Jatropha Genome Database

JcCB0693201.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0693201.10 - phase: 0 /partial
         (127 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G16510.2 | Symbols:  | reversibly glycosylated polypeptide, p...   185   7e-48
AT5G16510.1 | Symbols:  | reversibly glycosylated polypeptide, p...   185   7e-48
AT5G50750.1 | Symbols: RGP4 | RGP4 (REVERSIBLY GLYCOSYLATED POLY...   105   6e-24
AT5G15650.1 | Symbols: RGP2, ATRGP2 | RGP2 (REVERSIBLY GLYCOSYLA...   105   6e-24
AT3G02230.1 | Symbols: RGP1, ATRGP1 | RGP1 (REVERSIBLY GLYCOSYLA...   105   9e-24
AT3G08900.1 | Symbols: RGP3, RGP | RGP3 (REVERSIBLY GLYCOSYLATED...   104   2e-23

>AT5G16510.2 | Symbols:  | reversibly glycosylated polypeptide,
           putative | chr5:5393296-5394342 FORWARD
          Length = 348

 Score =  185 bits (469), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 82/127 (64%), Positives = 105/127 (82%)

Query: 1   MSVTNIKDNDVDIIIGALNSDLTSFFNEWRPIFSRFDLIIVKDPDLNEELKIPEGFNLNV 60
           MS+  I  N+VDI+IGALN+DLT F   WRP FS F LI+VKDP+L EEL IPEGF+++V
Sbjct: 1   MSLAEINKNEVDIVIGALNADLTQFLTSWRPFFSGFHLIVVKDPELKEELNIPEGFDVDV 60

Query: 61  YTKSHIDQVVGPSNSILFSGYSCRYFGFLMSRKKYIISVDDDCFPAKDEKDFLVNAVDQH 120
           Y+K+ +++VVG SNS +FSGYSCRYFG+L+S+KKYI+S+DDDC PAKD K FLV+AV QH
Sbjct: 61  YSKTDMEKVVGASNSTMFSGYSCRYFGYLVSKKKYIVSIDDDCVPAKDPKGFLVDAVTQH 120

Query: 121 IMNLTAP 127
           ++NL  P
Sbjct: 121 VINLENP 127


>AT5G16510.1 | Symbols:  | reversibly glycosylated polypeptide,
           putative | chr5:5393296-5394342 FORWARD
          Length = 348

 Score =  185 bits (469), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 82/127 (64%), Positives = 105/127 (82%)

Query: 1   MSVTNIKDNDVDIIIGALNSDLTSFFNEWRPIFSRFDLIIVKDPDLNEELKIPEGFNLNV 60
           MS+  I  N+VDI+IGALN+DLT F   WRP FS F LI+VKDP+L EEL IPEGF+++V
Sbjct: 1   MSLAEINKNEVDIVIGALNADLTQFLTSWRPFFSGFHLIVVKDPELKEELNIPEGFDVDV 60

Query: 61  YTKSHIDQVVGPSNSILFSGYSCRYFGFLMSRKKYIISVDDDCFPAKDEKDFLVNAVDQH 120
           Y+K+ +++VVG SNS +FSGYSCRYFG+L+S+KKYI+S+DDDC PAKD K FLV+AV QH
Sbjct: 61  YSKTDMEKVVGASNSTMFSGYSCRYFGYLVSKKKYIVSIDDDCVPAKDPKGFLVDAVTQH 120

Query: 121 IMNLTAP 127
           ++NL  P
Sbjct: 121 VINLENP 127


>AT5G50750.1 | Symbols: RGP4 | RGP4 (REVERSIBLY GLYCOSYLATED
           POLYPEPTIDE 4); transferase, transferring hexosyl groups
           | chr5:20641066-20642470 FORWARD
          Length = 364

 Score =  105 bits (263), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 79/120 (65%), Gaps = 3/120 (2%)

Query: 9   NDVDIIIGALNSDLTSFFNEWRPIFSRFDLIIVKDPDLNEELKIPEGFNLNVYTKSHIDQ 68
           +D+DI+I  + S    F  +WRP    + LIIV+D D + ++++PEG++  +Y ++ I++
Sbjct: 16  DDLDIVIPTIRS--LDFLEQWRPFLHHYHLIIVQDGDPSIKIRVPEGYDYELYNRNDINR 73

