Jatropha Genome Database
- JcCB0575821.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0575821.10 + phase: 0 /partial
(185 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G16110.1 | Symbols: ARR2 | ARR2 (ARABIDOPSIS RESPONSE REGULAT... 265 1e-71
AT3G16857.1 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULAT... 263 5e-71
AT3G16857.2 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULAT... 262 7e-71
AT2G25180.1 | Symbols: ARR12 | ARR12 (ARABIDOPSIS RESPONSE REGUL... 201 2e-52
AT1G67710.1 | Symbols: ARR11 | ARR11 (RESPONSE REGULATOR 11); tr... 200 3e-52
AT4G31920.1 | Symbols: ARR10 | ARR10 (ARABIDOPSIS RESPONSE REGUL... 195 1e-50
AT2G01760.1 | Symbols: ARR14 | ARR14 (ARABIDOPSIS RESPONSE REGUL... 187 2e-48
AT5G58080.1 | Symbols: ARR18 | ARR18 (ARABIDOPSIS RESPONSE REGUL... 156 8e-39
AT5G49240.1 | Symbols: APRR4, PRR4 | APRR4 (PSEUDO-RESPONSE REGU... 122 1e-28
AT1G49190.1 | Symbols: ARR19 | ARR19 (ARABIDOPSIS RESPONSE REGUL... 118 3e-27
AT3G62670.1 | Symbols: ARR20, MEE41 | ARR20 (ARABIDOPSIS RESPONS... 107 4e-24
AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS PSE... 98 3e-21
AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS PSEUDO-R... 96 1e-20
AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABIDOPSIS PSEUDO-R... 92 1e-19
AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB E... 91 3e-19
AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE REGUL... 90 8e-19
AT4G18020.3 | Symbols: APRR2, PRR2 | APRR2; transcription factor... 76 1e-14
AT4G18020.2 | Symbols: APRR2, PRR2 | APRR2; transcription factor... 76 1e-14
AT4G18020.1 | Symbols: APRR2, PRR2 | APRR2; transcription factor... 76 1e-14
AT4G18020.5 | Symbols: | APRR2; transcription factor/ two-compo... 76 1e-14
AT4G18020.4 | Symbols: APRR2, PRR2 | APRR2; transcription factor... 76 1e-14
AT1G68210.1 | Symbols: APRR6, PRR6 | APRR6 (PSEUDO-RESPONSE REGU... 69 1e-12
AT5G07210.1 | Symbols: ARR21 | ARR21 (ARABIDOPSIS RESPONSE REGUL... 69 2e-12
AT4G00760.1 | Symbols: APRR8, PRR8 | APRR8 (PSEUDO-RESPONSE REGU... 67 8e-12
AT2G27070.1 | Symbols: ARR13 | ARR13 (ARABIDOPSIS RESPONSE REGUL... 63 1e-10
AT3G48100.1 | Symbols: ARR5, ATRR2, IBC6 | ARR5 (ARABIDOPSIS RES... 60 7e-10
AT1G19050.1 | Symbols: ARR7 | ARR7 (RESPONSE REGULATOR 7); trans... 59 1e-09
AT3G57040.1 | Symbols: ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9)... 58 4e-09
AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | ARR4 (RESPONSE ... 57 5e-09
AT1G59940.1 | Symbols: ARR3 | ARR3 (RESPONSE REGULATOR 3); trans... 57 8e-09
AT1G74890.1 | Symbols: ARR15 | ARR15 (RESPONSE REGULATOR 15); tr... 56 1e-08
AT5G62920.1 | Symbols: ARR6 | ARR6 (RESPONSE REGULATOR 6); trans... 55 2e-08
AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS PSE... 51 4e-07
AT2G40670.1 | Symbols: ARR16, RR16 | ARR16 (ARABIDOPSIS RESPONSE... 47 5e-06
AT3G56380.1 | Symbols: ARR17, RR17 | ARR17 (ARABIDOPSIS RESPONSE... 47 7e-06
AT2G41310.1 | Symbols: ATRR3, ARR8 | ATRR3 (RESPONSE REGULATOR 3... 47 7e-06
>AT4G16110.1 | Symbols: ARR2 | ARR2 (ARABIDOPSIS RESPONSE REGULATOR
2); transcription factor/ two-component response
regulator | chr4:9112979-9115785 FORWARD
Length = 664
Score = 265 bits (678), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/191 (71%), Positives = 153/191 (80%), Gaps = 12/191 (6%)
Query: 1 MNLSNGKGSMSTASSSVAWKAGDVVSDQFPIGLRVLVVDDDPTCLMILEKMLKTCLYKVT 60
+N +G+G S + AG SD FP LRVLVVDDDPTCLMILE+ML TCLY+VT
Sbjct: 2 VNPGHGRGPDSGTA------AGGSNSDPFPANLRVLVVDDDPTCLMILERMLMTCLYRVT 55
Query: 61 KCTRAEQALSMLRENKNGYDIVISDVHMPDMDGFKLLEYIGLEMDLPVIMMSADDGKNVV 120
KC RAE ALS+LR+NKNG+DIVISDVHMPDMDGFKLLE++GLEMDLPVIMMSADD K+VV
