Jatropha Genome Database

JcCB0684261.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0684261.10 - phase: 0 /TE/partial
         (1049 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   222   1e-57
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   125   2e-28
ATMG00240.1 | Symbols: ORF111A | hypothetical protein | chrM:689...    58   4e-08

>AT4G23160.1 | Symbols:  | protein kinase family protein |
            chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  222 bits (565), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 119/353 (33%), Positives = 188/353 (53%), Gaps = 4/353 (1%)

Query: 654  HGELKEDVFVEQPKGYVKRGNEQL----VYKLNKALYGLKXAPRAWFSRIEAYFIKEGFE 709
            +G+L E+++++ P GY  R  + L    V  L K++YGLK A R WF +     I  GF 
Sbjct: 201  NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 260

Query: 710  SSSSEHTLFVKRKGGNILIVSVYVDDLFFTSNDELLLGEFKCFMKREFDMTDLGQMRFFL 769
             S S+HT F+K      L V VYVDD+   SN++  + E K  +K  F + DLG +++FL
Sbjct: 261  QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 320

Query: 770  GIEVIQRSDGIFICQRKYAAEVLKRFEVENFNSVCNPIVPEQKISKDENGVQVDATLYKQ 829
            G+E+ + + GI ICQRKYA ++L    +        P+ P    S    G  VDA  Y++
Sbjct: 321  GLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRR 380

Query: 830  IVGSLMYLAATRPNLMFVVSLISRFMACPMQLHFAAAKRVLRYLKGTINFGVFYKRGGIS 889
            ++G LMYL  TR ++ F V+ +S+F   P   H  A  ++L Y+KGT+  G+FY      
Sbjct: 381  LIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEM 440

Query: 890  ELIGFTDSDYVGDMEDSKSTSGYVFMMSEGAVAWSSRKQPIVTLSTIXXXXXXXXXXXXX 949
            +L  F+D+ +    +  +ST+GY   +    ++W S+KQ +V+ S+              
Sbjct: 441  QLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDE 500

Query: 950  XXWMRRILREIGHLQAEGTKLMCDNASTIKLSKNPVLHGRSKHIRVRFHFLRD 1002
              W+ +  RE+    ++ T L CDN + I ++ N V H R+KHI    H +R+
Sbjct: 501  MMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
           chrM:227709-228431 REVERSE
          Length = 240

 Score =  125 bits (314), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 110/205 (53%), Gaps = 1/205 (0%)

Query: 731 VYVDDLFFTSNDELLLGEFKCFMKREFDMTDLGQMRFFLGIEVIQRSDGIFICQRKYAAE 790
           +YVDD+  T +   LL      +   F M DLG + +FLGI++     G+F+ Q KYA +
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 791 VLKRFEVENFNSVCNPIVPEQKISKDENGVQVDATLYKQIVGSLMYLAATRPNLMFVVSL 850
           +L    + +   +  P+ P +  S        D + ++ IVG+L YL  TRP++ + V++
Sbjct: 65  ILNNAGMLDCKPMSTPL-PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 123

Query: 851 ISRFMACPMQLHFAAAKRVLRYLKGTINFGVFYKRGGISELIGFTDSDYVGDMEDSKSTS 910
           + + M  P    F   KRVLRY+KGTI  G++  +     +  F DSD+ G     +ST+
Sbjct: 124 VCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTT 183

Query: 911 GYVFMMSEGAVAWSSRKQPIVTLST 935
           G+   +    ++WS+++QP V+ S+
Sbjct: 184 GFCTFLGCNIISWSAKRQPTVSRSS 208


>ATMG00240.1 | Symbols: ORF111A | hypothetical protein |
           chrM:68918-69253 REVERSE
          Length = 111

 Score = 57.8 bits (138), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/78 (35%), Positives = 43/78 (55%)

Query: 835 MYLAATRPNLMFVVSLISRFMACPMQLHFAAAKRVLRYLKGTINFGVFYKRGGISELIGF 894
           MYL  TRP+L F V+ +S+F +        A  +VL Y+KGT+  G+FY      +L  F
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 895 TDSDYVGDMEDSKSTSGY 912
            DSD+    +  +S +G+
Sbjct: 61  ADSDWASCPDTRRSVTGF 78