Jatropha Genome Database
- JcCB0601851.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0601851.10 + phase: 1 /pseudo/partial
(85 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G08420.1 | Symbols: BSL2 | kelch repeat-containing protein / ... 174 8e-45
AT2G27210.1 | Symbols: BSL3 | kelch repeat-containing serine/thr... 173 2e-44
AT4G03080.1 | Symbols: BSL1 | kelch repeat-containing serine/thr... 120 3e-28
AT1G03445.1 | Symbols: BSU1 | BSU1 (BRI1 SUPPRESSOR 1); protein ... 92 5e-20
AT5G27630.1 | Symbols: ACBP5 | ACBP5 (ACYL-COA BINDING PROTEIN 5... 56 4e-09
AT3G05420.1 | Symbols: ACBP4 | ACBP4 (ACYL-COA BINDING PROTEIN 4... 52 1e-07
AT3G05420.2 | Symbols: ACBP4 | ACBP4 (ACYL-COA BINDING PROTEIN 4... 52 1e-07
AT1G18610.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 50 2e-07
AT1G74150.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 49 9e-07
AT3G07720.1 | Symbols: | kelch repeat-containing protein | chr3... 47 2e-06
>AT1G08420.1 | Symbols: BSL2 | kelch repeat-containing protein /
serine/threonine phosphoesterase family protein |
chr1:2649959-2656564 FORWARD
Length = 1018
Score = 174 bits (442), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 82/85 (96%), Positives = 85/85 (100%)
Query: 1 LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 60
LAGATADVHCYDVL+NKW+R+TPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH
Sbjct: 158 LAGATADVHCYDVLSNKWTRLTPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 217
Query: 61 VLDLTQQRPRWHRVVVQGPGPGPRY 85
VLDLTQQRPRWHRVVVQGPGPGPRY
Sbjct: 218 VLDLTQQRPRWHRVVVQGPGPGPRY 242
>AT2G27210.1 | Symbols: BSL3 | kelch repeat-containing
serine/threonine phosphoesterase family protein |
chr2:11630188-11636182 FORWARD
Length = 1006
Score = 173 bits (438), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 81/85 (95%), Positives = 85/85 (100%)
Query: 1 LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 60
LAGATADVHCYDVL+NKWSR+TP+GEPP+PRAAHVATAVGTMVVIQGGIGPAGLSAEDLH
Sbjct: 147 LAGATADVHCYDVLSNKWSRLTPYGEPPSPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 206
Query: 61 VLDLTQQRPRWHRVVVQGPGPGPRY 85
VLDLTQQRPRWHRVVVQGPGPGPRY
Sbjct: 207 VLDLTQQRPRWHRVVVQGPGPGPRY 231
>AT4G03080.1 | Symbols: BSL1 | kelch repeat-containing
serine/threonine phosphoesterase family protein |
chr4:1359935-1365166 REVERSE
Length = 881
Score = 120 bits (300), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 69/85 (81%)
Query: 1 LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 60
LAG T VH YD+LT KW+R+ P GEPP+PRAAH A AVGTMVV QGGIGPAG S +DL+
Sbjct: 69 LAGVTNTVHSYDILTRKWTRLKPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLY 128
Query: 61 VLDLTQQRPRWHRVVVQGPGPGPRY 85
VLD+T + +WHRVVVQG GPGPRY
Sbjct: 129 VLDMTNDKFKWHRVVVQGDGPGPRY 153
>AT1G03445.1 | Symbols: BSU1 | BSU1 (BRI1 SUPPRESSOR 1); protein
serine/threonine phosphatase | chr1:854653-859599
REVERSE
Length = 793
Score = 92.4 bits (228), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
Query: 1 LAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLH 60
L G T VH +DVLT KW+R+ P G+ P+PRA H A GT+++IQGGIGP+G S D++
Sbjct: 69 LDGVTNSVHSFDVLTRKWTRLNPIGDVPSPRACHAAALYGTLILIQGGIGPSGPSDGDVY 128
Query: 61 VLDLTQQRPRWHRVVVQGPGPGPRY 85
+LD+T +W + +V G P PRY
Sbjct: 129 MLDMTNN--KWIKFLVGGETPSPRY 151
>AT5G27630.1 | Symbols: ACBP5 | ACBP5 (ACYL-COA BINDING PROTEIN 5);
acyl-CoA binding | chr5:9776101-9780780 FORWARD
Length = 648
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 7 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQ 66
D+H D+ T W I G PPTPR+ H A ++ G G +DLHVLDL
Sbjct: 323 DLHILDLDTMTWEEIDAVGSPPTPRSDHAAAVHAERYLLIFGGGSHATCFDDLHVLDL-- 380
Query: 67 QRPRWHRVVVQGPGPGPR 84
Q W R QG P PR
Sbjct: 381 QTMEWSRHTQQGDAPTPR 398
>AT3G05420.1 | Symbols: ACBP4 | ACBP4 (ACYL-COA BINDING PROTEIN 4);
