Jatropha Genome Database
- JcCB0747431.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0747431.10 + phase: 0
(204 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G03840.1 | Symbols: MGP | MGP (Magpie); nucleic acid binding ... 263 4e-71
AT5G44160.1 | Symbols: NUC | NUC (nutcracker); nucleic acid bind... 257 3e-69
AT3G50700.1 | Symbols: AtIDD2 | AtIDD2 (Arabidopsis thaliana Ind... 256 8e-69
AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein... 255 1e-68
AT1G03840.2 | Symbols: MGP | MGP (Magpie); nucleic acid binding ... 254 3e-68
AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein... 249 6e-67
AT3G13810.1 | Symbols: AtIDD11 | AtIDD11 (Arabidopsis thaliana I... 249 8e-67
AT2G02080.1 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana Ind... 248 2e-66
AT1G55110.1 | Symbols: AtIDD7 | AtIDD7 (Arabidopsis thaliana Ind... 248 3e-66
AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein... 245 1e-65
AT4G02670.1 | Symbols: AtIDD12 | AtIDD12 (Arabidopsis thaliana I... 242 1e-64
AT2G02070.1 | Symbols: AtIDD5 | AtIDD5 (Arabidopsis thaliana Ind... 240 4e-64
AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding... 238 2e-63
AT5G60470.1 | Symbols: | nucleic acid binding / transcription f... 213 6e-56
AT2G02080.2 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana Ind... 208 2e-54
AT1G68130.1 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana I... 199 7e-52
AT2G01940.1 | Symbols: SGR5, ATIDD15 | nucleic acid binding / tr... 196 9e-51
AT2G01940.3 | Symbols: SGR5, ATIDD15 | nucleic acid binding / tr... 192 2e-49
AT1G25250.1 | Symbols: AtIDD16 | AtIDD16 (Arabidopsis thaliana I... 185 1e-47
AT1G68130.2 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana I... 128 3e-30
AT2G01940.2 | Symbols: SGR5, ATIDD15 | nucleic acid binding / tr... 125 2e-29
AT1G34370.3 | Symbols: STOP1 | STOP1 (sensitive to proton rhizot... 74 4e-14
AT1G34370.1 | Symbols: STOP1 | STOP1 (sensitive to proton rhizot... 74 5e-14
AT1G34370.2 | Symbols: STOP1 | STOP1 (sensitive to proton rhizot... 74 5e-14
AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein... 73 1e-13
AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4)... 69 2e-12
AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5)... 69 2e-12
AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT); nuclei... 66 2e-11
AT1G13290.1 | Symbols: DOT5 | DOT5 (DEFECTIVELY ORGANIZED TRIBUT... 63 1e-10
AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3)... 63 1e-10
AT1G34790.1 | Symbols: TT1 | TT1 (transparent testa 1); transcri... 62 3e-10
>AT1G03840.1 | Symbols: MGP | MGP (Magpie); nucleic acid binding /
protein binding / transcription factor/ zinc ion binding
| chr1:967596-970058 REVERSE
Length = 506
Score = 263 bits (673), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 121/144 (84%), Positives = 127/144 (88%)
Query: 54 VKKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLK 113
VKKKRNLPGNPDP AEVIALSP TL+ATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKLK
Sbjct: 40 VKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLK 99
Query: 114 QRTSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQS 173
QRTS E+RKRVYVCPE SCVHH+P RALGDLTGIKKHFCRKHGE YAVQS
Sbjct: 100 QRTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQS 159
Query: 174 DWKAHSKTCGTKEYKCDCGTIFSR 197
DWKAHSKTCGT+EY+CDCGTIFSR
Sbjct: 160 DWKAHSKTCGTREYRCDCGTIFSR 183
>AT5G44160.1 | Symbols: NUC | NUC (nutcracker); nucleic acid binding
/ transcription factor/ zinc ion binding |
chr5:17773091-17775513 FORWARD
Length = 466
Score = 257 bits (657), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 118/144 (81%), Positives = 127/144 (88%)
Query: 54 VKKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLK 113
