Jatropha Genome Database

JcCB0582451.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0582451.10 + phase: 1 /partial
         (229 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G40280.1 | Symbols: ERA1, ATFTB, WIG | ERA1 (ENHANCED RESPONS...   239   1e-63
AT2G39550.1 | Symbols: ATGGT-IB, GGB, PGGT-I | PGGT-I; CAAX-prot...    66   2e-11
AT5G12210.1 | Symbols:  | geranylgeranyl transferase type II bet...    61   6e-10
AT5G12210.2 | Symbols:  | geranylgeranyl transferase type II bet...    61   6e-10
AT3G12070.2 | Symbols:  | geranylgeranyl transferase type II bet...    57   1e-08
AT3G12070.1 | Symbols:  | geranylgeranyl transferase type II bet...    57   1e-08

>AT5G40280.1 | Symbols: ERA1, ATFTB, WIG | ERA1 (ENHANCED RESPONSE
           TO ABA 1); farnesyltranstransferase/ protein
           farnesyltransferase | chr5:16101391-16104783 FORWARD
          Length = 482

 Score =  239 bits (609), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 122/242 (50%), Positives = 152/242 (62%), Gaps = 24/242 (9%)

Query: 5   TEGGSIAGEPGSEAHVGYTFCGLAAMVLINEVNRLDMARLIDWVVFRQGVECGFQGRTNK 64
           T  G I GEPGSEAH GYT+CGLAAM+LINEV+RL++  L++W V RQGVE GFQGRTNK
Sbjct: 242 TYEGGIGGEPGSEAHGGYTYCGLAAMILINEVDRLNLDSLMNWAVHRQGVEMGFQGRTNK 301

Query: 65  LVDGCYSFWQGGVFAILQRLRSVSGEGVAFSDAEAGDYATDSTSEGEVTNGNSS------ 118
           LVDGCY+FWQ     +LQRL S +       D     + ++ T+E    +          
Sbjct: 302 LVDGCYTFWQAAPCVLLQRLYSTNDH-----DVHGSSHISEGTNEEHHAHDEDDLEDSDD 356

Query: 119 -------------EADEPDHFKQGDHGEMVPPFHSMALQQYILLCSQEQDGGFRDKPGKA 165
                              H     +  M   F S+ LQ+Y+LLCS+  DGGFRDKP K 
Sbjct: 357 DDDSDEDNDEDSVNGHRIHHTSTYINRRMQLVFDSLGLQRYVLLCSKIPDGGFRDKPRKP 416

Query: 166 RDFYHTCYCLSGLSVCQYSWSKDEHSPPPTRAVLGPYSNLLEPVHPLYNVVLKQYHEARD 225
           RDFYHTCYCLSGLSV Q++W KDE +PP TR ++G YSNLLEPV  L+N+V+ QY+EA +
Sbjct: 417 RDFYHTCYCLSGLSVAQHAWLKDEDTPPLTRDIMGGYSNLLEPVQLLHNIVMDQYNEAIE 476

Query: 226 FF 227
           FF
Sbjct: 477 FF 478


>AT2G39550.1 | Symbols: ATGGT-IB, GGB, PGGT-I | PGGT-I; CAAX-protein
           geranylgeranyltransferase/ protein heterodimerization |
           chr2:16501666-16504144 FORWARD
          Length = 375

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 63/180 (35%)

Query: 14  PGSEAHVGYTFCGLAAMVLINEVN-----------RLDMARLIDWVVFRQGVECGFQGRT 62
           PGSE+H G T+C +A++ L+  +             +D + L++W + RQ  + GFQGRT
Sbjct: 227 PGSESHGGATYCAIASLRLMGYIGVDLLSNDSSSSIIDPSLLLNWCLQRQANDGGFQGRT 286

Query: 63  NKLVDGCYSFWQGGVFAILQRLRSVSGEGVAFSDAEAGDYATDSTSEGEVTNGNSSEADE 122
           NK  D CY+FW G V  ++                  GD   D                 
Sbjct: 287 NKPSDTCYAFWIGAVLKLI-----------------GGDALID----------------- 312

Query: 123 PDHFKQGDHGEMVPPFHSMALQQYILLCSQEQDGGFRDKPGKARDFYHTCYCLSGLSVCQ 182
                             MAL+++++ C Q + GGF   PG+  D YH+ Y  +  S+ +
Sbjct: 313 -----------------KMALRKFLMSC-QSKYGGFSKFPGQLPDLYHSYYGYTAFSLLE 354


>AT5G12210.1 | Symbols:  | geranylgeranyl transferase type II beta
           subunit, putative / RAB geranylgeranyltransferase beta
           subunit, putative | chr5:3947254-3949595 FORWARD
          Length = 321

 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 68/176 (38%), Gaps = 51/176 (28%)

Query: 8   GSIAGEPGSEAHVGYTFCGLAAMVLINEVNRLDMARLIDWVVFRQGVECGFQGRTNKLVD 67
           G     PG+E+H G  FC + A+ +   ++ +D   L  W+  RQ    G  GR  KL D
Sbjct: 173 GGFGCTPGAESHAGQIFCCVGALAITGSLHHVDKDSLGWWLCERQLKAGGLNGRPEKLAD 232

