Jatropha Genome Database
- JcCB0771681.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0771681.10 - phase: 0 /partial
(70 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-12
AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-12
AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED I... 67 3e-12
AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 5e-12
AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261)... 65 9e-12
AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY REDUCTIO... 63 5e-11
AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-11
AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 7e-11
AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 8e-11
AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 9e-11
AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-10
AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION ... 60 3e-10
AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD 60 3e-10
AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 4e-10
AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknow... 59 5e-10
AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-10
AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 7e-10
AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 9e-10
AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 9e-10
AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 9e-10
AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 9e-10
AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 9e-10
AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-09
AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-09
AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-09
AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-09
AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-09
AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 57 2e-09
AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-09
AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-09
AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-09
AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED TRIBUT... 57 3e-09
AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-09
AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-09
AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 56 6e-09
AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 7e-09
AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 8e-09
AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 8e-09
AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 9e-09
AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 9e-09
AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-08
AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-08
AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-08
AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-08
AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-08
AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-08
AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-08
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-08
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-08
AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-08
AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknow... 54 2e-08
AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-08
AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-08
AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-08
AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-08
AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 4e-08
AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 6e-08
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 7e-08
AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 7e-08
AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 7e-08
AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 8e-08
AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 8e-08
AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 9e-08
AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY REDUCTIO... 52 1e-07
AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-07
AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-07
AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-07
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-07
AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-07
AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-07
AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-07
AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-07
AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-07
AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-07
AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-07
AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR) repeat-co... 50 2e-07
AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-07
AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-07
AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-07
AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-07
AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-07
AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-07
AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-07
AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-07
AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-07
AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-07
AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 4e-07
AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 4e-07
AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 5e-07
AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 5e-07
AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-07
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-07
AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-07
AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 6e-07
AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 7e-07
AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 7e-07
AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknow... 49 8e-07
AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 8e-07
AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 8e-07
AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) | ... 49 8e-07
AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 8e-07
AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 9e-07
AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 9e-07
AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION ... 48 1e-06
AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 1e-06
AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 1e-06
AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 1e-06
AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 1e-06
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 1e-06
AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 47 2e-06
AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 2e-06
AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 2e-06
AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 2e-06
AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 47 2e-06
AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744)... 47 3e-06
AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 45 6e-06
AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 45 1e-05
>AT5G48910.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:19832969-19834909 REVERSE
Length = 646
Score = 67.4 bits (163), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/67 (49%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMV 63
G+EP +EHYGCMVDLL R GL+DEA +F L +P PD VIW+ LL A ++ + V
Sbjct: 406 GLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRV 465
Query: 64 AGKLLEL 70
A L+++
Sbjct: 466 ANILMDM 472
>AT2G02980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:868468-870279 FORWARD
Length = 603
Score = 66.6 bits (161), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
+ GI PS++HYG MVDLL R G +++AY+F +P +P P++WR LL A + + L AE
Sbjct: 360 KFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAE 419
Query: 62 MVAGKLLEL 70
V+ ++ EL
Sbjct: 420 KVSERIFEL 428
>AT3G26782.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED IN:
seed; EXPRESSED DURING: E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT3G23330.1); Has 13812 Blast hits to 4961
proteins in 140 species: Archae - 0; Bacteria - 2;
Metazoa - 58; Fungi - 30; Plants - 13522; Viruses - 0;
Other Eukaryotes - 200 (source: NCBI BLink). |
chr3:9850594-9852682 FORWARD
Length = 659
Score = 66.6 bits (161), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 4 LGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEM 62
G+EP +EHYGCMVDLL R G + +AYD + PD +IW +LL A ++ ++ AE+
Sbjct: 418 FGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEI 477
Query: 63 VAGKLLEL 70
+L EL
Sbjct: 478 SVARLFEL 485
>AT1G74630.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28030521-28032452 FORWARD
Length = 643
Score = 65.9 bits (159), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMVA 64
IEP +EHYGCMVDL R G + +AYDF +P P ++WRTLL A + + ++ AE V
Sbjct: 403 IEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVK 462
Query: 65 GKLLEL 70
+L EL
Sbjct: 463 QRLNEL 468
>AT3G49170.1 | Symbols: EMB2261 | EMB2261 (embryo defective 2261) |
chr3:18226954-18229600 REVERSE
Length = 850
Score = 65.1 bits (157), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMVA 64
I+P MEHY CMVDLLCR GL+ +A++F +P D ++WRT L A + + ++ A
Sbjct: 607 IKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAA 666
Query: 65 GKLLEL 70
K+LEL
Sbjct: 667 RKILEL 672
>AT1G59720.1 | Symbols: CRR28 | CRR28 (CHLORORESPIRATORY
REDUCTION28); endonuclease | chr1:21939868-21941784
REVERSE
Length = 638
Score = 62.8 bits (151), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTK 53
IEP++EHYGC+VDL+ R G I EA D + +P PD VIWR+LL A K
Sbjct: 389 IEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCK 437
>AT3G15930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5387444-5389690 FORWARD
Length = 687
Score = 62.4 bits (150), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMVA 64
IEPS+ HYGCMVD+L R GL+ EAY+ +P P+ ++W LL A + AE+ A
Sbjct: 501 IEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAA 560
Query: 65 GKLLEL 70
K+LEL
Sbjct: 561 KKILEL 566
>AT4G13650.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:7939611-7942898 REVERSE
Length = 1064
Score = 62.0 bits (149), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
E G+ P EHY C+VD+L R GL+ A +F +P PD ++WRTLL A ++ ++ E
Sbjct: 822 EYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGE 881
Query: 62 MVAGKLLEL 70
A LLEL
Sbjct: 882 FAAHHLLEL 890
>AT4G21065.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G33170.1); Has 16184 Blast hits to 5257
proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 118; Fungi - 47; Plants - 15742; Viruses - 0;
Other Eukaryotes - 273 (source: NCBI BLink). |
chr4:11246375-11247763 FORWARD
Length = 462
Score = 62.0 bits (149), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
E IEP +EH+GCMVDLL R G + +AY++ +P P+ VIWRTLL A T + AE
Sbjct: 220 EYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE 279
Query: 62 MVAGKLLEL 70
++L+L
Sbjct: 280 FARIQILQL 288
>AT4G21065.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: CRR28
(CHLORORESPIRATORY REDUCTION28); endonuclease
(TAIR:AT1G59720.1); Has 14270 Blast hits to 5372
proteins in 184 species: Archae - 1; Bacteria - 4;
Metazoa - 153; Fungi - 82; Plants - 13714; Viruses - 0;
Other Eukaryotes - 316 (source: NCBI BLink). |
chr4:11245976-11247763 FORWARD
Length = 595
Score = 61.6 bits (148), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
E IEP +EH+GCMVDLL R G + +AY++ +P P+ VIWRTLL A T + AE
Sbjct: 353 EYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE 412
Query: 62 MVAGKLLEL 70
++L+L
Sbjct: 413 FARIQILQL 421
>AT5G08510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2753099-2754731 FORWARD
Length = 511
Score = 60.5 bits (145), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMVA 64
I P +EHYGCM+DLL R G + EAYD +P PD V+W TLL A + + ++ AE+ +
Sbjct: 349 ISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIAS 408
Query: 65 GKLLEL 70
L +L
Sbjct: 409 EALFKL 414
>AT2G45350.1 | Symbols: CRR4 | CRR4 (CHLORORESPIRATORY REDUCTION 4)
| chr2:18694816-18696636 REVERSE
Length = 606
Score = 59.7 bits (143), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMVA 64
IEP ++HYGCMVD+L R G I+ A + +P P+ VIWRT L A + ++ + E+VA
Sbjct: 476 IEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVA 535
Query: 65 GKLL 68
L+
Sbjct: 536 KHLI 539
>AT3G62890.1 | Symbols: | binding | chr3:23246168-23247973 FORWARD
Length = 573
Score = 59.7 bits (143), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAE 61
E GI PS++HYGCMVDL R GLI EA F +P PD +IW +LL + +RML +
Sbjct: 331 EFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL---SGSRMLGDIK 387
Query: 62 MVAGKLLEL 70
G L L
Sbjct: 388 TCEGALKRL 396
>AT5G08490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2745208-2747757 REVERSE
Length = 849
Score = 59.7 bits (143), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMV 63
G++P+ME Y C VDL+ RGG +D+AY F +P P+ IW TLL A T + V
