Jatropha Genome Database

JcCB0687271.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0687271.10 - phase: 1 /partial
         (227 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G54610.1 | Symbols: HAT1, GCN5, HAG1, HAC3, HAG01, BGT | GCN5...   191   3e-49

>AT3G54610.1 | Symbols: HAT1, GCN5, HAG1, HAC3, HAG01, BGT | GCN5;
           DNA binding / H3 histone acetyltransferase/ histone
           acetyltransferase | chr3:20213593-20217375 FORWARD
          Length = 568

 Score =  191 bits (485), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 104/178 (58%), Positives = 117/178 (65%), Gaps = 20/178 (11%)

Query: 34  MRTFTAARLQTNXXXXXXXXXXXXXXXXXXRNTKLKAENSTVKIEKSDXXXXXXXXXXXX 93
           +RTFTAARL ++                  RNTKLK E+STVK+E SD            
Sbjct: 119 IRTFTAARLDSSSGVNGSS-----------RNTKLKTESSTVKLESSDGGKDGGSSVVGT 167

Query: 94  XXXXXXXS------VPSLSKEDAVKIFTENLQTSGAYSAREENLKREEEAGRLKFVCLSN 147
                         VP   K+++VK+  EN QTSGAY AREE LKREE+AGRLKFVC SN
Sbjct: 168 GVSGTVGGSSISGLVP---KDESVKVLAENFQTSGAYIAREEALKREEQAGRLKFVCYSN 224

Query: 148 DGIDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRHNHVVGGITYRPY 205
           D IDEHM+ LIGLKNIFARQLPNMPKEYIVRL+MDR HKSVMV+R N VVGGITYRPY
Sbjct: 225 DSIDEHMMCLIGLKNIFARQLPNMPKEYIVRLLMDRKHKSVMVLRGNLVVGGITYRPY 282