Jatropha Genome Database
- JcCB0776371.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0776371.10 + phase: 1 /partial
(167 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G56680.1 | Symbols: SYNC1, EMB2755, SYNC1 ARATH | SYNC1; ATP ... 305 7e-84
AT1G70980.1 | Symbols: SYNC3 | SYNC3; ATP binding / aminoacyl-tR... 295 1e-80
AT4G17300.1 | Symbols: NS1, OVA8, ATNS1 | NS1; asparagine-tRNA l... 215 9e-57
AT3G07420.1 | Symbols: NS2, ATNS2, SYNC2_ARATH, SYNC2 | NS2; asp... 194 2e-50
AT4G31180.2 | Symbols: | aspartyl-tRNA synthetase, putative / a... 85 2e-17
AT4G31180.1 | Symbols: | aspartyl-tRNA synthetase, putative / a... 85 2e-17
AT4G26870.1 | Symbols: | aspartyl-tRNA synthetase, putative / a... 81 3e-16
>AT5G56680.1 | Symbols: SYNC1, EMB2755, SYNC1 ARATH | SYNC1; ATP
binding / aminoacyl-tRNA ligase/ asparagine-tRNA ligase/
aspartate-tRNA ligase/ nucleic acid binding / nucleotide
binding | chr5:22936645-22938841 FORWARD
Length = 572
Score = 305 bits (782), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 141/166 (84%), Positives = 157/166 (94%)
Query: 2 SVTAFERISYTEAVQLLEKAVQGGKQFENKVEWGIDLASEHERYLTEVLFQKPVIVYNYP 61
+ T F RI+YT+A++LLE+AV GK+F+N VEWGIDLASEHERYLTEVLFQKP+IVYNYP
Sbjct: 407 ASTPFGRITYTKAIELLEEAVAKGKEFDNNVEWGIDLASEHERYLTEVLFQKPLIVYNYP 466
Query: 62 KGIKAFYMRLNDDSKTVAAMDVLVPKVGELIGGSQREERLEVIQQRIVEMGLPLEPYEWY 121
KGIKAFYMRLNDD KTVAAMDVLVPKVGELIGGSQREER +VI++RI EMGLP+EPYEWY
Sbjct: 467 KGIKAFYMRLNDDEKTVAAMDVLVPKVGELIGGSQREERYDVIKKRIEEMGLPIEPYEWY 526
Query: 122 LDLRRFGTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGRADL 167
LDLRR+GTVKHCGFGLGFERMILFATG+DNIRDVIPFPRYPG+ADL
Sbjct: 527 LDLRRYGTVKHCGFGLGFERMILFATGLDNIRDVIPFPRYPGKADL 572
>AT1G70980.1 | Symbols: SYNC3 | SYNC3; ATP binding / aminoacyl-tRNA
ligase/ asparagine-tRNA ligase/ aspartate-tRNA ligase/
nucleic acid binding / nucleotide binding |
chr1:26762339-26764394 FORWARD
Length = 571
Score = 295 bits (755), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 141/166 (84%), Positives = 154/166 (92%), Gaps = 2/166 (1%)
Query: 4 TAFERISYTEAVQLLEKAVQGGKQ-FENKVEWGIDLASEHERYLTEVLF-QKPVIVYNYP 61
+F+R++YTEA++ LEKAV GK F+NKVEWGIDLASEHERYLTEV F QKP+IVYNYP
Sbjct: 406 ASFKRVTYTEAIERLEKAVAQGKVVFDNKVEWGIDLASEHERYLTEVEFDQKPIIVYNYP 465
Query: 62 KGIKAFYMRLNDDSKTVAAMDVLVPKVGELIGGSQREERLEVIQQRIVEMGLPLEPYEWY 121
KGIKAFYMRLNDD KTVAAMDVLVPKVGELIGGSQREER +VI+QRI EMGLP+EPYEWY
Sbjct: 466 KGIKAFYMRLNDDEKTVAAMDVLVPKVGELIGGSQREERYDVIKQRIEEMGLPMEPYEWY 525
Query: 122 LDLRRFGTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGRADL 167
LDLRR+GTVKHCGFGLGFERMI FATGIDNIRDVIPFPRYPG+ADL
Sbjct: 526 LDLRRYGTVKHCGFGLGFERMIQFATGIDNIRDVIPFPRYPGKADL 571
>AT4G17300.1 | Symbols: NS1, OVA8, ATNS1 | NS1; asparagine-tRNA
ligase | chr4:9681558-9684833 FORWARD
Length = 567
Score = 215 bits (548), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 104/163 (63%), Positives = 130/163 (79%), Gaps = 4/163 (2%)
Query: 6 FERISYTEAVQLLEKAVQGGKQFENKVEWGIDLASEHERYLTEVLFQ-KPVIVYNYPKGI 64
F ++ YT+A+++L KA K+F+ V+WG+DL SEHERY+TE F +PVI+ +YPK I
Sbjct: 408 FLQLGYTDAIEILLKA---NKKFDFPVKWGLDLQSEHERYITEEAFGGRPVIIRDYPKEI 464
Query: 65 KAFYMRLNDDSKTVAAMDVLVPKVGELIGGSQREERLEVIQQRIVEMGLPLEPYEWYLDL 124
KAFYMR NDD KTVAAMD+LVP++GELIGGSQREERLEV++ R+ E+ L E Y WYLDL
Sbjct: 465 KAFYMRENDDGKTVAAMDMLVPRIGELIGGSQREERLEVLEARLDELKLNKESYWWYLDL 524