acyl-CoA binding | chr3:1561880-1567047 FORWARD
Length = 668
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 7 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQ 66
D+H D+ T W I G P+PR+ H A ++ G G +DLHVLDL
Sbjct: 322 DLHILDLDTMTWDEIDAVGVSPSPRSDHAAAVHAERFLLIFGGGSHATCFDDLHVLDL-- 379
Query: 67 QRPRWHRVVVQGPGPGPR 84
Q W R QG P PR
Sbjct: 380 QTMEWSRPAQQGDAPTPR 397
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 8 VHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQ 67
V +D T WS + +G+PP R T VG +VI GG DLH+LDL
Sbjct: 272 VKVFDPHTITWSMLKTYGKPPVSRGGQSVTMVGKTLVIFGGQDAKRSLLNDLHILDLDTM 331
Query: 68 RPRWHRVVVQGPGPGPR 84
W + G P PR
Sbjct: 332 --TWDEIDAVGVSPSPR 346
>AT3G05420.2 | Symbols: ACBP4 | ACBP4 (ACYL-COA BINDING PROTEIN 4);
acyl-CoA binding | chr3:1561880-1567047 FORWARD
Length = 669
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 7 DVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQ 66
D+H D+ T W I G P+PR+ H A ++ G G +DLHVLDL
Sbjct: 323 DLHILDLDTMTWDEIDAVGVSPSPRSDHAAAVHAERFLLIFGGGSHATCFDDLHVLDL-- 380
Query: 67 QRPRWHRVVVQGPGPGPR 84
Q W R QG P PR
Sbjct: 381 QTMEWSRPAQQGDAPTPR 398
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 8 VHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQ 67
V +D T WS + +G+PP R T VG +VI GG DLH+LDL
Sbjct: 273 VKVFDPHTITWSMLKTYGKPPVSRGGQSVTMVGKTLVIFGGQDAKRSLLNDLHILDLDTM 332
Query: 68 RPRWHRVVVQGPGPGPR 84
W + G P PR
Sbjct: 333 --TWDEIDAVGVSPSPR 347
>AT1G18610.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Galactose oxidase/kelch,
beta-propeller (InterPro:IPR011043), Kelch repeat type 1
(InterPro:IPR006652), Kelch repeat type 2
(InterPro:IPR011498), Kelch-type beta propeller
(InterPro:IPR015915); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G74150.1); Has 8761
Blast hits to 4412 proteins in 271 species: Archae - 12;
Bacteria - 304; Metazoa - 4209; Fungi - 851; Plants -
1246; Viruses - 11; Other Eukaryotes - 2128 (source:
NCBI BLink). | chr1:6405779-6408831 FORWARD
Length = 554
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 6 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLT 65
+DVH D T W + G+ TPRA HV ++G + GG A +DL+VLD+
Sbjct: 210 SDVHILDTDTLIWKELNTSGQLLTPRAGHVTVSLGRNFFVFGGFTDAQNLYDDLYVLDV- 268
Query: 66 QQRPRWHRVVVQGPGPGPRY 85
W +V+ G GP R+
Sbjct: 269 -DTCIWSKVLTMGEGPSARF 287
>AT1G74150.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 14 plant
structures; EXPRESSED DURING: 6 growth stages; CONTAINS
InterPro DOMAIN/s: Galactose oxidase/kelch,
beta-propeller (InterPro:IPR011043), Kelch repeat type 1
(InterPro:IPR006652), Kelch repeat type 2
(InterPro:IPR011498), Kelch-type beta propeller
(InterPro:IPR015915); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G18610.1); Has 8525
Blast hits to 4249 proteins in 295 species: Archae - 10;
Bacteria - 313; Metazoa - 3989; Fungi - 859; Plants -
1220; Viruses - 19; Other Eukaryotes - 2115 (source:
NCBI BLink). | chr1:27880528-27883496 FORWARD
Length = 553
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 6 ADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLT 65
+DVH D W + G+ TPRA HV A+ + + GG + +DL+VLDL
Sbjct: 207 SDVHILDTDKFVWKELKTSGQVLTPRAGHVTVALERNLFVFGGFTDSQNLYDDLYVLDL- 265
Query: 66 QQRPRWHRVVVQGPGPGPRY 85
+ W +VV GP R+
Sbjct: 266 -ETGVWSKVVAMVEGPSARF 284
>AT3G07720.1 | Symbols: | kelch repeat-containing protein |
chr3:2465439-2467033 FORWARD
Length = 329
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 1 LAGATAD-VHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGG-IGP------- 51
AG AD VHC+D+ +W + GE P+ R+ VG ++I GG I P
Sbjct: 194 FAGEEADDVHCFDIAKGEWKEVETKGEKPSARSVFSTAVVGKQILISGGEIDPSDLGHMG 253
Query: 52 AGLSAEDLHVLDL-TQQRPRWHRVVVQGPGPGPR 84
AG D + LD T + +W V PGPR
Sbjct: 254 AGCFTGDAYGLDTETLEWRKWEDGVGSVEHPGPR 287