Jatropha Genome Database
- JcCB0689281.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0689281.10 - phase: 0 /partial
(267 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G57070.1 | Symbols: | glutaredoxin family protein | chr3:211... 188 4e-48
AT2G41330.1 | Symbols: | glutaredoxin family protein | chr2:172... 165 3e-41
AT5G13810.1 | Symbols: | glutaredoxin family protein | chr5:445... 90 1e-18
AT5G39865.1 | Symbols: | glutaredoxin family protein | chr5:159... 81 7e-16
AT3G28850.1 | Symbols: | glutaredoxin family protein | chr3:108... 75 5e-14
AT1G32760.1 | Symbols: | glutaredoxin family protein | chr1:118... 63 1e-10
AT4G10630.1 | Symbols: | glutaredoxin family protein | chr4:656... 63 2e-10
AT5G03870.1 | Symbols: | glutaredoxin family protein | chr5:103... 61 9e-10
AT5G58530.1 | Symbols: | glutaredoxin family protein | chr5:236... 57 1e-08
AT5G01420.1 | Symbols: | glutaredoxin family protein | chr5:174... 56 3e-08
AT1G64500.1 | Symbols: | glutaredoxin family protein | chr1:239... 55 6e-08
AT5G06470.1 | Symbols: | glutaredoxin family protein | chr5:197... 52 6e-07
AT3G11773.1 | Symbols: | electron carrier/ protein disulfide ox... 51 9e-07
>AT3G57070.1 | Symbols: | glutaredoxin family protein |
chr3:21124174-21125427 FORWARD
Length = 417
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 163/293 (55%), Gaps = 41/293 (13%)
Query: 3 RALSLQTPLVHHPPSRKGDSHHXXXXXXXXXXXXXXIEPITHPKFPDQTQSPQKSTINSN 62
RA S TPLVHHPP+RKGDSHH ++ Q+ + +I+
Sbjct: 39 RAFSFPTPLVHHPPARKGDSHHLVSLTSTSYGSLLLLDLDGSKNSSSDQQTLPRISISGK 98
Query: 63 KTLIPADPGESLSPDSVINTWELMDGLD-ELDFEMGXXXXXXXXXXXDDYVLISPKSNSF 121
T P +SPDSVINTWELMDGLD E +FE+ D+ K +
Sbjct: 99 NTPDP------VSPDSVINTWELMDGLDDEFEFEI----PKPGKRLNSDFC---SKPDPN 145
Query: 122 HHLGFDESVKKLNDSFDFVKSEEIEVD---KSFSLSKPLWKHLSEESFLSNMDPNVVSSY 178
++ + S KL++S++ V+ EE + D ++ +PLWKHLSEESFLS++DP++VSSY
Sbjct: 146 RNVSLNGSSLKLDESYEIVRIEEDDGDWVPLTYKPKQPLWKHLSEESFLSDLDPSIVSSY 205
Query: 179 RRALSSRQLGYTKESKS----IKSVGSSPINSS--------------------FKNGFIF 214
++ALSS+ L +++ KS+ SP ++ K
Sbjct: 206 KKALSSKLLSNHSNTRNPHRPTKSLSCSPSSNPSILISEEPKSVSSSQLISSPAKPRLPG 265
Query: 215 QDNKIVLYYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQS 267
++KIVLY+T+LRGIRKTYEDCC VR I RG +V VDERDISMDS YRKELQS
Sbjct: 266 TEDKIVLYFTTLRGIRKTYEDCCCVRAILRGVQVSVDERDISMDSKYRKELQS 318
>AT2G41330.1 | Symbols: | glutaredoxin family protein |
chr2:17227067-17228275 FORWARD
Length = 402
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 157/295 (53%), Gaps = 54/295 (18%)
Query: 1 MPRALSLQTPLVHHPPSRKGDSHHXXXXXXXXXXXXXXIEPITHPKFPDQTQSPQKSTIN 60
+P+A + P +HHPP++KGD+HH D+ P S
Sbjct: 36 VPKAFTFPMPSIHHPPAKKGDTHHFVSLTSTTYGSLV---------LDDRQTLPHISVSG 86
Query: 61 SNKTLIPA--DPGESLSPDSVINTWELMDGLDELDFEMGXXXXXXXXXXXDDYVLISPKS 118
+ +P + +S SPDSVINTWELM+ LD+ +F+ + KS
Sbjct: 87 KSNKKMPETEEARDSFSPDSVINTWELMNDLDD-EFDSANSD--------------TSKS 131
