Jatropha Genome Database
- JcCB0703101.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0703101.10 + phase: 0
(258 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G31590.1 | Symbols: ATCSLC05, CSLC05, ATCSLC5 | ATCSLC5 (CELL... 338 2e-93
AT2G24630.1 | Symbols: ATCSLC08, CSLC08, ATCSLC8 | ATCSLC08; cel... 317 6e-87
AT4G07960.1 | Symbols: ATCSLC12, CSLC12 | ATCSLC12 (CELLULOSE-SY... 199 2e-51
AT3G28180.1 | Symbols: ATCSLC04, CSLC04, ATCSLC4, CSLC4 | ATCSLC... 191 3e-49
AT3G07330.1 | Symbols: ATCSLC06, CSLC06, ATCSLC6 | ATCSLC6 (CELL... 135 2e-32
AT1G23480.2 | Symbols: ATCSLA03, CSLA03, ATCSLA3 | ATCSLA03 (CEL... 52 4e-07
AT1G23480.1 | Symbols: ATCSLA03, CSLA03, ATCSLA3 | ATCSLA03 (CEL... 52 4e-07
AT1G24070.1 | Symbols: ATCSLA10, CSLA10 | ATCSLA10; cellulose sy... 48 8e-06
AT2G35650.1 | Symbols: ATCSLA07, CSLA07, ATCSLA7, CSLA7 | ATCSLA... 47 8e-06
>AT4G31590.1 | Symbols: ATCSLC05, CSLC05, ATCSLC5 | ATCSLC5
(CELLULOSE-SYNTHASE LIKE C5); cellulose synthase/
transferase, transferring glycosyl groups |
chr4:15309889-15312336 REVERSE
Length = 692
Score = 338 bits (867), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 156/223 (69%), Positives = 190/223 (85%), Gaps = 3/223 (1%)
Query: 1 MENPNYSVVEINGPDAAFQPVEKSRGKNAKQVTWVLLLKAHRAVGCVAWLATFFWALLGA 60
MENPNYSVVEI+GPD+AF+PVEKSRGKNAKQVTWVLLLKAHRAVGC+ WLAT FW+LLGA
Sbjct: 25 MENPNYSVVEIDGPDSAFRPVEKSRGKNAKQVTWVLLLKAHRAVGCLTWLATVFWSLLGA 84
Query: 61 IKKRLIFRQGVTVATEKLGKGKLVLRIIRVFLATSLLILAFEVVAYFKGWYYFENANLHI 120
IKKRL F + +EKLG+ + + I++FLA SL+IL FE+VAYF+GW+YF++ +LHI
Sbjct: 85 IKKRLSFTH--PLGSEKLGRDRWLFTAIKLFLAVSLVILGFEIVAYFRGWHYFQSPSLHI 142
Query: 121 P-RTLNLQGLLHMVYVAWLTFRADYIAPAIQVLSKFCVVLFLIQSLDRMILCLGCFWIKY 179
P TL +Q L H+VYV WLT RADYIAP I+ LSKFC+VLFLIQS+DR++LCLGCFWIKY
Sbjct: 143 PTSTLEIQSLFHLVYVGWLTLRADYIAPPIKALSKFCIVLFLIQSVDRLVLCLGCFWIKY 202
Query: 180 KKIKPTINGDPFKSDDAEAQGYDYPMVLVQIPMCNEREVKDRA 222
KKIKP + +PF++DDAE G +YPMVLVQIPMCNEREV +++
Sbjct: 203 KKIKPRFDEEPFRNDDAEGSGSEYPMVLVQIPMCNEREVYEQS 245
>AT2G24630.1 | Symbols: ATCSLC08, CSLC08, ATCSLC8 | ATCSLC08;
cellulose synthase/ transferase, transferring glycosyl
groups | chr2:10471558-10473984 REVERSE
