Jatropha Genome Database

JcCB0643441.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0643441.10 - phase: 0 /partial
         (113 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G34370.1 | Symbols: ATARI1, ARI1 | ARI1 (ARIADNE); protein bi...   120   2e-28
AT2G16090.1 | Symbols: ATARI12, ARI12 | zinc finger protein-rela...   114   1e-26
AT3G27710.1 | Symbols: ATARI13, ARI13 | zinc finger protein-rela...    91   2e-19
AT3G27720.1 | Symbols: ATARI14, ARI14 | zinc finger protein-rela...    88   1e-18

>AT4G34370.1 | Symbols: ATARI1, ARI1 | ARI1 (ARIADNE); protein
           binding / zinc ion binding | chr4:16434547-16437037
           FORWARD
          Length = 597

 Score =  120 bits (300), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/118 (52%), Positives = 84/118 (71%), Gaps = 8/118 (6%)

Query: 1   PFEQYADDKVWKIRMQVINLTAVTDTLCKKMYECIESDLLGSLQLGTHNIAPYKSKGIEK 60
           PF+++++DKV  IR+Q+INL+   DTLCKKMYECIE+DLLGSLQLG HNI+PY+SKGIE+
Sbjct: 461 PFDEFSNDKVMAIRIQIINLSVAVDTLCKKMYECIENDLLGSLQLGIHNISPYRSKGIEQ 520

Query: 61  ASELSSCWSNKVNATHKFLTSDGNASGGISELD-----RPSDDSGC-SSRKRARKEGG 112
           A++  + W++K     KF   D   SG  S  +     R S+D+ C SS+KR +KEG 
Sbjct: 521 AAQFYASWNSK--DADKFQPLDSGTSGVTSRPEQASGSRSSEDTICSSSQKRPKKEGS 576


>AT2G16090.1 | Symbols: ATARI12, ARI12 | zinc finger protein-related
           | chr2:6987367-6989822 REVERSE
          Length = 593

 Score =  114 bits (285), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/113 (53%), Positives = 75/113 (66%), Gaps = 11/113 (9%)

Query: 1   PFEQYADDKVWKIRMQVINLTAVTDTLCKKMYECIESDLLGSLQLGTHNIAPYKSKGIEK 60
           PF+Q+ADDKV +IR+QVINL+   DTLC+ MYECIE+DLLGSLQLG HNI PY+S GIE+
Sbjct: 462 PFDQFADDKVMQIRIQVINLSVAVDTLCENMYECIENDLLGSLQLGIHNITPYRSNGIER 521

Query: 61  ASELSSCWSNKVNATHKFLTSDGNASGGISELDRP-----SDDSGCSSRKRAR 108
           AS+  S      +   K      +  G  S LD+      S+D+ CSS KRAR
Sbjct: 522 ASDFYS------SQNSKEAVGQSSDCGWTSRLDQALESGKSEDTSCSSGKRAR 568


>AT3G27710.1 | Symbols: ATARI13, ARI13 | zinc finger protein-related
           | chr3:10269304-10270917 FORWARD
          Length = 537

 Score = 90.5 bits (223), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 38/66 (57%), Positives = 52/66 (78%)

Query: 1   PFEQYADDKVWKIRMQVINLTAVTDTLCKKMYECIESDLLGSLQLGTHNIAPYKSKGIEK 60
           PF++Y  +KV ++   + NLTAV D LCK+MYECIE++LLG +Q G HNIAPY+SKGIE+
Sbjct: 461 PFDEYDHEKVVEMMRHLTNLTAVVDNLCKEMYECIENELLGPIQFGNHNIAPYRSKGIEQ 520

Query: 61  ASELSS 66
           A+E  +
Sbjct: 521 ATEFCA 526


>AT3G27720.1 | Symbols: ATARI14, ARI14 | zinc finger protein-related
           | chr3:10271876-10273621 FORWARD
          Length = 493

 Score = 88.2 bits (217), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 39/66 (59%), Positives = 52/66 (78%)

Query: 1   PFEQYADDKVWKIRMQVINLTAVTDTLCKKMYECIESDLLGSLQLGTHNIAPYKSKGIEK 60
           PF++Y  +KV ++   + NLTAV D LCK+MYECIE++LLG L  G HNIAPY+SKGIE+
Sbjct: 421 PFDEYDHEKVVEMMRHLTNLTAVVDNLCKEMYECIENELLGPLISGIHNIAPYRSKGIEQ 480

Query: 61  ASELSS 66
           A+E S+
Sbjct: 481 AAEFSA 486