Jatropha Genome Database

JcCB0682701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0682701.10 - phase: 0 /partial
         (98 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G06925.1 | Symbols: ATSPLA2-ALPHA, PLA2-ALPHA | PLA2-ALPHA; p...   139   4e-34
AT4G29460.1 | Symbols:  | phospholipase A2 gamma, secretory low ...    70   2e-13
AT2G19690.1 | Symbols: PLA2-BETA | PLA2-BETA (PHOSPHOLIPASE A2-B...    70   3e-13
AT4G29470.1 | Symbols:  | phospholipase A2, putative | chr4:1448...    70   4e-13

>AT2G06925.1 | Symbols: ATSPLA2-ALPHA, PLA2-ALPHA | PLA2-ALPHA;
          phospholipase A2 | chr2:2842475-2843212 REVERSE
          Length = 148

 Score =  139 bits (350), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 62/75 (82%), Positives = 69/75 (92%)

Query: 24 VPIHALNIGVQRADASVSVSKECSRKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGL 83
          V + ALN+GVQ    S+S++KECSRKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGL
Sbjct: 16 VSVSALNVGVQLIHPSISLTKECSRKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGL 75

Query: 84 DACCMKHDACVQAKN 98
          D+CCMKHDACVQ+KN
Sbjct: 76 DSCCMKHDACVQSKN 90


>AT4G29460.1 | Symbols:  | phospholipase A2 gamma, secretory low
          molecular weight | chr4:14483066-14483930 REVERSE
          Length = 187

 Score = 70.5 bits (171), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/60 (56%), Positives = 41/60 (68%), Gaps = 1/60 (1%)

Query: 38 ASVSVSKECSRKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGLDACCMKHDACVQAK 97
          A VS  ++CS  C ++ C+    +RYGKYCG+ Y GCPGE PCD LDACCM HD CV  K
Sbjct: 21 AVVSSQEKCSNTCIAQNCNSLG-IRYGKYCGIGYFGCPGEPPCDDLDACCMTHDNCVDLK 79


>AT2G19690.1 | Symbols: PLA2-BETA | PLA2-BETA (PHOSPHOLIPASE
          A2-BETA); calcium ion binding / phospholipase A2 |
          chr2:8503326-8504549 FORWARD
          Length = 147

 Score = 70.1 bits (170), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 1/58 (1%)

Query: 38 ASVSVSKECSRKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGLDACCMKHDACVQ 95
            V+ S+EC+R C ++ C     +RYGKYCG+ +SGCPGE PCD LDACC  HD CV+
Sbjct: 23 VGVARSEECTRTCIAQNCDTLS-IRYGKYCGIGHSGCPGEEPCDDLDACCKIHDHCVE 79


>AT4G29470.1 | Symbols:  | phospholipase A2, putative |
          chr4:14484591-14485714 REVERSE
          Length = 191

 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 1/70 (1%)

Query: 28 ALNIGVQRADASVSVSKECSRKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGLDACC 87
          AL + V    A V   ++CS+ C ++ C+V   +RYGKYCG+ Y GCPGE PCD LD CC
Sbjct: 11 ALGLTVFLLLAVVHSQEKCSKTCIAQKCNVLG-IRYGKYCGIGYFGCPGEPPCDDLDDCC 69

Query: 88 MKHDACVQAK 97
          M HD CV  K
Sbjct: 70 MTHDNCVDLK 79