DTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMD 330
Query: 328 ANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYS 387
PN T+ ILL L + + L++ G + N+LV+ Y +S
Sbjct: 331 TKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIE 390
Query: 388 YAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKV 447
A K M V +N +I G C + L + LE A+ M+ G + N++
Sbjct: 391 DARKAFSGMT----FRDIVTWNTMISG-CSHHGL-GREALE----AFDRMIFTGEIPNRI 440
Query: 448 NVSNFARCLCGVGKFEKAFNVIREMMSKGFI-PDIGTYS 485
+ +G E+ + ++M K + PDI Y+
Sbjct: 441 TFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYT 479
>AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11336479-11339052 FORWARD
Length = 857
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 110/262 (41%), Gaps = 14/262 (5%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N +I + +NGL N AL ++ FG T+ LV + + + +S+
Sbjct: 107 NSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSS 166
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMD 321
LG + F + + GK D + + D +++ M++G + + +
Sbjct: 167 LGMDCNEFVASSLIKAYLEYGKI-DVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIK 225
Query: 322 FLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYC 381
+ MR + PN VT+ +L C K + ++ L+++ G I NSL+ Y
Sbjct: 226 GFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYS 285
Query: 382 RSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVG 441
+ + A KL + M + V +N +I G + ++E + T + EM+ G
Sbjct: 286 KCGRFDDASKLFRMMSRADT----VTWNCMISGYVQS------GLMEESLTFFYEMISSG 335
Query: 442 VVLNKVNVSNFARCLCGVGKFE 463
V+ + + F+ L V KFE
Sbjct: 336 VLPDAI---TFSSLLPSVSKFE 354
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 93/219 (42%), Gaps = 5/219 (2%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ NV++ Y + G ++ ++ ++ + +T++ ++ V +D +H +
Sbjct: 206 IWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLV 265
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEA 319
G + K G++ DA L DT+ + MISG ++ L EE+
Sbjct: 266 VVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRA-DTVTWNCMISGYVQSGLMEES 324
Query: 320 MDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHA 379
+ F M ++ +P+ +T+ LL + + L CK+I ++ + ++L+ A
Sbjct: 325 LTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDA 384
Query: 380 YCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
Y + R S A + +C VV+ +I G N
Sbjct: 385 YFKCRGVSMAQNIFS---QCN-SVDVVVFTAMISGYLHN 419
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE
Length = 838
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%)
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
A+ LN M+ P+V+ Y L+ G + +L + K + M ++G P+ +NS++
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 379 AYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIG 413
C + ++ A LLK+M GC P +VVY+ L+G
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVG 802
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 216 AALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFA 275
AAL L +K+ G S L Y L+ ++ + +LD A + REM+ G + FT
Sbjct: 707 AALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 766
Query: 276 HSLCKAGKWRDALTLIEKEEFV---PDTILYTKMISGLCEASLFEEAMDFLNRM 326
LC AG++R+A L+++ E P+ ++Y+ ++ L +A EA + M
Sbjct: 767 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
>AT5G27270.1 | Symbols: EMB976 | EMB976 (EMBRYO DEFECTIVE 976) |
chr5:9605650-9609625 FORWARD
Length = 1038
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 6/188 (3%)
Query: 238 ALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA----LTLIEK 293
+++ ++R L+ AY + E + G + T+ ++L GK R+A T +EK
Sbjct: 709 SMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEK 768
Query: 294 EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGR 353
DT+ Y +I + EA + A + RM + ++ TY ++ R QL +
Sbjct: 769 N-IELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDK 827
Query: 354 CKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIG 413
I S G + I+ +++ Y + S A L +M K G +PG YN+++
Sbjct: 828 AIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV- 886
Query: 414 GICGNEDL 421
IC L
Sbjct: 887 KICATSRL 894
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 102/257 (39%), Gaps = 5/257 (1%)
Query: 169 MIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFG 228
++ + N R E R +++ E+ N LI+ + G A E R+ G
Sbjct: 745 LVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSG 804
Query: 229 YKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDAL 288
S TYN ++ V+ R +LD A + G +D K GK +AL
Sbjct: 805 VPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEAL 864
Query: 289 TL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGC 345
+L ++K+ P T Y M+ + L E + L M N ++ TY L+
Sbjct: 865 SLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVY 924
Query: 346 LRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGY 405
Q ++ ++L+ +G S F+SL+ A ++ A + KM + G P
Sbjct: 925 AESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDS 984
Query: 406 VVYNILIGG--ICGNED 420
++ G CG+ +
Sbjct: 985 ACKRTILKGYMTCGDAE 1001
>AT5G15280.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4962293-4965976 FORWARD
Length = 1227
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 250 DTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKM 306
+ AY+ E+ +LG+ D T G C G + A L+ I + + PD Y +
Sbjct: 340 ERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAI 399
Query: 307 ISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGC 366
+SGL L++ L+ M+ N + ++ T++I++ G + +Q KRI++ M G
Sbjct: 400 LSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGL 459
Query: 367 FPSPGIFNSLVHAY 380
+ + + L A+
Sbjct: 460 IEASKVEDPLSEAF 473
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%)
Query: 303 YTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMI 362
Y +I L + + A+ LN M N IP +Y ++ G LR QL + + M+
Sbjct: 1051 YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMV 1110
Query: 363 MEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILI 412
G PS ++ LVH +C + + +L+K MV G P ++ +I
Sbjct: 1111 ELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVI 1160
>AT5G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4445461-4447290 FORWARD
Length = 609
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 147/358 (41%), Gaps = 25/358 (6%)
Query: 144 IKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVL----GK 199
I+ F + +G + Y ++E E N ++ E F +E K + L G
Sbjct: 193 IQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGEN--HKVVELF-QEFKSQRLSFLAKESGS 249
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
+ ++ ++G ALE L +KD G S Y+ L+ F A ++ + +E
Sbjct: 250 IYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEA 309
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLI----EKEEFVPDTILYTKMISGLCEASL 315
D + G L ++ + E V D IL +++G +
Sbjct: 310 GGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCIL-CAIVNGFSKQRG 368
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
F EA+ C VTY I + R ++ + + + M+ +G +++
Sbjct: 369 FAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSN 428
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYS 435
++ Y ++R S A +L+ KM + GC+P +YN LI + G +MD L AE +
Sbjct: 429 IMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLI-DMHGR----AMD-LRRAEKIWK 482
Query: 436 EMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREM-MSKGFIPD------IGTYSK 486
EM V+ +KV+ ++ + E+ + +E M++G I +G +SK
Sbjct: 483 EMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSK 540
>AT3G13160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4229994-4231178 REVERSE
Length = 394
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 115/269 (42%), Gaps = 40/269 (14%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM-SNL 262
+I Y + G++ A + + + K + L++NAL+ + ++K D + +E+ L
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 263 GYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE---FVPDTI------------------ 301
D + LC G + +A+ LI++ E PD I