Query: 69  VVGP-SNSILFSGYSCRYFGFLMSRKKYIISVDDDCFPAKDEKDFLVNAVDQHIMNLTAP 127
           ++GP +N I +    CR FGF++S+KKYI ++DDDCF AKD     +N + QHI NL  P
Sbjct: 74  ILGPRANCISYKDGGCRCFGFMVSKKKYIYTIDDDCFVAKDPSGKDINVIAQHIKNLETP 133


>AT5G15650.1 | Symbols: RGP2, ATRGP2 | RGP2 (REVERSIBLY GLYCOSYLATED
           POLYPEPTIDE 2); transferase, transferring hexosyl groups
           | chr5:5092203-5094093 FORWARD
          Length = 360

 Score =  105 bits (262), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 82/125 (65%), Gaps = 3/125 (2%)

Query: 4   TNIKDNDVDIIIGALNSDLTSFFNEWRPIFSRFDLIIVKDPDLNEELKIPEGFNLNVYTK 63
           T +  +++DI+I  + +    F   WRP    + LIIV+D D ++++ +PEG++  +Y +
Sbjct: 15  TPLLKDELDIVIPTIRN--LDFLEMWRPFLQPYHLIIVQDGDPSKKIHVPEGYDYELYNR 72

Query: 64  SHIDQVVGPSNS-ILFSGYSCRYFGFLMSRKKYIISVDDDCFPAKDEKDFLVNAVDQHIM 122
           + I++++GP  S I F   +CR FG+++S+KKYI ++DDDCF AKD     VNA++QHI 
Sbjct: 73  NDINRILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKAVNALEQHIK 132

Query: 123 NLTAP 127
           NL  P
Sbjct: 133 NLLCP 137


>AT3G02230.1 | Symbols: RGP1, ATRGP1 | RGP1 (REVERSIBLY GLYCOSYLATED
           POLYPEPTIDE 1); cellulose synthase (UDP-forming) |
           chr3:415463-417304 FORWARD
          Length = 357

 Score =  105 bits (261), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 50/120 (41%), Positives = 79/120 (65%), Gaps = 3/120 (2%)

Query: 9   NDVDIIIGALNSDLTSFFNEWRPIFSRFDLIIVKDPDLNEELKIPEGFNLNVYTKSHIDQ 68
           +++DI+I  + +    F   WRP    + LIIV+D D ++ + +PEGF+  +Y ++ I++
Sbjct: 20  DELDIVIPTIRN--LDFLEMWRPFLQPYHLIIVQDGDPSKTIAVPEGFDYELYNRNDINR 77

Query: 69  VVGPSNS-ILFSGYSCRYFGFLMSRKKYIISVDDDCFPAKDEKDFLVNAVDQHIMNLTAP 127
           ++GP  S I F   +CR FG+++S+KKYI ++DDDCF AKD     VNA++QHI NL  P
Sbjct: 78  ILGPKASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVAKDPSGKAVNALEQHIKNLLCP 137


>AT3G08900.1 | Symbols: RGP3, RGP | RGP3 (REVERSIBLY GLYCOSYLATED
           POLYPEPTIDE 3); transferase, transferring hexosyl groups
           | chr3:2708347-2709714 REVERSE
          Length = 362

 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 83/125 (66%), Gaps = 3/125 (2%)

Query: 4   TNIKDNDVDIIIGALNSDLTSFFNEWRPIFSRFDLIIVKDPDLNEELKIPEGFNLNVYTK 63
           T +  +++DI+I  + +    F   WRP F ++ LIIV+D D ++ + IP GF+  +Y +
Sbjct: 11  TPMLKDELDIVIPTIRN--LDFLEMWRPFFEQYHLIIVQDGDPSKVINIPVGFDYELYNR 68

Query: 64  SHIDQVVGPSNS-ILFSGYSCRYFGFLMSRKKYIISVDDDCFPAKDEKDFLVNAVDQHIM 122
           + I++++GP  S I F   +CR FG+++S+KKYI ++DDDCF AKD     +NA++QHI 
Sbjct: 69  NDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGKEINALEQHIK 128

Query: 123 NLTAP 127
           NL +P
Sbjct: 129 NLLSP 133