Length = 690
Score = 317 bits (811), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 143/223 (64%), Positives = 184/223 (82%), Gaps = 3/223 (1%)
Query: 1 MENPNYSVVEINGPDAAFQPVEKSRGKNAKQVTWVLLLKAHRAVGCVAWLATFFWALLGA 60
MENPNYS+VE+ PD+AFQP+EKSRGKNAKQVTWVLLLKAH+AVGC+ W+AT FW+LLG+
Sbjct: 25 MENPNYSIVEVEEPDSAFQPMEKSRGKNAKQVTWVLLLKAHKAVGCLTWVATVFWSLLGS 84
Query: 61 IKKRLIFRQGVTVATEKLGKGKLVLRIIRVFLATSLLILAFEVVAYFKGWYYFENANLHI 120
+K+RL F + +E+LG+ + I++FL SL ILAFE+VAY++GW+YF+N NLHI
Sbjct: 85 VKRRLSFTH--PLGSERLGRDGWLFSAIKLFLVASLAILAFELVAYYRGWHYFKNPNLHI 142
Query: 121 PRT-LNLQGLLHMVYVAWLTFRADYIAPAIQVLSKFCVVLFLIQSLDRMILCLGCFWIKY 179
P + L +Q LLH+ YV WL+ RADYIAP I+ LSKFC+VLFL+QS+DR+ILCLGC WIK+
Sbjct: 143 PTSKLEIQSLLHLFYVGWLSLRADYIAPPIKALSKFCIVLFLVQSVDRLILCLGCLWIKF 202
Query: 180 KKIKPTINGDPFKSDDAEAQGYDYPMVLVQIPMCNEREVKDRA 222
KKIKP I+ + F++DD E G +YPMVLVQIPMCNEREV +++
Sbjct: 203 KKIKPRIDEEHFRNDDFEGSGSEYPMVLVQIPMCNEREVYEQS 245
>AT4G07960.1 | Symbols: ATCSLC12, CSLC12 | ATCSLC12
(CELLULOSE-SYNTHASE LIKE C12); cellulose synthase/
transferase, transferring glycosyl groups |
chr4:4802628-4805114 REVERSE
Length = 699
Score = 199 bits (505), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 109/240 (45%), Positives = 150/240 (62%), Gaps = 16/240 (6%)
Query: 1 MENPN-YSVVEINGP---DAAFQPVEKSRGKNAKQVTWVLLLKAHRAVGCVAWLATFFWA 56
MENPN +S+VE+ P D + EKSR KNA+Q+TWVLLLKAHRA GC+ L + +A
Sbjct: 26 MENPNNWSMVELESPSHDDFLVRTHEKSRNKNARQLTWVLLLKAHRAAGCLTSLGSALFA 85
Query: 57 LLGAIKKRLIF-RQGVTVATEKLG---------KGKLVLRIIRVFLATSLLILAFEVVAY 106
L A+++R+ R + +++ +G K KL ++VFL SL++L FE+ AY
Sbjct: 86 LGTAVRRRIAAGRTDIEISSSGVGSLQKQNHTKKSKLFYSCLKVFLWLSLILLGFEIAAY 145
Query: 107 FKGWYYFENANLHIPRTLNLQGLLHMVYVAWLTFRADYIAPAIQVLSKFCVVLFLIQSLD 166
FKGW F + L + N +G VY W+ R +Y+AP +Q L+ C+VLFL+QSLD
Sbjct: 146 FKGWS-FGTSKLQLQFIFN-KGFFDWVYTRWVLLRVEYLAPPLQFLANGCIVLFLVQSLD 203
Query: 167 RMILCLGCFWIKYKKIKPTINGDPFKSDDAEAQGYDYPMVLVQIPMCNEREVKDRAFIPV 226
R+ILCLGCFWI++KKIKP D ++ G PMVLVQIPMCNE+EV ++ V
Sbjct: 204 RLILCLGCFWIRFKKIKPVPKPDSISDLESGDNGAFLPMVLVQIPMCNEKEVYQQSIAAV 263
>AT3G28180.1 | Symbols: ATCSLC04, CSLC04, ATCSLC4, CSLC4 | ATCSLC04