VKKKRNLPGNPDP AEVIALSP TL+ATNRF+CE+C KGFQRDQNLQLHRRGHNLPWKLK
Sbjct: 36 VKKKRNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLK 95
Query: 114 QRTSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQS 173
QRTS E+RKRVYVCPE +CVHH+ +RALGDLTGIKKHFCRKHGE YAVQS
Sbjct: 96 QRTSKEVRKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQS 155
Query: 174 DWKAHSKTCGTKEYKCDCGTIFSR 197
DWKAHSKTCGT+EY+CDCGTIFSR
Sbjct: 156 DWKAHSKTCGTREYRCDCGTIFSR 179
>AT3G50700.1 | Symbols: AtIDD2 | AtIDD2 (Arabidopsis thaliana
Indeterminate(ID)-Domain 2); nucleic acid binding /
transcription factor/ zinc ion binding |
chr3:18840945-18842829 FORWARD
Length = 452
Score = 256 bits (653), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 115/143 (80%), Positives = 126/143 (88%)
Query: 55 KKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 114
KKKRNLPG PDP +EVIALSP TLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL+Q
Sbjct: 34 KKKRNLPGMPDPESEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ 93
Query: 115 RTSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQSD 174
+++ E++K+VYVCPE SCVHH+P+RALGDLTGIKKHFCRKHGE YAVQSD
Sbjct: 94 KSNKEVKKKVYVCPEVSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD 153
Query: 175 WKAHSKTCGTKEYKCDCGTIFSR 197
WKAHSK CGTKEYKCDCGT+FSR
Sbjct: 154 WKAHSKICGTKEYKCDCGTLFSR 176
>AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:26641914-26643883 REVERSE
Length = 500
Score = 255 bits (652), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 115/143 (80%), Positives = 124/143 (86%)
Query: 55 KKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 114
KKKRNLPG PDP AEVIALSP TL+ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL+Q
Sbjct: 32 KKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ 91
Query: 115 RTSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQSD 174
R++ E+RK+VYVCP CVHH+P+RALGDLTGIKKHFCRKHGE YAVQSD
Sbjct: 92 RSTKEVRKKVYVCPVSGCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSD 151
Query: 175 WKAHSKTCGTKEYKCDCGTIFSR 197
WKAHSK CGTKEYKCDCGT+FSR
Sbjct: 152 WKAHSKICGTKEYKCDCGTLFSR 174
>AT1G03840.2 | Symbols: MGP | MGP (Magpie); nucleic acid binding /
protein binding / transcription factor/ zinc ion binding
| chr1:967596-970058 REVERSE
Length = 504
Score = 254 bits (649), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 119/144 (82%), Positives = 126/144 (87%), Gaps = 2/144 (1%)
Query: 54 VKKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLK 113
VKKKRNLPGNP+ AEVIALSP TL+ATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKLK
Sbjct: 40 VKKKRNLPGNPE--AEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLK 97
Query: 114 QRTSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQS 173
QRTS E+RKRVYVCPE SCVHH+P RALGDLTGIKKHFCRKHGE YAVQS
Sbjct: 98 QRTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQS 157
Query: 174 DWKAHSKTCGTKEYKCDCGTIFSR 197
DWKAHSKTCGT+EY+CDCGTIFSR
Sbjct: 158 DWKAHSKTCGTREYRCDCGTIFSR 181
>AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr1:4990070-4992442 FORWARD
Length = 467
Score = 249 bits (637), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 111/145 (76%), Positives = 128/145 (88%)
Query: 53 PVKKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 112
P KK+RN PGNP+P AEVIALSP T++ATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKL
Sbjct: 51 PPKKRRNQPGNPNPDAEVIALSPKTIMATNRFLCEVCNKGFQREQNLQLHRRGHNLPWKL 110
Query: 113 KQRTSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQ 172
KQ+++ E+R++VY+CPEPSCVHH+PARALGDLTGIKKH+ RKHGE YAVQ
Sbjct: 111 KQKSNKEVRRKVYLCPEPSCVHHDPARALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQ 170
Query: 173 SDWKAHSKTCGTKEYKCDCGTIFSR 197
SDWKAHSKTCGTKEY+CDCGTIFSR
Sbjct: 171 SDWKAHSKTCGTKEYRCDCGTIFSR 195
>AT3G13810.1 | Symbols: AtIDD11 | AtIDD11 (Arabidopsis thaliana
