Jatropha Genome Database
- JcCB0756221.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0756221.10 + phase: 0 /partial
(382 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G48520.1 | Symbols: GATB | GATB (GLU-ADT SUBUNIT B); carbon-n... 340 1e-93
AT1G48520.2 | Symbols: GATB | GATB (GLU-ADT SUBUNIT B); carbon-n... 339 1e-93
AT1G48520.3 | Symbols: GATB | GATB (GLU-ADT SUBUNIT B); carbon-n... 339 2e-93
>AT1G48520.1 | Symbols: GATB | GATB (GLU-ADT SUBUNIT B);
carbon-nitrogen ligase, with glutamine as amido-N-donor
/ glutaminyl-tRNA synthase (glutamine-hydrolyzing)/
ligase | chr1:17940185-17942540 FORWARD
Length = 550
Score = 340 bits (871), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 159/188 (84%), Positives = 177/188 (94%)
Query: 195 FFQVDLNRAGVPLLEIVSEPDMRNGIEAAEYAAELQRMVRYLGVSNGNMQEGSLRCDVNV 254
+ QVDLNRAGVPLLEIVSEPDMR+GIEAAEYA E+QR+ RYLGVSNGNMQEGSLRCDVN+
Sbjct: 209 YSQVDLNRAGVPLLEIVSEPDMRSGIEAAEYACEMQRIARYLGVSNGNMQEGSLRCDVNI 268
Query: 255 SIRPIGQSEFGTKVEIKNLNSFSSINRAIDFEISRQVLLHSQGQVDSIVQETRLWEEGAQ 314
SIRPIGQ+EFGTKVEIKNLN+FS+I+RAIDFEISRQ LL++QG+ D IV ETRLWEEGAQ
Sbjct: 269 SIRPIGQAEFGTKVEIKNLNAFSAISRAIDFEISRQALLYNQGKADQIVTETRLWEEGAQ 328
Query: 315 KTVSMRKKEGLSDYRYFPEPDLPEVIFTKEYVDSIKNSLPDLPEIKRRRYENMGLGMQDV 374
KTV+MRKKEGL+DYRYFPEPDLPEVI T+EYVDSI+ SLP+LPE KRRRYE MGLGMQDV
Sbjct: 329 KTVTMRKKEGLADYRYFPEPDLPEVILTQEYVDSIRASLPELPEAKRRRYEAMGLGMQDV 388
Query: 375 LFLANDMS 382
LFLAND+S
Sbjct: 389 LFLANDVS 396
Score = 268 bits (684), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 117/138 (84%), Positives = 129/138 (93%)
Query: 1 YEAIIGIETHVQLSTLTKAFCSCPYNYGAQPNSSICPICMGLPGALPVLNSKVIEFAVKL 60
YEA+IGIETHVQLSTLTKAFCSC NYG+ PN+SICP+CMGLPGALPVLNSKV+EF V+L
Sbjct: 70 YEAVIGIETHVQLSTLTKAFCSCSNNYGSYPNTSICPVCMGLPGALPVLNSKVVEFGVRL 129
Query: 61 GLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFDIPIGTGGYIDLDLPMEFGGGHRRFGI 120
GLALNC LSL SKFDRKQYFYPDLPKGYQISQFDIPI +GGY+D+D+P+EFGGGHRRFGI
Sbjct: 130 GLALNCDLSLKSKFDRKQYFYPDLPKGYQISQFDIPIASGGYVDVDIPLEFGGGHRRFGI 189
Query: 121 TRLHMEEDAGKLLHSGNG 138
TR+HMEEDAGKLLHS G
Sbjct: 190 TRVHMEEDAGKLLHSDTG 207
>AT1G48520.2 | Symbols: GATB | GATB (GLU-ADT SUBUNIT B);
carbon-nitrogen ligase, with glutamine as amido-N-donor
/ glutaminyl-tRNA synthase (glutamine-hydrolyzing)/
ligase | chr1:17940185-17942075 FORWARD
Length = 475
Score = 339 bits (870), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 159/188 (84%), Positives = 177/188 (94%)
Query: 195 FFQVDLNRAGVPLLEIVSEPDMRNGIEAAEYAAELQRMVRYLGVSNGNMQEGSLRCDVNV 254
+ QVDLNRAGVPLLEIVSEPDMR+GIEAAEYA E+QR+ RYLGVSNGNMQEGSLRCDVN+
Sbjct: 209 YSQVDLNRAGVPLLEIVSEPDMRSGIEAAEYACEMQRIARYLGVSNGNMQEGSLRCDVNI 268
Query: 255 SIRPIGQSEFGTKVEIKNLNSFSSINRAIDFEISRQVLLHSQGQVDSIVQETRLWEEGAQ 314
