Jatropha Genome Database
- JcCB0582281.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0582281.10 - phase: 0
(84 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11 | ARAC10; GTP bi... 86 4e-18
AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | ROP10 (RH... 81 1e-16
AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 | R... 74 3e-14
AT5G45970.1 | Symbols: ARAC2, ROP7, ATRAC2, ATROP7 | ARAC2 (ARAB... 72 6e-14
AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | ROP2 (RHO-R... 69 4e-13
AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC... 69 6e-13
AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC... 69 6e-13
AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6 | ARAC3 (ARAB... 68 1e-12
AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | ARAC5 (RAC-L... 67 2e-12
AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5 | ARAC6... 66 5e-12
AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9 ... 66 5e-12
AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | ARAC9; GTP binding ... 51 2e-07
>AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11 | ARAC10; GTP
binding | chr5:25237236-25238939 FORWARD
Length = 215
Score = 85.9 bits (211), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 44/57 (77%)
Query: 18 LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCKICKQSIEYEVI 74
LREDKHYLADHPGL VTTAQGEELRK IGA YYIECSSKTQQ K S EVI
Sbjct: 124 LREDKHYLADHPGLSPVTTAQGEELRKLIGATYYIECSSKTQQNVKAVFDSAIKEVI 180
>AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | ROP10
(RHO-RELATED PROTEIN FROM PLANTS 10); GTP binding /
GTPase | chr3:17731561-17733241 FORWARD
Length = 208
Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 40/46 (86%)
Query: 18 LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
LRED+HYL+DHPGL VTT+QGEELRK IGA YYIECSSKTQQ K
Sbjct: 124 LREDRHYLSDHPGLSPVTTSQGEELRKHIGATYYIECSSKTQQNVK 169
>AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 | ROP1
(RHO-RELATED PROTEIN FROM PLANTS 1); GTP binding /
GTPase activating protein binding / GTPase/ protein
binding | chr3:19043197-19044215 FORWARD
Length = 197
Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 37/46 (80%)
Query: 18 LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
LR+DK + DHPG V +TTAQGEELRKQIGA YIECSSKTQ+ K
Sbjct: 122 LRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVK 167
>AT5G45970.1 | Symbols: ARAC2, ROP7, ATRAC2, ATROP7 | ARAC2
(ARABIDOPSIS RAC-LIKE 2); GTP binding |
chr5:18643761-18645758 FORWARD
Length = 201
Score = 72.0 bits (175), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 18 LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
LR+DK +L DHPG ++TTAQGEELRK IGA Y+ECSSKTQQ K
Sbjct: 122 LRDDKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVK 167
>AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | ROP2
(RHO-RELATED PROTEIN FROM PLANTS 2); GTP binding |
chr1:6967223-6968603 FORWARD
Length = 195
Score = 69.3 bits (168), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 36/46 (78%)
Query: 18 LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
LR+DK + DHPG V +TT QGEEL+K IG+A YIECSSKTQQ K
Sbjct: 121 LRDDKQFFIDHPGAVPITTNQGEELKKLIGSAVYIECSSKTQQNVK 166
>AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC1;
GTP binding | chr2:7740313-7741942 FORWARD
Length = 197
Score = 68.9 bits (167), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 36/46 (78%)
Query: 18 LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
LR+DK + DHPG V +TTAQGEEL+K IGA YIECSSKTQ+ K
Sbjct: 122 LRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVK 167
>AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC1;
GTP binding | chr2:7740313-7741942 FORWARD
Length = 197
Score = 68.9 bits (167), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 36/46 (78%)
Query: 18 LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
LR+DK + DHPG V +TTAQGEEL+K IGA YIECSSKTQ+ K
Sbjct: 122 LRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVK 167
>AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6 | ARAC3
(ARABIDOPSIS RAC-LIKE 3); GTP binding / GTPase |
chr4:16673176-16674540 FORWARD
Length = 198
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 37/46 (80%)
Query: 18 LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
LR+DK + A+HPG V ++TAQGEEL+K IGA YIECS+KTQQ K
Sbjct: 122 LRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVK 167
>AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | ARAC5 (RAC-LIKE
GTP BINDING PROTEIN 5); GTP binding / GTPase |
chr1:28475964-28477377 FORWARD
Length = 196
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 35/46 (76%)
Query: 18 LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
LR+DK + DHPG V +TT QGEEL+K IG+ YIECSSKTQQ K
Sbjct: 122 LRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVK 167
>AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5 | ARAC6
(ARABIDOPSIS RAC-LIKE 6); GTP binding |
chr4:17024051-17025514 REVERSE
Length = 197
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 35/46 (76%)
Query: 18 LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
LR+DK + DHPG V +TT QGEEL+K IGA YIECSSK+Q+ K
Sbjct: 122 LRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVK 167
>AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9
(RHO-RELATED PROTEIN FROM PLANTS 9); GTP binding |
chr4:14278289-14279705 FORWARD
Length = 209
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 37/46 (80%), Gaps = 2/46 (4%)
Query: 18 LREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
LR+DK YLADH ++ T+ QGEELRKQIGAA YIECSSKTQQ K
Sbjct: 122 LRDDKGYLADHTNVI--TSTQGEELRKQIGAAAYIECSSKTQQNVK 165
>AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | ARAC9; GTP binding |
chr2:18429276-18430636 FORWARD
Length = 209
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 16 SHLREDKHYLADHPGLVAVTTAQGEELRKQIGAAYYIECSSKTQQVCK 63
S LR++ + ++PG + QG+ELRK+IGA YIECSSK Q K
Sbjct: 132 SDLRDNMQFPKNYPGACTIFPEQGQELRKEIGALAYIECSSKAQMNVK 179