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 302 --LYTKMIS---------------GLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCG 344
++ +M+ GL + EE + ++++ N P+V T+ ++ G
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 345 CLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKM-VKCGCQP 403
+ + +L + GC P +FNSL+ A C++ D AY+L K++ K
Sbjct: 292 FVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVD 351
Query: 404 GYVVYNILIGGICGNEDLPSMDVLELAET 432
V+ ++ + G++ + +++ELA+T
Sbjct: 352 EAVLQEVVDALVKGSKQDEAEEIVELAKT 380
>AT5G02830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:644458-648421 REVERSE
Length = 852
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 104/285 (36%), Gaps = 62/285 (21%)
Query: 255 VHREMSNLGYSMDSFTLGCFAHSLCKAGK-------WRDALTLIEKEEFVPDTILYTKMI 307
V++ M L + D + + C AG+ +++A + D Y +I
Sbjct: 322 VYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTII 381
Query: 308 SGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCF 367
+A +++ A+ + M++ PN T+ L+ C + + + M+ GC
Sbjct: 382 KVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCE 441
Query: 368 PSPGIFNSLVHAYCRSRDYSYAYKLLKK--------------MVKCG------------- 400
P+ FN L+HA + Y A++L + +V G
Sbjct: 442 PNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGP 501
Query: 401 -------------------C-QPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEV 440
C +P YNIL+ CG + ++++ EM +
Sbjct: 502 GSLVNRNSNSPYIQASKRFCFKPTTATYNILLKA-CGTDYYRGKELMD-------EMKSL 553
Query: 441 GVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
G+ N++ S G G E A ++R M S G PD+ Y+
Sbjct: 554 GLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYT 598
>AT2G27800.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G27300.1); Has 11283 Blast hits to 3897
proteins in 129 species: Archae - 1; Bacteria - 2;
Metazoa - 118; Fungi - 74; Plants - 10832; Viruses - 0;
Other Eukaryotes - 256 (source: NCBI BLink). |
chr2:11849789-11851351 REVERSE
Length = 442
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 123/305 (40%), Gaps = 28/305 (9%)
Query: 112 SKTQKFLRQFREKLSESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYN-ALLEMI 170
SK + + + + + +A+ + L ++P L F WA +Q ++H Y+ A+ ++
Sbjct: 124 SKFHETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLG 183
Query: 171 ESTNNNSNDRIPEQFL--REIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRL---K 225
+ D I Q L R I +E+ L N +I + + G A+ + K
Sbjct: 184 AAKMYQEMDDIVNQVLSVRHIGNEN------LYNSIIFYFTKAGKLIRAVNIFRHMVTSK 237
Query: 226 DFGYKASRLTYNALVIVFLRAEKLDTAYLVH----------REMSNLGYSMDSFTLGCFA 275
+ + + TY+ L L + + +Y+ H R+M + G D F L C
Sbjct: 238 NLECRPTIRTYHILFKALL--GRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLV 295
Query: 276 HSLCKAGKWRDALTLIEKEEFV----PDTILYTKMISGLCEASLFEEAMDFLNRMRANSC 331
+ DAL + + V P++ Y +I GLC A + L+ M+
Sbjct: 296 KGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGF 355
Query: 332 IPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYK 391
+PN +Y L+ ++ + L MI G + +LV CR Y A +
Sbjct: 356 VPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATR 415
Query: 392 LLKKM 396
LL+ +
Sbjct: 416 LLEML 420
>AT2G34400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:14516238-14518186 FORWARD
Length = 617
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 122/317 (38%), Gaps = 59/317 (18%)
Query: 201 LNVLIRKYCQNGLWN---AALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHR 257
N +IR WN AAL R+K G K + TYN + I + E++ VH
Sbjct: 95 FNYMIRGLTNT--WNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHS 152
Query: 258 EMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFE 317
+ +G D K G+ A L + E DT+ + MISG EA +
Sbjct: 153 SLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFD-EITERDTVSWNSMISGYSEAGYAK 211
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGC-----LRKKQL--------------------- 351
+AMD +M P+ T +L C LR +L
Sbjct: 212 DAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLI 271
Query: 352 ---GRC------KRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQ 402
G+C +R+ + MI + + +++ Y ++ S A+KL +M K G
Sbjct: 272 SMYGKCGDLDSARRVFNQMIKKDRVA----WTAMITVYSQNGKSSEAFKLFFEMEKTGVS 327
Query: 403 PGYVVYNILIGGICGNEDLPSMDVLELA---ETAYSEM-LEVGVVLNKVNVSNFARCLCG 458
P + ++ CG S+ LEL ET SE+ L+ + + V + +C
Sbjct: 328 PDAGTLSTVLSA-CG-----SVGALELGKQIETHASELSLQHNIYVATGLVDMYGKC--- 378
Query: 459 VGKFEKAFNVIREMMSK 475
G+ E+A V M K
Sbjct: 379 -GRVEEALRVFEAMPVK 394
>AT1G10910.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: PTAC2 (PLASTID
TRANSCRIPTIONALLY ACTIVE2) (TAIR:AT1G74850.1); Has 17570
Blast hits to 5782 proteins in 175 species: Archae - 1;
Bacteria - 18; Metazoa - 305; Fungi - 261; Plants -
16266; Viruses - 0; Other Eukaryotes - 719 (source: NCBI
BLink). | chr1:3639908-3643974 FORWARD
Length = 664
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
++ L++ Y + GL++ + E L L+ GY + + Y L+ +A KL+ A + +M
Sbjct: 309 MMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDM 368
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVP---DTILYTKMISGLCEASLF 316
G D + +LC++ ++++A L E D ++ M+ C A
Sbjct: 369 KGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEM 428
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKK 349
E M + +M + P+ T+ IL+ +++K
Sbjct: 429 ESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEK 461
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 98/240 (40%), Gaps = 6/240 (2%)
Query: 155 GYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLW 214
G +Y +L + S N E F++++K E + L+ Y G +
Sbjct: 232 GIQMDSVMYGTVLAICAS---NGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDY 288
Query: 215 NAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCF 274
A E + +K G +++ L+ V+++ D + + E+ + GY+ +
Sbjct: 289 KKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCML 348
Query: 275 AHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSC 331
L KAGK +A ++ ++ + D + MIS LC + F+EA +
Sbjct: 349 MDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYE 408
Query: 332 IPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYK 391
++V +LC R ++ R++ M + P F+ L+ + + + + AY+
Sbjct: 409 KCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQ 468
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 124/310 (40%), Gaps = 47/310 (15%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
LNV++R + +G W ++ ++ G K S TY++ I F+ A+ + A +++ +
Sbjct: 101 LNVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSS-CIKFVGAKNVSKALEIYQSIP 158
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISG-------- 309
+ ++ + L K GK + L ++++ PD + Y +++G
Sbjct: 159 DESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGY 218
Query: 310 ---------------------------LCEAS-LFEEAMDFLNRMRANSCIPNVVTYRIL 341
+C ++ EEA +F+ +M+ PN+ Y L
Sbjct: 219 PKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSL 278
Query: 342 LCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGC 401
L K + +++ M G P+ + +L+ Y + + + +LL ++ G
Sbjct: 279 LNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGY 338
Query: 402 QPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGK 461
+ Y +L+ G L LE A + + +M GV + S LC +
Sbjct: 339 AENEMPYCMLMDG------LSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKR 392
Query: 462 FEKAFNVIRE 471
F++A + R+
Sbjct: 393 FKEAKELSRD 402
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/306 (18%), Positives = 124/306 (40%), Gaps = 12/306 (3%)
Query: 184 QFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVF 243
+ + I DE ++ + N ++ +NG ++ ++ ++K G K +TYN L+
Sbjct: 152 EIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGC 211
Query: 244 LRAEK-LDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPD 299
++ + A + E+ + G MDS G G+ +A I++ E P+
Sbjct: 212 IKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPN 271
Query: 300 TILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILS 359
Y+ +++ +++A + + M++ +PN V LL ++ R + +LS
Sbjct: 272 IYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLS 331
Query: 360 LMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNE 419
