Jatropha Genome Database
- JcCB0694581.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0694581.10 - phase: 0 /partial
(87 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G25240.1 | Symbols: SKS1 | SKS1 (SKU5 SIMILAR 1); copper ion ... 137 1e-33
AT5G51480.1 | Symbols: SKS2 | SKS2 (SKU5 SIMILAR 2); copper ion ... 131 8e-32
AT4G12420.1 | Symbols: SKU5 | SKU5; copper ion binding / oxidore... 115 7e-27
AT5G48450.1 | Symbols: sks3 | sks3 (SKU5 Similar 3); copper ion ... 86 5e-18
AT4G37160.1 | Symbols: sks15 | sks15 (SKU5 Similar 15); copper i... 73 3e-14
AT2G23630.1 | Symbols: sks16 | sks16 (SKU5 Similar 16); copper i... 73 4e-14
AT1G55560.1 | Symbols: sks14 | sks14 (SKU5 Similar 14); copper i... 72 9e-14
AT3G13400.1 | Symbols: sks13 | sks13 (SKU5 Similar 13); copper i... 69 5e-13
AT1G21850.1 | Symbols: sks8 | sks8 (SKU5 Similar 8); copper ion ... 68 1e-12
AT4G22010.1 | Symbols: sks4 | sks4 (SKU5 Similar 4); copper ion ... 68 1e-12
AT1G76160.1 | Symbols: sks5 | sks5 (SKU5 Similar 5); copper ion ... 67 2e-12
AT5G66920.1 | Symbols: sks17 | sks17 (SKU5 Similar 17); copper i... 66 4e-12
AT1G41830.1 | Symbols: SKS6 | SKS6 (SKU5-SIMILAR 6); pectinester... 66 5e-12
AT1G55570.1 | Symbols: sks12 | sks12 (SKU5 Similar 12); copper i... 65 8e-12
AT4G38420.1 | Symbols: sks9 | sks9 (SKU5 Similar 9); copper ion ... 65 9e-12
AT3G13390.1 | Symbols: sks11 | sks11 (SKU5 Similar 11); copper i... 64 2e-11
AT4G28090.1 | Symbols: sks10 | sks10 (SKU5 Similar 10); copper i... 64 2e-11
AT1G75790.1 | Symbols: sks18 | sks18 (SKU5 Similar 18); copper i... 63 4e-11
AT1G21860.1 | Symbols: sks7 | sks7 (SKU5 Similar 7); copper ion ... 61 1e-10
>AT4G25240.1 | Symbols: SKS1 | SKS1 (SKU5 SIMILAR 1); copper ion
binding / oxidoreductase | chr4:12930539-12933563
FORWARD
Length = 589
Score = 137 bits (345), Expect = 1e-33, Method: Composition-based stats.
Identities = 62/78 (79%), Positives = 70/78 (89%), Gaps = 1/78 (1%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPEENGETEMGPPDNVRYCG 60
VYPGGWTA+L+SLDNVGVWN+RVENLDRWYLG ETYMRI NPEE+G+TEM PPDNV YCG
Sbjct: 492 VYPGGWTAVLISLDNVGVWNIRVENLDRWYLGEETYMRITNPEEDGKTEMDPPDNVLYCG 551
Query: 61 ALRSLQKTD-NSAAISIL 77
AL++LQK +SAA SIL
Sbjct: 552 ALKNLQKEQHHSAATSIL 569
>AT5G51480.1 | Symbols: SKS2 | SKS2 (SKU5 SIMILAR 2); copper ion
binding / oxidoreductase | chr5:20910433-20913153
FORWARD
Length = 592
Score = 131 bits (330), Expect = 8e-32, Method: Composition-based stats.
Identities = 61/89 (68%), Positives = 72/89 (80%), Gaps = 2/89 (2%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPEENGETEMGPPDNVRYCG 60
VYPG WTA+L+SLDNVGVWN+RVENLDRWYLG ETYMRIINPEENG TEM PP+NV YCG
Sbjct: 492 VYPGAWTAVLISLDNVGVWNIRVENLDRWYLGQETYMRIINPEENGSTEMDPPENVMYCG 551
Query: 61 ALRSLQKTD--NSAAISILISKLELYISL 87
AL+++QK +SA S+ +L L S+
Sbjct: 552 ALQAMQKEQHHSSATKSMTNGQLILIFSM 580
>AT4G12420.1 | Symbols: SKU5 | SKU5; copper ion binding /
oxidoreductase | chr4:7349941-7352868 REVERSE
Length = 587
Score = 115 bits (287), Expect = 7e-27, Method: Composition-based stats.
Identities = 53/84 (63%), Positives = 63/84 (75%), Gaps = 3/84 (3%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPEENGETEMGPPDNVRYCG 60
VYPG W+AIL+SLDN G WNLR ENLD WYLG ETY+R++NP+EN +TE G PDNV YCG
Sbjct: 489 VYPGAWSAILISLDNPGAWNLRTENLDSWYLGQETYVRVVNPDENNKTEFGHPDNVLYCG 548
Query: 61 ALRSL---QKTDNSAAISILISKL 81
AL L QK +SA+ SI + L
Sbjct: 549 ALSKLQKPQKVSSSASKSIGFTSL 572
>AT5G48450.1 | Symbols: sks3 | sks3 (SKU5 Similar 3); copper ion
binding / oxidoreductase | chr5:19633295-19635612
REVERSE
Length = 550
Score = 85.9 bits (211), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/68 (55%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPE-ENGETEMGPPDNVRYC 59
V+PG WTA+LVSLDN G+WNLR++NL WYLG E Y+ ++NPE + +E P N YC
Sbjct: 483 VFPGAWTAVLVSLDNAGMWNLRIDNLASWYLGQELYLSVVNPEIDIDSSENSVPKNSIYC 542
Query: 60 GALRSLQK 67
G L LQK
Sbjct: 543 GRLSPLQK 550
>AT4G37160.1 | Symbols: sks15 | sks15 (SKU5 Similar 15); copper ion
binding / oxidoreductase | chr4:17494820-17497124
REVERSE
Length = 541
Score = 73.2 bits (178), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPEENGETEMGPPDNVRYCG 60
VYP WT ILVSLDN G+WNLR + R YLG E Y+R+ N E++ TE PP NV YCG
Sbjct: 476 VYPLSWTTILVSLDNKGMWNLRSQIWSRRYLGQELYVRVWNDEKSLYTEAEPPLNVLYCG 535
>AT2G23630.1 | Symbols: sks16 | sks16 (SKU5 Similar 16); copper ion
binding / pectinesterase | chr2:10052581-10055311
REVERSE
Length = 541
Score = 72.8 bits (177), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/60 (56%), Positives = 42/60 (70%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPEENGETEMGPPDNVRYCG 60
VYP WT+ILVSLDN G+WNLR + R YLG E Y+R+ N E++ TE PP NV +CG
Sbjct: 474 VYPMSWTSILVSLDNKGMWNLRSQIWSRRYLGQELYVRVWNNEKSLYTESEPPVNVLFCG 533
>AT1G55560.1 | Symbols: sks14 | sks14 (SKU5 Similar 14); copper ion
binding / oxidoreductase | chr1:20754474-20756527
REVERSE
Length = 549
Score = 71.6 bits (174), Expect = 9e-14, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPEENGETEMGPPDNVRYCG 60
VYP W+AIL++ DN G+WN+R ENL+R YLG + Y+ +++PE++ E P N CG
Sbjct: 478 VYPKSWSAILLTFDNAGMWNIRSENLERKYLGEQLYVSVLSPEKSLRDEYNIPLNTNLCG 537
Query: 61 ALRSL 65
++ L
Sbjct: 538 IVKGL 542
>AT3G13400.1 | Symbols: sks13 | sks13 (SKU5 Similar 13); copper ion
binding / oxidoreductase | chr3:4355257-4357305 FORWARD
Length = 551
Score = 69.3 bits (168), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPEENGETEMGPPDNVRYCG 60
VYP W+AIL++ DN G+WN+R EN +R YLG + Y+ +++PE++ E P N CG
Sbjct: 479 VYPKSWSAILLTFDNAGMWNIRSENWERRYLGQQLYVSVLSPEKSLRDEYNIPLNTNLCG 538
Query: 61 ALRSL 65
++ L
Sbjct: 539 IVKGL 543
>AT1G21850.1 | Symbols: sks8 | sks8 (SKU5 Similar 8); copper ion
binding / oxidoreductase | chr1:7667803-7670530 REVERSE
Length = 551
Score = 68.2 bits (165), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 37/60 (61%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPEENGETEMGPPDNVRYCG 60
VYP WTAI VSLDNVG+WNLR E +R YLG + YMR+ P + E P N CG
Sbjct: 472 VYPRSWTAIYVSLDNVGMWNLRSELWERQYLGQQFYMRVYTPSTSLRDEYLIPKNALLCG 531
>AT4G22010.1 | Symbols: sks4 | sks4 (SKU5 Similar 4); copper ion
binding / oxidoreductase | chr4:11663429-11666463
FORWARD
Length = 541
Score = 67.8 bits (164), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 37/60 (61%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPEENGETEMGPPDNVRYCG 60
VYP WTAI ++LDNVG+WN+R EN R YLG + Y+R+ + E PP N CG
Sbjct: 472 VYPRAWTAIYIALDNVGMWNIRSENWARQYLGQQFYLRVYTSSTSYRDEYPPPKNALMCG 531
>AT1G76160.1 | Symbols: sks5 | sks5 (SKU5 Similar 5); copper ion
binding / oxidoreductase | chr1:28578211-28581020
REVERSE
Length = 541
Score = 67.4 bits (163), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 37/60 (61%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPEENGETEMGPPDNVRYCG 60
VYP WTAIL++LDNVG+WNLR E R YLG + Y+R+ P + E P N CG
Sbjct: 472 VYPSSWTAILIALDNVGMWNLRSEFWARQYLGQQLYLRVYTPSTSLRDEYPIPKNALLCG 531
>AT5G66920.1 | Symbols: sks17 | sks17 (SKU5 Similar 17); copper ion
binding / oxidoreductase | chr5:26722963-26725370
FORWARD
Length = 546
Score = 66.2 bits (160), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPEENGETEMGPPDNVRYCG 60
VYP WT ILVSLDN G+WN+R +R Y G + Y+++ N ++ E PPDN++ CG
Sbjct: 480 VYPESWTTILVSLDNQGMWNMRSAIWERQYSGQQFYLKVWNSVQSLANEYNPPDNLQLCG 539
>AT1G41830.1 | Symbols: SKS6 | SKS6 (SKU5-SIMILAR 6); pectinesterase
| chr1:15603892-15607802 REVERSE
Length = 542
Score = 65.9 bits (159), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 37/63 (58%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPEENGETEMGPPDNVRYCG 60
VYP WTAI ++LDNVG+WNLR E R YLG + Y+R+ + E P N R CG
Sbjct: 473 VYPKSWTAIYIALDNVGMWNLRSEFWARQYLGQQLYLRVFTSSTSLRDEYPIPKNSRLCG 532
Query: 61 ALR 63
R
Sbjct: 533 RAR 535
>AT1G55570.1 | Symbols: sks12 | sks12 (SKU5 Similar 12); copper ion
binding / oxidoreductase | chr1:20757882-20759771
FORWARD
Length = 555
Score = 65.1 bits (157), Expect = 8e-12, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPEENGETEMGPPDNVRYCG 60
VYP W AIL++ DN G+WN+R EN +R YLG + Y +++PE++ E P+ CG
Sbjct: 482 VYPKCWAAILLTFDNCGMWNIRSENAERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCG 541
Query: 61 ALRSLQKTDNSAA 73
++ K + A
Sbjct: 542 LVKGKPKVNPYAG 554
>AT4G38420.1 | Symbols: sks9 | sks9 (SKU5 Similar 9); copper ion
binding / oxidoreductase | chr4:17982840-17985173
FORWARD
Length = 549
Score = 65.1 bits (157), Expect = 9e-12, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 37/60 (61%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPEENGETEMGPPDNVRYCG 60
VYP WTA+ V+LDNVG+WNLR E R YLG + Y+R+ +P + E P N CG
Sbjct: 481 VYPESWTAVYVALDNVGMWNLRSEYWARQYLGQQFYLRVYSPTHSLRDEYLLPKNALLCG 540
>AT3G13390.1 | Symbols: sks11 | sks11 (SKU5 Similar 11); copper ion
binding / oxidoreductase | chr3:4351401-4353289 REVERSE
Length = 554
Score = 64.3 bits (155), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPEENGETEMGPPDNVRYCG 60
VYP W AIL++ DN G+WN+R EN +R YLG + Y +++PE++ E P+ CG
Sbjct: 481 VYPKCWAAILLTFDNCGMWNVRSENSERRYLGQQLYASVLSPEKSLRDEYNMPETSLQCG 540
Query: 61 ALRSLQKTDNSAA 73
++ K + A
Sbjct: 541 LVKGTPKPNPYAG 553
>AT4G28090.1 | Symbols: sks10 | sks10 (SKU5 Similar 10); copper ion
binding / oxidoreductase | chr4:13961888-13964229
REVERSE
Length = 547
Score = 63.9 bits (154), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPEENGETEMGPPDNVRYCG 60
VYP WTA+ V+LDNVG+WNLR + R YLG + Y+R+ +P + + E P N CG
Sbjct: 476 VYPKSWTAVYVALDNVGMWNLRSQFWARQYLGQQFYLRVHSPNHSPKDEYPLPKNALLCG 535
>AT1G75790.1 | Symbols: sks18 | sks18 (SKU5 Similar 18); copper ion
binding / pectinesterase | chr1:28454980-28457388
REVERSE
Length = 545
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 16/74 (21%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPEENGETEMGP-------- 52
VYP WTAIL+++DN G+WN+R + ++WYLG E YMR+ GE E P
Sbjct: 477 VYPYSWTAILIAMDNQGMWNVRSQKAEQWYLGQELYMRV-----KGEGEEDPSTIPVRDE 531
Query: 53 ---PDNVRYCGALR 63
P NV CG +R
Sbjct: 532 NPIPGNVIRCGKVR 545
>AT1G21860.1 | Symbols: sks7 | sks7 (SKU5 Similar 7); copper ion
binding / oxidoreductase | chr1:7671028-7674215 REVERSE
Length = 538
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%)
Query: 1 VYPGGWTAILVSLDNVGVWNLRVENLDRWYLGHETYMRIINPEENGETEMGPPDNVRYCG 60
VYP WTAI ++LDNVG+WN+R E +R YLG + YMR+ + E P N CG
Sbjct: 472 VYPRSWTAIYIALDNVGMWNMRSEIWERQYLGQQFYMRVYTTSTSLRDEYLIPKNALLCG 531
Query: 61 ALRSLQK 67
S +
Sbjct: 532 RASSSHR 538