Jatropha Genome Database

JcCB0580021.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0580021.20 - phase: 1 /partial
         (67 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G58610.2 | Symbols:  | ketol-acid reductoisomerase | chr3:216...   131   7e-32
AT3G58610.1 | Symbols:  | ketol-acid reductoisomerase | chr3:216...   131   7e-32

>AT3G58610.2 | Symbols:  | ketol-acid reductoisomerase |
           chr3:21671561-21674639 FORWARD
          Length = 591

 Score =  131 bits (330), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 60/67 (89%), Positives = 63/67 (94%)

Query: 1   RFDYILTQQAFVAVDNGAPVNRDLISNFLSDPVHGAIEVCAQLRPTLDISVPPDADFVRP 60
           RFDYILTQQA VAVD+GA +NRDLISNF SDPVHGAIEVCAQLRPT+DISVP DADFVRP
Sbjct: 525 RFDYILTQQALVAVDSGAAINRDLISNFFSDPVHGAIEVCAQLRPTVDISVPADADFVRP 584

Query: 61  ELRQSSN 67
           ELRQSSN
Sbjct: 585 ELRQSSN 591


>AT3G58610.1 | Symbols:  | ketol-acid reductoisomerase |
           chr3:21671561-21674639 FORWARD
          Length = 591

 Score =  131 bits (330), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 60/67 (89%), Positives = 63/67 (94%)

Query: 1   RFDYILTQQAFVAVDNGAPVNRDLISNFLSDPVHGAIEVCAQLRPTLDISVPPDADFVRP 60
           RFDYILTQQA VAVD+GA +NRDLISNF SDPVHGAIEVCAQLRPT+DISVP DADFVRP
Sbjct: 525 RFDYILTQQALVAVDSGAAINRDLISNFFSDPVHGAIEVCAQLRPTVDISVPADADFVRP 584

Query: 61  ELRQSSN 67
           ELRQSSN
Sbjct: 585 ELRQSSN 591