Sbjct: 699 GMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSV 758
Query: 64 AGKLLE 69
A LL+
Sbjct: 759 ANHLLQ 764
>AT5G04780.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: MEF1
(MITOCHONDRIAL RNA EDITING FACTOR 1) (TAIR:AT5G52630.1);
Has 13798 Blast hits to 4918 proteins in 150 species:
Archae - 0; Bacteria - 4; Metazoa - 59; Fungi - 36;
Plants - 13447; Viruses - 0; Other Eukaryotes - 252
(source: NCBI BLink). | chr5:1384564-1386447 FORWARD
Length = 627
Score = 59.3 bits (142), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMV 63
G+ P++ HY CMVD+L R GL+ EAY+ IP P IW +LL + + L+ AE+
Sbjct: 387 GLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVA 446
Query: 64 AGKLLEL 70
A KL EL
Sbjct: 447 AEKLFEL 453
>AT2G01510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:230752-232506 REVERSE
Length = 584
Score = 58.9 bits (141), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMVA 64
+EP EHY CMVDLL R GL++EAY+F +P PD IW LL A +R + + VA
Sbjct: 345 LEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVA 404
Query: 65 GKLLE 69
L+E
Sbjct: 405 DVLVE 409
>AT1G15510.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:5329111-5331711 FORWARD
Length = 866
Score = 58.5 bits (140), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 1 MLELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQK 59
M + G+ P+++HY C+VDLL R G + EA+ F +P TPDP +W LL A + +
Sbjct: 624 MEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDL 683
Query: 60 AEMVAGKLLEL 70
E+ A + EL
Sbjct: 684 GELSAQHIFEL 694
>AT1G74400.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:27963953-27965341 FORWARD
Length = 462
Score = 58.5 bits (140), Expect = 9e-10, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 1 MLELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQK 59
+++ ++P H+GCMVDL CR G + +A++F +P P+ VIWRTLL A + + ++
Sbjct: 303 IMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVEL 362
Query: 60 AEMVAGKLLEL 70
E V ++ EL
Sbjct: 363 GEEVQRRIFEL 373
>AT2G40720.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:16987269-16989851 FORWARD
Length = 860
Score = 58.5 bits (140), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAE 61
+ GIEP+MEHY MVDLL R GL++EAY F +P D IW LL A + ++
Sbjct: 707 DYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGI 766
Query: 62 MVAGKLLEL 70
+ A KLL +
Sbjct: 767 LSAEKLLRM 775
>AT1G20230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:7009570-7011852 FORWARD
Length = 760
Score = 58.2 bits (139), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
E GI+P +EHY CMV+LL R G + EAYD +P PD +W LL + + AE
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAE 577
Query: 62 MVAGKLLEL 70
+ A KL L
Sbjct: 578 IAAEKLFHL 586
>AT4G18840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:10338719-10340356 REVERSE
Length = 545
Score = 58.2 bits (139), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPTPD-PVIWRTLLVAYTKNRMLQKAEMVA 64
+EP++EHYGCMVDLL R G I+EA + IP + ++ +LL A + L++AE +A
Sbjct: 437 VEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIA 496
Query: 65 GKLLEL 70
+LLEL
Sbjct: 497 NRLLEL 502
>AT2G13600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:5671493-5673586 FORWARD
Length = 697
Score = 58.2 bits (139), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAE 61
+ G+ P +HY CMVDLL R G ++EA +P PD VIW +LL A +R + +
Sbjct: 522 DFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGK 581
Query: 62 MVAGKLLEL 70
VA KLLE+
Sbjct: 582 YVAEKLLEV 590
>AT4G21300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11336479-11339052 FORWARD
Length = 857
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
+ GI+P EHY C+VDL R G + EAY+ +P PD +W TLL A ++ ++ AE
Sbjct: 673 DYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAE 732
Query: 62 MVAGKLLEL 70
+ + KL++L
Sbjct: 733 VASSKLMDL 741
>AT2G36730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15405068-15406573 REVERSE
Length = 501
Score = 58.2 bits (139), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVA 50
I+P M HYG MVD+L R G ++EAYDF +P PD V+WRTLL A
Sbjct: 346 IKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSA 391
>AT5G65570.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26203968-26206184 FORWARD
Length = 738
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 11 EHYGCMVDLLCRGGLIDEAYDFALIIPTPDPVIWRTLLVAYTKNRMLQKAEMVAGKLLEL 70
+HY CMVDLL R G ++EA + PD V+WRTLL A +R ++ AE + K+LE+
Sbjct: 505 DHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEI 564
>AT1G53600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:20001263-20005795 FORWARD
Length = 839
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMVA 64
IEP +HY CMVDLL R GL+D+A + +P P +W +LL A + + AE+ A
Sbjct: 571 IEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAA 630
Query: 65 GKLLEL 70
KL+EL
Sbjct: 631 KKLIEL 636
>AT1G31920.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11461864-11463684 REVERSE
Length = 606
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 1 MLELG-IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQ 58
ML+ G +EP+ EHYGC+VDLL R GL++EA + IP + VIWRT L + ++
Sbjct: 361 MLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIE 420
Query: 59 KAEMVAGKLLEL 70
++ A +LL+L
Sbjct: 421 LGQIAAQELLKL 432
>AT5G40405.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT5G66520.1); Has
12548 Blast hits to 5076 proteins in 168 species: Archae
- 0; Bacteria - 2; Metazoa - 87; Fungi - 66; Plants -
12146; Viruses - 0; Other Eukaryotes - 247 (source: NCBI
BLink). | chr5:16169315-16171153 FORWARD
Length = 612
Score = 57.4 bits (137), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
E GIEP +EHYGC+VDL R G +++A +P P +W +LL A + L+
Sbjct: 370 EFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGV 429
Query: 62 MVAGKLLEL 70
+ + K+LEL
Sbjct: 430 LASKKMLEL 438
>AT3G47530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17517382-17519157 REVERSE
Length = 591
Score = 57.0 bits (136), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
E I+P++ HYGC+VDLL R L+D+AY + PD IWRTLL A + ++ E
Sbjct: 348 EFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGE 407
Query: 62 MVAGKLLEL 70
V L+EL
Sbjct: 408 RVISHLIEL 416
>AT1G34160.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12441393-12443256 FORWARD
Length = 558
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMV 63
G+E +M+HYGC+VDLL R G + EA+D + PDPV+W++LL A ++ AE+
Sbjct: 338 GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIA 397
Query: 64 AGKLLEL 70
+ ++ E+
Sbjct: 398 SREIKEM 404
>AT5G39350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:15750929-15752962 FORWARD
