Jatropha Genome Database

JcCB0693601.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0693601.10 + phase: 0 
         (333 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G25570.1 | Symbols:  | adenosylmethionine decarboxylase famil...   434   e-122
AT5G15950.2 | Symbols:  | adenosylmethionine decarboxylase famil...   404   e-113
AT5G15950.1 | Symbols:  | adenosylmethionine decarboxylase famil...   404   e-113
AT3G02470.4 | Symbols:  | SAMDC (S-ADENOSYLMETHIONINE DECARBOXYL...   402   e-112
AT3G02470.3 | Symbols: SAMDC | SAMDC (S-ADENOSYLMETHIONINE DECAR...   402   e-112
AT3G02470.1 | Symbols: SAMDC | SAMDC (S-ADENOSYLMETHIONINE DECAR...   402   e-112
AT5G18930.1 | Symbols: BUD2, SAMDC4 | BUD2 (BUSHY AND DWARF 2); ...   233   1e-61

>AT3G25570.1 | Symbols:  | adenosylmethionine decarboxylase family
           protein | chr3:9287413-9288462 REVERSE
          Length = 349

 Score =  434 bits (1117), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 211/313 (67%), Positives = 249/313 (79%), Gaps = 3/313 (0%)

Query: 1   MAVSAIGFEGYEKRLEITFFEPGIFVDPEGKGLRALSKAQLDEFLGPAECTIVDSLKNDH 60
           MAVSA GFEG+EKRLEI+FFE   F+DP+GK LR+L+K+QLDE L PAECTIV SL N  
Sbjct: 1   MAVSATGFEGFEKRLEISFFETTDFLDPQGKSLRSLTKSQLDEILTPAECTIVSSLTNSF 60

Query: 61  VDSYVLSESSLFIYPYKLIIKTCGXXXXXXXXXXXXXXSNALSLKVKSVRYTRGSFIFPG 120
           VDSYVLSESSLF+YPYK+IIKTCG              +++L L VKSVRYTRGSFIFPG
Sbjct: 61  VDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPHILRLADSLCLTVKSVRYTRGSFIFPG 120

Query: 121 AQSYPHRSFTEEVAVLDDYFGKLGGGSMAYVMGGSDSDSPQKWHVYSAYA--DSAISRDL 178
           AQSYPHRSF+EEVA+LDDYFGKL  GS A+VMGGSD ++PQ+WHVYSA +  +SA+    
Sbjct: 121 AQSYPHRSFSEEVALLDDYFGKLNAGSKAFVMGGSD-NNPQRWHVYSASSTEESAVCDKP 179

Query: 179 VYTVEMCMTGLDRQKAAVFFKTRSASAAVMTVDSGIRKILPDSKICDFDFDPCGYSMNSI 238
           VYT+EMCMTGLD  KA+VFFKT S SA+ MT+ SGIR ILP S+ICDF+F+PCGYSMNSI
Sbjct: 180 VYTLEMCMTGLDNIKASVFFKTNSVSASEMTISSGIRNILPGSEICDFNFEPCGYSMNSI 239

Query: 239 EGSAISTIHITPEDGFSYASFETVGYHPEEVNLNQLVDRVLSCFQPSQFSIAVHADVAGK 298
           EG A+STIH+TPEDGFSYASFETVGY  + +N  +LVDRVL CF P +FS+AVHA++  +
Sbjct: 240 EGDAVSTIHVTPEDGFSYASFETVGYDLKALNFKELVDRVLVCFGPEEFSVAVHANLGTE 299

Query: 299 QLMRTCSLDVKGY 311
            L   C  DV GY
Sbjct: 300 VLASDCVADVNGY 312


>AT5G15950.2 | Symbols:  | adenosylmethionine decarboxylase family
           protein | chr5:5206706-5207794 FORWARD
          Length = 362

 Score =  404 bits (1039), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 196/311 (63%), Positives = 246/311 (79%), Gaps = 2/311 (0%)

Query: 1   MAVSAIGFEGYEKRLEITFFEPGIFVDPEGKGLRALSKAQLDEFLGPAECTIVDSLKNDH 60
           MA+SAIGFEGYEKRLE+TFFEPG+F+D +GKGLRAL+K+Q+DE L PAECTIV SL ND 
Sbjct: 1   MAMSAIGFEGYEKRLEVTFFEPGLFLDTQGKGLRALAKSQIDEILQPAECTIVSSLSNDQ 60

Query: 61  VDSYVLSESSLFIYPYKLIIKTCGXXXXXXXXXXXXXXSNALSLKVKSVRYTRGSFIFPG 120
           +DSYVLSESSLFI+PYK++IKTCG              +  LSL VK+VRYTRGSF+ PG
Sbjct: 61  LDSYVLSESSLFIFPYKIVIKTCGTTKLLLSIEPLLRLAGELSLDVKAVRYTRGSFLCPG 120