Sbjct: 56 KCNRAESALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVV 115
Query: 121 MKGVTHGACDYLIKPVRIEALKNIWQHVVRKKKNEMKDLEQS-GSVEEG----DRQQRQS 175
+KGVTHGA DYLIKPVRIEALKNIWQHVVRKK+NE E S GS+E+ DRQQ+
Sbjct: 116 LKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHR 175
Query: 176 EDAD-YSSSVN 185
EDAD SSSVN
Sbjct: 176 EDADNNSSSVN 186
>AT3G16857.1 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULATOR
1); transcription factor/ two-component response
regulator | chr3:5756113-5758853 FORWARD
Length = 669
Score = 263 bits (672), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 149/180 (82%), Gaps = 15/180 (8%)
Query: 21 AGDVVSDQFPIGLRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYD 80
G+ V + FP GLRVLVVDDDPTCLMILE+ML+TCLY+VTKC RAE ALS+LR+NK+G+D
Sbjct: 25 GGETVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFD 84
Query: 81 IVISDVHMPDMDGFKLLEYIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEA 140
IVISDVHMPDMDGFKLLE++GLEMDLPVIMMSADD K+VV+KGVTHGA DYLIKPVR+EA
Sbjct: 85 IVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEA 144
Query: 141 LKNIWQHVVRKKKNEMKDLEQSGSVEE-GDRQQRQ------------SEDA--DYSSSVN 185
LKNIWQHVVRK+++E E SGS+EE G+RQQ+Q EDA D SSSVN
Sbjct: 145 LKNIWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVN 204
>AT3G16857.2 | Symbols: ARR1 | ARR1 (ARABIDOPSIS RESPONSE REGULATOR
1); transcription factor/ two-component response
regulator | chr3:5756113-5759139 FORWARD
Length = 690
Score = 262 bits (670), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 129/180 (71%), Positives = 149/180 (82%), Gaps = 15/180 (8%)
Query: 21 AGDVVSDQFPIGLRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYD 80
G+ V + FP GLRVLVVDDDPTCLMILE+ML+TCLY+VTKC RAE ALS+LR+NK+G+D
Sbjct: 25 GGETVVEMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFD 84
Query: 81 IVISDVHMPDMDGFKLLEYIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEA 140
IVISDVHMPDMDGFKLLE++GLEMDLPVIMMSADD K+VV+KGVTHGA DYLIKPVR+EA
Sbjct: 85 IVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEA 144
Query: 141 LKNIWQHVVRKKKNEMKDLEQSGSVEE-GDRQQRQ------------SEDA--DYSSSVN 185
LKNIWQHVVRK+++E E SGS+EE G+RQQ+Q EDA D SSSVN
Sbjct: 145 LKNIWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVN 204
>AT2G25180.1 | Symbols: ARR12 | ARR12 (ARABIDOPSIS RESPONSE
REGULATOR 12); transcription factor/ two-component
response regulator | chr2:10724490-10726961 REVERSE
Length = 596
Score = 201 bits (512), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 111/142 (78%)
Query: 27 DQFPIGLRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYDIVISDV 86
DQFP+G+RVL VDDD TCL ILE +L+ C Y VT +A++AL +LRENKN +D+VISDV
Sbjct: 11 DQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDV 70
Query: 87 HMPDMDGFKLLEYIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQ 146
MPDMDGFKLLE +GLEMDLPVIM+SA VMKGVTHGACDYL+KPVRIE LKNIWQ
Sbjct: 71 DMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQ 130
Query: 147 HVVRKKKNEMKDLEQSGSVEEG 168
HVVR + ++ + +G +G
Sbjct: 131 HVVRSRFDKNRGSNNNGDKRDG 152
>AT1G67710.1 | Symbols: ARR11 | ARR11 (RESPONSE REGULATOR 11);
transcription factor/ two-component response regulator |
chr1:25376994-25378905 REVERSE
Length = 521
Score = 200 bits (509), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 94/134 (70%), Positives = 112/134 (83%)
Query: 30 PIGLRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYDIVISDVHMP 89
P+GLRVLVVDDDPT L ILEKMLK C Y+VT C A +AL +LRE K+GYDIVISDV+MP
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 90 DMDGFKLLEYIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVV 149