Length = 677
Score = 56.6 bits (135), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 12 HYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMVAGKLLEL 70
HY C+VDLL R G +DEAY+ IP P +W LL A + +Q EM A KL EL
Sbjct: 563 HYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFEL 622
>AT4G18750.1 | Symbols: DOT4 | DOT4 (DEFECTIVELY ORGANIZED
TRIBUTARIES 4) | chr4:10304850-10307465 FORWARD
Length = 871
Score = 56.6 bits (135), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAE 61
E IEP++EHY C+VD+L R G + +AY F +P PD IW LL + ++ AE
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAE 688
Query: 62 MVAGKLLEL 70
VA K+ EL
Sbjct: 689 KVAEKVFEL 697
>AT3G11460.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:3608250-3610121 FORWARD
Length = 623
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAE 61
E +EP EHY C+VDLL R G +DEA +F +P PD +W LL A ++ + AE
Sbjct: 387 EYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAE 446
Query: 62 MVAGKLLEL 70
+ K++E
Sbjct: 447 LAFAKVIEF 455
>AT5G59200.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:23888793-23890565 REVERSE
Length = 590
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMVA 64
+EP +EHYGC+VDLL R G ++EAY F IP PD ++ TLL A + ++ E +A
Sbjct: 434 VEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIA 493
Query: 65 GKLLE 69
+L E
Sbjct: 494 KRLFE 498
>AT5G50990.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: F mature embryo stage,
petal differentiation and expansion stage, D bilateral
stage, E expanded cotyledon stage; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: binding
(TAIR:AT3G62890.1); Has 13116 Blast hits to 4886
proteins in 160 species: Archae - 0; Bacteria - 0;
Metazoa - 67; Fungi - 72; Plants - 12769; Viruses - 0;
Other Eukaryotes - 208 (source: NCBI BLink). |
chr5:20739453-20741281 FORWARD
Length = 534
Score = 55.8 bits (133), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 4 LGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLL 48
I+P +EHYG MVDLL R G + EAY+ +P PD VIWR+LL
Sbjct: 296 FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
>AT2G03880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:1181560-1183452 FORWARD
Length = 630
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMV 63
GI+P EHYGCM+DLL + G +D+A + PD V WRTLL A R + AE
Sbjct: 390 GIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYA 449
Query: 64 AGKLLEL 70
A K++ L
Sbjct: 450 AKKVIAL 456
>AT2G44880.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:18505239-18506906 FORWARD
Length = 555
Score = 55.5 bits (132), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 1 MLELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQK 59
M E+G+ +EHYGCMVDLL R G + EA D +P P+ +I + L A + + +++
Sbjct: 400 MREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIER 459
Query: 60 AEMVAGKLLEL 70
AE + K +EL
Sbjct: 460 AERILKKAVEL 470
>AT4G39530.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18374736-18377240 REVERSE
Length = 834
Score = 55.1 bits (131), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MLELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQK 59
ML GIEP EHY CMV LL R G +++A + +PT P ++WR+LL K ++
Sbjct: 682 MLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVEL 741
Query: 60 AEMVA 64
AE A
Sbjct: 742 AEHAA 746
>AT1G43980.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:16685832-16689502 REVERSE
Length = 633
Score = 55.1 bits (131), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMV 63
G+ P EHY C+++LLCR G+I+EA D A IP P IW +L A + AE V
Sbjct: 468 GVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETV 527
Query: 64 AGKLLE 69
A +LE
Sbjct: 528 AKTMLE 533
>AT3G18970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:6543699-6545117 REVERSE
Length = 472
Score = 55.1 bits (131), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 4 LGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEM 62
G+ P +EHYGC+VDLL + G I EAY F L +P PD ++ R+L A + E
Sbjct: 353 FGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEE 412
Query: 63 VAGKLLEL 70
+ LLE+
Sbjct: 413 IGKALLEI 420
>AT4G02750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:1221116-1223461 REVERSE
Length = 781
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
+ G+ P+ +HY CMVDLL R GL+++A++ +P PD IW TLL A + + AE
Sbjct: 539 DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAE 598
Query: 62 MVAGKLLEL 70
A K+ +
Sbjct: 599 TAADKIFAM 607
>AT5G66520.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:26551879-26553741 FORWARD
Length = 620
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMVA 64
++P++EHYGC+VDLL R GL+DEA F +P P+ VIW LL A ++ ++ E +
Sbjct: 380 LKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIG 439
Query: 65 GKLLEL 70
L+ +
Sbjct: 440 EILIAI 445
>AT4G38010.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:17859582-17861261 REVERSE
Length = 559
Score = 54.3 bits (129), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 11/69 (15%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAE 61
E + P +EHYGCM+DLLCR GL+DEA + +P PD I +L A KNR
Sbjct: 437 EYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA-CKNR------ 489
Query: 62 MVAGKLLEL 70
G L+EL
Sbjct: 490 ---GTLMEL 495
>AT5G08310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:2670134-2675254 REVERSE
Length = 1280
Score = 54.3 bits (129), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
E G EP EHY CMVD+L R GL+ +A+DF +P P + LL + L+ AE
Sbjct: 1118 ESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAE 1177
Query: 62 MVAGKLLEL 70
V KL+EL
Sbjct: 1178 TVGKKLIEL 1186
>AT1G28690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:10080042-10081604 REVERSE
Length = 520
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAE 61
+ ++P MEHY C+VDL+ R G +++A++FA +P PD IW LL + + ++ A
Sbjct: 403 DYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELAS 462
Query: 62 MVAGKLLEL 70
+ A +L +L
Sbjct: 463 IAASELFKL 471
>AT5G43790.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:17592099-17593481 REVERSE
Length = 460
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMV 63
GIEP +EHYGC+VDLL R G ++EA + +P P+ +WR+ L + + ++ E+
Sbjct: 348 GIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIA 407
Query: 64 AGKLLEL 70
LL L
Sbjct: 408 LKHLLGL 414
>AT3G49710.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18437845-18440010 FORWARD
Length = 721
Score = 54.3 bits (129), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMVA 64
IEP EHY CM+DLL R G ++EA F +P P V W LL A K++ + AE A
Sbjct: 479 IEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAA 538
Query: 65 GKLL 68
+L+
Sbjct: 539 NELM 542