(CELLULOSE-SYNTHASE LIKE C4); cellulose synthase/
transferase, transferring glycosyl groups |
chr3:10506110-10509067 FORWARD
Length = 673
Score = 191 bits (486), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 147/224 (65%), Gaps = 18/224 (8%)
Query: 1 MENP-NYSVVEINGPDAAFQPVEKSRGKNAKQVTWVLLLKAHRAVGCVAWLATFFWALLG 59
ME P N+S++EING D + P +K + + KQ +W LLLKAHR + C++WL +
Sbjct: 10 MEKPDNFSLLEINGSDPSSFP-DKRKSISPKQFSWFLLLKAHRLISCLSWLVS------- 61
Query: 60 AIKKRLIFR-QGVTVATEKLGKGKLVLRIIRVFLATSLLILAFEVVAYFKGWYYFENANL 118
++KKR+ F + + + +GK + R I+ L S++ L+ E+VA+FK W N +L
Sbjct: 62 SVKKRIAFSAKNINEEEDPKSRGKQMYRFIKACLVISIIALSIEIVAHFKKW----NLDL 117
Query: 119 HIPRTLNLQGLLHMVYVAWLTFRADYIAPAIQVLSKFCVVLFLIQSLDRMILCLGCFWIK 178
+ + GL+ Y+AWL+FR+DYIAP + LS+FC VLFLIQSLDR++LCLGCFWIK
Sbjct: 118 INRPSWEVYGLVEWSYMAWLSFRSDYIAPLVISLSRFCTVLFLIQSLDRLVLCLGCFWIK 177
Query: 179 YKKIKPTINGDPFKSDDAEAQGYDYPMVLVQIPMCNEREVKDRA 222
+KKI+P + + +D + +PMVL+QIPMCNEREV +++
Sbjct: 178 FKKIEPKLTEESIDLEDPSS----FPMVLIQIPMCNEREVYEQS 217
>AT3G07330.1 | Symbols: ATCSLC06, CSLC06, ATCSLC6 | ATCSLC6
(CELLULOSE-SYNTHASE LIKE C6); cellulose synthase/
transferase, transferring glycosyl groups |
chr3:2336121-2338942 REVERSE
Length = 682
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 122/218 (55%), Gaps = 12/218 (5%)
Query: 2 ENPNYSVVEINGPDAAFQPVEKSRGKNAKQVTWVLLLKAHRAVGCVAWLATFFWALLGAI 61
++ + VEI P ++ R + +Q++ + LLK + W+ F L+
Sbjct: 29 DDEAFLTVEIRTPATVDPDKDRIRTRTVRQLSRLYLLKFKQLASSFLWIGNSFLYLVRTA 88
Query: 62 KKRLIFRQGVTVATEKLGKGKLVLRIIRVFLATSLLILAFEVVAYFKGWYYFENANLHIP 121
+R+ +V++ + R+I+ FL +L+L FE+ AYFKGW++ P
Sbjct: 89 NRRIANDNPPSVSS-----SARLYRLIKGFLVVVVLLLCFELAAYFKGWHFTP------P 137
Query: 122 RTLNLQGLLHMVYVAWLTFRADYIAPAIQVLSKFCVVLFLIQSLDRMILCLGCFWIKYKK 181
+ + + +VY WL RA Y+AP +Q L+ C+VLFLIQS+DR++L LGCFWIK ++
Sbjct: 138 SVASAEVAVEVVYAWWLEIRASYLAPPLQSLTNVCIVLFLIQSVDRLVLVLGCFWIKLRR 197
Query: 182 IKPTINGD-PFKSDDAEAQGYDYPMVLVQIPMCNEREV 218
IKP + + P K + DYPMV+VQIPMCNE+EV
Sbjct: 198 IKPVASMEYPTKLVGEGVRLEDYPMVIVQIPMCNEKEV 235
>AT1G23480.2 | Symbols: ATCSLA03, CSLA03, ATCSLA3 | ATCSLA03
(CELLULOSE SYNTHASE-LIKE A3); cellulose synthase/
