Jatropha Genome Database

JcCB0578941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0578941.10 - phase: 1 /pseudo/partial
         (187 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G17860.2 | Symbols: TIFY6B | JAZ3 (JASMONATE-ZIM-DOMAIN PROTE...    65   2e-11
AT3G17860.3 | Symbols: TIFY6B | JAZ3 (JASMONATE-ZIM-DOMAIN PROTE...    65   2e-11
AT3G17860.1 | Symbols: JAZ3, JAI3, TIFY6B | JAZ3 (JASMONATE-ZIM-...    65   2e-11
AT1G48500.1 | Symbols: JAZ4, TIFY6A | JAZ4 (JASMONATE-ZIM-DOMAIN...    63   1e-10
AT1G48500.3 | Symbols: JAZ4, TIFY6A | JAZ4 (JASMONATE-ZIM-DOMAIN...    63   1e-10
AT1G48500.2 | Symbols: JAZ4, TIFY6A | JAZ4 (JASMONATE-ZIM-DOMAIN...    63   1e-10

>AT3G17860.2 | Symbols: TIFY6B | JAZ3 (JASMONATE-ZIM-DOMAIN PROTEIN
           3) | chr3:6121083-6122691 FORWARD
          Length = 339

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 68/160 (42%), Gaps = 37/160 (23%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQA--------------PSS 87
           F AG+V VYDDISPEKA+AI+ LAGNGSS+    + P+   Q               PS 
Sbjct: 169 FYAGSVCVYDDISPEKAKAIMLLAGNGSSMPQVFSPPQTHQQVVHHTRASVDSSAMPPSF 228

Query: 88  KPIATDISPVSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAKSTGTTTPVSK 147
            P  + +SP                                     LT+         S 
Sbjct: 229 MPTISYLSP--------------------EAGSSTNGLGATKATRGLTSTYHNNQANGSN 268

Query: 148 LESPRIASTMGSVAATTMIPSAVPQARKASLARFLEKRKE 187
           +  P   S   +V A T+   A+P ARKASLARFLEKRKE
Sbjct: 269 INCPVPVSCSTNVMAPTV---ALPLARKASLARFLEKRKE 305


>AT3G17860.3 | Symbols: TIFY6B | JAZ3 (JASMONATE-ZIM-DOMAIN PROTEIN
           3) | chr3:6121143-6122691 FORWARD
          Length = 319

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 68/160 (42%), Gaps = 37/160 (23%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQA--------------PSS 87
           F AG+V VYDDISPEKA+AI+ LAGNGSS+    + P+   Q               PS 
Sbjct: 149 FYAGSVCVYDDISPEKAKAIMLLAGNGSSMPQVFSPPQTHQQVVHHTRASVDSSAMPPSF 208

Query: 88  KPIATDISPVSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAKSTGTTTPVSK 147
            P  + +SP                                     LT+         S 
Sbjct: 209 MPTISYLSP--------------------EAGSSTNGLGATKATRGLTSTYHNNQANGSN 248

Query: 148 LESPRIASTMGSVAATTMIPSAVPQARKASLARFLEKRKE 187
           +  P   S   +V A T+   A+P ARKASLARFLEKRKE
Sbjct: 249 INCPVPVSCSTNVMAPTV---ALPLARKASLARFLEKRKE 285


>AT3G17860.1 | Symbols: JAZ3, JAI3, TIFY6B | JAZ3
           (JASMONATE-ZIM-DOMAIN PROTEIN 3) | chr3:6119968-6122691
           FORWARD
          Length = 352

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 69/160 (43%), Gaps = 37/160 (23%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQA--------------PSS 87
           F AG+V VYDDISPEKA+AI+ LAGNGSS+    + P+   Q               PS 
Sbjct: 182 FYAGSVCVYDDISPEKAKAIMLLAGNGSSMPQVFSPPQTHQQVVHHTRASVDSSAMPPSF 241