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD
Length = 743
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
E GI PS+ HY CM+DL R G ++EA F +P PD + W TLL A L+ +
Sbjct: 501 EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGK 560
Query: 62 MVAGKLLEL 70
A L+EL
Sbjct: 561 WAAESLIEL 569
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-449838 REVERSE
Length = 500
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMV 63
GI P++EH CMVDLL R G +DEA+DF + PD IW L + +R L+ AE+
Sbjct: 260 GIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIA 319
Query: 64 AGKL 67
+L
Sbjct: 320 WKRL 323
>AT3G47840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:17651912-17654032 FORWARD
Length = 706
Score = 53.5 bits (127), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMVA 64
+ P+ EHYGCMVDLLCR G + +A + D V+W TLL+A +++ A
Sbjct: 544 MRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAA 603
Query: 65 GKLLEL 70
++LEL
Sbjct: 604 ERILEL 609
>AT4G16470.1 | Symbols: | INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 14
plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, petal differentiation and expansion
stage, D bilateral stage, E expanded cotyledon stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: CRR22 (CHLORORESPIRATORY REDUCTION22);
endonuclease (TAIR:AT1G11290.1); Has 12729 Blast hits to
4676 proteins in 132 species: Archae - 0; Bacteria - 0;
Metazoa - 31; Fungi - 25; Plants - 12474; Viruses - 0;
Other Eukaryotes - 199 (source: NCBI BLink). |
chr4:9287862-9289541 REVERSE
Length = 485
Score = 53.5 bits (127), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPTPD-PVIWRTLLVAYTKNRMLQKAE 61
+ GIEP +HY MVD L R G + EAY+F + P + P +W +LL A + ++ E
Sbjct: 323 DYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLE 382
Query: 62 MVAGKLLEL 70
+ A K LEL
Sbjct: 383 LAATKFLEL 391
>AT5G15300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4968384-4970030 REVERSE
Length = 548
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVA 50
IEP+++HYGCMVD+L R G ++EA+ F + P+ ++WRTLL A
Sbjct: 412 IEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGA 457
>AT3G12770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4056900-4059193 REVERSE
Length = 719
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 1 MLELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQK 59
M + I P +HY C++DLL R G +D+AY+ +P P +W LL A K+R ++
Sbjct: 450 MADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVEL 509
Query: 60 AEMVAGKLLEL 70
E A +L +
Sbjct: 510 GEYAAQQLFSI 520
>AT1G09220.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:2977952-2978968 REVERSE
Length = 338
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPTPDP-VIWRTLLVAYTKNRMLQKAE 61
E I P ++HYGC+VD+L R G ++EA AL IP + V+WR LL A + + AE
Sbjct: 224 EYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAE 283
Query: 62 MVAGKLLEL 70
V KL+EL
Sbjct: 284 RVTRKLMEL 292
>AT4G08210.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:5183813-5185873 REVERSE
Length = 686
Score = 53.1 bits (126), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
E G+EP +EHY C+VDLL + GL EA + +P PD IW +LL A ++
Sbjct: 573 EYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVT 632
Query: 62 MVAGKLLE 69
++A KLL+
Sbjct: 633 VIAEKLLK 640
>AT3G22690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8020757-8024534 REVERSE
Length = 978
Score = 52.8 bits (125), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 1 MLEL-GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQ 58
ML+L G+ P HYGCMVDLL R GL++EA +P P+ VIW +LL A ++
Sbjct: 597 MLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVE 656
Query: 59 KAEMVAGKL 67
A A K+
Sbjct: 657 MAAYAAEKI 665
>AT3G28660.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10739400-10740914 REVERSE
Length = 504
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMV 63
GI P EHY C+VDL+CR G +D+A D +P P +W LL ++ ++ E+
Sbjct: 352 GITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELA 411
Query: 64 AGKLLEL 70
LL+L
Sbjct: 412 VQNLLDL 418
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD
Length = 786
Score = 52.0 bits (123), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMVA 64
I P++ HY CMVDL R GL+ EA +F +P PD V W +LL A ++ + ++ A
Sbjct: 547 IIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAA 606
Query: 65 GKLLEL 70
+LL L
Sbjct: 607 ERLLLL 612
>AT1G04840.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1362867-1364962 REVERSE
Length = 665
Score = 52.0 bits (123), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 2 LELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKA 60
L+ IEP+++HY +VDLL R G ++EA++ +P PD W L A ++ ++A
Sbjct: 422 LDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRA 481
Query: 61 EMVAGKLLEL 70
E V+ LLEL
Sbjct: 482 ESVSQNLLEL 491
>AT3G50420.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:18710871-18713649 REVERSE
Length = 794
Score = 52.0 bits (123), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 1 MLELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPTP----DPVIWRTLLVAYTKNRM 56
M E GI+ +HY CMV+L+ + GL+DEA + LI +P +WRTLL A R
Sbjct: 630 MKEQGIKAGFKHYSCMVNLVSKAGLVDEALE--LIEQSPPGNNQAELWRTLLSACVNTRN 687
Query: 57 LQKAEMVAGKLLEL 70
LQ A ++L+L
Sbjct: 688 LQIGLYAAEQILKL 701
>AT1G33350.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:12090071-12091687 REVERSE
Length = 538
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 4 LGIEPSMEHYGCMVDLLCRGGLIDEAYD-FALIIPTPDPVIWRTLLVAYTKNRMLQKAEM 62
GIEP +EHYGC++DLL R G DEA + + + D IW +LL A + L AE+
Sbjct: 394 FGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEV 453
Query: 63 VAGKLLEL 70
L+ L
Sbjct: 454 AVKNLVAL 461
>AT4G25270.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:12937253-12938836 REVERSE
Length = 527
Score = 52.0 bits (123), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP----TPDPVIWRTLLVAYTKNRMLQ 58
E GI+P MEHY CMV+L R G+++EAY ++I+ P +W LL A +
Sbjct: 420 EYGIDPKMEHYACMVNLYGRAGMMEEAY--SMIVQEMGLEAGPTVWGALLYACYLHGNTD 477
Query: 59 KAEMVAGKLLEL 70
E+ A +L EL
Sbjct: 478 IGEVAAQRLFEL 489
>AT3G03580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:860695-863343 REVERSE
Length = 882
Score = 52.0 bits (123), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMVA 64
I+P +EHY C+VDLL R I +A +F +P PD IW ++L A + ++ AE V+
Sbjct: 642 IDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVS 701
Query: 65 GKLLEL 70
+++EL
Sbjct: 702 RRIIEL 707
>AT1G11290.1 | Symbols: CRR22 | CRR22 (CHLORORESPIRATORY
REDUCTION22); endonuclease | chr1:3791454-3793883
REVERSE
Length = 809
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPTPDPV-IWRTLLVAYTKNRMLQKAEMVA 64
