Jatropha Genome Database

JcCB0577381.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0577381.10 + phase: 0 /pseudo/partial
         (110 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G58080.1 | Symbols: ATATP-PRT1, HISN1A | ATATP-PRT1 (ATP PHOS...    64   2e-11
AT1G09795.1 | Symbols: ATATP-PRT2, HISN1B | ATATP-PRT2 (ATP PHOS...    64   2e-11

>AT1G58080.1 | Symbols: ATATP-PRT1, HISN1A | ATATP-PRT1 (ATP
           PHOSPHORIBOSYL TRANSFERASE 1); ATP
           phosphoribosyltransferase | chr1:21504562-21507429
           REVERSE
          Length = 411

 Score = 63.9 bits (154), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/95 (44%), Positives = 50/95 (52%), Gaps = 17/95 (17%)

Query: 16  RPKVHCSRKLLSGDLDLGIVVLIQSMNMDGGMKILSLFMMLLSMGIAVYPLQYVFCLFSW 75
           RPK    RKLLSGDLDLGIV          G+  LS +      G     L  V    ++
Sbjct: 127 RPK-DIVRKLLSGDLDLGIV----------GLDTLSEY------GQENEDLIIVHEALNF 169

Query: 76  FRCSQLQLIPKYGIFENINSIGELGKMPQWTAEKP 110
             C     IP YGIFENINS+ EL +MPQW+ E+P
Sbjct: 170 GDCHLSIAIPNYGIFENINSLKELAQMPQWSEERP 204


>AT1G09795.1 | Symbols: ATATP-PRT2, HISN1B | ATATP-PRT2 (ATP
           PHOSPHORIBOSYL TRANSFERASE 2); ATP
           phosphoribosyltransferase | chr1:3173588-3176690 FORWARD
          Length = 413

 Score = 63.9 bits (154), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/95 (44%), Positives = 49/95 (51%), Gaps = 17/95 (17%)

Query: 16  RPKVHCSRKLLSGDLDLGIVVLIQSMNMDGGMKILSLFMMLLSMGIAVYPLQYVFCLFSW 75
           RPK    RKLLSGDLDLGIV          G+ I+  F      G     L  V    ++
Sbjct: 129 RPK-DIVRKLLSGDLDLGIV----------GLDIVGEF------GQGNEDLIIVHEALNF 171

Query: 76  FRCSQLQLIPKYGIFENINSIGELGKMPQWTAEKP 110
             C     IP YGIFENI S+ EL +MPQWT E+P
Sbjct: 172 GDCHLSLAIPNYGIFENIKSLKELAQMPQWTEERP 206