Jatropha Genome Database
- JcCB0699651.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0699651.10 - phase: 0 /partial
(155 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G64650.1 | Symbols: | LOCATED IN: plasma membrane; EXPRESSED... 291 1e-79
AT3G49310.1 | Symbols: | LOCATED IN: endomembrane system; EXPRE... 286 3e-78
AT4G27720.1 | Symbols: | LOCATED IN: plasma membrane; EXPRESSED... 286 3e-78
AT1G64650.2 | Symbols: | LOCATED IN: plasma membrane; EXPRESSED... 207 2e-54
AT2G23093.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 2e-07
>AT1G64650.1 | Symbols: | LOCATED IN: plasma membrane; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF791 (InterPro:IPR008509), Major facilitator
superfamily, general substrate transporter
(InterPro:IPR016196); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G27720.1); Has 565
Blast hits to 562 proteins in 197 species: Archae - 7;
Bacteria - 312; Metazoa - 76; Fungi - 39; Plants - 85;
Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
| chr1:24023805-24026336 REVERSE
Length = 462
Score = 291 bits (745), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 137/155 (88%), Positives = 150/155 (96%)
Query: 1 MEIFYFMVFGGLSAVVAALELSKTSRDRINTSTAFNAFKNNYLVVYSLMMAGDWLQGPYV 60
MEIFYF+VFGGL+A+VA LELSK+++DRINTS+AFN+FKNNYL+VYSLMMAGDWLQGPYV
Sbjct: 1 MEIFYFVVFGGLAAIVAGLELSKSNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYV 60
Query: 61 YYLYSEYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRRRACVTYCITYILSCMTKH 120
YYLYS YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR+RA +TYCITYILSC+TKH
Sbjct: 61 YYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRASITYCITYILSCITKH 120
Query: 121 SPDYKVLMLGRVLGGIATSLLFSAFESWLVAEHFK 155
SP YKVLM+GRVLGGIATSLLFSAFESWLVAEH K
Sbjct: 121 SPQYKVLMVGRVLGGIATSLLFSAFESWLVAEHNK 155
>AT3G49310.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF791 (InterPro:IPR008509), Major
facilitator superfamily, general substrate transporter
(InterPro:IPR016196); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G27720.1); Has 550
Blast hits to 545 proteins in 201 species: Archae - 5;
Bacteria - 285; Metazoa - 85; Fungi - 33; Plants - 99;
Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).
| chr3:18285084-18287991 REVERSE
Length = 460
Score = 286 bits (733), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 131/155 (84%), Positives = 150/155 (96%)
Query: 1 MEIFYFMVFGGLSAVVAALELSKTSRDRINTSTAFNAFKNNYLVVYSLMMAGDWLQGPYV 60
ME+FY++VFG ++AVVAALELSKT++DRINTS++FN+FKNNYL+V+S+MMAGDWLQGPYV
Sbjct: 1 MEVFYYLVFGVMAAVVAALELSKTNKDRINTSSSFNSFKNNYLLVFSIMMAGDWLQGPYV 60
Query: 61 YYLYSEYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRRRACVTYCITYILSCMTKH 120
YYLYS YGFGKG+IGQLFIAGFGSSMLFGTIVGSLADKQGR+RACVTYCI YILSC+TKH
Sbjct: 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCIVYILSCITKH 120
Query: 121 SPDYKVLMLGRVLGGIATSLLFSAFESWLVAEHFK 155
SP YKVLM+GR+LGGIATSLLFSAFESWL+AEH K
Sbjct: 121 SPQYKVLMVGRILGGIATSLLFSAFESWLIAEHNK 155
>AT4G27720.1 | Symbols: | LOCATED IN: plasma membrane; EXPRESSED
IN: 21 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF791 (InterPro:IPR008509), Major facilitator
superfamily, general substrate transporter
(InterPro:IPR016196); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G64650.1); Has 496
Blast hits to 491 proteins in 183 species: Archae - 5;
Bacteria - 234; Metazoa - 75; Fungi - 33; Plants - 96;
Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink).
