Jatropha Genome Database

JcCB0590701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0590701.10 - phase: 0 /pseudo
         (104 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G16143.2 | Symbols: IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2...   105   7e-24
AT4G16143.1 | Symbols: IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM 2...   105   7e-24
AT1G02690.2 | Symbols: IMPA-6 | IMPA-6 (IMPORTIN ALPHA ISOFORM 6...   103   2e-23
AT1G02690.1 | Symbols: IMPA-6 | IMPA-6 (IMPORTIN ALPHA ISOFORM 6...   103   2e-23
AT3G06720.2 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA | IMPA-1 ...   102   7e-23
AT3G06720.1 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA, IMPA-1, ...   102   7e-23
AT4G02150.1 | Symbols: MOS6, ATIMPALPHA3, IMPA-3 | MOS6 (MODIFIE...   100   3e-22
AT1G09270.2 | Symbols: IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4...    89   5e-19
AT1G09270.1 | Symbols: IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM 4...    89   5e-19
AT5G49310.1 | Symbols: IMPA-5 | IMPA-5 (IMPORTIN ALPHA ISOFORM 5...    84   2e-17
AT3G05720.1 | Symbols: IMPA-7 | IMPA-7 (IMPORTIN ALPHA ISOFORM 7...    66   5e-12

>AT4G16143.2 | Symbols: IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM
          2); binding / protein transporter |
          chr4:9134450-9137134 REVERSE
          Length = 535

 Score =  105 bits (261), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 47/53 (88%), Positives = 53/53 (100%)

Query: 1  MSLRPSARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          MSLRP+A+TEVRRN+YKVAVDA+EGRRRREDNMVEIRK+KREE+LQKKRREGL
Sbjct: 1  MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLQKKRREGL 53


>AT4G16143.1 | Symbols: IMPA-2 | IMPA-2 (IMPORTIN ALPHA ISOFORM
          2); binding / protein transporter |
          chr4:9134450-9137134 REVERSE
          Length = 535

 Score =  105 bits (261), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 47/53 (88%), Positives = 53/53 (100%)

Query: 1  MSLRPSARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          MSLRP+A+TEVRRN+YKVAVDA+EGRRRREDNMVEIRK+KREE+LQKKRREGL
Sbjct: 1  MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLQKKRREGL 53


>AT1G02690.2 | Symbols: IMPA-6 | IMPA-6 (IMPORTIN ALPHA ISOFORM
          6); binding / protein transporter | chr1:584397-587036
          FORWARD
          Length = 539

 Score =  103 bits (258), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/53 (88%), Positives = 51/53 (96%)

Query: 1  MSLRPSARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          MS +PSA+TEVRRN+YKV+VDADEGRRRREDNMVEIRKNKREENLQKKRREG 
Sbjct: 1  MSYKPSAKTEVRRNRYKVSVDADEGRRRREDNMVEIRKNKREENLQKKRREGF 53


>AT1G02690.1 | Symbols: IMPA-6 | IMPA-6 (IMPORTIN ALPHA ISOFORM
          6); binding / protein transporter | chr1:584397-587036
          FORWARD
          Length = 538

 Score =  103 bits (258), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/53 (88%), Positives = 51/53 (96%)

Query: 1  MSLRPSARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          MS +PSA+TEVRRN+YKV+VDADEGRRRREDNMVEIRKNKREENLQKKRREG 
Sbjct: 1  MSYKPSAKTEVRRNRYKVSVDADEGRRRREDNMVEIRKNKREENLQKKRREGF 53


>AT3G06720.2 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA | IMPA-1
          (IMPORTIN ALPHA ISOFORM 1); binding / protein
          transporter | chr3:2120559-2123555 FORWARD
          Length = 532

 Score =  102 bits (253), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 45/53 (84%), Positives = 52/53 (98%)

