Jatropha Genome Database

JcCB0733091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0733091.10 - phase: 2 /partial
         (74 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G62040.1 | Symbols: ATG8C | ATG8C (autophagy 8c); microtubule...   139   3e-34
AT2G05630.2 | Symbols: ATG8D | autophagy 8d (APG8d) | chr2:20832...   135   5e-33
AT2G05630.1 | Symbols: ATG8D | autophagy 8d (APG8d) | chr2:20832...   135   7e-33
AT4G21980.2 | Symbols: APG8A, ATG8A | APG8A (AUTOPHAGY 8A); APG8...   134   9e-33
AT4G21980.1 | Symbols: APG8A, ATG8A | APG8A (AUTOPHAGY 8A); APG8...   134   9e-33
AT4G04620.2 | Symbols: ATG8B | ATG8B (autophagy 8b); microtubule...   133   2e-32
AT4G04620.1 | Symbols: ATG8B | ATG8B (autophagy 8b); microtubule...   133   2e-32
AT3G60640.1 | Symbols: ATG8G | ATG8G (AUTOPHAGY 8G); microtubule...   133   3e-32
AT4G16520.2 | Symbols: ATG8F | ATG8F (autophagy 8f); microtubule...   127   1e-30
AT4G16520.1 | Symbols: ATG8F | ATG8F (autophagy 8f); microtubule...   127   1e-30
AT2G45170.2 | Symbols: ATATG8E | AtATG8e; microtubule binding | ...   127   2e-30
AT2G45170.1 | Symbols: ATATG8E, ATG8E | AtATG8e; microtubule bin...   127   2e-30
AT3G15580.1 | Symbols: ATG8I, APG8H | APG8H (AUTOPHAGY 8H); APG8...    93   3e-20
AT3G06420.1 | Symbols: ATG8H | ATG8H (autophagy 8h); microtubule...    89   5e-19

>AT1G62040.1 | Symbols: ATG8C | ATG8C (autophagy 8c); microtubule
           binding | chr1:22933216-22934253 FORWARD
          Length = 119

 Score =  139 bits (350), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 65/69 (94%), Positives = 68/69 (98%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVPADLTVGQFVYVVRKRIKLSAEKAIF+FV+N LPPTAAMMSAIY+ENKDEDGFLYMT
Sbjct: 50  YLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMT 109

Query: 61  YSGENTFGL 69
           YSGENTFGL
Sbjct: 110 YSGENTFGL 118


>AT2G05630.2 | Symbols: ATG8D | autophagy 8d (APG8d) |
           chr2:2083211-2084775 REVERSE
          Length = 164

 Score =  135 bits (340), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 62/69 (89%), Positives = 68/69 (98%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVPADLTVGQFVYVVRKRIKLS EKAIFIFV+N+LPPTAA+MSAIYEE+KDEDGFLYM+
Sbjct: 94  YLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMS 153

Query: 61  YSGENTFGL 69
           YSGENTFG+
Sbjct: 154 YSGENTFGI 162


>AT2G05630.1 | Symbols: ATG8D | autophagy 8d (APG8d) |
           chr2:2083211-2084775 REVERSE
          Length = 120

 Score =  135 bits (339), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 62/69 (89%), Positives = 68/69 (98%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVPADLTVGQFVYVVRKRIKLS EKAIFIFV+N+LPPTAA+MSAIYEE+KDEDGFLYM+
Sbjct: 50  YLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMS 109

Query: 61  YSGENTFGL 69
           YSGENTFG+
Sbjct: 110 YSGENTFGI 118


>AT4G21980.2 | Symbols: APG8A, ATG8A | APG8A (AUTOPHAGY 8A); APG8
           activating enzyme/ APG8-specific protease/ Atg8 ligase |
           chr4:11655868-11656809 FORWARD
          Length = 137

 Score =  134 bits (338), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 62/68 (91%), Positives = 66/68 (97%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVPADLTVGQFVYVVRKRIKL AEKAIF+FV+N LPPTAA+MSAIYEE+KDEDGFLYMT
Sbjct: 65  YLVPADLTVGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMT 124

Query: 61  YSGENTFG 68
           YSGENTFG
Sbjct: 125 YSGENTFG 132


>AT4G21980.1 | Symbols: APG8A, ATG8A | APG8A (AUTOPHAGY 8A); APG8
           activating enzyme/ APG8-specific protease/ Atg8 ligase |
           chr4:11655913-11656809 FORWARD
          Length = 122

 Score =  134 bits (338), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 62/68 (91%), Positives = 66/68 (97%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVPADLTVGQFVYVVRKRIKL AEKAIF+FV+N LPPTAA+MSAIYEE+KDEDGFLYMT
Sbjct: 50  YLVPADLTVGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMT 109

Query: 61  YSGENTFG 68
           YSGENTFG
Sbjct: 110 YSGENTFG 117


>AT4G04620.2 | Symbols: ATG8B | ATG8B (autophagy 8b); microtubule
           binding | chr4:2328663-2329926 REVERSE
          Length = 122