+ G + + L+ ++ A + M G + +I+I +C ++
Sbjct: 332 ELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSK 391
Query: 420 DLPSMDVLEL-AETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFI 478
L +ET Y + + V ++ C G+ E ++++M +
Sbjct: 392 RFKEAKELSRDSETTYEK-------CDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVS 444
Query: 479 PDIGTY 484
PD T+
Sbjct: 445 PDYNTF 450
>AT2G28050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:11938265-11939653 REVERSE
Length = 462
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 124/296 (41%), Gaps = 19/296 (6%)
Query: 193 DKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTA 252
+K+V+G+ N +I Y NG ++ +E +K+ K T ++ R ++++ A
Sbjct: 134 EKKVVGRFFNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELA 193
Query: 253 YLVHREMSNLGYSMDS-FTLGCFAHSLCKAGKWRDALTLIEKEEFV----PDTILYTKMI 307
M G + + ++L LC G+ A L+E+ V + + + MI
Sbjct: 194 RDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI 253
Query: 308 SGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCF 367
+ FEE L M S + ++ +Y++L+ G ++ +R++ +M +
Sbjct: 254 GCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLR 313
Query: 368 PSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN----EDLPS 423
++N +++ Y R +L +M G P Y +L+ G+C E +
Sbjct: 314 VESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSF 373
Query: 424 MDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIP 479
++ L + E E + S + VG +K+ V+ EM+ GFIP
Sbjct: 374 LNELRVNEFEIDEEM----------YSTLSEECYRVGMIDKSLEVVAEMIRDGFIP 419
>AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5387444-5389690 FORWARD
Length = 687
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 18/184 (9%)
Query: 299 DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRIL 358
D + MISG +EE+++ L M N P VT ++L C + K CKR+
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVH 259
Query: 359 SLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGIC-- 416
+ PS + N+LV+AY + A ++ + M + + ++ G
Sbjct: 260 EYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK----ARDVISWTSIVKGYVER 315
Query: 417 GNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKG 476
GN L+LA T + +M + + + + R C F ++ + REM S G
Sbjct: 316 GN--------LKLARTYFDQMPVRDRISWTIMIDGYLRAGC----FNESLEIFREMQSAG 363
Query: 477 FIPD 480
IPD
Sbjct: 364 MIPD 367
>AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:12712884-12715100 FORWARD
Length = 738
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 113/293 (38%), Gaps = 27/293 (9%)
Query: 202 NVLIRKYCQNGLWNAAL---EELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHRE 258
N LI Y QNG N AL EL K+ K +++T + + + L+ +H
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNM--KLNQITLVSTLSACAQVGALELGRWIHSY 390
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAG---KWRDALTLIEKEEFVPDTILYTKMISGLCEASL 315
+ G M+ H K G K R+ +EK D +++ MI GL
Sbjct: 391 IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKR----DVFVWSAMIGGLAMHGC 446
Query: 316 FEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIME-GCFPSPGIFN 374
EA+D +M+ + PN VT+ + C C + + + M G P +
Sbjct: 447 GNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYA 506
Query: 375 SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG--ICGNEDLPSMDVLELAET 432
+V RS A K ++ M P V+ L+G I N L LAE
Sbjct: 507 CIVDVLGRSGYLEKAVKFIEAM---PIPPSTSVWGALLGACKIHAN--------LNLAEM 555
Query: 433 AYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
A + +LE+ + +V + +GK+E + + M G + G S
Sbjct: 556 ACTRLLELEPRNDGAHVL-LSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSS 607
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 93/225 (41%), Gaps = 9/225 (4%)
Query: 193 DKEVLGKLL--NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLD 250
D+ V G + N +I + QN + ALE R+K G+ A + T +++ L+
Sbjct: 218 DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLE 277
Query: 251 TAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGL 310
H + + Y D CK G DAL + + + D I ++ MISGL
Sbjct: 278 LGMQAHVHI--VKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGL 334
Query: 311 CEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQL-GRCKRILSLMIMEGCFPS 369
+ +EA+ RM+++ PN +T +L C L S+ + G P
Sbjct: 335 AQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPV 394
Query: 370 PGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG 414
+ ++ ++ A KLL +M C+P V + L+G
Sbjct: 395 REHYGCMIDLLGKAGKLDDAVKLLNEM---ECEPDAVTWRTLLGA 436
>AT2G03380.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1028292-1030361 FORWARD
Length = 689
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 16/220 (7%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
+I Y +N L L R+++ + TY L++ + L H + G
Sbjct: 213 MIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSG 272
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFL 323
+ S + K G +A + + V D +++T MI G EA+
Sbjct: 273 IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHV-DLVMWTAMIVGYTHNGSVNEALSLF 331
Query: 324 NRMRANSCIPNVVTYRILLCGC--LRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYC 381
+M+ PN VT +L GC + +LGR LS+ + G + + + N+LVH Y
Sbjct: 332 QKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKV--GIWDT-NVANALVHMYA 388
Query: 382 R---SRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
+ +RD Y +++ + V +N +I G N
Sbjct: 389 KCYQNRDAKYVFEMES-------EKDIVAWNSIISGFSQN 421
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 2/209 (0%)
Query: 187 REIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRA 246
R + D+ E L V++R YC N ++ L G++ + ++ +
Sbjct: 96 RLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTEL 155
Query: 247 EKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKM 306
+ LD +H ++ + S D+ L K G+ + A + + + + + +T M
Sbjct: 156 QDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVF-NDITLRNVVCWTSM 213
Query: 307 ISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGC 366
I+G + L EE + NRMR N+ + N TY L+ C + L + K ++ G
Sbjct: 214 IAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI 273
Query: 367 FPSPGIFNSLVHAYCRSRDYSYAYKLLKK 395
S + SL+ Y + D S A ++ +
Sbjct: 274 ELSSCLVTSLLDMYVKCGDISNARRVFNE 302
>AT3G23020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8177215-8179743 REVERSE
Length = 842
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 110/277 (39%), Gaps = 33/277 (11%)
Query: 214 WNAALEELGRLKDFG-YKASRLTYNALVIVFLRAEKLDTAYLVHREM---------SNLG 263
W A+E K G Y+ + + YN ++ + +A K + EM S G
Sbjct: 167 WERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYG 226
Query: 264 YSMDSFTLGCF-AHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDF 322
+D ++ G H+LC GK + K PD + ++ +A F++A +F
Sbjct: 227 TLIDVYSKGGLKVHALCWLGK-------MSKIGMQPDEVTTGIVLQMYKKAREFQKAEEF 279
Query: 323 L-------NRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNS 375
N+ ++ C+ + TY ++ + Q+ M+ EG P+ FN+
Sbjct: 280 FKKWSCDENKADSHVCLSSY-TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNT 338
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYS 435
++H Y + L+K M K C P YNILI N D +E A +
Sbjct: 339 MIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNND------IERAGAYFK 391
Query: 436 EMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREM 472
EM + G+ + V+ E+A +I EM
Sbjct: 392 EMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEM 428
>AT3G61360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:22704630-22706126 REVERSE
Length = 498
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 105/270 (38%), Gaps = 43/270 (15%)
Query: 247 EKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK--EEFVPDTILYT 304
E L+ + +E+ + +D F + + C + ++A ++ EK F PD
Sbjct: 157 ETLEAFVKMEKEIFRKKFGVDEFNI--LLRAFCTEREMKEARSIFEKLHSRFNPDVKTMN 214
Query: 305 KMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKR-------- 356
++ G EA F + M PN VTY I + G +K+ G R
Sbjct: 215 ILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRL 274
Query: 357 -------ILSLMIM--------------------EGCFPSPGIFNSLVHAYCRSRDYSYA 389
IL+ +I G P G +N+L+ + + D S A
