Jatropha Genome Database

JcCB0611761.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0611761.10 - phase: 0 /partial
         (81 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G26640.1 | Symbols:  | aspartate/glutamate/uridylate kinase f...   122   4e-29

>AT1G26640.1 | Symbols:  | aspartate/glutamate/uridylate kinase
           family protein | chr1:9207620-9209766 REVERSE
          Length = 332

 Score =  122 bits (307), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 58/81 (71%), Positives = 67/81 (82%)

Query: 1   MITGSGSQKVIGFDWSKKPGDPEISCDVDNFEDQTLLDSSSFVVVHGAGSFGHFQASKSG 60
           M+ GS   KVIG DWSK+PG  EISCDVD+  DQ   + S FVVVHGAGSFGHFQAS+SG
Sbjct: 49  MLEGSAPSKVIGMDWSKRPGSSEISCDVDDIGDQKSSEFSKFVVVHGAGSFGHFQASRSG 108

Query: 61  VHKGGLDQPLVRAGFVATRIS 81
           VHKGGL++P+V+AGFVATRIS
Sbjct: 109 VHKGGLEKPIVKAGFVATRIS 129