Query: 121 AQSYPHRSFTEEVAVLDDYFGKLGGGSMAYVMGGSDSDSPQKWHVYSAYADSAISRDLVY 180
            Q +PHR+F+EEV+VLD +F KLG  S+AY+MG  + D  +KWHVYSA + ++ +++ VY
Sbjct: 121 GQPFPHRNFSEEVSVLDGHFAKLGLSSVAYLMG--NDDETKKWHVYSASSANSNNKNNVY 178

Query: 181 TVEMCMTGLDRQKAAVFFKTRSASAAVMTVDSGIRKILPDSKICDFDFDPCGYSMNSIEG 240
           T+EMCMTGLD+ KA+VF+K  S+SA  MT +SGIRKILP S+ICDF+F+PCGYSMNSIEG
Sbjct: 179 TLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSIEG 238

Query: 241 SAISTIHITPEDGFSYASFETVGYHPEEVNLNQLVDRVLSCFQPSQFSIAVHADVAGKQL 300
            AISTIH+TPEDGFSYASFE VGY    ++L+ LV +VL+CF+P QFS+AVH+ VA K  
Sbjct: 239 DAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFKPKQFSVAVHSTVAQKSY 298

Query: 301 MRTCSLDVKGY 311
               S+D+  Y
Sbjct: 299 DSGLSVDLDDY 309


>AT5G15950.1 | Symbols:  | adenosylmethionine decarboxylase family
           protein | chr5:5206706-5207794 FORWARD
          Length = 362

 Score =  404 bits (1039), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 196/311 (63%), Positives = 246/311 (79%), Gaps = 2/311 (0%)

Query: 1   MAVSAIGFEGYEKRLEITFFEPGIFVDPEGKGLRALSKAQLDEFLGPAECTIVDSLKNDH 60
           MA+SAIGFEGYEKRLE+TFFEPG+F+D +GKGLRAL+K+Q+DE L PAECTIV SL ND 
Sbjct: 1   MAMSAIGFEGYEKRLEVTFFEPGLFLDTQGKGLRALAKSQIDEILQPAECTIVSSLSNDQ 60

Query: 61  VDSYVLSESSLFIYPYKLIIKTCGXXXXXXXXXXXXXXSNALSLKVKSVRYTRGSFIFPG 120
           +DSYVLSESSLFI+PYK++IKTCG              +  LSL VK+VRYTRGSF+ PG
Sbjct: 61  LDSYVLSESSLFIFPYKIVIKTCGTTKLLLSIEPLLRLAGELSLDVKAVRYTRGSFLCPG 120

Query: 121 AQSYPHRSFTEEVAVLDDYFGKLGGGSMAYVMGGSDSDSPQKWHVYSAYADSAISRDLVY 180
            Q +PHR+F+EEV+VLD +F KLG  S+AY+MG  + D  +KWHVYSA + ++ +++ VY
Sbjct: 121 GQPFPHRNFSEEVSVLDGHFAKLGLSSVAYLMG--NDDETKKWHVYSASSANSNNKNNVY 178

Query: 181 TVEMCMTGLDRQKAAVFFKTRSASAAVMTVDSGIRKILPDSKICDFDFDPCGYSMNSIEG 240
           T+EMCMTGLD+ KA+VF+K  S+SA  MT +SGIRKILP S+ICDF+F+PCGYSMNSIEG
Sbjct: 179 TLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSIEG 238

Query: 241 SAISTIHITPEDGFSYASFETVGYHPEEVNLNQLVDRVLSCFQPSQFSIAVHADVAGKQL 300
            AISTIH+TPEDGFSYASFE VGY    ++L+ LV +VL+CF+P QFS+AVH+ VA K  
Sbjct: 239 DAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFKPKQFSVAVHSTVAQKSY 298

Query: 301 MRTCSLDVKGY 311
               S+D+  Y
Sbjct: 299 DSGLSVDLDDY 309


>AT3G02470.4 | Symbols:  | SAMDC (S-ADENOSYLMETHIONINE
           DECARBOXYLASE); adenosylmethionine decarboxylase |
           chr3:510223-511323 FORWARD
          Length = 366

 Score =  402 bits (1032), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 198/315 (62%), Positives = 240/315 (76%), Gaps = 4/315 (1%)

Query: 1   MAVSAIGFEGYEKRLEITFFEPGIFVDPEGKGLRALSKAQLDEFLGPAECTIVDSLKNDH 60
           MA+SAIGFEGYEKRLE+TFFEP IF D +G GLRAL+K+QLDE L PA CTIV SL ND 
Sbjct: 1   MALSAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSNDQ 60