Sbjct: 275 DFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGA 334
Query: 390 YKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNV 449
K++K+M + G +P V ++ + G+ +++ V E Y +M E +V +
Sbjct: 335 IKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEY----YQKMKERSLVPKTPTI 390
Query: 450 SNFARCLCGVGKFEKAFNVIREMMSKGFIP 479
+ C G+ ++ + M+ KG+ P
Sbjct: 391 VMLMKLFCHNGEVNLGLDLWKYMLEKGYCP 420
>AT3G09040.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2761195-2764281 REVERSE
Length = 1028
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 11/222 (4%)
Query: 201 LNVLIRKYCQNGLWNAAL---EELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHR 257
+N LI Y QN L A + E L R G S +T+ +V + E L H
Sbjct: 598 MNALIAGYSQNNLEEAVVLFQEMLTR----GVNPSEITFATIVEACHKPESLTLGTQFHG 653
Query: 258 EMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTI-LYTKMISGLCEASLF 316
+++ G+S + LG + + + E P +I L+T M+SG + +
Sbjct: 654 QITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFY 713
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
EEA+ F MR + +P+ T+ +L C L + I SL+ N+L
Sbjct: 714 EEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTL 773
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
+ Y + D + ++ +M + + V +N LI G N
Sbjct: 774 IDMYAKCGDMKGSSQVFDEMRR---RSNVVSWNSLINGYAKN 812
>AT3G02490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:513607-515604 FORWARD
Length = 665
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 145/381 (38%), Gaps = 41/381 (10%)
Query: 110 FGSKTQKFLRQFREKLSESLVAEVL-NLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLE 168
+G+ +K LR + + +V VL L +P + FF W + H + YNA+
Sbjct: 230 WGADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKHDEKTYNAMAR 289
Query: 169 MIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALE--ELGRLKD 226
++ DR + + EI+ E+ + + ++CQ + A+E E
Sbjct: 290 VL--GKEKFLDRF-QHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELFEFAMAGS 346
Query: 227 FGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRD 286
+ + L+ + A+KLD MD FT A++
Sbjct: 347 ISNTPTPHCCSLLLKKIVTAKKLD---------------MDLFTRTLKAYT--------- 382
Query: 287 ALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCL 346
VPD +L ++ L F ++ + L M +P+ ++ G
Sbjct: 383 -----GNGNVVPDVML-QHVLKSLRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASGLS 436
Query: 347 RKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMV-KCGCQPGY 405
RK + +++ M G SLV +C ++D A + KKM+ K G
Sbjct: 437 RKGKKDEANELVNFMEASGNHLDDKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSYAG 496
Query: 406 VVYNILIGGICGNEDLPSMDVLEL-AETAYSEMLEVGVVLNKVNVSN-FARCLCGVGKFE 463
+ L+ C + + DV +L +E L+ K+ V N + + G FE
Sbjct: 497 YAFEKLVLAYCNS--FQARDVYKLFSELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFE 554
Query: 464 KAFNVIREMMSKGFIPDIGTY 484
+A +++ M + GF P + +
Sbjct: 555 EALSLLPMMRNHGFPPFVDPF 575
>AT5G03560.2 | Symbols: | nucleobase:cation symporter |
chr5:901452-902719 REVERSE
Length = 363
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 277 SLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIP 333
+L K G+ +AL L I+ + +PD + +T ++ A +E + RM A+ P
Sbjct: 206 ALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSP 265
Query: 334 NVVTYRILLCG-CLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKL 392
N TY +L+ G K K+ L M+ G P+ + ++ A+ R A +L
Sbjct: 266 NAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESAREL 325
Query: 393 LKKMVKCGCQP 403
L++M G P
Sbjct: 326 LQEMKGKGFVP 336
>AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 937
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 142/357 (39%), Gaps = 22/357 (6%)
Query: 126 SESLVAEVLNLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQF 185
S SLV L+K+ LG + I + G AV N+L+ M+ S N +
Sbjct: 162 SMSLVISSCGLLKDESLG-RQIIGQVVKSGLESKLAVENSLISMLGSMGN-------VDY 213
Query: 186 LREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLR 245
I D+ E N + Y QNG + ++ F + + T + L+ V
Sbjct: 214 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 273
Query: 246 AEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDA-LTLIEKEEFVPDTILYT 304
+ +H + +G+ DS C AG R L+ K+ D I +
Sbjct: 274 VDHQKWGRGIHGLVVKMGF--DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWN 331
Query: 305 KMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIME 364
+++ +A+ L M ++ N VT+ L C + + + L+++
Sbjct: 332 SLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS 391
Query: 365 GCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSM 424
G F + I N+LV Y + + S + ++L +M + V +N LIGG +ED P
Sbjct: 392 GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR----RDVVAWNALIGGYAEDED-P-- 444
Query: 425 DVLELAETAYSEMLEVGVVLNKVN-VSNFARCLCGVGKFEKAFNVIREMMSKGFIPD 480
+ A A+ M GV N + VS + CL E+ + ++S GF D
Sbjct: 445 ---DKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 498
>AT4G30825.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:15009605-15012319 FORWARD
Length = 904
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 87/190 (45%), Gaps = 7/190 (3%)
Query: 296 FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCK 355
F P+T+ + ++ +A LF++ + + + + +V++Y ++ + K
Sbjct: 695 FTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMS 753
Query: 356 RILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGI 415
+ M +G S +N+L+ AY + + +LK+M K P + YNI+I I
Sbjct: 754 SAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMI-NI 812
Query: 416 CGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREMMSK 475
G + + E+A+ E+ E G+ + + + + G E+A +++EM +
Sbjct: 813 YGEQGW----IDEVADVL-KELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGR 867
Query: 476 GFIPDIGTYS 485
IPD TY+
Sbjct: 868 NIIPDKVTYT 877
>AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4519647-4521533 FORWARD
Length = 628
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 7/213 (3%)
Query: 187 REIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRA 246
R++ DE E +I +Y Q G + AL + K + T+ ++ +RA
Sbjct: 107 RKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRA 166
Query: 247 EKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVP--DTILYT 304
L +H + Y F KAG+ ++A + E +P D + T
Sbjct: 167 SGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFE---CLPERDVVSCT 223
Query: 305 KMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIME 364
+I+G + L EEA++ +R+ + PN VTY LL L K+ ++
Sbjct: 224 AIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQA-HCHVLR 282
Query: 365 GCFPSPGIF-NSLVHAYCRSRDYSYAYKLLKKM 396
P + NSL+ Y + + SYA +L M
Sbjct: 283 RELPFYAVLQNSLIDMYSKCGNLSYARRLFDNM 315
>AT1G30610.1 | Symbols: emb2279 | emb2279 (embryo defective 2279) |
chr1:10846676-10850517 FORWARD
Length = 1006
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 77/187 (41%), Gaps = 22/187 (11%)
Query: 298 PDTILYTKMISGLCEASLFEEAMDFLNRMRAN---------------SCIPNVVTYRILL 342
PD + Y + L +A +E ++ MR+ P+VV Y +L
Sbjct: 541 PDMVAYRSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVL 600
Query: 343 CGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQ 402
C+++KQ +L + G PSP + ++ Y+ ++ +KM K
Sbjct: 601 NACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSI- 659
Query: 403 PGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKF 462
P + Y +L+ + ++ S + + E +M G+V + + ARCLC G+
Sbjct: 660 PNALAYRVLVNTLW--KEGKSDEAVHTVE----DMESRGIVGSAALYYDLARCLCSAGRC 713
Query: 463 EKAFNVI 469
+ N++
Sbjct: 714 NEGLNMV 720
>AT4G16390.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885), Smr protein/MutS2 C-terminal
(InterPro:IPR002625); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G46580.1); Has 19821 Blast hits to 5782
proteins in 183 species: Archae - 2; Bacteria - 24;
Metazoa - 276; Fungi - 350; Plants - 18437; Viruses - 0;
Other Eukaryotes - 732 (source: NCBI BLink). |
chr4:9257985-9260093 FORWARD
Length = 702
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
Query: 258 EMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEK---EEFVPDTILYTKMISGLCEAS 314
+MS+ G D+ T+ + +AG AL+L ++ E++ D + ++ +I +