Query: 125 RRFGTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGRADL 167
RR+G+V H GFGLGFER++ F TGIDNIRDVIPFPR P A+
Sbjct: 525 RRYGSVPHAGFGLGFERLVQFVTGIDNIRDVIPFPRTPASAEF 567
>AT3G07420.1 | Symbols: NS2, ATNS2, SYNC2_ARATH, SYNC2 | NS2;
asparagine-tRNA ligase | chr3:2374179-2376644 REVERSE
Length = 638
Score = 194 bits (494), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 91/159 (57%), Positives = 116/159 (72%), Gaps = 2/159 (1%)
Query: 8 RISYTEAVQLLEKAVQGGKQFENKVEWGIDLASEHERYLTEVLFQKPVIVYNYPKGIKAF 67
R SYTE + LL+KA +FE K EWG+ L +EH YLT+ +++ PVIV+ YPK IK F
Sbjct: 481 RFSYTEVISLLQKATT--TKFETKPEWGVALTTEHLSYLTDEIYKGPVIVHTYPKAIKQF 538
Query: 68 YMRLNDDSKTVAAMDVLVPKVGELIGGSQREERLEVIQQRIVEMGLPLEPYEWYLDLRRF 127
Y+RLNDD KTVAA D++VPKVG +I GSQ EER E++ RI E G E +EWYLDLRR
Sbjct: 539 YVRLNDDKKTVAAFDLVVPKVGVVITGSQNEERFEILDARIGESGFTREKFEWYLDLRRH 598
Query: 128 GTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGRAD 166
GTVKH G L E+M+L+ATG+ +I+D IPFPR G+A+
Sbjct: 599 GTVKHSGISLSMEQMLLYATGLPDIKDAIPFPRSWGKAN 637
>AT4G31180.2 | Symbols: | aspartyl-tRNA synthetase, putative /
aspartate--tRNA ligase, putative |
chr4:15156696-15159362 FORWARD
Length = 558
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 13/162 (8%)
Query: 8 RISYTEAVQLLEKAVQGGKQFENKVEWGIDLASEHERYLTEVLFQKP----VIVYNYPKG 63
R+++ E VQ+L++A +V+ DL +E ER L +++ +K I++ YPK
Sbjct: 402 RLTFEEGVQMLKEAGV-------EVDPLGDLNTESERKLGQLVLEKYNTEFYILHRYPKA 454
Query: 64 IKAFY-MRLNDDSKTVAAMDVLVPKVGELIGGSQREERLEVIQQRIVEMGLPLEPYEWYL 122
++ FY M D+ + DV + + E+I G+QR EV++QR E G+ ++ Y+
Sbjct: 455 VRPFYTMTCADNPLYSNSFDVFI-RGEEIISGAQRVHIPEVLEQRAGECGIDVKTISTYI 513
Query: 123 DLRRFGTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGR 164
D R+G H GFG+G ER+++ ++NIR FPR P R
Sbjct: 514 DSFRYGAPLHGGFGVGLERVVMLFCALNNIRKTSLFPRDPQR 555
>AT4G31180.1 | Symbols: | aspartyl-tRNA synthetase, putative /
aspartate--tRNA ligase, putative |
chr4:15156696-15159362 FORWARD
Length = 558
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 90/162 (55%), Gaps = 13/162 (8%)
Query: 8 RISYTEAVQLLEKAVQGGKQFENKVEWGIDLASEHERYLTEVLFQKP----VIVYNYPKG 63
R+++ E VQ+L++A +V+ DL +E ER L +++ +K I++ YPK
Sbjct: 402 RLTFEEGVQMLKEAGV-------EVDPLGDLNTESERKLGQLVLEKYNTEFYILHRYPKA 454
Query: 64 IKAFY-MRLNDDSKTVAAMDVLVPKVGELIGGSQREERLEVIQQRIVEMGLPLEPYEWYL 122
++ FY M D+ + DV + + E+I G+QR EV++QR E G+ ++ Y+
Sbjct: 455 VRPFYTMTCADNPLYSNSFDVFI-RGEEIISGAQRVHIPEVLEQRAGECGIDVKTISTYI 513
Query: 123 DLRRFGTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGR 164
D R+G H GFG+G ER+++ ++NIR FPR P R
Sbjct: 514 DSFRYGAPLHGGFGVGLERVVMLFCALNNIRKTSLFPRDPQR 555
>AT4G26870.1 | Symbols: | aspartyl-tRNA synthetase, putative /
aspartate--tRNA ligase, putative |
chr4:13505381-13507619 FORWARD
Length = 532
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 90/162 (55%), Gaps = 13/162 (8%)
Query: 8 RISYTEAVQLLEKAVQGGKQFENKVEWGIDLASEHERYLTEVLFQKP----VIVYNYPKG 63
R+++ E +Q+L++A + +V+ DL +E ER L +++ +K +++ YP
Sbjct: 376 RLTFAEGIQMLKEAGE-------EVDPLGDLNTESERKLGQLVLEKYKTEFYMLHRYPSA 428
Query: 64 IKAFY-MRLNDDSKTVAAMDVLVPKVGELIGGSQREERLEVIQQRIVEMGLPLEPYEWYL 122
++ FY M +DS + DV + + E++ G+QR E++++R E G+ ++ Y+
Sbjct: 429 VRPFYTMPYENDSNYSNSFDVFI-RGEEIMSGAQRIHDPELLEKRARECGIDVKTISTYI 487
Query: 123 DLRRFGTVKHCGFGLGFERMILFATGIDNIRDVIPFPRYPGR 164
D R+G H GFG+G ER+++ ++NIR FPR R
Sbjct: 488 DAFRYGAPPHGGFGVGLERVVMLLCALNNIRKTSLFPRDSQR 529