| chr4:13831203-13833521 FORWARD
Length = 460
Score = 286 bits (733), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 136/155 (87%), Positives = 148/155 (95%)
Query: 1 MEIFYFMVFGGLSAVVAALELSKTSRDRINTSTAFNAFKNNYLVVYSLMMAGDWLQGPYV 60
MEIFY++VFG L VVAALELSK ++DRINTS+AFN+FKNNYL+VYSLMMAGDWLQGPYV
Sbjct: 1 MEIFYYLVFGVLGLVVAALELSKNNKDRINTSSAFNSFKNNYLLVYSLMMAGDWLQGPYV 60
Query: 61 YYLYSEYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRRRACVTYCITYILSCMTKH 120
YYLYS YGFGKG+IGQLFIAGFGSSMLFGTIVGSLADKQGR+RACVTYCITYILSC+TKH
Sbjct: 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKH 120
Query: 121 SPDYKVLMLGRVLGGIATSLLFSAFESWLVAEHFK 155
SP YKVLM+GRVLGGIATSLLFS+FESWLVAEH K
Sbjct: 121 SPQYKVLMVGRVLGGIATSLLFSSFESWLVAEHNK 155
>AT1G64650.2 | Symbols: | LOCATED IN: plasma membrane; EXPRESSED
IN: 23 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF791 (InterPro:IPR008509), Major facilitator
superfamily, general substrate transporter
(InterPro:IPR016196); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G27720.1); Has 548
Blast hits to 545 proteins in 182 species: Archae - 5;
Bacteria - 298; Metazoa - 76; Fungi - 38; Plants - 85;
Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
| chr1:24023805-24026048 REVERSE
Length = 421
Score = 207 bits (527), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 97/106 (91%), Positives = 102/106 (96%)
Query: 50 MAGDWLQGPYVYYLYSEYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRRRACVTYC 109
+AGDWLQGPYVYYLYS YGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGR+RA +TYC
Sbjct: 9 LAGDWLQGPYVYYLYSTYGFGKGEIGQLFIAGFGSSMLFGTIVGSLADKQGRKRASITYC 68
Query: 110 ITYILSCMTKHSPDYKVLMLGRVLGGIATSLLFSAFESWLVAEHFK 155
ITYILSC+TKHSP YKVLM+GRVLGGIATSLLFSAFESWLVAEH K
Sbjct: 69 ITYILSCITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLVAEHNK 114
>AT2G23093.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: Protein
of unknown function DUF791 (InterPro:IPR008509), Major
facilitator superfamily, general substrate transporter
(InterPro:IPR016196); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G49310.1); Has 251
Blast hits to 248 proteins in 89 species: Archae - 0;
Bacteria - 66; Metazoa - 68; Fungi - 18; Plants - 79;
Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).
| chr2:9832193-9834416 FORWARD
Length = 449
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 30 NTSTAFNAFKNNYLVVYSLMMAGDWLQGPYVYYLYSEYGFGKGEIGQLFIAGFGSSMLFG 89
+ S++F F+ +L +Y+L + L Y + YG K + G+ ++++ G
Sbjct: 46 SISSSFARFQRWFLAIYTLSSVMEGLLSVYGELELTTYGLSKESMVFYLCVGYSTALVLG 105
Query: 90 TIVGSLADKQGRRRACVTYCITYILSCMTKH---SPDYKVLMLGRVLGGIATSLLFSAFE 146
++G ++D G+++ C+ YC+ +++ + K SP + L G+ S FE
Sbjct: 106 PVLGVVSDLIGQKKICLLYCVLHLIVGVWKRITMSPSAWFANVFLSLAGLVYSF---GFE 162
Query: 147 SWLVAEHFK 155
+WLV EH K
Sbjct: 163 TWLVVEHEK 171