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 315 LFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFN 374
++ ++ M+A PN+V Y L+ R K+ + K I +I G P+ +
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYA 354
Query: 375 SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
+LV AY R+R A + ++M + G ++YN L+ N
Sbjct: 355 ALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADN 398
>AT5G67570.1 | Symbols: DG1, EMB1408 | DG1 (DELAYED GREENING 1) |
chr5:26952352-26954847 FORWARD
Length = 611
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 5/188 (2%)
Query: 214 WNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGC 273
W A L+ G + + TY + V L + K D + R+M + G + + T
Sbjct: 357 WKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKV 416
Query: 274 FAHSLCKAGKWRDALTLI---EKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRM-RAN 329
+L + GK +A+ + E++ + +Y ++ LC + +AM + RM R
Sbjct: 417 LVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLE 476
Query: 330 SCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYA 389
+C P +T+ L+ L + C I M + C P+ G N ++ Y R+ +S A
Sbjct: 477 NCRPLEITFTGLIAASLNGGHVDDCMAIFQYM-KDKCDPNIGTANMMLKVYGRNDMFSEA 535
Query: 390 YKLLKKMV 397
+L +++V
Sbjct: 536 KELFEEIV 543
>AT3G29290.1 | Symbols: emb2076 | emb2076 (embryo defective 2076) |
chr3:11238421-11240125 FORWARD
Length = 540
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 8/218 (3%)
Query: 135 NLVKNPELGIKFFIWAG-RQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDED 193
+L K ++G+ F +++ + +G+ + +NALL + N + Q I+ E+
Sbjct: 328 SLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYED---VLQLFDMIRSEN 384
Query: 194 KEVLGKLLNVLIRKYCQN-GLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTA 252
L + L CQ G W A++ L ++ G S +YN ++ ++ K A
Sbjct: 385 LCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVA 444
Query: 253 YLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCE 312
LV+ M+ ++FT S W + +++K E PD LY I G+C
Sbjct: 445 LLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVE--PDVSLYNAAIHGMCL 502
Query: 313 ASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQ 350
F+ A + +MR P+ T R ++ L+K Q
Sbjct: 503 RREFKFAKELYVKMREMGLEPDGKT-RAMMLQNLKKHQ 539
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 9/206 (4%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKL-DTAYLVHREMS 260
N LI + G + LK G+K T+NAL+ +A + D L S
Sbjct: 323 NTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRS 382
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE---FVPDTILYTKMISGLCEASLFE 317
++ + S K G W A+ L+ + E T Y +IS ++ +
Sbjct: 383 ENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSK 442
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
A+ M C PN TY L+ C+ + IL + P ++N+ +
Sbjct: 443 VALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDIL-----KKVEPDVSLYNAAI 497
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQP 403
H C R++ +A +L KM + G +P
Sbjct: 498 HGMCLRREFKFAKELYVKMREMGLEP 523
>AT5G52850.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:21414935-21417616 REVERSE
Length = 893
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 2/198 (1%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
L ++ + +N A+ ++ G + + TY+A++ + LD +H +
Sbjct: 292 LWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQT 351
Query: 260 SNLGYSMDSFTLG-CFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
+G+ DS +G K + + P+ + +T +I GL + ++
Sbjct: 352 IKVGFE-DSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQD 410
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVH 378
L M PNVVT +L C + + + R I + ++ + NSLV
Sbjct: 411 CFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVD 470
Query: 379 AYCRSRDYSYAYKLLKKM 396
AY SR YA+ +++ M
Sbjct: 471 AYASSRKVDYAWNVIRSM 488
>AT2G36980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15531161-15533038 FORWARD
Length = 625
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 17/211 (8%)
Query: 277 SLCKAGKWRDALTLIEKEEFVP--DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPN 334
SL K+G+ A + + +P DT+ + M++ L +EA+ ++R + P+
Sbjct: 13 SLAKSGRIASARQVFDG---MPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPD 69
Query: 335 VVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLK 394
++ +L C + ++I SL+I G S + NSL+ Y + D A K+ +
Sbjct: 70 DYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFR 129
Query: 395 KMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFAR 454
M C + ++L + + ++DV + EM + + +S A
Sbjct: 130 DMC-CDSRNEVTWCSLLFAYMNAEQFEAALDV-------FVEMPKRVAFAWNIMISGHAH 181
Query: 455 CLCGVGKFEKAFNVIREMMSKGFIPDIGTYS 485
C GK E ++ +EM+ F PD T+S
Sbjct: 182 C----GKLESCLSLFKEMLESEFKPDCYTFS 208
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 19/222 (8%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
L N L+ Y + G A G +K+ +++N+L+ ++ +++ AY + +M
Sbjct: 312 LGNSLMSMYSKLGYMGEAKAVFGVMKN----KDSVSWNSLITGLVQRKQISEAYELFEKM 367
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALT-LIEKEEFVP--DTILYTKMISGLCEASLF 316
G M S+T + K + ++ +E +P D I +T MIS +
Sbjct: 368 P--GKDMVSWT------DMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYY 419
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
EEA+ + ++M PN T+ +L L +I ++ + NSL
Sbjct: 420 EEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSL 479
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
V YC+ + + AYK+ C +P V YN +I G N
Sbjct: 480 VSMYCKCGNTNDAYKIF----SCISEPNIVSYNTMISGYSYN 517
>AT4G04790.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G21880.1); Has 8701
Blast hits to 4047 proteins in 142 species: Archae - 4;
Bacteria - 18; Metazoa - 161; Fungi - 114; Plants -
8118; Viruses - 0; Other Eukaryotes - 286 (source: NCBI
BLink). | chr4:2435007-2439344 REVERSE
Length = 821
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 13/153 (8%)
Query: 321 DFLNRMRANSCI----PNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSL 376
D + R+ + C PN +R ++ C R K +L + P+ +FN +
Sbjct: 425 DLVRRIHSIMCTKSVKPNTENFRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPNSSMFNCI 484
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
+ Y R ++ S A ++K+M + G +P + + LI C ED + Y E
Sbjct: 485 LAGYFREKNVSSALMVVKQMKEAGVKPDSITFGYLINN-CTQEDAIT--------KYYEE 535
Query: 437 MLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVI 469
M + GV K + GKFEKA V+
Sbjct: 536 MKQAGVQATKRIYMSLIDAYAASGKFEKAKQVL 568
>AT2G18520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8034036-8035292 REVERSE
Length = 418
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 10/241 (4%)
Query: 183 EQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIV 242
E + K+ K L+ LIR Y + +++ A++ + G + +++NAL+
Sbjct: 87 EALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAA 146
Query: 243 FLRAEKLDTAYLVHREMSNL--GYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEF--VP 298
L ++ + + E + D + G S C +GK A+ ++ E V
Sbjct: 147 CLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVE 206
Query: 299 DTIL-YTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRI 357
TI+ +T ++ L + L +EA M C + Y + L K+ R K +
Sbjct: 207 VTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMNAA-KESPERVKEL 265
Query: 358 LSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICG 417
+ M G P +N L+ AYC S A KK+ + QP + LI +C
Sbjct: 266 MEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEA----KKVYEGLEQPNAATFRTLIFHLCI 321
Query: 418 N 418
N
Sbjct: 322 N 322
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD
Length = 761
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 109/274 (39%), Gaps = 25/274 (9%)
Query: 180 RIPEQFLREIKDEDKEVL---GKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTY 236
R+ EQ ++ E + G+L L+ Y +GL +A L D +
Sbjct: 318 RLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQ------SC 371
Query: 237 NALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEF 296
N ++ +L+ L+ A + + +L D + +AG A L +K
Sbjct: 372 NIIINRYLKNGDLERAETLFERVKSL---HDKVSWTSMIDGYLEAGDVSRAFGLFQKLH- 427