IE SM+HYG MVDLL R G ++EA+DF + +P V ++ +L A ++ + AE A
Sbjct: 571 IELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAA 630
Query: 65 GKLLEL 70
+L EL
Sbjct: 631 ERLFEL 636
>AT3G05340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1524071-1526047 REVERSE
Length = 658
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMV 63
GIEP EHY C++D+L R GL+ EA F +P PD IW+ LL A + + + E
Sbjct: 489 GIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYA 548
Query: 64 AGKLLE 69
A +L +
Sbjct: 549 AEQLFQ 554
>AT3G56550.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:20952896-20954641 REVERSE
Length = 581
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAE 61
+ + P+++HYGCMVDL R G ++ + + DPV+WRTLL + +R L+ E
Sbjct: 338 QFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGE 397
Query: 62 MVAGKLLEL 70
+ KL++L
Sbjct: 398 VAMKKLVQL 406
>AT3G13770.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4519647-4521533 FORWARD
Length = 628
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAE 61
E G +P EHYGC+VD+L R G IDEA++F +P+ P + +LL A + + E
Sbjct: 386 EYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGE 445
Query: 62 MVAGKLLEL 70
V +L+E+
Sbjct: 446 SVGRRLIEI 454
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD
Length = 705
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 4 LGIEPSMEHYGCMVDLLCRGGLIDEAYDFA-LIIPTPDPVIWRTLLVAYTKNRMLQKAEM 62
G++P HY CMVD+L R G +EA + + PD +W +LL A + L AE
Sbjct: 463 FGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEF 522
Query: 63 VAGKLLEL 70
A KL+E+
Sbjct: 523 CAKKLIEI 530
>AT4G14050.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8103645-8105483 REVERSE
Length = 612
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
+ GI PS++HY C++DLL R GL+DEA + +P PD W LL A + Q
Sbjct: 368 DYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGI 427
Query: 62 MVAGKLL 68
+A L+
Sbjct: 428 RIADHLV 434
>AT1G26900.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:9319756-9321474 REVERSE
Length = 572
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 8 PSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVA 50
P +EHYGC+VDLL R G ++EAY+ +P T D WR LL A
Sbjct: 465 PKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAA 508
>AT3G08820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:2677122-2679179 REVERSE
Length = 685
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMV 63
++ ++EHYGCMVDL R G++D+AY +P P+ ++W LL + Q AE V
Sbjct: 445 ALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETV 504
Query: 64 AGKLLEL 70
+L+ L
Sbjct: 505 LKELIAL 511
>AT5G56310.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:22802322-22803914 FORWARD
Length = 530
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMV 63
GI P++EHYGCM+DLL R G + EA + +P + IW +LL A + L+ E
Sbjct: 382 GIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERA 441
Query: 64 AGKLLEL 70
+L++L
Sbjct: 442 LSELIKL 448
>AT4G14820.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:8507794-8510038 REVERSE
Length = 722
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
E I P +EHYGCMVDL R L+ EA + +P + VIW +L+ A + L+ +
Sbjct: 474 EYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGK 533
Query: 62 MVAGKLLEL 70
A ++LEL
Sbjct: 534 FAAKRILEL 542
>AT4G39952.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:18527680-18530007 FORWARD
Length = 726
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 1 MLELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLL 48
M + ++P+++HY C+VDLL R G ++EA + +P +PD VIW TLL
Sbjct: 611 MHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLL 659
>AT2G29760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:12712884-12715100 FORWARD
Length = 738
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPTPDPV-IWRTLLVAYTKNRMLQKAEMV 63
GI P +HY C+VD+L R G +++A F +P P +W LL A + L AEM
Sbjct: 497 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 556
Query: 64 AGKLLEL 70
+LLEL
Sbjct: 557 CTRLLEL 563
>AT5G13270.1 | Symbols: RARE1 | pentatricopeptide (PPR)
repeat-containing protein | chr5:4246954-4249212 REVERSE
Length = 752
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMVA 64
+ P+++HY CM+D+ R GL+DEA F +P PD + W+ L ++ L+ E+
Sbjct: 520 VAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAG 579
Query: 65 GKLLEL 70
+L +L
Sbjct: 580 EELRQL 585
>AT4G35130.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:16721084-16723498 REVERSE
Length = 804
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
E GI+P +EHYGCM+DL+ R G A F +P P IW +LL A ++ + AE
Sbjct: 561 EYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAE 620
Query: 62 MVAGKLLEL 70
A ++ ++
Sbjct: 621 FAAEQIFKM 629
>AT3G57430.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21255731-21258403 REVERSE
Length = 890
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPTP--DPVIWRTLLVAYTKNRMLQKA 60
+ G+EPS +HY C+VDLL R G I EAY ++P W +LL A + L+
Sbjct: 647 DYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIG 706
Query: 61 EMVAGKLLEL 70
E+ A L++L
Sbjct: 707 EIAAQNLIQL 716
>AT3G04750.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1301391-1303376 REVERSE
Length = 661
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFAL-IIPT-PDPVIWRTLLVAYTKNRMLQKA 60
+ G +P EHYG +VDLLCR G ++EA D +P P +W ++L A ++ A
Sbjct: 498 KFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETA 557
Query: 61 EMVAGKLLEL 70
E+ +LL+L
Sbjct: 558 ELALTELLKL 567
>AT4G30700.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:14962617-14964995 REVERSE
Length = 792
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDF--ALIIPTPDPVIWRTLLVAYTKNRMLQKAEM 62
G EPS++HY CMVD+L R G + A F A+ I P +W TLL A ++ A
Sbjct: 552 GFEPSVKHYACMVDILGRAGHLQRALQFIEAMSI-EPGSSVWETLLGACRIHKDTNLART 610
Query: 63 VAGKLLEL 70
V+ KL EL
Sbjct: 611 VSEKLFEL 618
>AT3G58590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:21666262-21668487 FORWARD
Length = 741
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 1 MLELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPTP-DPVIWRTLL 48
M + G+EP M+HY C VDLL R G + EA +P P D +WRT L
Sbjct: 673 MKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFL 721
>AT5G13230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4222514-4224982 FORWARD
Length = 822
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMV 63
GIEP +EHY CMV LL R G +D+A IP P +IWR +L A + A
Sbjct: 581 GIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRS 640
Query: 64 AGKLLEL 70
A ++L++
Sbjct: 641 AEEILKI 647
>AT3G25970.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9500116-9502056 REVERSE
Length = 646