Indeterminate(ID)-Domain 11); nucleic acid binding /
transcription factor/ zinc ion binding |
chr3:4544941-4547300 FORWARD
Length = 513
Score = 249 bits (636), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 117/147 (79%), Positives = 127/147 (86%), Gaps = 1/147 (0%)
Query: 52 QPVKKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK 111
Q KK+RN PGNPDP +EVIALSP TL+ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK
Sbjct: 67 QTQKKRRNQPGNPDPESEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK 126
Query: 112 LKQRTSTE-IRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXYA 170
LKQR++ E IRK+VYVCPE SCVHH+P+RALGDLTGIKKHFCRKHGE YA
Sbjct: 127 LKQRSNKEVIRKKVYVCPEASCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYA 186
Query: 171 VQSDWKAHSKTCGTKEYKCDCGTIFSR 197
VQSD KAHSKTCGTKEY+CDCGT+FSR
Sbjct: 187 VQSDCKAHSKTCGTKEYRCDCGTLFSR 213
>AT2G02080.1 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana
Indeterminate(ID)-Domain 4); transcription factor |
chr2:518328-521170 REVERSE
Length = 516
Score = 248 bits (633), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 107/145 (73%), Positives = 128/145 (88%)
Query: 53 PVKKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL 112
P KK+RN PGNP+P AEV+ALSP TL+ATNRF+C++CNKGFQR+QNLQLHRRGHNLPWKL
Sbjct: 52 PPKKRRNQPGNPNPDAEVVALSPKTLMATNRFICDVCNKGFQREQNLQLHRRGHNLPWKL 111
Query: 113 KQRTSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQ 172
KQ+++ E++++VY+CPEP+CVHH+P+RALGDLTGIKKH+ RKHGE YAVQ
Sbjct: 112 KQKSTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQ 171
Query: 173 SDWKAHSKTCGTKEYKCDCGTIFSR 197
SDWKAHSKTCGTKEY+CDCGTIFSR
Sbjct: 172 SDWKAHSKTCGTKEYRCDCGTIFSR 196
>AT1G55110.1 | Symbols: AtIDD7 | AtIDD7 (Arabidopsis thaliana
Indeterminate(ID)-Domain 7); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:20560406-20562625 REVERSE
Length = 455
Score = 248 bits (632), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 112/148 (75%), Positives = 128/148 (86%), Gaps = 1/148 (0%)
Query: 51 QQPVKKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPW 110
Q +K+KRN PGNPDP AEV+ALSP TL+ATNRF+CE+CNKGFQRDQNLQLH+RGHNLPW
Sbjct: 59 QSSLKRKRNQPGNPDPEAEVMALSPKTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLPW 118
Query: 111 KLKQRTSTEI-RKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXY 169
KLKQR++ ++ RK+VYVCPEP CVHH+P+RALGDLTGIKKHF RKHGE Y
Sbjct: 119 KLKQRSNKDVVRKKVYVCPEPGCVHHHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKY 178
Query: 170 AVQSDWKAHSKTCGTKEYKCDCGTIFSR 197
AVQSDWKAH+KTCGTKEYKCDCGT+FSR
Sbjct: 179 AVQSDWKAHAKTCGTKEYKCDCGTLFSR 206
>AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr3:16596850-16598550 REVERSE
Length = 446
Score = 245 bits (625), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 110/145 (75%), Positives = 125/145 (86%), Gaps = 1/145 (0%)
Query: 54 VKKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLK 113
K+KRNLPGNPDP AEVIALSPN+L+ TNRF+CE+CNKGF+RDQNLQLHRRGHNLPWKLK
Sbjct: 38 AKRKRNLPGNPDPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLK 97
Query: 114 QRTSTE-IRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQ 172
QRT+ E ++K+VY+CPE +CVHH+PARALGDLTGIKKHF RKHGE YAV
Sbjct: 98 QRTNKEQVKKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVM 157
Query: 173 SDWKAHSKTCGTKEYKCDCGTIFSR 197
SDWKAHSK CGTKEY+CDCGT+FSR
Sbjct: 158 SDWKAHSKICGTKEYRCDCGTLFSR 182
>AT4G02670.1 | Symbols: AtIDD12 | AtIDD12 (Arabidopsis thaliana
Indeterminate(ID)-Domain 12); nucleic acid binding /
transcription factor/ zinc ion binding |
chr4:1176190-1178489 REVERSE
Length = 402
Score = 242 bits (617), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 111/144 (77%), Positives = 123/144 (85%), Gaps = 1/144 (0%)
Query: 55 KKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 114
KKKR LPGNPDP AEVIALSP TLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ
Sbjct: 53 KKKRGLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 112
Query: 115 RTSTEI-RKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQS 173
+ + E +K+VYVCPE +C HH+P+RALGDLTGIKKHFCRKHGE YAVQS
Sbjct: 113 KNTKEQQKKKVYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQS 172
Query: 174 DWKAHSKTCGTKEYKCDCGTIFSR 197
DWKAH+K CGT++Y+CDCGT+FSR
Sbjct: 173 DWKAHTKICGTRDYRCDCGTLFSR 196
>AT2G02070.1 | Symbols: AtIDD5 | AtIDD5 (Arabidopsis thaliana
Indeterminate(ID)-Domain 5); nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:505523-509154 FORWARD
Length = 602
Score = 240 bits (613), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 106/143 (74%), Positives = 124/143 (86%)
Query: 55 KKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 114
KKKRN P P+ AEVIALSP TL+ATNRF+CE+CNKGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 52 KKKRNQPRTPNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 111
Query: 115 RTSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQSD 174
+++ E++++VY+CPEPSCVHH+P+RALGDLTGIKKH+ RKHGE YAVQSD
Sbjct: 112 KSTKEVKRKVYLCPEPSCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSD 171
Query: 175 WKAHSKTCGTKEYKCDCGTIFSR 197
WKAHSKTCGTKEY+CDCGT+FSR
Sbjct: 172 WKAHSKTCGTKEYRCDCGTLFSR 194
>AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding /
protein binding / protein homodimerization/
transcription factor/ zinc ion binding |
chr5:745849-748678 FORWARD
Length = 503
Score = 238 bits (608), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 109/145 (75%), Positives = 122/145 (84%), Gaps = 1/145 (0%)
Query: 54 VKKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLK 113
KKKRN PG PDP A+VIALSP TL+ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLK
Sbjct: 52 AKKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLK 111
Query: 114 QRTSTE-IRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQ 172
QR+ E I+K+VY+CP +CVHH+ +RALGDLTGIKKH+ RKHGE YAVQ
Sbjct: 112 QRSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQ 171
Query: 173 SDWKAHSKTCGTKEYKCDCGTIFSR 197
SDWKAH+KTCGT+EYKCDCGT+FSR
Sbjct: 172 SDWKAHAKTCGTREYKCDCGTLFSR 196
>AT5G60470.1 | Symbols: | nucleic acid binding / transcription
factor/ zinc ion binding | chr5:24320614-24322790
FORWARD
Length = 450
Score = 213 bits (543), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 94/133 (70%), Positives = 114/133 (85%), Gaps = 1/133 (0%)
Query: 66 PSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTS-TEIRKRV 124
P+AEVI+LSP +L+ATNRF CEICNKGFQR+QNLQLH+RGHNLPWKLKQ+T+ +++K+V
Sbjct: 46 PNAEVISLSPKSLMATNRFFCEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQVKKKV 105
Query: 125 YVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGT 184
Y+CPE SCVHH+PARALGDLTGIKKHF RKHGE YAV SDWKAH+K CG+
Sbjct: 106 YICPEKSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKICGS 165
Query: 185 KEYKCDCGTIFSR 197
+E++CDCGT+FSR
Sbjct: 166 REFRCDCGTLFSR 178
>AT2G02080.2 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana
Indeterminate(ID)-Domain 4); transcription factor |
chr2:518328-520619 REVERSE
Length = 439
Score = 208 bits (530), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 88/119 (73%), Positives = 106/119 (89%)
Query: 79 LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSTEIRKRVYVCPEPSCVHHNPA 138
+ATNRF+C++CNKGFQR+QNLQLHRRGHNLPWKLKQ+++ E++++VY+CPEP+CVHH+P+
Sbjct: 1 MATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPS 60
Query: 139 RALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTKEYKCDCGTIFSR 197
RALGDLTGIKKH+ RKHGE YAVQSDWKAHSKTCGTKEY+CDCGTIFSR
Sbjct: 61 RALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSR 119
>AT1G68130.1 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana
Indeterminate(ID)-Domain 14); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:25532484-25534317 FORWARD
Length = 419
Score = 199 bits (507), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 93/146 (63%), Positives = 111/146 (76%), Gaps = 2/146 (1%)
Query: 55 KKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK-LK 113
K+KR G PDP AEV++LSP TLL ++R+VCEICN+GFQRDQNLQ+HRR H +PWK LK
Sbjct: 41 KRKRRPAGTPDPEAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 100
Query: 114 QRTSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXXX-XXXXXXXXYAVQ 172
+ T+ E+RKRVYVCPEP+C+HHNP ALGDL GIKKHF RKH YAVQ
Sbjct: 101 RETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWICERCSKGYAVQ 160
Query: 173 SDWKAHSKTCGTKEYKCDCGTIFSRF 198
SD+KAH KTCGT+ + CDCG +FSR
Sbjct: 161 SDYKAHLKTCGTRGHSCDCGRVFSRV 186
>AT2G01940.1 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:432652-434917 FORWARD
Length = 445
Score = 196 bits (498), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 90/146 (61%), Positives = 110/146 (75%), Gaps = 2/146 (1%)
Query: 55 KKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 114
K+KR G PDP AEV++LSP TLL ++R++CEICN+GFQRDQNLQ+HRR H +PWKL +
Sbjct: 44 KRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLK 103
Query: 115 R-TSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXXX-XXXXXXXXYAVQ 172
R + E++KRVYVCPEP+C+HHNP ALGDL GIKKHF RKH YAVQ
Sbjct: 104 RDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQ 163
Query: 173 SDWKAHSKTCGTKEYKCDCGTIFSRF 198
SD+KAH KTCGT+ + CDCG +FSR
Sbjct: 164 SDYKAHLKTCGTRGHSCDCGRVFSRV 189
>AT2G01940.3 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:432652-434917 FORWARD
Length = 446
Score = 192 bits (487), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/152 (59%), Positives = 111/152 (73%), Gaps = 3/152 (1%)
Query: 55 KKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK-LK 113
K+KR G PDP AEV++LSP TLL ++R++CEICN+GFQRDQNLQ+HRR H +PWK LK
Sbjct: 44 KRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLK 103
Query: 114 QRTSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXXX-XXXXXXXXYAVQ 172
+ + E++KRVYVCPEP+C+HHNP ALGDL GIKKHF RKH YAVQ
Sbjct: 104 RDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQ 163
Query: 173 SDWKAHSKTCGTKEYKCDCGTIFSRFLLIFLI 204
SD+KAH KTCGT+ + CDCG FS F + I
Sbjct: 164 SDYKAHLKTCGTRGHSCDCG-FFSSFRVESFI 194
>AT1G25250.1 | Symbols: AtIDD16 | AtIDD16 (Arabidopsis thaliana
Indeterminate(ID)-Domain 16); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:8849549-8851520 FORWARD
Length = 362
Score = 185 bits (470), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/151 (58%), Positives = 111/151 (73%), Gaps = 5/151 (3%)
Query: 52 QPVKKKRNLPGN--PDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLP 109
QP+++ + G+ DP AEV++LSP TLL ++R+VCEICN+GFQRDQNLQ+HRR H +P
Sbjct: 5 QPIRENGDPQGHQLTDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVP 64
Query: 110 WKLKQRT--STEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHG-EXXXXXXXXX 166
WKL +R E+RKRVYVCPEP+C+HH+P ALGDL GIKKHF RKH
Sbjct: 65 WKLLKRDKKDEEVRKRVYVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSVHKQWVCERCS 124
Query: 167 XXYAVQSDWKAHSKTCGTKEYKCDCGTIFSR 197
YAVQSD+KAH KTCG++ + CDCG +FSR
Sbjct: 125 KGYAVQSDYKAHLKTCGSRGHSCDCGRVFSR 155
>AT1G68130.2 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana
Indeterminate(ID)-Domain 14); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:25532843-25534317 FORWARD
Length = 333
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
Query: 101 LHRRGHNLPWKL-KQRTSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXX 159
+HRR H +PWKL K+ T+ E+RKRVYVCPEP+C+HHNP ALGDL GIKKHF RKH
Sbjct: 1 MHRRRHKVPWKLLKRETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60
Query: 160 X-XXXXXXXXYAVQSDWKAHSKTCGTKEYKCDCGTIFSRF 198