Query: 297 VPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKR 356
D + +T MISGL + LF EA L+ M P TY +LL L + K
Sbjct: 428 DKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKH 487
Query: 357 ILSLMI-MEGCF-PSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGG 414
I ++ C+ P + NSLV Y + AY++ KMV Q V +N +I G
Sbjct: 488 IHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMV----QKDTVSWNSMIMG 543
Query: 415 ICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVN 448
L + + A + EML+ G N V
Sbjct: 544 ------LSHHGLADKALNLFKEMLDSGKKPNSVT 571
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 117/299 (39%), Gaps = 22/299 (7%)
Query: 185 FLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFL 244
+++ D+D G V+I QN L+ A L + G K TY+ L+
Sbjct: 422 LFQKLHDKD----GVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAG 477
Query: 245 RAEKLDTAYLVHREMSNLG--YSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTIL 302
LD +H ++ Y D K G DA + K DT+
Sbjct: 478 ATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM-VQKDTVS 536
Query: 303 YTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMI 362
+ MI GL L ++A++ M + PN VT+ +L C + R + M
Sbjct: 537 WNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAM- 595
Query: 363 MEGCFPSPGI--FNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNED 420
E PGI + S++ R+ A + + + P + VY L+ G+CG +
Sbjct: 596 KETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALP---FTPDHTVYGALL-GLCG-LN 650
Query: 421 LPSMDVLELAETAYSEMLEVGVVLNKVNV-SNFARC--LCGVGKFEKAFNVIREMMSKG 476
D +AE A +LE L+ VN + A C G+G+ + + +EM KG
Sbjct: 651 WRDKDAEGIAERAAMRLLE----LDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKG 705
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 10/212 (4%)
Query: 230 KASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALT 289
K R+T +L+ +L VH + L D+F CK G A
Sbjct: 365 KPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAF- 423
Query: 290 LIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKK 349
++ K D L+T MI+GL ++A+ RM+ PN VT +L C
Sbjct: 424 MVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSG 483
Query: 350 QLGRCKRILSLMIMEGCF-PSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVY 408
+ + + M + F P + SLV CR+ A +++K K +P ++
Sbjct: 484 LVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQK--KMPMRPSQSMW 541
Query: 409 NILIGGICGNEDLPSMDVLELAETAYSEMLEV 440
++ G ED +E AE A +E+L++
Sbjct: 542 GSILSACRGGED------IETAELALTELLKL 567
>AT5G27110.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9538572-9540647 REVERSE
Length = 691
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 160/380 (42%), Gaps = 54/380 (14%)
Query: 135 NLVKNPELGIKFFIWAGRQIGYSHTQAVYNALLEMIESTNNNSNDRIPEQF-----LREI 189
++ +N ++ +IW GYS ++++ LE+ + N S +P+ F ++
Sbjct: 60 HVFENFDIRSDVYIWNSLMSGYS-KNSMFHDTLEVFKRLLNCSIC-VPDSFTFPNVIKAY 117
Query: 190 KDEDKEVLGKLLNVLIRK----------------YCQNGLWNAALEELGRLKDFGYKASR 233
+E LG++++ L+ K Y + L+ +L+ + +
Sbjct: 118 GALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVA--- 174
Query: 234 LTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIE- 292
++N ++ F ++ + + A + M + G+ +S +L A S C W + I
Sbjct: 175 -SWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLT-VAISACSRLLWLERGKEIHR 232
Query: 293 ---KEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKK 349
K+ F D + + ++ + E A + +M S +V + ++ G + K
Sbjct: 233 KCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKS----LVAWNSMIKGYVAKG 288
Query: 350 QLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYN 409
C IL+ MI+EG PS S++ A RSR+ L K + GYV+ +
Sbjct: 289 DSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNL-----LHGKFIH-----GYVIRS 338
Query: 410 ILIGGICGNEDLPSM----DVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKA 465
++ I N L + LAET +S+ + V +S++ VG + KA
Sbjct: 339 VVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYI----SVGNWFKA 394
Query: 466 FNVIREMMSKGFIPDIGTYS 485
V +M+S G PD+ T++
Sbjct: 395 VEVYDQMVSVGVKPDVVTFT 414
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 7/176 (3%)
Query: 222 GRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKA 281
G L FG + +T NAL+ ++++ + L A+ V EM Y D + +
Sbjct: 133 GHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEM----YERDVISWNSLLSGYARL 188
Query: 282 GKWRDALTLIEKEEFVPDTIL-YTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRI 340
G+ + A L + TI+ +T MISG + EAMDF M+ P+ ++
Sbjct: 189 GQMKKAKGLFHL--MLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLIS 246
Query: 341 LLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKM 396
+L C + L K I G G+ N+L+ Y + S A +L +M
Sbjct: 247 VLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQM 302
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 84/217 (38%), Gaps = 26/217 (11%)
Query: 291 IEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQ 350
+EKE PD I + + SG E+A+D + +M+ PNVV++ + GC +
Sbjct: 49 MEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGN 108
Query: 351 LGRCKRILSLMIMEGCFPSPGIFNSL---------------VHAYCRSRDYSYAYKLLKK 395
++ M EG P+ ++L VH +C ++ +
Sbjct: 109 FRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATA 168
Query: 396 MVKCGCQPGYVVYNILIGGICGNEDLPSMDVL----------ELAETAYSEMLEVGVVLN 445
+V + G + I I N+ L S + + E A+S MLE G+ +
Sbjct: 169 LVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPD 228
Query: 446 KVNVSNFARCLCGVGKFEKAFNVIREMMSK-GFIPDI 481
+ ++ G ++ + M S+ G IP I
Sbjct: 229 AITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTI 265
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 117/310 (37%), Gaps = 42/310 (13%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
L N LIR + QN A ++ FG A TY L+ L ++H +
Sbjct: 84 LCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHI 143
Query: 260 SNLGYSMDSFTLGCF--AHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFE 317
LG S D + +S C RDA+ L EK DT+ + M+ GL +A
Sbjct: 144 EKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSMLGGLVKAGELR 202
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLV 377
+A + M +++++ +L G R +++ + + M ++++V
Sbjct: 203 DARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPERNTVS----WSTMV 254
Query: 378 HAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLE--------- 428
Y ++ D A + KM V + I+I G L D L
Sbjct: 255 MGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLK 312
Query: 429 ---------LAETAYSEMLEVGV----VLNKVNVSNFARCLCGV-------GKFEKAFNV 468
LA S +L +G+ +L + N+ + A L + G +KAF+V
Sbjct: 313 FDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDV 372
Query: 469 IREMMSKGFI 478
++ K +
Sbjct: 373 FNDIPKKDLV 382
>AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17651912-17654032 FORWARD
Length = 706
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 130/330 (39%), Gaps = 19/330 (5%)
Query: 154 IGYSHTQAVYNALLEMIESTNNNSNDRIPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGL 213
+G + + +V N++++M + N + + Q +R ++++ + +I YCQ G
Sbjct: 339 LGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMR-----CRDIIS--WSTIIGGYCQAGF 391
Query: 214 WNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGC 273
+ ++ G K + +L+ V ++ VH G +S
Sbjct: 392 GEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSS 451
Query: 274 FAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIP 333
+ K G ++A ++I E D + T MI+G E +EA+D + P
Sbjct: 452 LINMYSKCGSIKEA-SMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRP 510
Query: 334 NVVTYRILLCGCLRKKQLGRCKRILSLMI-MEGCFPSPGIFNSLVHAYCRSRDYSYAYKL 392
+ VT+ +L C QL ++M P+ + +V CR+ S A K+
Sbjct: 511 DSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKM 570
Query: 393 LKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNF 452
+ +M + VV+ L+ D +E A +LE+ V+
Sbjct: 571 INEM---SWKKDDVVWTTLLIACKAKGD------IERGRRAAERILELDPTCATALVT-L 620
Query: 453 ARCLCGVGKFEKAFNVIREMMSKGFIPDIG 482
A G E+A NV + M +KG I + G
Sbjct: 621 ANIYSSTGNLEEAANVRKNMKAKGVIKEPG 650
>AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4222514-4224982 FORWARD
Length = 822