Query: 61  VDSYVLSESSLFIYPYKLIIKTCGXXXXXXXXXXXXXXSNALSLKVKSVRYTRGSFIFPG 120
           +DSYVLSESS F+YPYK+IIKTCG              +  LSL VKSV+YTRGSF+ PG
Sbjct: 61  LDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPG 120

Query: 121 AQSYPHRSFTEEVAVLDDYFGKLGGGSMAYVMGGSDSDSPQKWHVYSAYA-DSAISRDLV 179
            Q +PHRSF+EEV+VLD +F +LG  S+AY+MG  + D  +KWHVY+A A DS+   + V
Sbjct: 121 GQPFPHRSFSEEVSVLDGHFTQLGLNSVAYLMG--NDDETKKWHVYAASAQDSSNCNNNV 178

Query: 180 YTVEMCMTGLDRQKAAVFFKTRSASAAVMTVDSGIRKILPDSKICDFDFDPCGYSMNSIE 239
           YT+EMCMTGLDR+KAAVF+K  +     MT +SGIRKILP S+ICDF+F+PCGYSMNSIE
Sbjct: 179 YTLEMCMTGLDREKAAVFYKDEADKTGSMTDNSGIRKILPKSEICDFEFEPCGYSMNSIE 238

Query: 240 GSAISTIHITPEDGFSYASFETVGYHPEEVNLNQLVDRVLSCFQPSQFSIAVHADVAGKQ 299
           G AISTIH+TPEDGFSYASFE VGY    ++L+QLV RVLSCF+P QFS+AVH+ V    
Sbjct: 239 GDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVGANS 298

Query: 300 LMRTCSLDVKGY-CR 313
                ++D++ Y CR
Sbjct: 299 YKPEITVDLEDYGCR 313


>AT3G02470.3 | Symbols: SAMDC | SAMDC (S-ADENOSYLMETHIONINE
           DECARBOXYLASE); adenosylmethionine decarboxylase |
           chr3:510223-511323 FORWARD
          Length = 366

 Score =  402 bits (1032), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 198/315 (62%), Positives = 240/315 (76%), Gaps = 4/315 (1%)

Query: 1   MAVSAIGFEGYEKRLEITFFEPGIFVDPEGKGLRALSKAQLDEFLGPAECTIVDSLKNDH 60
           MA+SAIGFEGYEKRLE+TFFEP IF D +G GLRAL+K+QLDE L PA CTIV SL ND 
Sbjct: 1   MALSAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSNDQ 60

Query: 61  VDSYVLSESSLFIYPYKLIIKTCGXXXXXXXXXXXXXXSNALSLKVKSVRYTRGSFIFPG 120
           +DSYVLSESS F+YPYK+IIKTCG              +  LSL VKSV+YTRGSF+ PG
Sbjct: 61  LDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPG 120

Query: 121 AQSYPHRSFTEEVAVLDDYFGKLGGGSMAYVMGGSDSDSPQKWHVYSAYA-DSAISRDLV 179
            Q +PHRSF+EEV+VLD +F +LG  S+AY+MG  + D  +KWHVY+A A DS+   + V
Sbjct: 121 GQPFPHRSFSEEVSVLDGHFTQLGLNSVAYLMG--NDDETKKWHVYAASAQDSSNCNNNV 178

Query: 180 YTVEMCMTGLDRQKAAVFFKTRSASAAVMTVDSGIRKILPDSKICDFDFDPCGYSMNSIE 239
           YT+EMCMTGLDR+KAAVF+K  +     MT +SGIRKILP S+ICDF+F+PCGYSMNSIE
Sbjct: 179 YTLEMCMTGLDREKAAVFYKDEADKTGSMTDNSGIRKILPKSEICDFEFEPCGYSMNSIE 238

Query: 240 GSAISTIHITPEDGFSYASFETVGYHPEEVNLNQLVDRVLSCFQPSQFSIAVHADVAGKQ 299
           G AISTIH+TPEDGFSYASFE VGY    ++L+QLV RVLSCF+P QFS+AVH+ V    
Sbjct: 239 GDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVGANS 298

Query: 300 LMRTCSLDVKGY-CR 313
                ++D++ Y CR
Sbjct: 299 YKPEITVDLEDYGCR 313


>AT3G02470.1 | Symbols: SAMDC | SAMDC (S-ADENOSYLMETHIONINE
           DECARBOXYLASE); adenosylmethionine decarboxylase |
           chr3:510223-511323 FORWARD
          Length = 366

 Score =  402 bits (1032), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 198/315 (62%), Positives = 240/315 (76%), Gaps = 4/315 (1%)