YAVQSD+KAH KTCGT+ + CDCG +FSR
Sbjct: 61 QWICERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRV 100
>AT2G01940.2 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:433232-434917 FORWARD
Length = 356
Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 71/100 (71%), Gaps = 2/100 (2%)
Query: 101 LHRRGHNLPWKLKQR-TSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEXX 159
+HRR H +PWKL +R + E++KRVYVCPEP+C+HHNP ALGDL GIKKHF RKH
Sbjct: 1 MHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60
Query: 160 X-XXXXXXXXYAVQSDWKAHSKTCGTKEYKCDCGTIFSRF 198
YAVQSD+KAH KTCGT+ + CDCG +FSR
Sbjct: 61 QWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRV 100
>AT1G34370.3 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12551449-12552501
FORWARD
Length = 350
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 51 QQPVKKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPW 110
+ V++ NLP S E++ L +LA + C IC KGF+RD NL++H RGH +
Sbjct: 65 EDDVEEGENLPPG---SYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEY 121
Query: 111 KLKQRTSTEIRKRV----------YVCPEPSC---VHHNPARALGDLTGIKKHFCRKHGE 157
K + ++ V Y CP C H + L + +K H+ R H +
Sbjct: 122 KTAAALAKPNKESVPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCD 181
Query: 158 XXXX-XXXXXXXYAVQSDWKAHSKTCGTKEYKCDCGTIFSRFLLIF 202
++V +D K H K CG ++ C CGT FSR +F
Sbjct: 182 KSFTCSRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLF 227
>AT1G34370.1 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12551002-12552501
FORWARD
Length = 499
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 51 QQPVKKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPW 110
+ V++ NLP S E++ L +LA + C IC KGF+RD NL++H RGH +
Sbjct: 214 EDDVEEGENLPPG---SYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEY 270
Query: 111 KLKQRTSTEIRKRV----------YVCPEPSC---VHHNPARALGDLTGIKKHFCRKHGE 157
K + ++ V Y CP C H + L + +K H+ R H +
Sbjct: 271 KTAAALAKPNKESVPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCD 330
Query: 158 XXXX-XXXXXXXYAVQSDWKAHSKTCGTKEYKCDCGTIFSRFLLIF 202
++V +D K H K CG ++ C CGT FSR +F
Sbjct: 331 KSFTCSRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLF 376
>AT1G34370.2 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12551002-12552501
FORWARD
Length = 499
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 51 QQPVKKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPW 110
+ V++ NLP S E++ L +LA + C IC KGF+RD NL++H RGH +
Sbjct: 214 EDDVEEGENLPPG---SYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEY 270
Query: 111 KLKQRTSTEIRKRV----------YVCPEPSC---VHHNPARALGDLTGIKKHFCRKHGE 157
K + ++ V Y CP C H + L + +K H+ R H +
Sbjct: 271 KTAAALAKPNKESVPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCD 330
Query: 158 XXXX-XXXXXXXYAVQSDWKAHSKTCGTKEYKCDCGTIFSRFLLIF 202
++V +D K H K CG ++ C CGT FSR +F
Sbjct: 331 KSFTCSRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLF 376
>AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:7653541-7654662 REVERSE
Length = 373
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 55 KKKRNLPGNPDPSAEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 114
KK ++ S +++ L LLA C+IC KGF+RD NL++H R H +K ++
Sbjct: 188 KKDKHRSKPSSGSYDILELDVADLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKTRE 247
Query: 115 ----------RTSTEIRKRVYVCPEPSC---VHHNPARALGDLTGIKKHFCRKH-GEXXX 160
+ ++K Y CP+ C H + L + K H+ R H +
Sbjct: 248 ALISPTSQDKKGGYSLKKHYYSCPQHGCRWNQRHEKFQPLKSVICAKNHYKRSHCPKMYM 307
Query: 161 XXXXXXXXYAVQSDWKAHSKTCGTKEYKCDCGTIFSR 197
++V SD + H K CG ++ C CGT FSR
Sbjct: 308 CRRCSVKHFSVLSDLRTHEKHCGDIKWVCSCGTKFSR 344
>AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4) |
chr3:7313759-7315792 REVERSE
Length = 412
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 78 LLATNRFVCEICNKGFQRDQNLQLHRRGHNL-----PWKLKQRTSTEIRKRVYVCPEPSC 132