DMDGFKLLE++GLE+DLPVIMMS D + VMKGV HGACDYL+KP+R++ LK IWQHV+
Sbjct: 68 DMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVL 127
Query: 150 RKKKNEMKDLEQSG 163
RKK E++D+E G
Sbjct: 128 RKKLQEVRDIEGCG 141
>AT4G31920.1 | Symbols: ARR10 | ARR10 (ARABIDOPSIS RESPONSE
REGULATOR 10); transcription factor/ two-component
response regulator | chr4:15444290-15446766 REVERSE
Length = 552
Score = 195 bits (496), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 89/126 (70%), Positives = 102/126 (80%)
Query: 25 VSDQFPIGLRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYDIVIS 84
V DQFP+G+RVL VDDD TCL IL+ +L+ C Y VT +A+ AL +LRENKN +D+VIS
Sbjct: 9 VLDQFPVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVIS 68
Query: 85 DVHMPDMDGFKLLEYIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNI 144
DV MPDMDGFKLLE +GLEMDLPVIM+SA VMKGV HGACDYL+KPVRIE LKNI
Sbjct: 69 DVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNI 128
Query: 145 WQHVVR 150
WQHVVR
Sbjct: 129 WQHVVR 134
>AT2G01760.1 | Symbols: ARR14 | ARR14 (ARABIDOPSIS RESPONSE
REGULATOR 14); transcription factor/ two-component
response regulator | chr2:333041-334514 FORWARD
Length = 382
Score = 187 bits (476), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 87/144 (60%), Positives = 113/144 (78%), Gaps = 1/144 (0%)
Query: 25 VSDQFPIGLRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYDIVIS 84
++DQFP GLR+LVVDDD +CL ILEKML +Y+VT C++A+ AL++LRE K+ +D+V+S
Sbjct: 3 INDQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLS 62
Query: 85 DVHMPDMDGFKLLEYIG-LEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKN 143
DVHMP M+G+ LL+ +G LEMDLPVIMMS D VM G+ HGACDYLIKP+R E LKN
Sbjct: 63 DVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKN 122
Query: 144 IWQHVVRKKKNEMKDLEQSGSVEE 167
IWQHVVR+K K+L S ++E+
Sbjct: 123 IWQHVVRRKCVMKKELRSSQALED 146
>AT5G58080.1 | Symbols: ARR18 | ARR18 (ARABIDOPSIS RESPONSE
REGULATOR 18); transcription factor/ two-component
response regulator | chr5:23501785-23504099 REVERSE
Length = 618
Score = 156 bits (394), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 102/144 (70%), Gaps = 4/144 (2%)
Query: 33 LRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYDIVISDVHMPDMD 92
+RVL VDD+PTCL LE++L C Y VTK + +AL MLREN N +D+VISDV MPD D
Sbjct: 1 MRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTD 60
Query: 93 GFKLLEYIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKK 152
GFKLLE IGLEMDLPVIM+SA + VMKG+ HGACDYL+KPV ++ L+NIW HVV+K
Sbjct: 61 GFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKKN 119
Query: 153 KNEMKDL---EQSGSVEEGDRQQR 173
L +S SV R+++
Sbjct: 120 IKSYAKLLPPSESDSVPSASRKRK 143
>AT5G49240.1 | Symbols: APRR4, PRR4 | APRR4 (PSEUDO-RESPONSE
REGULATOR 4); transcription factor/ two-component
response regulator | chr5:19962934-19964351 FORWARD
Length = 292
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 88/131 (67%)
Query: 23 DVVSDQFPIGLRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYDIV 82
D+ S FP GLRVLV D+DP+ L+ILE+ L+ Y+VT C +A+ LR ++N +D+
Sbjct: 32 DMFSSNFPEGLRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLA 91
Query: 83 ISDVHMPDMDGFKLLEYIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALK 142
+ V+ + D F+ L IG EMDLP+I++S DD V K + +GA DYLIKP+R E L+
Sbjct: 92 MIQVNNAEGDIFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLR 151
Query: 143 NIWQHVVRKKK 153
+++H+V+K +
Sbjct: 152 IVFKHLVKKMR 162
>AT1G49190.1 | Symbols: ARR19 | ARR19 (ARABIDOPSIS RESPONSE
REGULATOR 19); transcription factor/ two-component
response regulator | chr1:18191342-18193598 FORWARD
Length = 608
Score = 118 bits (295), Expect = 3e-27, Method: Composition-based stats.
Identities = 58/125 (46%), Positives = 86/125 (68%)
Query: 28 QFPIGLRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYDIVISDVH 87
QFP VLVVD + T L+ +++++K Y+V+ T AE+AL+ L K+ +IVI D H
Sbjct: 29 QFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHEINIVIWDFH 88
Query: 88 MPDMDGFKLLEYIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQH 147
MP +DG + L+ I ++DLPV++MS D+ VMK +GACDY++KPV+ E + NIWQH
Sbjct: 89 MPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQH 148
Query: 148 VVRKK 152
+VRK+
Sbjct: 149 IVRKR 153
>AT3G62670.1 | Symbols: ARR20, MEE41 | ARR20 (ARABIDOPSIS RESPONSE
REGULATOR 20); transcription factor/ two-component
response regulator | chr3:23176556-23178294 REVERSE
Length = 426
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 86/135 (63%), Gaps = 4/135 (2%)
Query: 34 RVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYDIVISDVHMPDMDG 93
RVL+V D L+ ++ Y+VTK E+A++ L +NK+ D+VI D HMPD++G
Sbjct: 42 RVLLVGADSNS--SLKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIWDFHMPDING 99
Query: 94 FKLLEYIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKK- 152
L IG +MDLPV++MS + K VM+ + +GACD+L+KPV E + +W+HV RK+
Sbjct: 100 LDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYRKRM 159
Query: 153 -KNEMKDLEQSGSVE 166
K+ + +SG+VE
Sbjct: 160 SKSGLDKPGESGTVE 174
>AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding /
transcription regulator/ two-component response
regulator | chr2:19232874-19234901 FORWARD
Length = 468
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 77/123 (62%), Gaps = 5/123 (4%)
Query: 33 LRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYDIVISDVHMPDMD 92
LRVL+V+ D + I+ +L+ C YKV + A +L+E + D++++++ +P +
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSIS 96
Query: 93 GFKLLEYIGLEMD----LPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHV 148
GF LL + +E + +PVIMMS+ D +V+K + GA DYLIKP+R LKN+WQHV
Sbjct: 97 GFALLALV-MEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHV 155
Query: 149 VRK 151
R+
Sbjct: 156 WRR 158
>AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 5); transcription regulator/
two-component response regulator | chr5:8356204-8358873
REVERSE
Length = 667
Score = 96.3 bits (238), Expect = 1e-20, Method: Composition-based stats.
Identities = 50/132 (37%), Positives = 77/132 (58%), Gaps = 5/132 (3%)
Query: 31 IGLRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYDIVISDVHMPD 90
I LRVL+V+ D + I+ +L+ C Y+V +A ML+ D+++++V +P
Sbjct: 157 IALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPS 216
Query: 91 MDGFKLLEYIGLEMDL----PVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQ 146
+ G+ LL I +E D+ PVIMMS D N V K + GA DYL+KP+R L+N+WQ
Sbjct: 217 ISGYALLTLI-MEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRNELRNLWQ 275
Query: 147 HVVRKKKNEMKD 158
HV R++ + D
Sbjct: 276 HVWRRQTSLAPD 287
>AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 3); transcription regulator/
two-component response regulator |
chr5:24198215-24200502 REVERSE
Length = 495
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 78/127 (61%), Gaps = 4/127 (3%)
Query: 29 FPI-GLRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYDIVISDVH 87
P+ L+VL+V++D + I+ +LK C Y+VT +A +L + K+ D+V+++V
Sbjct: 59 LPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVD 118
Query: 88 MPDMDGFKLLEYIGLEM---DLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNI 144
MP G LL I ++PVIMMS+ D +V K +++GA D+L+KP+R LKN+
Sbjct: 119 MPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNL 178
Query: 145 WQHVVRK 151
WQHV R+
Sbjct: 179 WQHVWRR 185
>AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB
EXPRESSION 1); transcription regulator/ two-component
response regulator | chr5:24675540-24678176 FORWARD
Length = 618
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 20 KAGDVVSDQFPIGLRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGY 79
K GD D+ + R+L+ D+D T L + +L C Y+VT A Q + L
Sbjct: 8 KGGDGFIDRSRV--RILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDI 65
Query: 80 DIVISDVHMPDMDGFKLLEYIGLEMDL---PVIMMSADDGKNVVMKGVTHGACDYLIKPV 136
DI+++++ +P G K+L YI + DL PVIMMS D VV+K + GA DYL+KP+
Sbjct: 66 DIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPL 125
Query: 137 RIEALKNIWQHVVRKKK 153
R L N+W H+ R+++
Sbjct: 126 RTNELLNLWTHMWRRRR 142
>AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE
REGULATOR 7); transcription regulator/ two-component
response regulator | chr5:638283-641461 REVERSE
Length = 727
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 74/122 (60%), Gaps = 3/122 (2%)
Query: 33 LRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYDIVISDVHMPDMD 92
+RVL+V++D I+ +L+ C Y+V + + QA +L + N DIV+++V MP +
Sbjct: 78 IRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLS 137
Query: 93 GFKLLEYI---GLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVV 149
G LL I ++PVIMMS+ D +V K ++ GA D+L+KP+R LK +WQHV
Sbjct: 138 GIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVW 197
Query: 150 RK 151
R+
Sbjct: 198 RR 199
>AT4G18020.3 | Symbols: APRR2, PRR2 | APRR2; transcription factor/
two-component response regulator |
chr4:10003738-10006682 REVERSE
Length = 535
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 27 DQFPIGLRVLVV------DDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYD 80
+ FP GL+VL++ D D + L++ Y VT T +ALS + +N +
Sbjct: 12 ENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFH 71
Query: 81 IVISDVHM-PDMDGFKLLEYIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIE 139
I I +V+M + + FK LE + LP IM+S D MK + GA ++L KP+ E
Sbjct: 72 IAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129
Query: 140 ALKNIWQHVVRKKKNE 155
LKNIWQHVV K N+
Sbjct: 130 KLKNIWQHVVHKAFND 145
>AT4G18020.2 | Symbols: APRR2, PRR2 | APRR2; transcription factor/
two-component response regulator |
chr4:10003738-10006682 REVERSE
Length = 535
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 27 DQFPIGLRVLVV------DDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYD 80
+ FP GL+VL++ D D + L++ Y VT T +ALS + +N +
Sbjct: 12 ENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFH 71
Query: 81 IVISDVHM-PDMDGFKLLEYIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIE 139
I I +V+M + + FK LE + LP IM+S D MK + GA ++L KP+ E
Sbjct: 72 IAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129
Query: 140 ALKNIWQHVVRKKKNE 155
LKNIWQHVV K N+
Sbjct: 130 KLKNIWQHVVHKAFND 145
>AT4G18020.1 | Symbols: APRR2, PRR2 | APRR2; transcription factor/
two-component response regulator |
chr4:10003738-10006682 REVERSE
Length = 535
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 27 DQFPIGLRVLVV------DDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYD 80
+ FP GL+VL++ D D + L++ Y VT T +ALS + +N +
Sbjct: 12 ENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFH 71
Query: 81 IVISDVHM-PDMDGFKLLEYIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIE 139
I I +V+M + + FK LE + LP IM+S D MK + GA ++L KP+ E
Sbjct: 72 IAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129
Query: 140 ALKNIWQHVVRKKKNE 155
LKNIWQHVV K N+
Sbjct: 130 KLKNIWQHVVHKAFND 145
>AT4G18020.5 | Symbols: | APRR2; transcription factor/
two-component response regulator |
chr4:10003991-10006682 REVERSE
Length = 487
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 27 DQFPIGLRVLVV------DDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYD 80
+ FP GL+VL++ D D + L++ Y VT T +ALS + +N +
Sbjct: 12 ENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFH 71
Query: 81 IVISDVHM-PDMDGFKLLEYIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIE 139
I I +V+M + + FK LE + LP IM+S D MK + GA ++L KP+ E
Sbjct: 72 IAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129
Query: 140 ALKNIWQHVVRKKKNE 155
LKNIWQHVV K N+
Sbjct: 130 KLKNIWQHVVHKAFND 145
>AT4G18020.4 | Symbols: APRR2, PRR2 | APRR2; transcription factor/
two-component response regulator |
chr4:10003991-10006682 REVERSE
Length = 487
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 27 DQFPIGLRVLVV------DDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYD 80
+ FP GL+VL++ D D + L++ Y VT T +ALS + +N +
Sbjct: 12 ENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEALSAVVKNPESFH 71
Query: 81 IVISDVHM-PDMDGFKLLEYIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIE 139
I I +V+M + + FK LE + LP IM+S D MK + GA ++L KP+ E
Sbjct: 72 IAIVEVNMSAESESFKFLE--AAKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPE 129
Query: 140 ALKNIWQHVVRKKKNE 155
LKNIWQHVV K N+
Sbjct: 130 KLKNIWQHVVHKAFND 145
>AT1G68210.1 | Symbols: APRR6, PRR6 | APRR6 (PSEUDO-RESPONSE
REGULATOR 6); transcription regulator/ two-component
response regulator | chr1:25565983-25569302 FORWARD
Length = 755
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Query: 33 LRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYDIVISDVHMPDMD 92
+ +L++D D + L ML+ +V A +ALSM+ + K ++I+++ MP +D
Sbjct: 13 ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72
Query: 93 GFKLLEYIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKK 152
L + L+ D+P+I+++ + +T AC L KP+ + +KN+WQHV KK
Sbjct: 73 SHSFLNALLLK-DIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKNMWQHVFSKK 131
Query: 153 KNEMKDL 159
E+K +
Sbjct: 132 SQELKKI 138
>AT5G07210.1 | Symbols: ARR21 | ARR21 (ARABIDOPSIS RESPONSE
REGULATOR 21); transcription factor/ two-component
response regulator | chr5:2252237-2256018 FORWARD
Length = 621
Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 11/146 (7%)
Query: 33 LRVLVVDDDPTCLMILEKMLKTCLYK--------VTKCTRAEQALSMLRENKNGYDIVIS 84
+ V+VVDDD L I+ +ML+ Y+ V ++ALS L+ ++ D++I+
Sbjct: 16 INVMVVDDDHVFLDIMSRMLQHSKYRDPSVMEIAVIAVDDPKKALSTLKIQRDNIDLIIT 75
Query: 85 DVHMPDMDGFKLLEYIGLEM-DLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKN 143
D +MP M+G +L + I E +LPV++MS+D K + ++ GA ++ KP+ L
Sbjct: 76 DYYMPGMNGLQLKKQITQEFGNLPVLVMSSDTNKE--EESLSCGAMGFIPKPIHPTDLTK 133
Query: 144 IWQHVVRKKKNEMKDLEQSGSVEEGD 169
I+Q + K+N L + ++ D
Sbjct: 134 IYQFALSNKRNGKSTLSTEQNHKDAD 159
>AT4G00760.1 | Symbols: APRR8, PRR8 | APRR8 (PSEUDO-RESPONSE
REGULATOR 8); transcription regulator/ two-component
response regulator | chr4:327236-329048 REVERSE
Length = 367
Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 73/129 (56%), Gaps = 1/129 (0%)
Query: 26 SDQFPIGLRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSMLRENKNGYDIVISD 85
+++F + VL++D D TCL L +M++ C YKV TRA+ ++ D+V+++
Sbjct: 7 TERFSNDICVLLLDSDATCLANLSEMIRKCGYKVVATTRADDLPLIINNKDKKIDLVLAE 66
Query: 86 VHMPDMDGFKLLEYIGLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIW 145
+ +M+ ++LLE I ++PV++ A K+ +++ + GA L KP+ K +W
Sbjct: 67 FRLIEMNKYELLEKIRSICEIPVVVSGA-HVKDAIVECLCRGAKLCLEKPLMENDFKILW 125
Query: 146 QHVVRKKKN 154
Q V +++N
Sbjct: 126 QFTVSRQRN 134
>AT2G27070.1 | Symbols: ARR13 | ARR13 (ARABIDOPSIS RESPONSE
REGULATOR 13); transcription factor/ two-component
response regulator | chr2:11555781-11560215 REVERSE
Length = 575
Score = 62.8 bits (151), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 71/126 (56%), Gaps = 6/126 (4%)
Query: 33 LRVLVVDDDPTCLMILEKMLKTCLYK---VTKCTRAEQALSMLRENKNGYDIVISDVHMP 89
+ V+VVDD+ L I +ML+ Y+ V ++ALS L+ ++ D++I+D +MP
Sbjct: 16 INVMVVDDNRVFLDIWSRMLEKSKYREITVIAVDYPKKALSTLKNQRDNIDLIITDYYMP 75
Query: 90 DMDGFKLLEYIGLEM-DLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHV 148
M+G +L + I E +L V++MS+D K + ++ GA ++ KP+ L I+Q
Sbjct: 76 GMNGLQLKKQITQEFGNLSVLVMSSDPNKE--EESLSCGAMGFIPKPIAPTDLPKIYQFA 133
Query: 149 VRKKKN 154
+ K+N
Sbjct: 134 LTYKRN 139
>AT3G48100.1 | Symbols: ARR5, ATRR2, IBC6 | ARR5 (ARABIDOPSIS
RESPONSE REGULATOR 5); transcription regulator/
two-component response regulator |
chr3:17759112-17760740 REVERSE
Length = 184
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 85/162 (52%), Gaps = 13/162 (8%)
Query: 21 AGDVVSDQFPIGLRVLVVDDDPTCLMILEKMLKTCLYKVT---KCTRAEQALSMLRENKN 77
+ D S P L VL VDD +E++L+ KVT TRA Q L + EN +
Sbjct: 13 SNDTSSLASPKLLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNS 72
Query: 78 --GYD-----IVISDVHMPDMDGFKLLEYI---GLEMDLPVIMMSADDGKNVVMKGVTHG 127
G++ ++++D MP M G++LL+ I ++PV++MS+++ + + + G
Sbjct: 73 SVGFEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEG 132
Query: 128 ACDYLIKPVRIEALKNIWQHVVRKKKNEMKDLEQSGSVEEGD 169
A D+L+KPV++ +K + +++ ++ K++ +E D
Sbjct: 133 AEDFLLKPVKLADVKRLRDSLMKAEERAFKNIMHKRELEAND 174
>AT1G19050.1 | Symbols: ARR7 | ARR7 (RESPONSE REGULATOR 7);
transcription regulator/ two-component response
regulator | chr1:6577919-6579078 REVERSE
Length = 206
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 25/164 (15%)
Query: 22 GDVVSDQFPIG---------LRVLVVDDDPTCLMILEKMLKTCLYKVTKC---TRAEQAL 69
G+V+ + P G L VL VDD ++E++L+ KVT TRA Q L
Sbjct: 4 GEVMRMEIPAGGDLTVTTPELHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYL 63
Query: 70 SM--------LRENKNGYDIVISDVHMPDMDGFKLLEYI---GLEMDLPVIMMSADDGKN 118
+ L++ K +++++D MP + G+ LL+ I ++PV++MS+++
Sbjct: 64 GLDGGKGASNLKDLK--VNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILP 121
Query: 119 VVMKGVTHGACDYLIKPVRIEALKNIWQHVVRKKKNEMKDLEQS 162
+ + + GA ++L+KPV++ +K I Q ++R + E K L S
Sbjct: 122 RIQECLKEGAEEFLLKPVKLADVKRIKQLIMRNEAEECKILSHS 165
>AT3G57040.1 | Symbols: ARR9, ATRR4 | ARR9 (RESPONSE REGULATOR 9);
transcription regulator/ two-component response
regulator | chr3:21110059-21111228 FORWARD
Length = 234
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 24/160 (15%)
Query: 33 LRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSML--RENKNGYD---------- 80
VL VDD ++E++L+ +VT +AL L R++ + D
Sbjct: 9 FHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPVN 68
Query: 81 -------IVISDVHMPDMDGFKLLEYI---GLEMDLPVIMMSADDGKNVVMKGVTHGACD 130
++I+D MP M G+ LL+ + D+PV++MS+++ + + + GA +
Sbjct: 69 HQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEE 128
Query: 131 YLIKPVRIEALKNIWQHVVRKK-KNE-MKDLEQSGSVEEG 168
+ +KPVR+ L + H+++ K KN+ ++++E + VE G
Sbjct: 129 FFLKPVRLADLNKLKPHMMKTKLKNQKLEEIETTSKVENG 168
>AT1G10470.1 | Symbols: ARR4, MEE7, ATRR1, IBC7 | ARR4 (RESPONSE
REGULATOR 4); protein binding / transcription regulator/
two-component response regulator | chr1:3442624-3443759
REVERSE
Length = 259
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 71/133 (53%), Gaps = 12/133 (9%)
Query: 33 LRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSML---------RENKNGYDIVI 83
+ VL VDD +++E++L+ KVT +AL L ++ D++I
Sbjct: 34 VHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDNEKASAEFDRLKVDLII 93
Query: 84 SDVHMPDMDGFKLLEYIGLE---MDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEA 140
+D MP M G++LL+ I ++PV++MS+++ + + + GA D+L+KPV++
Sbjct: 94 TDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDFLLKPVKLAD 153
Query: 141 LKNIWQHVVRKKK 153
+K + H+ + K
Sbjct: 154 VKRLRSHLTKDVK 166
>AT1G59940.1 | Symbols: ARR3 | ARR3 (RESPONSE REGULATOR 3);
transcription regulator/ two-component response
regulator | chr1:22065894-22066895 REVERSE
Length = 231
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 74/140 (52%), Gaps = 16/140 (11%)
Query: 26 SDQFPIGLRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSML---------RENK 76
SDQ + VL VDD +++E++L+ KVT +AL L ++
Sbjct: 30 SDQ----VHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDDKAAVEFDR 85
Query: 77 NGYDIVISDVHMPDMDGFKLLEYIGLEM---DLPVIMMSADDGKNVVMKGVTHGACDYLI 133
D++I+D MP M G++LL+ I ++PV++MS+++ + + + GA D+L+
Sbjct: 86 LKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLL 145
Query: 134 KPVRIEALKNIWQHVVRKKK 153
KPV++ +K + ++ R K
Sbjct: 146 KPVKLADVKRLRSYLTRDVK 165
>AT1G74890.1 | Symbols: ARR15 | ARR15 (RESPONSE REGULATOR 15);
transcription regulator/ two-component response
regulator | chr1:28131590-28132710 REVERSE
Length = 206
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 74/130 (56%), Gaps = 12/130 (9%)
Query: 33 LRVLVVDDDPTCLMILEKMLKTCLYKVTKC---TRAEQALSMLRENKNG------YDIVI 83
L VL VDD ++E++LK KVT TRA Q L + +N + ++++
Sbjct: 18 LHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLKVNLIV 77
Query: 84 SDVHMPDMDGFKLLEYI---GLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVRIEA 140
+D MP + G++LL+ I ++PV++MS+++ + + + + GA ++L+KPV++
Sbjct: 78 TDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKPVKLAD 137
Query: 141 LKNIWQHVVR 150
+K + + ++R
Sbjct: 138 VKRLKELIMR 147
>AT5G62920.1 | Symbols: ARR6 | ARR6 (RESPONSE REGULATOR 6);
transcription regulator/ two-component response
regulator | chr5:25252745-25254158 REVERSE
Length = 186
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 84/152 (55%), Gaps = 17/152 (11%)
Query: 30 PIGLRVLVVDDDPTCLMILEKMLKTCLYKVT---KCTRAEQALSMLRENKN-GYD----- 80
P L VL VDD +E++L+ KVT TRA Q L + E K+ G++
Sbjct: 22 PDPLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDVEEKSVGFEDLKVN 81
Query: 81 IVISDVHMPDMDGFKLLEYI---GLEMDLPVIMMSADDGKNVVMKGVTHGACDYLIKPVR 137
++++D MP M G++LL+ I ++PV++MS+++ + + + GA D+L+KPV+
Sbjct: 82 LIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAEDFLLKPVK 141
Query: 138 IEALKNIWQHVVRKKKNEMKDLEQSGSVEEGD 169
+ +K + +++ ++DL + S+++ +
Sbjct: 142 LSDVKRLRDSLMK-----VEDLSFTKSIQKRE 168
>AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding /
transcription regulator/ two-component response
regulator | chr2:19233422-19234901 FORWARD
Length = 351
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 111 MSADDGKNVVMKGVTHGACDYLIKPVRIEALKNIWQHVVRK 151
MS+ D +V+K + GA DYLIKP+R LKN+WQHV R+
Sbjct: 1 MSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRR 41
>AT2G40670.1 | Symbols: ARR16, RR16 | ARR16 (ARABIDOPSIS RESPONSE
REGULATOR 16); transcription regulator/ two-component
response regulator | chr2:16970258-16971120 FORWARD
Length = 164
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 33 LRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSM------------LRENKNGYD 80
L VL VDD+ ++E++LK KVT A +AL L N
Sbjct: 29 LHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKVS 88
Query: 81 IVISDVHMPDMDGFKLLEYIGLEMDL---PVIMMSADDGKNVVMKGVTHGACDYLIKPVR 137
++I+D MP M GF+LL+ + +L PV++MS+++ + K + GA ++ KP++
Sbjct: 89 LIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKPLK 148
Query: 138 IEALKNIWQHVV 149
+ ++ + H++
Sbjct: 149 LADVEKLKCHLM 160
>AT3G56380.1 | Symbols: ARR17, RR17 | ARR17 (ARABIDOPSIS RESPONSE
REGULATOR 17); transcription regulator/ two-component
response regulator | chr3:20905480-20906368 FORWARD
Length = 153
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 33 LRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSML----------RENKNGYDIV 82
L VL VDD+ ++E++LK KVT +AL L N +++
Sbjct: 20 LHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGDPQQTDSLTNVMKVNLI 79
Query: 83 ISDVHMPDMDGFKLLEYIGLEMDL---PVIMMSADDGKNVVMKGVTHGACDYLIKPVRIE 139
I+D MP M GF+LL+ + +L PV+++S+++ + K + GA ++ KP+++
Sbjct: 80 ITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLASGAQMFMQKPLKLS 139
Query: 140 ALKNIWQHVV 149
++ + H++
Sbjct: 140 DVEKLKCHLL 149
>AT2G41310.1 | Symbols: ATRR3, ARR8 | ATRR3 (RESPONSE REGULATOR 3);
transcription regulator/ two-component response
regulator | chr2:17222280-17223536 FORWARD
Length = 225
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 22/155 (14%)
Query: 33 LRVLVVDDDPTCLMILEKMLKTCLYKVTKCTRAEQALSML--RENKNG------------ 78
VL VDD ++E++L+ +VT +AL L R + N
Sbjct: 9 FHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQ 68
Query: 79 ---YDIVISDVHMPDMDGFKLLEYI---GLEMDLPVIMMSADDGKNVVMKGVTHGACDYL 132
+++I+D MP M G+ LL+ + +PV++MS+++ + + + GA ++
Sbjct: 69 EVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFF 128
Query: 133 IKPVRIEALKNIWQHVVRKKKNEMKDLEQSGSVEE 167
+KPV++ L + H+++ K K+ E+ ++EE
Sbjct: 129 LKPVKLADLTKLKPHMMKTKLK--KESEKPVAIEE 161