 Score =  133 bits (335), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 62/70 (88%), Positives = 67/70 (95%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVPADLT+GQFVYVVRKRIKL AEKAIF+FV+N LPPTAA+MSAIYEE+KDEDGFLYMT
Sbjct: 50  YLVPADLTIGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMT 109

Query: 61  YSGENTFGLS 70
           YSGENTFG S
Sbjct: 110 YSGENTFGGS 119


>AT4G04620.1 | Symbols: ATG8B | ATG8B (autophagy 8b); microtubule
           binding | chr4:2328663-2329926 REVERSE
          Length = 122

 Score =  133 bits (335), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 62/70 (88%), Positives = 67/70 (95%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVPADLT+GQFVYVVRKRIKL AEKAIF+FV+N LPPTAA+MSAIYEE+KDEDGFLYMT
Sbjct: 50  YLVPADLTIGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMT 109

Query: 61  YSGENTFGLS 70
           YSGENTFG S
Sbjct: 110 YSGENTFGGS 119


>AT3G60640.1 | Symbols: ATG8G | ATG8G (AUTOPHAGY 8G); microtubule
           binding | chr3:22416118-22416971 FORWARD
          Length = 121

 Score =  133 bits (334), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 62/71 (87%), Positives = 67/71 (94%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVPADLTVGQFVYV+RKRI+LSAEKAIFIFV NVLPPT AMMS IY+ENK+EDGFLY+T
Sbjct: 50  YLVPADLTVGQFVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVT 109

Query: 61  YSGENTFGLSM 71
           YSGENTFG SM
Sbjct: 110 YSGENTFGSSM 120


>AT4G16520.2 | Symbols: ATG8F | ATG8F (autophagy 8f); microtubule
           binding | chr4:9306882-9308113 REVERSE
          Length = 121

 Score =  127 bits (319), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 64/69 (92%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVPADLTVGQFVYV+RKRIKLSAEKAIFIFV NVLPP  A+MS++YEE KD+DGFLY+T
Sbjct: 50  YLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVT 109

Query: 61  YSGENTFGL 69
           YSGENTFG 
Sbjct: 110 YSGENTFGF 118


>AT4G16520.1 | Symbols: ATG8F | ATG8F (autophagy 8f); microtubule
           binding | chr4:9306882-9308113 REVERSE
          Length = 121

 Score =  127 bits (319), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 58/69 (84%), Positives = 64/69 (92%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVPADLTVGQFVYV+RKRIKLSAEKAIFIFV NVLPP  A+MS++YEE KD+DGFLY+T
Sbjct: 50  YLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVT 109

Query: 61  YSGENTFGL 69
           YSGENTFG 
Sbjct: 110 YSGENTFGF 118


>AT2G45170.2 | Symbols: ATATG8E | AtATG8e; microtubule binding |
           chr2:18624545-18625526 FORWARD
          Length = 122

 Score =  127 bits (319), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 58/70 (82%), Positives = 65/70 (92%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVP+DLTVGQFVYV+RKRIKLSAEKAIFIFV NVLPPT  +MS++YE+ KDEDGFLY+T
Sbjct: 51  YLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYIT 110

Query: 61  YSGENTFGLS 70
           YSGENTFG S
Sbjct: 111 YSGENTFGAS 120


>AT2G45170.1 | Symbols: ATATG8E, ATG8E | AtATG8e; microtubule
           binding | chr2:18624545-18625526 FORWARD
          Length = 122

 Score =  127 bits (319), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 58/70 (82%), Positives = 65/70 (92%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVP+DLTVGQFVYV+RKRIKLSAEKAIFIFV NVLPPT  +MS++YE+ KDEDGFLY+T
Sbjct: 51  YLVPSDLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYIT 110

Query: 61  YSGENTFGLS 70
           YSGENTFG S
Sbjct: 111 YSGENTFGAS 120


>AT3G15580.1 | Symbols: ATG8I, APG8H | APG8H (AUTOPHAGY 8H); APG8
           activating enzyme/ APG8-specific protease/ Atg8 ligase/
           microtubule binding | chr3:5274075-5275000 REVERSE
          Length = 115

 Score = 93.2 bits (230), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 53/68 (77%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           +LVP D++VGQF+Y++  R+ LS  KA+F+FV N LP TAA+M ++YE  KD+DGF+YM 
Sbjct: 48  FLVPRDMSVGQFIYILSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMC 107

Query: 61  YSGENTFG 68
           YS E TFG
Sbjct: 108 YSSEKTFG 115


>AT3G06420.1 | Symbols: ATG8H | ATG8H (autophagy 8h); microtubule
           binding | chr3:1955219-1956274 REVERSE
          Length = 119

 Score = 89.0 bits (219), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 51/68 (75%)

Query: 1   YLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVRNVLPPTAAMMSAIYEENKDEDGFLYMT 60
           YLVP D+TVG F++++ KR++L   KA+F+FV N LP TA+ M ++Y   K+EDGFLYM 
Sbjct: 52  YLVPRDMTVGHFIHMLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMC 111

Query: 61  YSGENTFG 68
           YS E TFG
Sbjct: 112 YSTEKTFG 119