L+ +F C +C K F R N+Q+H GH P L+ T + K C P C
Sbjct: 250 LMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAPGC 309
Query: 133 ---VHHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTKEYKC 189
+ H AR L D ++ H+ RKHG +AV+ DW+ H K CG K + C
Sbjct: 310 KNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCG-KLWYC 368
Query: 190 DCGTIF 195
CG+ F
Sbjct: 369 SCGSDF 374
>AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5) |
chr1:18989925-18992034 REVERSE
Length = 337
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 78 LLATNRFVCEICNKGFQRDQNLQLHRRGHNL-----PWKLKQRTSTEIRKRVYVCPEPSC 132
L+ +F C +C K F R N+Q+H GH P L+ T + + C P C
Sbjct: 172 LIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCFCCAPGC 231
Query: 133 ---VHHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTKEYKC 189
+ H A+ L D ++ H+ RKHG +AV+ DW+ H K CG K + C
Sbjct: 232 KNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCG-KLWYC 290
Query: 190 DCGTIF 195
CG+ F
Sbjct: 291 SCGSDF 296
>AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT); nucleic
acid binding / transcription factor/ zinc ion binding |
chr3:21370936-21373121 FORWARD
Length = 383
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 9/133 (6%)
Query: 71 IALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNL-----PWKLKQRTSTEIRKRVY 125
I L+ +F C +C K F R N+Q+H GH P L+ T + +
Sbjct: 204 IPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPC 263
Query: 126 VCPEPSC---VHHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQSDWKAHSKTC 182
C P C + H A+ L D ++ H+ RKHG +AV+ DW+ H K C
Sbjct: 264 YCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNC 323
Query: 183 GTKEYKCDCGTIF 195
G K + C CG+ F
Sbjct: 324 G-KLWYCICGSDF 335
>AT1G13290.1 | Symbols: DOT5 | DOT5 (DEFECTIVELY ORGANIZED
TRIBUTARIES 5); transcription factor |
chr1:4550366-4551527 REVERSE
Length = 302
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 78 LLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL-------KQRTSTEIRKRVYVCPE- 129
L+ +F C +CNK F R N+Q+H GH ++ + +S+ +R Y C E
Sbjct: 95 LVGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAEG 154
Query: 130 -PSCVHHNPARALGDLTGIKKHFCRKHGEXXXX-XXXXXXXYAVQSDWKAHSKTCGTKEY 187
+ + H ++ L D ++ H+ RKHG +AV+ DW+ H K CG K +
Sbjct: 155 CKNNIDHPRSKPLKDFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCG-KLW 213
Query: 188 KCDCGTIF 195
C CG+ F
Sbjct: 214 FCVCGSDF 221
>AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3) |
chr1:2610680-2613180 REVERSE
Length = 337
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 83 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRT-------STEIRKRVYVCPE--PSCV 133
+F C IC+K F R N+Q+H GH ++ + + +R Y C E + +
Sbjct: 179 QFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAEGCKNNI 238
Query: 134 HHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQSDWKAHSKTCGTKEYKCDCGT 193
+H ++ L D ++ H+ RKHG AV+ DW+ H K CG K + C CG+
Sbjct: 239 NHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNCG-KLWYCTCGS 297
Query: 194 IF 195
F
Sbjct: 298 DF 299
>AT1G34790.1 | Symbols: TT1 | TT1 (transparent testa 1);
transcription factor | chr1:12763953-12765489 FORWARD
Length = 303
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 58/136 (42%), Gaps = 9/136 (6%)
Query: 68 AEVIALSPNTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSTEIRKRV--- 124
A I L+ F C +C K F R NLQ+H GH ++ + + R
Sbjct: 129 AYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLG 188
Query: 125 ---YVCPEP--SCVHHNPARALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQSDWKAHS 179
Y C E + + H ++ L D ++ H+ RKHG AV+ DW+ H
Sbjct: 189 IPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHE 248
Query: 180 KTCGTKEYKCDCGTIF 195
K CG K + C CG+ F
Sbjct: 249 KNCG-KRWVCVCGSDF 263