Query: 1  MSLRPSARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          MSLRP+A+TEVRRN+YKVAVDA+EGRRRREDNMVEIRK+KREE+L KKRREG+
Sbjct: 1  MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLMKKRREGM 53


>AT3G06720.1 | Symbols: AT-IMP, ATKAP ALPHA, AIMP ALPHA, IMPA-1,
          IMPA1 | IMPA-1 (IMPORTIN ALPHA ISOFORM 1); binding /
          protein transporter | chr3:2120559-2123555 FORWARD
          Length = 532

 Score =  102 bits (253), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 45/53 (84%), Positives = 52/53 (98%)

Query: 1  MSLRPSARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          MSLRP+A+TEVRRN+YKVAVDA+EGRRRREDNMVEIRK+KREE+L KKRREG+
Sbjct: 1  MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLMKKRREGM 53


>AT4G02150.1 | Symbols: MOS6, ATIMPALPHA3, IMPA-3 | MOS6 (MODIFIER
          OF SNC1, 6); binding / protein transporter |
          chr4:950884-953602 REVERSE
          Length = 531

 Score = 99.8 bits (247), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/49 (91%), Positives = 49/49 (100%)

Query: 1  MSLRPSARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKR 49
          MSLRPSA+TEVRRN+YKVAVDA+EGRRRREDN+VEIRKNKREENLQKKR
Sbjct: 1  MSLRPSAKTEVRRNRYKVAVDAEEGRRRREDNLVEIRKNKREENLQKKR 49


>AT1G09270.2 | Symbols: IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM
          4); binding / protein transporter |
          chr1:2994506-2997833 FORWARD
          Length = 538

 Score = 89.0 bits (219), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/53 (73%), Positives = 45/53 (84%)

Query: 1  MSLRPSARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          MSLRPS R E+R+  YK  VDADE RRRREDN+VEIRKNKRE++L KKRREG+
Sbjct: 1  MSLRPSTRAELRKKIYKTGVDADEARRRREDNLVEIRKNKREDSLLKKRREGM 53


>AT1G09270.1 | Symbols: IMPA-4 | IMPA-4 (IMPORTIN ALPHA ISOFORM
          4); binding / protein transporter |
          chr1:2994506-2997833 FORWARD
          Length = 538

 Score = 89.0 bits (219), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/53 (73%), Positives = 45/53 (84%)

Query: 1  MSLRPSARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          MSLRPS R E+R+  YK  VDADE RRRREDN+VEIRKNKRE++L KKRREG+
Sbjct: 1  MSLRPSTRAELRKKIYKTGVDADEARRRREDNLVEIRKNKREDSLLKKRREGM 53


>AT5G49310.1 | Symbols: IMPA-5 | IMPA-5 (IMPORTIN ALPHA ISOFORM
          5); binding / protein transporter |
          chr5:19992016-19994516 REVERSE
          Length = 519

 Score = 84.3 bits (207), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/50 (76%), Positives = 45/50 (90%)

Query: 1  MSLRPSARTEVRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRR 50
          MSLRPS +TE+RR +YKV+VDA+EGRRRRED +VEIRK+KR ENL KKRR
Sbjct: 1  MSLRPSTKTEIRRIRYKVSVDAEEGRRRREDFLVEIRKSKRNENLMKKRR 50


>AT3G05720.1 | Symbols: IMPA-7 | IMPA-7 (IMPORTIN ALPHA ISOFORM
          7); binding / protein transporter |
          chr3:1687992-1691736 REVERSE
          Length = 528

 Score = 65.9 bits (159), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/43 (72%), Positives = 34/43 (79%)

Query: 11 VRRNKYKVAVDADEGRRRREDNMVEIRKNKREENLQKKRREGL 53
          VRR+ YK  VD   GRRRRED+MVEIRK KREE+L KKRRE L
Sbjct: 9  VRRSGYKAVVDGVGGRRRREDDMVEIRKAKREESLLKKRREAL 51