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 83/196 (42%), Gaps = 7/196 (3%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
++ Y +NG + +L+ L ++ G+ + T++ + + D A VH ++
Sbjct: 218 IVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTC 277
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTL---IEKEEFVPDTILYTKMISGLCEASLFEEAM 320
Y +D + G DA + + K + VP ++ MI+ C+ EA+
Sbjct: 278 YVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVP----WSFMIARFCQNGFCNEAV 333
Query: 321 DFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAY 380
D RMR +PN T +L GC K G +++ L++ G + N+L+ Y
Sbjct: 334 DLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVY 393
Query: 381 CRSRDYSYAYKLLKKM 396
+ A KL ++
Sbjct: 394 AKCEKMDTAVKLFAEL 409
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 99/240 (41%), Gaps = 14/240 (5%)
Query: 223 RLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAG 282
RL G++ + + + + +F+ +K + +H + LGY ++F ++ G
Sbjct: 136 RLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCG 195
Query: 283 KWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILL 342
A T+ E D +++ ++S E FE+++ L+ MR +PN T+ L
Sbjct: 196 SVDSARTVFEGI-LCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTAL 254
Query: 343 CGCLRKKQLGRCKRILSLMIMEGCFP-SPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGC 401
+ K + I++ C+ P + L+ Y + D S A+K+ +M K
Sbjct: 255 KASIGLGAFDFAKGVHG-QILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDV 313
Query: 402 QPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGK 461
P ++ +I C N A + M E VV N+ +S+ C +GK
Sbjct: 314 VP----WSFMIARFCQN------GFCNEAVDLFIRMREAFVVPNEFTLSSILNG-CAIGK 362
>AT2G40240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16811051-16812106 FORWARD
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
++LI + C+ G + AL +G + + + TY+ ++ R K++ A+ V M +
Sbjct: 111 DILISRLCKLGRIDDALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAWRVVESMRS 170
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDA---LTLIEKEEFVPDTILYTKMISGLCEASLFEE 318
SMD F S C G+ A + IE++ PD+ Y ++ G C A E
Sbjct: 171 KSVSMDVTAYNYFLTSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGKVEA 230
Query: 319 AMDFLNRMRANSCIPNVVTYRILLCGCL 346
AM L RM + T+ ++ G +
Sbjct: 231 AMAILRRMEEDGVTVLYSTHAHVITGLV 258
>AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8020757-8024534 REVERSE
Length = 978
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 4/207 (1%)
Query: 192 EDKEVLGK--LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKL 249
E+ E G + N LIR Y +GL N A+ R+ + G + T+ + ++
Sbjct: 91 ENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAK 150
Query: 250 DTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISG 309
+H + +GY+ D F H + G+ A + + E + + +T MI G
Sbjct: 151 GNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFD-EMSERNVVSWTSMICG 209
Query: 310 LCEASLFEEAMDFLNRM-RANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFP 368
++A+D RM R PN VT ++ C + + L +++ + + G
Sbjct: 210 YARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEV 269
Query: 369 SPGIFNSLVHAYCRSRDYSYAYKLLKK 395
+ + ++LV Y + A +L +
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDE 296
>AT1G25360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8894428-8896800 FORWARD
Length = 790
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 123/313 (39%), Gaps = 45/313 (14%)
Query: 181 IPEQFLREIKDEDKEVLGKLLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALV 240
+ E+ L + D K V N +I Y G + ALE + R+ G + TY +++
Sbjct: 237 LGEELLEGMDDNMKLVA---YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVI 293
Query: 241 IV-----FLRAEKLDTAYLVHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEE 295
L+ K AY++ RE + + D+ + + K GK+ +A + EK
Sbjct: 294 RACATAGLLQLGKQVHAYVLRRE--DFSFHFDNSLVSLYY----KCGKFDEARAIFEKMP 347
Query: 296 FVPDTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCK 355
D + + ++SG + EA M+ N++++ I++ G
Sbjct: 348 -AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK----NILSWMIMISGLAENGFGEEGL 402
Query: 356 RILSLMIMEGCFPSPGIFN------SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYN 409
++ S M EG P F+ +++ AYC + Y +++K G N
Sbjct: 403 KLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYH------AQLLKIGFDSSLSAGN 456
Query: 410 ILIG--GICGNEDLPSMDVLELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFN 467
LI CG V+E A + M L+ V+ + L G +A +
Sbjct: 457 ALITMYAKCG--------VVEEARQVFRTM----PCLDSVSWNALIAALGQHGHGAEAVD 504
Query: 468 VIREMMSKGFIPD 480
V EM+ KG PD
Sbjct: 505 VYEEMLKKGIRPD 517
>AT3G06430.1 | Symbols: EMB2750 | EMB2750 (embryo defective 2750) |
chr3:1956658-1958240 REVERSE
Length = 486
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 104/278 (37%), Gaps = 14/278 (5%)
Query: 214 WNAALEELGRLKDFG-YKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLGYSMDSFTLG 272
W ALE L++ Y+ TY L+++ ++ + + A + EM G
Sbjct: 104 WLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYT 163
Query: 273 CFAHSLCKAGKWRDALTLIEK----EEFVPDTILYTKMISGLCEASLFEEAMDFLNRMRA 328
+ ++ DA ++++K + PD Y+ ++ +AS F+ M
Sbjct: 164 ALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDE 223
Query: 329 NSCIPNVVTYRILLCGCLRKKQLGRCKRILS-LMIMEGCFPSPGIFNSLVHAYCRSRDYS 387
PN VT I+L G R + + +++LS +++ C P N ++ +
Sbjct: 224 RLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKID 283
Query: 388 YAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSM-DVLELAETAYSEMLEVGVVLNK 446
+K G +P +NILIG M V+E Y LE +
Sbjct: 284 MMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVME-----YMRKLEFPWTTST 338
Query: 447 VNVSNFARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
N N VG + +M S+G D T+
Sbjct: 339 YN--NIIEAFADVGDAKNMELTFDQMRSEGMKADTKTF 374
>AT1G26500.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9158380-9159897 FORWARD
Length = 505
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 11/232 (4%)
Query: 201 LNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMS 260
+N + C+ L A +LK+F K +TY ++ F L A + M
Sbjct: 184 MNRGVETLCKEKLVEEAKFVFIKLKEF-IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMM 242
Query: 261 NLGYSMDSFTLGCFAHSLCKAGKWRDA----LTLIEKEEFVPDTILYTKMISGLCEASLF 316
+ G+ +D +L K ++ +A ++ K D Y MI LC+
Sbjct: 243 DEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRI 302
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCF-PSPGIFNS 375
+ A + MR + +T+ L+ G L K+++ + + ++EG P I++
Sbjct: 303 DMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRV-----VEAYGLVEGVENPDISIYHG 357
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVL 427
L+ + + S A ++ +KM++ GC+P Y +L+ G G D L
Sbjct: 358 LIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGHLGRRGRKGPDPL 409
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 98/230 (42%), Gaps = 15/230 (6%)
Query: 259 MSNLGYSMDSFTLGCFAHSLCKAGKWRDA-LTLIEKEEFV-PDTILYTKMISGLCEASLF 316
M+ GY + T+ +LCK +A I+ +EF+ PD I Y MI G C+
Sbjct: 172 MNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEFIKPDEITYRTMIQGFCDVGDL 231
Query: 317 EEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIME-GCFPSPGIFNS 375
EA N M ++ + ++ L+K Q ++ +M+ + G G +
Sbjct: 232 IEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRV 291
Query: 376 LVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYS 435
++ C++ A K+ +M + G + + LI G+ L V+E AY
Sbjct: 292 MIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGL-----LVKRRVVE----AYG 342
Query: 436 EMLEVGVVLNKVNVSN-FARCLCGVGKFEKAFNVIREMMSKGFIPDIGTY 484
L GV +++ + + L + + +A V R+M+ +G P + TY
Sbjct: 343 --LVEGVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTY 390
>AT3G01580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:223529-225454 REVERSE
Length = 641
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 280 KAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFLNRM-RANSCIPNVVTY 338
K G+ +AL + ++ E PD + ++ M+SG + +A++F RM A+ P+ VT
Sbjct: 89 KCGRMIEALRMFDELE-KPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTL 147