Query: 88  KPIATDISPVSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAKSTGTTTPVSK 147
            P  + +SP +                                   LT+         S 
Sbjct: 242 MPTISYLSPEAGSSTNGLGATKATRG--------------------LTSTYHNNQANGSN 281

Query: 148 LESPRIASTMGSVAATTMIPSAVPQARKASLARFLEKRKE 187
           +  P   S   +V A T+   A+P ARKASLARFLEKRKE
Sbjct: 282 INCPVPVSCSTNVMAPTV---ALPLARKASLARFLEKRKE 318


>AT1G48500.1 | Symbols: JAZ4, TIFY6A | JAZ4 (JASMONATE-ZIM-DOMAIN
           PROTEIN 4) | chr1:17931658-17934433 FORWARD
          Length = 310

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 64/148 (43%), Gaps = 25/148 (16%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQAPSSKPIATDISPVSQXX 101
           F AG+V VY DI+PEKAQAI+ LAGNG                P +K       PVSQ  
Sbjct: 151 FYAGSVLVYQDIAPEKAQAIMLLAGNG----------------PHAK-------PVSQPK 187

Query: 102 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAKSTGTTTPVSKLESPRIASTMGS-V 160
                                         E  ++ S G T          +AST  +  
Sbjct: 188 PQKLVHHSLPTTDPPTMPPSFLPSISYIVSETRSSGSNGVTGLGPTKTKASLASTRNNQT 247

Query: 161 AATTMIPS-AVPQARKASLARFLEKRKE 187
           AA +M P+  +PQ RKASLARFLEKRKE
Sbjct: 248 AAFSMAPTVGLPQTRKASLARFLEKRKE 275


>AT1G48500.3 | Symbols: JAZ4, TIFY6A | JAZ4 (JASMONATE-ZIM-DOMAIN
           PROTEIN 4) | chr1:17932994-17934255 FORWARD
          Length = 247

 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 64/148 (43%), Gaps = 25/148 (16%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQAPSSKPIATDISPVSQXX 101
           F AG+V VY DI+PEKAQAI+ LAGNG                P +K       PVSQ  
Sbjct: 121 FYAGSVLVYQDIAPEKAQAIMLLAGNG----------------PHAK-------PVSQPK 157

Query: 102 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAKSTGTTTPVSKLESPRIASTMGS-V 160
                                         E  ++ S G T          +AST  +  
Sbjct: 158 PQKLVHHSLPTTDPPTMPPSFLPSISYIVSETRSSGSNGVTGLGPTKTKASLASTRNNQT 217

Query: 161 AATTMIPS-AVPQARKASLARFLEKRKE 187
           AA +M P+  +PQ RKASLARFLEKRKE
Sbjct: 218 AAFSMAPTVGLPQTRKASLARFLEKRKE 245


>AT1G48500.2 | Symbols: JAZ4, TIFY6A | JAZ4 (JASMONATE-ZIM-DOMAIN
           PROTEIN 4) | chr1:17931658-17934255 FORWARD
          Length = 277

 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 64/148 (43%), Gaps = 25/148 (16%)

Query: 42  FIAGTVNVYDDISPEKAQAILFLAGNGSSISSNMAQPKIQVQAPSSKPIATDISPVSQXX 101
           F AG+V VY DI+PEKAQAI+ LAGNG                P +K       PVSQ  
Sbjct: 151 FYAGSVLVYQDIAPEKAQAIMLLAGNG----------------PHAK-------PVSQPK 187

Query: 102 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEILTAKSTGTTTPVSKLESPRIASTMGS-V 160
                                         E  ++ S G T          +AST  +  
Sbjct: 188 PQKLVHHSLPTTDPPTMPPSFLPSISYIVSETRSSGSNGVTGLGPTKTKASLASTRNNQT 247

Query: 161 AATTMIPS-AVPQARKASLARFLEKRKE 187
           AA +M P+  +PQ RKASLARFLEKRKE
Sbjct: 248 AAFSMAPTVGLPQTRKASLARFLEKRKE 275