Query: 1   MAVSAIGFEGYEKRLEITFFEPGIFVDPEGKGLRALSKAQLDEFLGPAECTIVDSLKNDH 60
           MA+SAIGFEGYEKRLE+TFFEP IF D +G GLRAL+K+QLDE L PA CTIV SL ND 
Sbjct: 1   MALSAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSNDQ 60

Query: 61  VDSYVLSESSLFIYPYKLIIKTCGXXXXXXXXXXXXXXSNALSLKVKSVRYTRGSFIFPG 120
           +DSYVLSESS F+YPYK+IIKTCG              +  LSL VKSV+YTRGSF+ PG
Sbjct: 61  LDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPG 120

Query: 121 AQSYPHRSFTEEVAVLDDYFGKLGGGSMAYVMGGSDSDSPQKWHVYSAYA-DSAISRDLV 179
            Q +PHRSF+EEV+VLD +F +LG  S+AY+MG  + D  +KWHVY+A A DS+   + V
Sbjct: 121 GQPFPHRSFSEEVSVLDGHFTQLGLNSVAYLMG--NDDETKKWHVYAASAQDSSNCNNNV 178

Query: 180 YTVEMCMTGLDRQKAAVFFKTRSASAAVMTVDSGIRKILPDSKICDFDFDPCGYSMNSIE 239
           YT+EMCMTGLDR+KAAVF+K  +     MT +SGIRKILP S+ICDF+F+PCGYSMNSIE
Sbjct: 179 YTLEMCMTGLDREKAAVFYKDEADKTGSMTDNSGIRKILPKSEICDFEFEPCGYSMNSIE 238

Query: 240 GSAISTIHITPEDGFSYASFETVGYHPEEVNLNQLVDRVLSCFQPSQFSIAVHADVAGKQ 299
           G AISTIH+TPEDGFSYASFE VGY    ++L+QLV RVLSCF+P QFS+AVH+ V    
Sbjct: 239 GDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVGANS 298

Query: 300 LMRTCSLDVKGY-CR 313
                ++D++ Y CR
Sbjct: 299 YKPEITVDLEDYGCR 313


>AT5G18930.1 | Symbols: BUD2, SAMDC4 | BUD2 (BUSHY AND DWARF 2);
           adenosylmethionine decarboxylase | chr5:6312172-6313215
           REVERSE
          Length = 347

 Score =  233 bits (594), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 133/299 (44%), Positives = 180/299 (60%), Gaps = 13/299 (4%)

Query: 1   MAVSAIGFEGYEKRLEITFFEPGIFVDPEGKGLRALSKAQLDEFLGPAECTIVDSLKNDH 60
           MAVS  GFEG+EKRLE+ FF+    +     GLR +    LD+ L   +CT+V ++ N  
Sbjct: 1   MAVS--GFEGFEKRLELRFFDDDKPITKNPMGLRLIDFESLDQVLNEVQCTVVSAVANRS 58

Query: 61  VDSYVLSESSLFIYPYKLIIKTCGXXXXXXXXXXXXXXSNALSLKVKSVRYTRGSFIFPG 120
            D+YVLSESSLF+YP K+IIKTCG              +  L L +++ RY+RGSFIFP 
Sbjct: 59  FDAYVLSESSLFVYPTKIIIKTCGTTQLLKSIRPLIHLARNLGLTLRACRYSRGSFIFPK 118

Query: 121 AQSYPHRSFTEEVAVLDDYFGKLGGGSMAYVMGGSDSDSPQKWHVYSAYADSAISRDLVY 180
           AQ +P+ SF +EV V+++   K      A VM  S++ S + WHV++A AD   S + V 
Sbjct: 119 AQPFPYTSFKDEVIVVEESLPKSLCYRKASVMTPSNNPS-RAWHVFTASADVE-SDEHVV 176

Query: 181 TVEMCMTGLDRQKAAVFFKTR-------SASAAVMTVDSGIRKILPDSKICDFDFDPCGY 233
            VE+CMT LDR  A  FFK +        ++   MT  SGI  I  ++ ICDF FDPCGY
Sbjct: 177 VVEVCMTELDRVNARSFFKRKGDEKNNSDSAGKEMTRLSGIDNINANAYICDFAFDPCGY 236

Query: 234 SMNSIEGSAISTIHITPEDGFSYASFE--TVGYHPEEVNLNQLVDRVLSCFQPSQFSIA 290
           SMN ++G   STIH+TPEDGFSYASFE     Y     ++++++ R +  F+PS  SIA
Sbjct: 237 SMNGVDGDRYSTIHVTPEDGFSYASFECGLSLYDNGHEDISEVLSRAIDVFRPSDVSIA 295