Jatropha Genome Database

JcCB0619401.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0619401.10 + phase: 0 /TE/partial
         (602 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.1 | Symbols:  | protein kinase family protein | chr4:1...   304   8e-83
ATMG00810.1 | Symbols: ORF240B | hypothetical protein | chrM:227...   116   3e-26
ATMG00820.1 | Symbols: ORF170 | hypothetical protein | chrM:2285...    86   9e-17

>AT4G23160.1 | Symbols:  | protein kinase family protein |
           chr4:12129485-12134086 FORWARD
          Length = 1262

 Score =  304 bits (779), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 170/487 (34%), Positives = 274/487 (56%), Gaps = 29/487 (5%)

Query: 80  LAQGGEPENYQEAMEDCKRNEWWKAMQDEMESLHENRTYELVKLPQGKKALKNKWVFRLK 139
           +A+  EP  Y EA E      W  AM DE+ ++    T+E+  LP  KK +  KWV+++K
Sbjct: 80  IAKAKEPSTYNEAKEFLV---WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIK 136

Query: 140 TEQNNSQPRYKARLVVKGFGQKKGVDFEEIFSPVVKMSSIRVVLGLAASLNLEIEQLDVK 199
              + +  RYKARLV KG+ Q++G+DF E FSPV K++S++++L ++A  N  + QLD+ 
Sbjct: 137 YNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDIS 196

Query: 200 TAFLHGDLEKEIYMEQPEGFK--------------LQKSLYGLKQAPRQWYKKFDSFMVN 245
            AFL+GDL++EIYM+ P G+               L+KS+YGLKQA RQW+ KF   ++ 
Sbjct: 197 NAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIG 256

Query: 246 HGYEKTTSNHCVFVKRFEDGDFIILLLYVDDMLIVGHDAKKIESLKKELGKSFAMKDLGS 305
            G+ ++ S+H  F+K      F+ +L+YVDD++I  ++   ++ LK +L   F ++DLG 
Sbjct: 257 FGFVQSHSDHTYFLK-ITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGP 315

Query: 306 AKQILRMKMSRDRKQRKLWLSQEKYIEKILSRFNMSNAKPVXTPLASHFKLSLSQCPSSE 365
            K  L ++++R      + + Q KY   +L    +   KP   P+            S+ 
Sbjct: 316 LKYFLGLEIARSAA--GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTF------SAH 367

Query: 366 KEKEELKNIPYASAFGSLMYAMVCTKPDIAHAVGVVSRFLSNLGKEHXNAVKWILRYLKG 425
              + +    Y    G LMY  + T+ DI+ AV  +S+F       H  AV  IL Y+KG
Sbjct: 368 SGGDFVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKG 426

Query: 426 TSKICLYFGDNRPV-LDGYTDADMGGDVDSRKLTSGYLMTFARAAISWQSKLQKCVALSS 484
           T    L++     + L  ++DA      D+R+ T+GY M    + ISW+SK Q+ V+ SS
Sbjct: 427 TVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSS 486

Query: 485 IEAEYIAITKASKELLWMKKFLQELGVEQEK-YILLCDSQSAVHLSKNSTFHLRSKHIDV 543
            EAEY A++ A+ E++W+ +F +EL +   K  +L CD+ +A+H++ N+ FH R+KHI+ 
Sbjct: 487 AEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIES 546

Query: 544 RYHWIRD 550
             H +R+
Sbjct: 547 DCHSVRE 553


>ATMG00810.1 | Symbols: ORF240B | hypothetical protein |
           chrM:227709-228431 REVERSE
          Length = 240

 Score =  116 bits (291), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 122/233 (52%), Gaps = 11/233 (4%)

Query: 270 LLLYVDDMLIVGHDAKKIESLKKELGKSFAMKDLGSAKQILRMKMSRDRKQRKLWLSQEK 329
           LLLYVDD+L+ G     +  L  +L  +F+MKDLG     L +++        L+LSQ K
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQTK 60

Query: 330 YIEKILSRFNMSNAKPVXTPLASHFKLSLSQCPSSEKEKEELKNIPYASAFGSLMYAMVC 389
           Y E+IL+   M + KP+ TPL    KL+ S   +   +  + ++I      G+L Y +  
Sbjct: 61  YAEQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSI-----VGALQY-LTL 112

Query: 390 TKPDIAHAVGVVSRFLSNLGKEHXNAVKWILRYLKGTSKICLYFGDNRPV-LDGYTDADM 448
           T+PDI++AV +V + +        + +K +LRY+KGT    LY   N  + +  + D+D 
Sbjct: 113 TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDW 172

Query: 449 GGDVDSRKLTSGYLMTFARAAISWQSKLQKCVALSSIEAEYIAITKASKELLW 501
            G   +R+ T+G+        ISW +K Q  V+ SS E EY A+   + EL W
Sbjct: 173 AGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225


>ATMG00820.1 | Symbols: ORF170 | hypothetical protein |
           chrM:228573-229085 REVERSE
          Length = 170

 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 67/105 (63%), Gaps = 3/105 (2%)

Query: 85  EPENYQEAMEDCKRNEWWKAMQDEMESLHENRTYELVKLPQGKKALKNKWVFRLKTEQNN 144
           EP++   A++D     W +AMQ+E+++L  N+T+ LV  P  +  L  KWVF+ K   + 
Sbjct: 27  EPKSVIFALKD---PGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDG 83

Query: 145 SQPRYKARLVVKGFGQKKGVDFEEIFSPVVKMSSIRVVLGLAASL 189
           +  R KARLV KGF Q++G+ F E +SPVV+ ++IR +L +A  L
Sbjct: 84  TLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQL 128