Query: 119 NSFHHL-GFDESVKK----LNDS-FDFVKSEEIEVDKSFSLSKPLWKHLSEESFLSNMDP 172
NS +L F + + +N S + + EE F +PLWKH+SEESFLS++DP
Sbjct: 132 NSVVNLDSFSKPITNRDVVINGSAYGSYEDEEDWRLLPFKPKQPLWKHMSEESFLSDLDP 191
Query: 173 NVVSSYRRALSSRQLGYTKESKSIKSVGSSPIN-----------------SSFKNGFIFQ 215
N++SSY+RALSS+QLG K S + S S ++ K + +
Sbjct: 192 NIISSYKRALSSKQLG--KNSSNGHSNHSVLVSLPEYVSSSPLSSQTSEKDQEKPRLLEK 249
Query: 216 D---NKIVLYYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQS 267
+ NKIV+Y+TSLRGIRKTYEDCC VR I RGF+V V+ERDISMDS YRKELQ+
Sbjct: 250 EDNENKIVVYFTSLRGIRKTYEDCCCVRAILRGFQVAVEERDISMDSKYRKELQN 304
>AT5G13810.1 | Symbols: | glutaredoxin family protein |
chr5:4455769-4456593 FORWARD
Length = 274
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 48/51 (94%)
Query: 216 DNKIVLYYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQ 266
+++IV+Y+TSLRGIR+TYEDC AVRMIFRGFRV +DERD+SMD +YRKELQ
Sbjct: 126 EDRIVVYFTSLRGIRRTYEDCYAVRMIFRGFRVWIDERDVSMDIAYRKELQ 176
>AT5G39865.1 | Symbols: | glutaredoxin family protein |
chr5:15965560-15966732 REVERSE
Length = 390
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 105/223 (47%), Gaps = 79/223 (35%)
Query: 57 STINSN------KTLIPADPGESLSPDSVINTWELMDGLDELDFEMGXXXXXXXXXXXDD 110
STIN KT I PGE P++ INTWELM+GL++
Sbjct: 118 STINEKIPKIVAKTPIVTPPGE---PET-INTWELMEGLED------------------- 154
Query: 111 YVLISPKSNSFHHLGFDESVKKLNDSFDFVKSE-----EIEVDKSFSLSKPLW-KHLSEE 164
+SP + H F SFDFV+ + + +V SF L K + +++
Sbjct: 155 ---VSPLRSPNHLRSF---------SFDFVRIQPSHDHDHDVAVSFDLPKSRFHENVKSS 202
Query: 165 SFLSNMDP-NVVSSYRRALSSRQLGYTKESKSIKSVGSSPINSSFKNGFIFQDNKIVLYY 223
+ ++DP ++VS ++R K++G ++VLY+
Sbjct: 203 CRVDDLDPPDIVSRFKR----------------KTLGKE---------------RVVLYF 231
Query: 224 TSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQ 266
TSLRGIRKTYEDCC +R+I + + +DERD+SM S ++ EL+
Sbjct: 232 TSLRGIRKTYEDCCNIRIILKSLGIRIDERDVSMHSGFKDELK 274
>AT3G28850.1 | Symbols: | glutaredoxin family protein |
chr3:10848669-10849955 FORWARD
Length = 428
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 99/217 (45%), Gaps = 59/217 (27%)
Query: 63 KTLIPADPGESLSPDSVINTWELMDGLDELDFEMGXXXXXXXXXXXDDYVLISPKSNSFH 122
KT I PGE P++ INTWE+MDGL+++ +SP + H
Sbjct: 130 KTPIVTPPGE---PET-INTWEMMDGLEDV---------------------LSPLRSPNH 164
Query: 123 HLGFDESVKKLNDSFDFVKSEEIEVDKSFSLSKPLWKHLSEESFLSNMD-PNVVSSYRRA 181
F SFD + KS KP+W + EE P ++SS+R++
Sbjct: 165 VKSF---------SFDVGPNG----GKSNGSVKPVWLQMEEEEEGFEDFDPEIISSFRKS 211
Query: 182 LSSRQLGYTKESKSIKSVGSSPINSSFKNGFIFQD------------NKIVLYYTSLRGI 229
L +E S S + K F F D +++LY+TSLRGI
Sbjct: 212 L--------QELPSDHPFHISNHDFELKPRFNFSDEEKEEEEQSVGKERVILYFTSLRGI 263
Query: 230 RKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQ 266
RKTYE+ C VR+I + + VDERD+SM S ++ EL+
Sbjct: 264 RKTYEESCDVRVILKSLGIRVDERDVSMHSGFKDELK 300
>AT1G32760.1 | Symbols: | glutaredoxin family protein |
