Jatropha Genome Database

JcCB0694151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0694151.10 + phase: 1 /partial
         (124 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G39290.1 | Symbols: PGPS1, PGP1, PGS1 | PGP1 (PHOSPHATIDYLGLY...   184   1e-47
AT3G55030.1 | Symbols: PGPS2 | PGPS2 (phosphatidylglycerolphosph...   172   4e-44

>AT2G39290.1 | Symbols: PGPS1, PGP1, PGS1 | PGP1
           (PHOSPHATIDYLGLYCEROLPHOSPHATE SYNTHASE 1); CDP-alcohol
           phosphatidyltransferase/
           CDP-diacylglycerol-glycerol-3-phosphate
           3-phosphatidyltransferase | chr2:16407274-16408840
           FORWARD
          Length = 296

 Score =  184 bits (466), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 96/124 (77%), Positives = 109/124 (87%), Gaps = 2/124 (1%)

Query: 1   LMVAATLVLLCTRPPEVAIFGQVPWLLTVPSILIIGREITMSAVREWAASQNSKLLEAVA 60
           LMVAATL+LLCT+P +VA  G +PWLLTVPSI IIGREITMSAVREWAASQN KLLEAVA
Sbjct: 175 LMVAATLILLCTKPIQVAELGPLPWLLTVPSIAIIGREITMSAVREWAASQNGKLLEAVA 234

Query: 61  VNNLGKWKTATQMTALTILLATRDSSLGGPGISVASVVLLYISAGLSVWSLAMYMSKIWR 120
           VNNLGKWKTATQMTALTILLA+RDS++G   +  +   LLY+SAGLSVWSLA+YM KIW+
Sbjct: 235 VNNLGKWKTATQMTALTILLASRDSNVG--WLVASGAGLLYVSAGLSVWSLAVYMRKIWK 292

Query: 121 VLLK 124
           VL+K
Sbjct: 293 VLMK 296


>AT3G55030.1 | Symbols: PGPS2 | PGPS2 (phosphatidylglycerolphosphate
           synthase 2); CDP-alcohol phosphatidyltransferase/
           CDP-diacylglycerol-glycerol-3-phosphate
           3-phosphatidyltransferase | chr3:20396860-20398224
           FORWARD
          Length = 233

 Score =  172 bits (436), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 91/124 (73%), Positives = 103/124 (83%), Gaps = 2/124 (1%)

Query: 1   LMVAATLVLLCTRPPEVAIFGQVPWLLTVPSILIIGREITMSAVREWAASQNSKLLEAVA 60
           LMVAATL+LLCT+P    + G VPWL+TVPSI IIGREITMSAVREWAASQN KL EAVA
Sbjct: 111 LMVAATLILLCTKPMVAVVLGPVPWLVTVPSIAIIGREITMSAVREWAASQNGKLSEAVA 170

Query: 61  VNNLGKWKTATQMTALTILLATRDSSLGGPGISVASVVLLYISAGLSVWSLAMYMSKIWR 120
           VN+LGKWKTATQM ALTILLA+RDSS     +  + + LLY+SAGLS+WSL +YM KIWR
Sbjct: 171 VNSLGKWKTATQMIALTILLASRDSSF--ERLLPSGIGLLYVSAGLSIWSLVVYMRKIWR 228

Query: 121 VLLK 124
           VLLK
Sbjct: 229 VLLK 232