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMVA 64
I+P MEHY VDLL R GL+++A + +P PDP++ +T L ++ A VA
Sbjct: 487 IQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVA 546
Query: 65 GKLLEL 70
LLE+
Sbjct: 547 NHLLEI 552
>AT1G56690.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:21253817-21255931 FORWARD
Length = 704
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDF-ALIIPTPDPVIWRTLLVAYTKNRMLQKAEMVA 64
+ P++EHY C VD+L R G +D+A + + PD +W LL A + L AE+ A
Sbjct: 464 VTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAA 523
Query: 65 GKLLE 69
KL E
Sbjct: 524 KKLFE 528
>AT2G41080.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:17132857-17134554 FORWARD
Length = 565
Score = 49.7 bits (117), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMV 63
G +P ++HY C+VDLL R G +D+A +P D VIW+TLL A ++ + A+ V
Sbjct: 325 GFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRV 384
Query: 64 AGKLLEL 70
++L++
Sbjct: 385 FKEILQI 391
>AT4G16835.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:9473021-9474803 FORWARD
Length = 575
Score = 49.7 bits (117), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMVA 64
+EP +HY CMVDLL R G ++EA +P P ++ TLL A ++ ++ AE A
Sbjct: 331 VEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAA 390
Query: 65 GKLLEL 70
KLL+L
Sbjct: 391 EKLLQL 396
>AT2G37320.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15667223-15668725 FORWARD
Length = 500
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 1 MLELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVA 50
M E G++P + HY C+VDLL R GL+ EA + +P P+ VIW +LL +
Sbjct: 349 MAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFS 399
>AT2G20540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:8844160-8845764 FORWARD
Length = 534
Score = 49.3 bits (116), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMVA 64
IEP +EHYGC++D+L R G ++ A + +P PD IW +LL + L A +
Sbjct: 374 IEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAM 433
Query: 65 GKLLEL 70
L+EL
Sbjct: 434 DHLVEL 439
>AT3G53360.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:19784502-19786808 FORWARD
Length = 768
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
E GI P+ EH C+VDLL R G ++EA F + PD V+W+TLL A + A+
Sbjct: 603 EHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQ 662
Query: 62 MVAGKLLEL 70
A +L++
Sbjct: 663 KAAENILKI 671
>AT3G05240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:1493684-1495381 REVERSE
Length = 548
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLL 48
G+EP++EHYGCMVD+L R G +EA +P P+ IW LL
Sbjct: 433 GLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALL 477
>AT3G63370.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:23402080-23405991 FORWARD
Length = 1017
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAE 61
E +EP EHY C+VD+L R + EA++F ++ T P +W LL A + + E
Sbjct: 680 EYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGE 739
Query: 62 MVAGKLLEL 70
+ A +LLEL
Sbjct: 740 IAAQRLLEL 748
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE
Length = 654
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVA 50
+ + P ++HY CM DLL R G +DEAYDF +P PD + TLL A
Sbjct: 540 DFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSA 588
>AT5G15340.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:4982273-4984144 REVERSE
Length = 623
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMV 63
G+EP ++HY CMVDLL R GLI+EA +P P+ V+ +LL + + + ++ AE +
Sbjct: 381 GLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERI 440
Query: 64 AGKLLEL 70
+L+++
Sbjct: 441 KRELIQM 447
>AT1G18485.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:6363172-6366084 FORWARD
Length = 970
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 4 LGIEPSMEHYGCMVDLLCRGGLIDEAYDFAL--IIPTPDPVIWRTLLVAYTKNRMLQKAE 61
G++P+++HY C++D+L R G +D+A + D IW++LL + ++ L+ E
Sbjct: 728 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 787
Query: 62 MVAGKLLEL 70
VA KL EL
Sbjct: 788 KVAAKLFEL 796
>AT5G59600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:24011315-24012919 REVERSE
Length = 534
Score = 48.9 bits (115), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMVA 64
I P +EHY CMVDLL R G + EAY+ + PD +W LL A + ++ A + A
Sbjct: 421 IVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAA 480
Query: 65 GKLLEL 70
L EL
Sbjct: 481 KHLAEL 486
>AT4G19191.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 10 growth stages; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885);
BEST Arabidopsis thaliana protein match is: CRR22
(CHLORORESPIRATORY REDUCTION22); endonuclease
(TAIR:AT1G11290.1); Has 16668 Blast hits to 5144
proteins in 160 species: Archae - 1; Bacteria - 6;
Metazoa - 71; Fungi - 62; Plants - 16190; Viruses - 0;
Other Eukaryotes - 338 (source: NCBI BLink). |
chr4:10496228-10498192 FORWARD
Length = 654
Score = 48.5 bits (114), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFAL-IIPTPDPVIWRTLLVAYTKNRMLQKAEMVA 64
I P ++HY CMVDLL R G ++EA + + PD IW LL A +R ++ AE A
Sbjct: 491 ISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAA 550
Query: 65 GKLLEL 70
L L
Sbjct: 551 ESLFNL 556
>AT5G40410.1 | Symbols: | INVOLVED IN: biological_process unknown;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT1G08070.1); Has 12213 Blast hits to 4641
proteins in 127 species: Archae - 0; Bacteria - 0;
Metazoa - 61; Fungi - 12; Plants - 12006; Viruses - 0;
Other Eukaryotes - 134 (source: NCBI BLink). |
chr5:16171385-16173211 FORWARD
Length = 608
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMVA 64
I+P ++HY CMVDLL R GL+ +AY +P P +W LL A + Q A
Sbjct: 368 IDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAA 427
Query: 65 GKLLEL 70
+L EL
Sbjct: 428 ERLFEL 433
>AT4G22760.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:11958477-11962870 FORWARD
Length = 889
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 1 MLELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQK 59
M + +EPS +HYG MVD+L R G ++EAY+ +P P+ +W LL+A + ++
Sbjct: 727 MKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEF 786
Query: 60 AEMVAGKLLEL 70
E+ ++L
Sbjct: 787 GEIACSHCVKL 797
>AT5G19020.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:6352771-6357083 REVERSE
Length = 939
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVA 50
GIEP ++HYGCMVDLL + G ++EA + +P D +IW LL A
Sbjct: 827 GIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSA 873
>AT4G14850.1 | Symbols: LOI1 | LOI1 (lovastatin insensitive 1) |
chr4:8513947-8516275 FORWARD
Length = 684
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMV 63
GIEP EHY C+VD+L R G+++ AY+F +P P +W L A + Q +