SIRPIGQ+EFGTKVEIKNLN+FS+I+RAIDFEISRQ LL++QG+ D IV ETRLWEEGAQ
Sbjct: 269 SIRPIGQAEFGTKVEIKNLNAFSAISRAIDFEISRQALLYNQGKADQIVTETRLWEEGAQ 328
Query: 315 KTVSMRKKEGLSDYRYFPEPDLPEVIFTKEYVDSIKNSLPDLPEIKRRRYENMGLGMQDV 374
KTV+MRKKEGL+DYRYFPEPDLPEVI T+EYVDSI+ SLP+LPE KRRRYE MGLGMQDV
Sbjct: 329 KTVTMRKKEGLADYRYFPEPDLPEVILTQEYVDSIRASLPELPEAKRRRYEAMGLGMQDV 388
Query: 375 LFLANDMS 382
LFLAND+S
Sbjct: 389 LFLANDVS 396
Score = 267 bits (683), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 117/138 (84%), Positives = 129/138 (93%)
Query: 1 YEAIIGIETHVQLSTLTKAFCSCPYNYGAQPNSSICPICMGLPGALPVLNSKVIEFAVKL 60
YEA+IGIETHVQLSTLTKAFCSC NYG+ PN+SICP+CMGLPGALPVLNSKV+EF V+L
Sbjct: 70 YEAVIGIETHVQLSTLTKAFCSCSNNYGSYPNTSICPVCMGLPGALPVLNSKVVEFGVRL 129
Query: 61 GLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFDIPIGTGGYIDLDLPMEFGGGHRRFGI 120
GLALNC LSL SKFDRKQYFYPDLPKGYQISQFDIPI +GGY+D+D+P+EFGGGHRRFGI
Sbjct: 130 GLALNCDLSLKSKFDRKQYFYPDLPKGYQISQFDIPIASGGYVDVDIPLEFGGGHRRFGI 189
Query: 121 TRLHMEEDAGKLLHSGNG 138
TR+HMEEDAGKLLHS G
Sbjct: 190 TRVHMEEDAGKLLHSDTG 207
>AT1G48520.3 | Symbols: GATB | GATB (GLU-ADT SUBUNIT B);
carbon-nitrogen ligase, with glutamine as amido-N-donor
/ glutaminyl-tRNA synthase (glutamine-hydrolyzing)/
ligase | chr1:17940185-17942272 FORWARD
Length = 488
Score = 339 bits (870), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 159/188 (84%), Positives = 177/188 (94%)
Query: 195 FFQVDLNRAGVPLLEIVSEPDMRNGIEAAEYAAELQRMVRYLGVSNGNMQEGSLRCDVNV 254
+ QVDLNRAGVPLLEIVSEPDMR+GIEAAEYA E+QR+ RYLGVSNGNMQEGSLRCDVN+
Sbjct: 209 YSQVDLNRAGVPLLEIVSEPDMRSGIEAAEYACEMQRIARYLGVSNGNMQEGSLRCDVNI 268
Query: 255 SIRPIGQSEFGTKVEIKNLNSFSSINRAIDFEISRQVLLHSQGQVDSIVQETRLWEEGAQ 314
SIRPIGQ+EFGTKVEIKNLN+FS+I+RAIDFEISRQ LL++QG+ D IV ETRLWEEGAQ
Sbjct: 269 SIRPIGQAEFGTKVEIKNLNAFSAISRAIDFEISRQALLYNQGKADQIVTETRLWEEGAQ 328
Query: 315 KTVSMRKKEGLSDYRYFPEPDLPEVIFTKEYVDSIKNSLPDLPEIKRRRYENMGLGMQDV 374
KTV+MRKKEGL+DYRYFPEPDLPEVI T+EYVDSI+ SLP+LPE KRRRYE MGLGMQDV
Sbjct: 329 KTVTMRKKEGLADYRYFPEPDLPEVILTQEYVDSIRASLPELPEAKRRRYEAMGLGMQDV 388
Query: 375 LFLANDMS 382
LFLAND+S
Sbjct: 389 LFLANDVS 396
Score = 267 bits (683), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 117/138 (84%), Positives = 129/138 (93%)
Query: 1 YEAIIGIETHVQLSTLTKAFCSCPYNYGAQPNSSICPICMGLPGALPVLNSKVIEFAVKL 60
YEA+IGIETHVQLSTLTKAFCSC NYG+ PN+SICP+CMGLPGALPVLNSKV+EF V+L
Sbjct: 70 YEAVIGIETHVQLSTLTKAFCSCSNNYGSYPNTSICPVCMGLPGALPVLNSKVVEFGVRL 129
Query: 61 GLALNCKLSLNSKFDRKQYFYPDLPKGYQISQFDIPIGTGGYIDLDLPMEFGGGHRRFGI 120
GLALNC LSL SKFDRKQYFYPDLPKGYQISQFDIPI +GGY+D+D+P+EFGGGHRRFGI
Sbjct: 130 GLALNCDLSLKSKFDRKQYFYPDLPKGYQISQFDIPIASGGYVDVDIPLEFGGGHRRFGI 189
Query: 121 TRLHMEEDAGKLLHSGNG 138
TR+HMEEDAGKLLHS G
Sbjct: 190 TRVHMEEDAGKLLHSDTG 207