Jatropha Genome Database

JcCB0795791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0795791.10 + phase: 0 /partial
         (217 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G59380.1 | Symbols: FTA, PLP, ATFTA, PFT/PGGT-IALPHA | FTA (F...   296   8e-81
AT4G24490.2 | Symbols:  | protein prenyltransferase | chr4:12655...    63   1e-10
AT4G24490.1 | Symbols:  | protein prenyltransferase | chr4:12655...    63   1e-10

>AT3G59380.1 | Symbols: FTA, PLP, ATFTA, PFT/PGGT-IALPHA | FTA
           (FARNESYLTRANSFERASE A); farnesyltranstransferase/
           protein heterodimerization/ protein prenyltransferase |
           chr3:21944209-21945781 FORWARD
          Length = 326

 Score =  296 bits (757), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 144/211 (68%), Positives = 167/211 (79%), Gaps = 4/211 (1%)

Query: 5   HHRRWAAEKLGIDATAKELEFTRKILSLDAKNYHAWSHRQWVLQALGGWEDELNYIRQLL 64
           HHRRW AEKLG D   +ELEFTR++LSLDAK+YHAWSHRQW L+ALGGWEDEL+Y  +LL
Sbjct: 113 HHRRWVAEKLGPDVAGRELEFTRRVLSLDAKHYHAWSHRQWTLRALGGWEDELDYCHELL 172

Query: 65  EDDVFNNSAWNQRYFVITRSPFLGGLKAMRESEVKYTIEAILANPENESPWRYLRGLYKD 124
           E DVFNNSAWNQRY+VIT+SP LGGL+AMRESEV YTI+AIL NP NES WRYL+ LYKD
Sbjct: 173 EADVFNNSAWNQRYYVITQSPLLGGLEAMRESEVSYTIKAILTNPANESSWRYLKALYKD 232

Query: 125 DTESWINDHQVSTVCLKVLS-VKTNHIFALSTLLDLLCHGFKAKQEFRDAVDALRASDPD 183
           D ESWI+D  VS+VCL VLS     H FALSTLLDLLC G +   E +D+V AL   +  
Sbjct: 233 DKESWISDPSVSSVCLNVLSRTDCFHGFALSTLLDLLCDGLRPTNEHKDSVRALANEE-- 290

Query: 184 PPEPDLAKAVCSVLERVDPMRVNYWIWRKNK 214
            PE +LA  VC++L RVDP+R NYW WRK+K
Sbjct: 291 -PETNLANLVCTILGRVDPVRANYWAWRKSK 320


>AT4G24490.2 | Symbols:  | protein prenyltransferase |
           chr4:12655330-12658103 REVERSE
          Length = 678

 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 10/120 (8%)

Query: 5   HHRRWAAEKLGIDATAKELEFTRKILSLDAKNYHAWSHRQWVLQALGGWE-DELNYIRQL 63
           HHR+W   K G  +   EL    K   LD++N+HAW++R++V++     E DEL Y   +
Sbjct: 109 HHRKWVLSK-GHSSVGNELRLLEKFQKLDSRNFHAWNYRRFVVELTNRSEQDELQYTDDM 167

Query: 64  LEDDVFNNSAWNQRYFVITR------SPFLGGLKAMRESEVKYTIEAILANPENESPWRY 117
           + ++  N SAW+ R  +++         F+  +K   E +  ++  AI   P+++S W Y
Sbjct: 168 INNNFSNYSAWHNRSVLLSSLLAQNADGFMPNIKIPEEYDFVHS--AIFTEPDDQSGWFY 225


>AT4G24490.1 | Symbols:  | protein prenyltransferase |
           chr4:12655330-12658103 REVERSE
          Length = 678

 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 10/120 (8%)

Query: 5   HHRRWAAEKLGIDATAKELEFTRKILSLDAKNYHAWSHRQWVLQALGGWE-DELNYIRQL 63
           HHR+W   K G  +   EL    K   LD++N+HAW++R++V++     E DEL Y   +
Sbjct: 109 HHRKWVLSK-GHSSVGNELRLLEKFQKLDSRNFHAWNYRRFVVELTNRSEQDELQYTDDM 167

Query: 64  LEDDVFNNSAWNQRYFVITR------SPFLGGLKAMRESEVKYTIEAILANPENESPWRY 117
           + ++  N SAW+ R  +++         F+  +K   E +  ++  AI   P+++S W Y
Sbjct: 168 INNNFSNYSAWHNRSVLLSSLLAQNADGFMPNIKIPEEYDFVHS--AIFTEPDDQSGWFY 225