Jatropha Genome Database

JcCB0652791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0652791.10 - phase: 1 /partial
         (296 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G65720.1 | Symbols: ATNIFS1, NIFS1, NFS1, ATNFS1 | NFS1; ATP ...   433   e-122
AT5G65720.2 | Symbols: ATNIFS1, NIFS1, NFS1, ATNFS1 | NFS1; ATP ...   299   2e-81
AT1G08490.1 | Symbols: ATSUFS, SUFS, ATCPNIFS, ATNFS2, CPNIFS | ...   111   4e-25

>AT5G65720.1 | Symbols: ATNIFS1, NIFS1, NFS1, ATNFS1 | NFS1; ATP
           binding / cysteine desulfurase/ transaminase |
           chr5:26296349-26297710 FORWARD
          Length = 453

 Score =  433 bits (1114), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 195/251 (77%), Positives = 229/251 (91%), Gaps = 1/251 (0%)

Query: 46  EDQGVITVKGVKISARPLYLDMQATSPVDPRVLDAMLPYYLARFGNPHSRTHLYGWESDS 105
           ED+ ++ +KGV+IS RPLYLDMQAT+P+DPRV DAM    +  +GNPHSRTHLYGWE+++
Sbjct: 39  EDESIM-MKGVRISGRPLYLDMQATTPIDPRVFDAMNASQIHEYGNPHSRTHLYGWEAEN 97

Query: 106 AVETARSQVAELIGASPKEIVFTSGATESNNISIKGVMKFYKEKKRHVVTTQTEHKCVLD 165
           AVE AR+QVA+LI ASPKEIVF SGATE+NN+++KGVM FYK+ K+HV+TTQTEHKCVLD
Sbjct: 98  AVENARNQVAKLIEASPKEIVFVSGATEANNMAVKGVMHFYKDTKKHVITTQTEHKCVLD 157

Query: 166 SCRHLQQEGFEVTYLPVRNDGIVDLEKLRSAIRPDTGLVSVMAVNNEIGVIQPMEEIGKI 225
           SCRHLQQEGFEVTYLPV+ DG+VDLE LR AIRPDTGLVS+MAVNNEIGV+QPMEEIG I
Sbjct: 158 SCRHLQQEGFEVTYLPVKTDGLVDLEMLREAIRPDTGLVSIMAVNNEIGVVQPMEEIGMI 217

Query: 226 CKEFNVPFHTDAAQALGKIPIDVEKWNVSLMSLSGHKIYGPKGIGALYMRRRPRIRVEPQ 285
           CKE NVPFHTDAAQA+GKIP+DV+KWNV+LMS+S HKIYGPKG+GALY+RRRPRIR+EP 
Sbjct: 218 CKEHNVPFHTDAAQAIGKIPVDVKKWNVALMSMSAHKIYGPKGVGALYVRRRPRIRLEPL 277

Query: 286 MNGGGQERGIR 296
           MNGGGQERG+R
Sbjct: 278 MNGGGQERGLR 288


>AT5G65720.2 | Symbols: ATNIFS1, NIFS1, NFS1, ATNFS1 | NFS1; ATP
           binding / cysteine desulfurase/ transaminase |
           chr5:26296733-26297710 FORWARD
          Length = 325

 Score =  299 bits (765), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 132/160 (82%), Positives = 151/160 (94%)

Query: 137 ISIKGVMKFYKEKKRHVVTTQTEHKCVLDSCRHLQQEGFEVTYLPVRNDGIVDLEKLRSA 196
           +++KGVM FYK+ K+HV+TTQTEHKCVLDSCRHLQQEGFEVTYLPV+ DG+VDLE LR A
Sbjct: 1   MAVKGVMHFYKDTKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKTDGLVDLEMLREA 60

Query: 197 IRPDTGLVSVMAVNNEIGVIQPMEEIGKICKEFNVPFHTDAAQALGKIPIDVEKWNVSLM 256
           IRPDTGLVS+MAVNNEIGV+QPMEEIG ICKE NVPFHTDAAQA+GKIP+DV+KWNV+LM
Sbjct: 61  IRPDTGLVSIMAVNNEIGVVQPMEEIGMICKEHNVPFHTDAAQAIGKIPVDVKKWNVALM 120

Query: 257 SLSGHKIYGPKGIGALYMRRRPRIRVEPQMNGGGQERGIR 296
           S+S HKIYGPKG+GALY+RRRPRIR+EP MNGGGQERG+R
Sbjct: 121 SMSAHKIYGPKGVGALYVRRRPRIRLEPLMNGGGQERGLR 160


>AT1G08490.1 | Symbols: ATSUFS, SUFS, ATCPNIFS, ATNFS2, CPNIFS |
           CPNIFS (CHLOROPLASTIC NIFS-LIKE CYSTEINE DESULFURASE);
           cysteine desulfurase/ selenocysteine lyase/ transaminase
           | chr1:2685980-2688547 REVERSE
          Length = 463

 Score =  111 bits (278), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 113/232 (48%), Gaps = 2/232 (0%)

Query: 60  ARPLYLDMQATSPVDPRVLDAMLPYYLARFGNPHSRTHLYGWESDSAVETARSQVAELIG 119
           ++ +YLD  ATS     VLDA+  YY     N H   H    ++    E AR +VA  I 
Sbjct: 71  SKLVYLDSAATSQKPAAVLDALQNYYEFYNSNVHRGIHYLSAKATDEFELARKKVARFIN 130

Query: 120 AS-PKEIVFTSGATESNN-ISIKGVMKFYKEKKRHVVTTQTEHKCVLDSCRHLQQEGFEV 177
           AS  +EIVFT  ATE+ N ++    +   K     ++T    H C++      Q+ G  +
Sbjct: 131 ASDSREIVFTRNATEAINLVAYSWGLSNLKPGDEVILTVAEHHSCIVPWQIVSQKTGAVL 190

Query: 178 TYLPVRNDGIVDLEKLRSAIRPDTGLVSVMAVNNEIGVIQPMEEIGKICKEFNVPFHTDA 237
            ++ +  D + D+ KLR  I P T LV+V  V+N +    P+EEI     +       DA
Sbjct: 191 KFVTLNEDEVPDINKLRELISPKTKLVAVHHVSNVLASSLPIEEIVVWAHDVGAKVLVDA 250

Query: 238 AQALGKIPIDVEKWNVSLMSLSGHKIYGPKGIGALYMRRRPRIRVEPQMNGG 289
            Q++  + +DV+K N   +  S HK+ GP GIG LY +      + P + GG
Sbjct: 251 CQSVPHMVVDVQKLNADFLVASSHKMCGPTGIGFLYGKSDLLHSMPPFLGGG 302