Sbjct: 444 GIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLA 503
Query: 64 AGKLLEL 70
A L +L
Sbjct: 504 AENLFKL 510
>AT1G71490.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:26933326-26935371 REVERSE
Length = 681
Score = 48.5 bits (114), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
E GI P ++H+ CMVDL R G + +A D +P P W TLL A + Q +
Sbjct: 512 EYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGK 571
Query: 62 MVAGKLLEL 70
A KLLE+
Sbjct: 572 WAAEKLLEM 580
>AT1G77170.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28998133-28999536 REVERSE
Length = 467
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
E +EP + HYGC+VDLL R G + EA +P P+ ++W L+ K ++ AE
Sbjct: 350 EFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAE 409
Query: 62 MVAGKLLEL 70
VA ++EL
Sbjct: 410 WVAPYMVEL 418
>AT1G13410.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 8 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G02750.1); Has 13539 Blast hits to 4793
proteins in 111 species: Archae - 0; Bacteria - 0;
Metazoa - 25; Fungi - 35; Plants - 13298; Viruses - 0;
Other Eukaryotes - 181 (source: NCBI BLink). |
chr1:4601526-4603174 FORWARD
Length = 474
Score = 48.5 bits (114), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAE 61
+ I P +EH GC+VDLL R G + +A +F +P D VIW TLL A + + E
Sbjct: 319 DFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGE 378
Query: 62 MVAGKLLEL 70
+ +L++L
Sbjct: 379 VALEELIKL 387
>AT3G46790.1 | Symbols: CRR2 | CRR2 (CHLORORESPIRATORY REDUCTION 2)
| chr3:17231975-17233948 REVERSE
Length = 657
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMV 63
GI+P +EHY CMVDLL R +DEA + T P P +W +LL + + ++ AE
Sbjct: 417 GIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERA 476
Query: 64 AGKLLEL 70
+ +L L
Sbjct: 477 SRRLFAL 483
>AT1G22830.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 4 LGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEM 62
GI +EHY CMVDL CR G +D+A D IP P + TLL A + E
Sbjct: 555 FGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEW 614
Query: 63 VAGKLL 68
A KLL
Sbjct: 615 AADKLL 620
>AT1G22830.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:8076921-8079032 FORWARD
Length = 703
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 4 LGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEM 62
GI +EHY CMVDL CR G +D+A D IP P + TLL A + E
Sbjct: 555 FGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEW 614
Query: 63 VAGKLL 68
A KLL
Sbjct: 615 AADKLL 620
>AT3G23330.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:8347200-8349347 FORWARD
Length = 679
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDF-ALIIPTPDPVIWRTLLVAYTKNRMLQKAEMV 63
G+ +EHY + DLL R G ++EAY+F + + P +W TLL + + ++ L+ AE V
Sbjct: 439 GLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKV 498
Query: 64 AGKLL 68
A K+
Sbjct: 499 AEKIF 503
>AT3G14730.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:4949385-4951346 REVERSE
Length = 653
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPTPD-PVIWRTLL 48
I P+ +HY C++D+L R ++EAY+ A+ P D PV+WR++L
Sbjct: 500 ILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSIL 543
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE
Length = 895
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
+ GIEP HY CMVD L R G + EA F + PD ++W TLL A + ++ +
Sbjct: 782 DYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGK 841
Query: 62 MVAGKLLEL 70
+ A K +EL
Sbjct: 842 VAAKKAIEL 850
>AT1G16480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT4G13650.1). | chr1:5625843-5628656
REVERSE
Length = 937
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAE 61
+ G+EP++EH C++DLL R G + EA F +P P+ ++WR+LL + + L +
Sbjct: 695 DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGR 754
Query: 62 MVAGKLLEL 70
A L +L
Sbjct: 755 KAAENLSKL 763
>AT5G06540.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1999181-2001049 REVERSE
Length = 622
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMV 63
GIEP +EHYGC+VD+L R G + EA +F L + P+ I LL A + + AE V
Sbjct: 381 GIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERV 440
Query: 64 AGKLLEL 70
L+++
Sbjct: 441 GNMLIKV 447
>AT1G06140.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:1864796-1866472 FORWARD
Length = 558
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 3 ELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAE 61
+ G+ P EHY CMVDLL R G I EA F +P P W LL A ++ + A
Sbjct: 442 DYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAG 501
Query: 62 MVAGKLLEL 70
+A KLL +
Sbjct: 502 EIAEKLLSM 510
>AT3G28640.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:10731518-10732723 REVERSE
Length = 401
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIP-TPDPVIWRTLLVAYTKNRMLQKAEMVA 64
I P EHY C+VDL+CR G +D+A + +P P +W LL ++ ++ E+
Sbjct: 250 ITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAV 309
Query: 65 GKLLEL 70
LL+L
Sbjct: 310 KNLLDL 315
>AT5G50390.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:20520789-20522980 REVERSE
Length = 701
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 5 GIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPTPDPV-IWRTLLVAYTKNRMLQKAEMV 63
GI+P HY CM++LL R GL+DEA F P V +W LL A L+ +V
Sbjct: 457 GIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVV 516
Query: 64 AGKL 67
A KL
Sbjct: 517 AEKL 520
>AT5G39680.1 | Symbols: EMB2744 | EMB2744 (EMBRYO DEFECTIVE 2744) |
chr5:15884236-15886368 REVERSE
Length = 710
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 1 MLELGIEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPTP-DPVIWRTLLVAYTKNRMLQK 59
M + ++P ++HY C+V LL + G+ +A DF P D V WRTLL A R +
Sbjct: 466 MKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRL 525
Query: 60 AEMVAGKLLE 69
+ VA +E
Sbjct: 526 GKKVAEYAIE 535
>AT3G25060.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:9128516-9130321 FORWARD
Length = 601
Score = 45.4 bits (106), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 6 IEPSMEHYGCMVDLLCRGGLIDEAYDFALIIPTPDPV-IWRTLLVAYTKNRMLQKAEMVA 64
I+PS +HY C++DLL R G ++EA D + + IW LL +R L ++ A
Sbjct: 450 IQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAA 509
Query: 65 GKLLEL 70
K+L+L
Sbjct: 510 NKILQL 515
>AT3G29230.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:11188803-11190605 FORWARD
Length = 600
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 8 PSMEHYGCMVDLLCRGGLIDEAYDFALIIPT-PDPVIWRTLLVAYTKNRMLQKAEMVAGK 66
P +EHYGC+VDLL R G + EA +P P+ VIW LL A + + A+ V
Sbjct: 450 PQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDN 509
Query: 67 LLEL 70
L++L
Sbjct: 510 LVKL 513