chr1:11858251-11859195 FORWARD
Length = 314
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 216 DNKIVLYYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQS 267
+N++V+Y TSLRG+R+T+E C AVR F V V ERD+SMD +R+EL +
Sbjct: 160 ENRVVIYTTSLRGVRRTFEACNAVRAAIESFGVVVCERDVSMDRGFREELSN 211
>AT4G10630.1 | Symbols: | glutaredoxin family protein |
chr4:6566625-6567629 REVERSE
Length = 334
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 216 DNKIVLYYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQS 267
+N++V+Y TSLRG+R+T+E C AVR F V V ERD+SMD +R+EL S
Sbjct: 175 ENRVVMYTTSLRGVRQTFEACNAVRAAVESFGVVVCERDVSMDRRFREELVS 226
>AT5G03870.1 | Symbols: | glutaredoxin family protein |
chr5:1035813-1036967 REVERSE
Length = 384
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 20/110 (18%)
Query: 171 DPNVVSSYRRALSSRQLGYTKESKSIKSVGSSPINSSFKNGFIFQ-------------DN 217
DP++V+SY R LS +E + IK V S ++ S K + ++
Sbjct: 185 DPDLVASYERELS-------QEKEQIKMVISPVVHESRKTEKTERILEKFPEKCPPGGEH 237
Query: 218 KIVLYYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQS 267
+V+Y T+LRGIRKT+EDC VR I V ERD+SM S +++E++
Sbjct: 238 SVVIYITTLRGIRKTFEDCNVVRSILDSHEVRFSERDVSMHSVFKEEIRG 287
>AT5G58530.1 | Symbols: | glutaredoxin family protein |
chr5:23660428-23661249 FORWARD
Length = 273
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 216 DNKIVLYYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQ 266
+ IV+Y+TSLR +R T+E C +V I F V +DERD+SMD+S+ ELQ
Sbjct: 112 EKSIVVYFTSLRVVRPTFEACKSVTSILHSFPVRIDERDLSMDASFSTELQ 162
>AT5G01420.1 | Symbols: | glutaredoxin family protein |
chr5:174886-176091 REVERSE
Length = 401
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 219 IVLYYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQ 266
+V Y T+LRGIRKT++DC +R + F+V ERD+SM YR+EL+
Sbjct: 258 VVFYTTTLRGIRKTFDDCNMIRFLLDSFKVKYYERDVSMHREYREELR 305
>AT1G64500.1 | Symbols: | glutaredoxin family protein |
chr1:23953270-23954376 FORWARD
Length = 368
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 219 IVLYYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKELQ 266
+++Y TSL+G+R+TYEDC VR I V VDERD+S+D+ EL+
Sbjct: 214 LIVYTTSLQGVRRTYEDCMRVRAIMEQQGVVVDERDVSLDAGVLSELK 261
>AT5G06470.1 | Symbols: | glutaredoxin family protein |
chr5:1974659-1975378 REVERSE
Length = 239
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 216 DNKIVLYYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKEL 265
++ +V Y T LR +RKT+E C VR + +V ERD+SMDS +R+E+
Sbjct: 88 EDSVVFYTTGLRSVRKTFEACRRVRFLLENHQVMYRERDVSMDSEFREEM 137
>AT3G11773.1 | Symbols: | electron carrier/ protein disulfide
oxidoreductase | chr3:3722989-3723441 REVERSE
Length = 150
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 219 IVLYYTSLRGIRKTYEDCCAVRMIFRGFRVPVDERDISMDSSYRKEL 265
+ TSLRG+RKT+EDC VR + + ERD+SMD Y++E+
Sbjct: 9 CCFFTTSLRGVRKTFEDCRRVRFLLENHKASFRERDVSMDCEYKEEM 55