Jatropha Genome Database

JcCB0747201.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0747201.10 - phase: 2 /partial
         (109 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23100.1 | Symbols: RML1, PAD2, GSH1, CAD2, ATECS1, GSHA | GS...   207   8e-55
AT4G23100.2 | Symbols: RML1, PAD2, GSH1, CAD2 | GSH1 (GLUTAMATE-...   207   1e-54

>AT4G23100.1 | Symbols: RML1, PAD2, GSH1, CAD2, ATECS1, GSHA | GSH1
           (GLUTAMATE-CYSTEINE LIGASE); glutamate-cysteine ligase |
           chr4:12103458-12106751 REVERSE
          Length = 522

 Score =  207 bits (528), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 93/110 (84%), Positives = 101/110 (91%), Gaps = 2/110 (1%)

Query: 1   FEQYVDYALDVPMYFVYRKKKYIDCTGMTFRDFMAGKLPCIPGELPTLNDWENHLTTIFP 60
           FEQYVDYALDVPMYF YRK KYIDCTGMTFR F+AGKLPC+PGELP+ NDWENHLTTIFP
Sbjct: 325 FEQYVDYALDVPMYFAYRKNKYIDCTGMTFRQFLAGKLPCLPGELPSYNDWENHLTTIFP 384

Query: 61  EVRLKRYLEMRGADGGPWRRLCALPAFWI--IYDEISLQHVLDMVADWTP 108
           EVRLKRYLEMRGADGGPWRRLCALPAFW+  +YD+ SLQ +LD+ ADWTP
Sbjct: 385 EVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDDDSLQAILDLTADWTP 434


>AT4G23100.2 | Symbols: RML1, PAD2, GSH1, CAD2 | GSH1
           (GLUTAMATE-CYSTEINE LIGASE); glutamate-cysteine ligase |
           chr4:12103779-12106751 REVERSE
          Length = 477

 Score =  207 bits (527), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 93/110 (84%), Positives = 101/110 (91%), Gaps = 2/110 (1%)

Query: 1   FEQYVDYALDVPMYFVYRKKKYIDCTGMTFRDFMAGKLPCIPGELPTLNDWENHLTTIFP 60
           FEQYVDYALDVPMYF YRK KYIDCTGMTFR F+AGKLPC+PGELP+ NDWENHLTTIFP
Sbjct: 325 FEQYVDYALDVPMYFAYRKNKYIDCTGMTFRQFLAGKLPCLPGELPSYNDWENHLTTIFP 384

Query: 61  EVRLKRYLEMRGADGGPWRRLCALPAFWI--IYDEISLQHVLDMVADWTP 108
           EVRLKRYLEMRGADGGPWRRLCALPAFW+  +YD+ SLQ +LD+ ADWTP
Sbjct: 385 EVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDDDSLQAILDLTADWTP 434