Jatropha Genome Database

JcCB0600521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0600521.10 - phase: 0 /pseudo/partial
         (236 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G47450.1 | Symbols: ATNOS1, NOS1, ATNOA1, NOA1, RIF1 | NOA1 (...   286   6e-78
AT3G47450.2 | Symbols: ATNOS1, NOS1, ATNOA1, NOA1, RIF1 | NOA1 (...   286   6e-78

>AT3G47450.1 | Symbols: ATNOS1, NOS1, ATNOA1, NOA1, RIF1 | NOA1 (NO
           ASSOCIATED 1); GTPase/ nitric-oxide synthase |
           chr3:17483195-17486249 REVERSE
          Length = 561

 Score =  286 bits (733), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 151/180 (83%), Positives = 166/180 (92%), Gaps = 1/180 (0%)

Query: 37  VNMTVACCYGCGAPLQTLDQEAPGYVLPETYELKKRHRQLRTVLCGRCKLLSHGHMITAV 96
           V+ +V+CCYGCGAPLQT D ++PG+V   TYELKK+H QLRT++CGRC+LLSHGHMITAV
Sbjct: 101 VDTSVSCCYGCGAPLQTSDVDSPGFVDLVTYELKKKHHQLRTMICGRCQLLSHGHMITAV 160

Query: 97  GGNGGYPGGKQFVSADELREKLSHLRHEKALIVKLVDIVDFNGSFLARVRDLAGANPIIL 156
           GGNGGYPGGKQFVSADELREKLSHLRHEKALIVKLVDIVDFNGSFLARVRDL GANPIIL
Sbjct: 161 GGNGGYPGGKQFVSADELREKLSHLRHEKALIVKLVDIVDFNGSFLARVRDLVGANPIIL 220

Query: 157 VITKVIDLLPKETDLNCVGDWVVEATTKKKLNVLSVHLTSSKSLVGIAGVISEIQKEKKG 216
           VITK IDLLPK TD+NC+GDWVVE T +KKLNVLSVHLTSSKSL G++GV SEIQKEKKG
Sbjct: 221 VITK-IDLLPKGTDMNCIGDWVVEVTMRKKLNVLSVHLTSSKSLDGVSGVASEIQKEKKG 279


>AT3G47450.2 | Symbols: ATNOS1, NOS1, ATNOA1, NOA1, RIF1 | NOA1 (NO
           ASSOCIATED 1); GTPase/ nitric-oxide synthase |
           chr3:17483195-17486249 REVERSE
          Length = 561

 Score =  286 bits (733), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 151/180 (83%), Positives = 166/180 (92%), Gaps = 1/180 (0%)

Query: 37  VNMTVACCYGCGAPLQTLDQEAPGYVLPETYELKKRHRQLRTVLCGRCKLLSHGHMITAV 96
           V+ +V+CCYGCGAPLQT D ++PG+V   TYELKK+H QLRT++CGRC+LLSHGHMITAV
Sbjct: 101 VDTSVSCCYGCGAPLQTSDVDSPGFVDLVTYELKKKHHQLRTMICGRCQLLSHGHMITAV 160

Query: 97  GGNGGYPGGKQFVSADELREKLSHLRHEKALIVKLVDIVDFNGSFLARVRDLAGANPIIL 156
           GGNGGYPGGKQFVSADELREKLSHLRHEKALIVKLVDIVDFNGSFLARVRDL GANPIIL
Sbjct: 161 GGNGGYPGGKQFVSADELREKLSHLRHEKALIVKLVDIVDFNGSFLARVRDLVGANPIIL 220

Query: 157 VITKVIDLLPKETDLNCVGDWVVEATTKKKLNVLSVHLTSSKSLVGIAGVISEIQKEKKG 216
           VITK IDLLPK TD+NC+GDWVVE T +KKLNVLSVHLTSSKSL G++GV SEIQKEKKG
Sbjct: 221 VITK-IDLLPKGTDMNCIGDWVVEVTMRKKLNVLSVHLTSSKSLDGVSGVASEIQKEKKG 279