transferase, transferring glycosyl groups |
chr1:8333917-8336230 FORWARD
Length = 556
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 115 NANLHIPRTLNLQGLLHMVYVAWLTFRADYIAPAIQVLSKFCVVLFLIQSLDRMILCLGC 174
A+L + G++ + W R P ++ L C+V+ L+ ++R+ + +
Sbjct: 29 GASLDTTDGVVRSGIIGEIIYIWKQTRIFVFIPILKCLVTICLVMSLLLFIERVYMSIVV 88
Query: 175 FWIKYKKIKP--TINGDPFKSDDAEAQGYDYPMVLVQIPMCNEREV 218
++K + P +P DD E +YPMVL+QIPM NE+EV
Sbjct: 89 VFVKLLRRTPEKVHKWEPINDDDLELANTNYPMVLIQIPMYNEKEV 134
>AT1G23480.1 | Symbols: ATCSLA03, CSLA03, ATCSLA3 | ATCSLA03
(CELLULOSE SYNTHASE-LIKE A3); cellulose synthase/
transferase, transferring glycosyl groups |
chr1:8333917-8336230 FORWARD
Length = 556
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 115 NANLHIPRTLNLQGLLHMVYVAWLTFRADYIAPAIQVLSKFCVVLFLIQSLDRMILCLGC 174
A+L + G++ + W R P ++ L C+V+ L+ ++R+ + +
Sbjct: 29 GASLDTTDGVVRSGIIGEIIYIWKQTRIFVFIPILKCLVTICLVMSLLLFIERVYMSIVV 88
Query: 175 FWIKYKKIKP--TINGDPFKSDDAEAQGYDYPMVLVQIPMCNEREV 218
++K + P +P DD E +YPMVL+QIPM NE+EV
Sbjct: 89 VFVKLLRRTPEKVHKWEPINDDDLELANTNYPMVLIQIPMYNEKEV 134
>AT1G24070.1 | Symbols: ATCSLA10, CSLA10 | ATCSLA10; cellulose
synthase/ transferase, transferring glycosyl groups |
chr1:8516437-8519734 REVERSE
Length = 552
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 140 FRADYIAPAIQVLSKFCVVLFLIQSLDRMILCLGCFWIKYKKIKPT-INGDPFKSDDAEA 198
FR+ +I P + L FC+++ L+ ++ + + L ++K + KP + +D E
Sbjct: 57 FRSLFIVPLFKCLVAFCLIISLLVFIEGIYMNLVVLYVKVFERKPEKVYRWEAMQEDIEL 116
Query: 199 QGYDYPMVLVQIPMCNEREV 218
YPMVLVQIPM NE+EV
Sbjct: 117 GHETYPMVLVQIPMYNEKEV 136
>AT2G35650.1 | Symbols: ATCSLA07, CSLA07, ATCSLA7, CSLA7 | ATCSLA07
(CELLULOSE SYNTHASE LIKE); mannan synthase/ transferase,
transferring glycosyl groups | chr2:14985625-14988187
FORWARD
Length = 556
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 137 WLTFRADYIAPAIQVLSKFCVVLFLIQSLDRMILCLGCFWIKYKKIKPTINGDPF----- 191
W RA + P + L C+V+ ++ ++ M + + ++K K KP + F
Sbjct: 51 WQLIRAVVVVPVFKFLVLLCLVMSVMFFVEVMYMGIVVLYVKLFKRKP----EKFYKWEA 106
Query: 192 KSDDAEAQGYDYPMVLVQIPMCNEREVKDRA 222
DD E YPMVLVQIPM NE+EV +++
Sbjct: 107 MEDDVECGSASYPMVLVQIPMYNEKEVCEQS 137