Query: 68  GCYSFWQGGVFAILQRLRSVSGEGVAFSDAEAGDYATDSTSEGEVTNGNSSEADEPDHFK 127
            CYS+W      ++ R+  +                                        
Sbjct: 233 VCYSWWVLSSLIMIDRVHWI---------------------------------------- 252

Query: 128 QGDHGEMVPPFHSMALQQYILLCSQEQDGGFRDKPGKARDFYHTCYCLSGLSVCQY 183
             D  ++V         ++IL C    +GG  D+P  A D +HT + ++GLS+ +Y
Sbjct: 253 --DKAKLV---------KFILDCQDLDNGGISDRPEDAVDIFHTYFGVAGLSLLEY 297


>AT5G12210.2 | Symbols:  | geranylgeranyl transferase type II beta
           subunit, putative / RAB geranylgeranyltransferase beta
           subunit, putative | chr5:3947254-3949595 FORWARD
          Length = 320

 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 68/176 (38%), Gaps = 51/176 (28%)

Query: 8   GSIAGEPGSEAHVGYTFCGLAAMVLINEVNRLDMARLIDWVVFRQGVECGFQGRTNKLVD 67
           G     PG+E+H G  FC + A+ +   ++ +D   L  W+  RQ    G  GR  KL D
Sbjct: 172 GGFGCTPGAESHAGQIFCCVGALAITGSLHHVDKDSLGWWLCERQLKAGGLNGRPEKLAD 231

Query: 68  GCYSFWQGGVFAILQRLRSVSGEGVAFSDAEAGDYATDSTSEGEVTNGNSSEADEPDHFK 127
            CYS+W      ++ R+  +                                        
Sbjct: 232 VCYSWWVLSSLIMIDRVHWI---------------------------------------- 251

Query: 128 QGDHGEMVPPFHSMALQQYILLCSQEQDGGFRDKPGKARDFYHTCYCLSGLSVCQY 183
             D  ++V         ++IL C    +GG  D+P  A D +HT + ++GLS+ +Y
Sbjct: 252 --DKAKLV---------KFILDCQDLDNGGISDRPEDAVDIFHTYFGVAGLSLLEY 296


>AT3G12070.2 | Symbols:  | geranylgeranyl transferase type II beta
           subunit, putative / RAB geranylgeranyltransferase beta
           subunit, putative | chr3:3845420-3847140 REVERSE
          Length = 317

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/213 (21%), Positives = 77/213 (36%), Gaps = 64/213 (30%)

Query: 8   GSIAGEPGSEAHVGYTFCGLAAMVLINEVNRLDMARLIDWVVFRQGVEC-GFQGRTNKLV 66
           G     PG+E+H G  FC + A+ +   ++R+D   L  W+  RQ  E  G  GR  KL 
Sbjct: 168 GGFGCSPGAESHAGQIFCCVGALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKLP 227

Query: 67  DGCYSFWQGGVFAILQRLRSVSGEGVAFSDAEAGDYATDSTSEGEVTNGNSSEADEPDHF 126
           D CYS+W      ++ R+  +                                       
Sbjct: 228 DVCYSWWVLSSLIMIDRVHWI--------------------------------------- 248

Query: 127 KQGDHGEMVPPFHSMALQQYILLCSQEQDGGFRDKPGKARDFYHTCYCLSGLSVCQYSWS 186
                           L ++IL      +GG  D+P    D +HT + ++GLS+ +Y   
Sbjct: 249 ------------EKAKLVKFILDSQDMDNGGISDRPSYTVDIFHTYFGVAGLSLLEY--- 293

Query: 187 KDEHSPPPTRAVLGPYSNLLEPVHPLYNVVLKQ 219
                 P  + +   Y+    PVH +  ++  +
Sbjct: 294 ------PGVKTIDPAYA---LPVHVINRILFTK 317


>AT3G12070.1 | Symbols:  | geranylgeranyl transferase type II beta
           subunit, putative / RAB geranylgeranyltransferase beta
           subunit, putative | chr3:3845420-3847140 REVERSE
          Length = 317

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/213 (21%), Positives = 77/213 (36%), Gaps = 64/213 (30%)

Query: 8   GSIAGEPGSEAHVGYTFCGLAAMVLINEVNRLDMARLIDWVVFRQGVEC-GFQGRTNKLV 66
           G     PG+E+H G  FC + A+ +   ++R+D   L  W+  RQ  E  G  GR  KL 
Sbjct: 168 GGFGCSPGAESHAGQIFCCVGALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKLP 227

Query: 67  DGCYSFWQGGVFAILQRLRSVSGEGVAFSDAEAGDYATDSTSEGEVTNGNSSEADEPDHF 126
           D CYS+W      ++ R+  +                                       
Sbjct: 228 DVCYSWWVLSSLIMIDRVHWI--------------------------------------- 248

Query: 127 KQGDHGEMVPPFHSMALQQYILLCSQEQDGGFRDKPGKARDFYHTCYCLSGLSVCQYSWS 186
                           L ++IL      +GG  D+P    D +HT + ++GLS+ +Y   
Sbjct: 249 ------------EKAKLVKFILDSQDMDNGGISDRPSYTVDIFHTYFGVAGLSLLEY--- 293

Query: 187 KDEHSPPPTRAVLGPYSNLLEPVHPLYNVVLKQ 219
                 P  + +   Y+    PVH +  ++  +
Sbjct: 294 ------PGVKTIDPAYA---LPVHVINRILFTK 317