Query: 339 RILLCGC--LRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKM 396
L+ C L +LGRC + +I G + NSL++ Y +SR + A L K +
Sbjct: 148 ITLVSACTKLSNSRLGRC--VHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMI 205
Query: 397 VK 398
+
Sbjct: 206 AE 207
>AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:868468-870279 FORWARD
Length = 603
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 103/244 (42%), Gaps = 19/244 (7%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N +I Y + N AL ++ K + +T +++ LD +H+
Sbjct: 199 NAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK 258
Query: 262 LGY----SMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFE 317
+ +++ + FA K G DA+++ EK + DT ++ MI E
Sbjct: 259 HSFCKYVKVNTALIDMFA----KCGSLDDAVSIFEKMRY-KDTQAWSAMIVAYANHGKAE 313
Query: 318 EAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIME-GCFPSPGIFNSL 376
++M RMR+ + P+ +T+ LL C ++ ++ S M+ + G PS + S+
Sbjct: 314 KSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSM 373
Query: 377 VHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSE 436
V R+ + AY+ + K+ P +++ IL+ + + L+LAE
Sbjct: 374 VDLLSRAGNLEDAYEFIDKL---PISPTPMLWRILLAACSSHNN------LDLAEKVSER 424
Query: 437 MLEV 440
+ E+
Sbjct: 425 IFEL 428
>AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1493684-1495381 REVERSE
Length = 548
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 92/226 (40%), Gaps = 6/226 (2%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
N +I Y QNG AL + D G ++T+ +++ + +H +S
Sbjct: 269 NSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSK 328
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMD 321
G+ D+ + + K G A E E DTI +T +I GL EA+
Sbjct: 329 TGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLE-KKDTIAWTVVIIGLASHGHGNEALS 387
Query: 322 FLNRMR-ANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMI-MEGCFPSPGIFNSLVHA 379
RM+ + P+ +TY +L C + +R + M + G P+ + +V
Sbjct: 388 IFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDI 447
Query: 380 YCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMD 425
R+ + A +L+K M +P ++ L+ G +E+L D
Sbjct: 448 LSRAGRFEEAERLVKTM---PVKPNVNIWGALLNGCDIHENLELTD 490
>AT4G18520.1 | Symbols: | INVOLVED IN: biological_process unknown;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9
growth stages; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT4G39530.1); Has
16698 Blast hits to 4567 proteins in 114 species: Archae
- 0; Bacteria - 4; Metazoa - 97; Fungi - 32; Plants -
16266; Viruses - 0; Other Eukaryotes - 299 (source: NCBI
BLink). | chr4:10215250-10217103 REVERSE
Length = 617
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Query: 279 CKAGKWRDALTLIEKEEFVP--DTILYTKMISGLCEASLFEEAMDFLNRMRANSCIPNVV 336
CK G+ RDA ++++ +P D + +T MISG EA+DFL M PN
Sbjct: 431 CKCGESRDAFNVLQQ---LPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPF 487
Query: 337 TYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHAYCRSRDYSYAYKLLKKM 396
TY L C + L + I S+ + + ++L+H Y + S A+++ M
Sbjct: 488 TYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSM 547
>AT5G55740.1 | Symbols: CRR21 | CRR21 (chlororespiratory reduction
21) | chr5:22561941-22564433 REVERSE
Length = 830
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 82/204 (40%), Gaps = 5/204 (2%)
Query: 202 NVLIRKYCQNGLWNAALE--ELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
N++I Y Q GL A+ +L RL+ Y +T L+ R E L V
Sbjct: 344 NLIISGYVQQGLVEDAIYMCQLMRLEKLKYDC--VTLATLMSAAARTENLKLGKEVQCYC 401
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEA 319
+ D K G DA + + D IL+ +++ E+ L EA
Sbjct: 402 IRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDST-VEKDLILWNTLLAAYAESGLSGEA 460
Query: 320 MDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHA 379
+ M+ PNV+T+ +++ LR Q+ K + M G P+ + ++++
Sbjct: 461 LRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNG 520
Query: 380 YCRSRDYSYAYKLLKKMVKCGCQP 403
++ A L+KM + G +P
Sbjct: 521 MVQNGCSEEAILFLRKMQESGLRP 544
>AT2G46050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18939262-18941034 FORWARD
Length = 590
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 92/224 (41%), Gaps = 17/224 (7%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFG-----YKASRLTYNALVIVFLRAEKLDTAYL 254
L N L+ Y NG+ + E G LK G ++ T+++L L A +++
Sbjct: 210 LWNALVSSYVLNGMID---EAFGLLKLMGSDKNRFRGDYFTFSSL----LSACRIEQGKQ 262
Query: 255 VHREMSNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEAS 314
+H + + Y D + K+ DA E V + + + MI G +
Sbjct: 263 IHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESM-VVRNVVSWNAMIVGFAQNG 321
Query: 315 LFEEAMDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFN 374
EAM +M + P+ +T+ +L C + + K++ +++ +G + N
Sbjct: 322 EGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVAN 381
Query: 375 SLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGN 418
SL+ +Y R+ + S A + +P V + +IG + +
Sbjct: 382 SLISSYSRNGNLSEALLCFHSIR----EPDLVSWTSVIGALASH 421
>AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6352771-6357083 REVERSE
Length = 939
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 9/201 (4%)
Query: 202 NVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSN 261
LI+ Y QN W+ A+E +++ G + +T ++ + ++
Sbjct: 396 TTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIK 455
Query: 262 LGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDT--ILYTKMISGLCEASLFEEA 319
L F H C +DA L ++ +P+ + + M++G +A L E+A
Sbjct: 456 LKLEGRVFVSTNLLHMYCLCLCLKDARKLFDE---MPERNLVTWNVMLNGYSKAGLIEQA 512
Query: 320 MDFLNRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCFPSPGIFNSLVHA 379
+ +++ ++V++ ++ GCLRK QL + M+ G PS + L+ A
Sbjct: 513 EELFDQITEK----DIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSA 568
Query: 380 YCRSRDYSYAYKLLKKMVKCG 400
RS S +L +VK G
Sbjct: 569 SARSVGSSKGLQLHGTIVKRG 589
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 95/237 (40%), Gaps = 11/237 (4%)
Query: 204 LIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREMSNLG 263
+I+ Y + G AL+ +++ G + S + +++ V L VH +
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Query: 264 YSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEAMDFL 323
+ D + K G+ A + ++ D I++ +ISG L EEA+
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFDRFS-SKDIIMWNSIISGYASHGLGEEALKIF 420
Query: 324 NRMRANSCIPNVVTYRILLCGCLRKKQLGRCKRILSLMIMEGCF-PSPGIFNSLVHAYCR 382
+ M ++ +PN VT +L C +L I M + C P+ ++ V R
Sbjct: 421 HEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGR 480
Query: 383 SRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVLELAETAYSEMLE 439
+ A +L++ M +P V+ L+G + L+LAE A ++ E
Sbjct: 481 AGQVDKAMELIESMT---IKPDATVWGALLGA------CKTHSRLDLAEVAAKKLFE 528
>AT4G21880.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 7 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT4G04790.1); Has 8610 Blast hits to 4206
proteins in 137 species: Archae - 1; Bacteria - 4;
Metazoa - 225; Fungi - 79; Plants - 8051; Viruses - 0;
Other Eukaryotes - 250 (source: NCBI BLink). |
chr4:11605156-11610651 FORWARD
Length = 871
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 368 PSPGIFNSLVHAYCRSRDYSYAYKLLKKMVKCGCQPGYVVYNILIGGICGNEDLPSMDVL 427
P+ ++NS++ Y R + + A K+LK+M + +P V ++ LI CG E +
Sbjct: 524 PNSSMYNSIMAGYFREKKVNSALKVLKEMKEADVKPDSVTFSYLI-NYCGEEATIA---- 578
Query: 428 ELAETAYSEMLEVGVVLNKVNVSNFARCLCGVGKFEKAFNVIREM 472
Y EM + GV +NK + + G+FEKA V+ ++
Sbjct: 579 ----KYYKEMKQAGVEVNKHVYMSLVKAYASCGQFEKAKQVLMDL 619
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Query: 200 LLNVLIRKYCQNGLWNAALEELGRLKDFGYKASRLTYNALVIVFLRAEKLDTAYLVHREM 259
L N +IR + +NGL+ ALE G+L++ + T+ +++ + LV+ ++
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 260 SNLGYSMDSFTLGCFAHSLCKAGKWRDALTLIEKEEFVPDTILYTKMISGLCEASLFEEA 319
++G+ D F + G A + + E V D + + +ISG +EEA
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFD-EMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 320 MDFLNRMRANSCIPNVVTYRILL 342
++ + ++ + +P+ T +L
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVL 214