Jatropha Genome Database
- JcCB0574741.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0574741.10 + phase: 2 /partial
(260 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G64610.2 | Symbols: | WD-40 repeat family protein | chr1:239... 304 4e-83
AT1G64610.1 | Symbols: | WD-40 repeat family protein | chr1:239... 304 4e-83
AT5G24320.1 | Symbols: | WD-40 repeat family protein | chr5:828... 303 8e-83
AT5G24320.2 | Symbols: | WD-40 repeat family protein | chr5:828... 303 9e-83
AT5G53500.1 | Symbols: | WD-40 repeat family protein | chr5:217... 292 1e-79
AT5G42010.1 | Symbols: | WD-40 repeat family protein | chr5:168... 289 1e-78
AT5G54200.1 | Symbols: | WD-40 repeat family protein | chr5:219... 238 3e-63
AT3G15470.1 | Symbols: | WD-40 repeat family protein | chr3:521... 231 4e-61
AT1G48870.1 | Symbols: | WD-40 repeat family protein | chr1:180... 215 2e-56
AT5G02430.1 | Symbols: | WD-40 repeat family protein | chr5:526... 200 6e-52
AT2G37670.1 | Symbols: | WD-40 repeat family protein | chr2:157... 182 2e-46
AT4G02730.1 | Symbols: | transducin family protein / WD-40 repe... 63 2e-10
AT3G49660.1 | Symbols: | transducin family protein / WD-40 repe... 60 1e-09
AT2G40360.1 | Symbols: | transducin family protein / WD-40 repe... 53 2e-07
AT1G18080.1 | Symbols: ATARCA, RACK1A_AT | ATARCA; nucleotide bi... 53 2e-07
AT2G33340.2 | Symbols: | nucleotide binding / ubiquitin-protein... 50 1e-06
AT2G33340.1 | Symbols: | nucleotide binding / ubiquitin-protein... 50 1e-06
AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchles... 50 1e-06
AT3G18130.1 | Symbols: RACK1C_AT | RACK1C_AT (RECEPTOR FOR ACTIV... 50 2e-06
AT1G48630.1 | Symbols: RACK1B_AT | RACK1B_AT (RECEPTOR FOR ACTIV... 49 3e-06
AT2G16405.1 | Symbols: | transducin family protein / WD-40 repe... 49 5e-06
>AT1G64610.2 | Symbols: | WD-40 repeat family protein |
chr1:23998920-24001297 REVERSE
Length = 647
Score = 304 bits (778), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 141/242 (58%), Positives = 182/242 (75%), Gaps = 2/242 (0%)
Query: 4 QMVRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIES 63
Q+ RV+++KK+FKELS++ + QE +AH+GSIL MKFSPDG+Y+ASAGED +VRVW + E
Sbjct: 191 QVARVQTHKKQFKELSSMCIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEE 250
Query: 64 ERSDEFGRLDIDPSHVYFTVNSHSEVVPLHADKEKNSKFKD-LRKNSHSACVILPQKIFQ 122
ER+D + ++D S VYF +N S++ PL + EK K LRK+S S CV+LP IF
Sbjct: 251 ERTDTYEVAEVD-SGVYFGMNQRSQIEPLKINNEKTEKKSSFLRKSSDSTCVVLPPTIFS 309
Query: 123 ISEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVTCVQ 182
ISEKP+HEF GH GE+LDLSWS+ Y+LSSS D+TVRLW+VGC+ CL+ F+HNN+VTCV
Sbjct: 310 ISEKPLHEFKGHIGEILDLSWSEKGYLLSSSVDETVRLWRVGCDECLRTFTHNNFVTCVA 369
Query: 183 FNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTGNCR 242
FNP+ KVRIW + C+V+D+ DI +IVTAVCYRPD KG V+GSMTGNCR
Sbjct: 370 FNPVDDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAKGAVIGSMTGNCR 429
Query: 243 FY 244
FY
Sbjct: 430 FY 431
>AT1G64610.1 | Symbols: | WD-40 repeat family protein |
chr1:23998920-24001297 REVERSE
Length = 647
Score = 304 bits (778), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 141/242 (58%), Positives = 182/242 (75%), Gaps = 2/242 (0%)
Query: 4 QMVRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIES 63
Q+ RV+++KK+FKELS++ + QE +AH+GSIL MKFSPDG+Y+ASAGED +VRVW + E
Sbjct: 191 QVARVQTHKKQFKELSSMCIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEE 250
Query: 64 ERSDEFGRLDIDPSHVYFTVNSHSEVVPLHADKEKNSKFKD-LRKNSHSACVILPQKIFQ 122
ER+D + ++D S VYF +N S++ PL + EK K LRK+S S CV+LP IF
Sbjct: 251 ERTDTYEVAEVD-SGVYFGMNQRSQIEPLKINNEKTEKKSSFLRKSSDSTCVVLPPTIFS 309
Query: 123 ISEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVTCVQ 182
ISEKP+HEF GH GE+LDLSWS+ Y+LSSS D+TVRLW+VGC+ CL+ F+HNN+VTCV
Sbjct: 310 ISEKPLHEFKGHIGEILDLSWSEKGYLLSSSVDETVRLWRVGCDECLRTFTHNNFVTCVA 369
Query: 183 FNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTGNCR 242
FNP+ KVRIW + C+V+D+ DI +IVTAVCYRPD KG V+GSMTGNCR
Sbjct: 370 FNPVDDNYFISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVCYRPDAKGAVIGSMTGNCR 429
Query: 243 FY 244
FY
Sbjct: 430 FY 431
>AT5G24320.1 | Symbols: | WD-40 repeat family protein |
chr5:8284858-8287651 REVERSE
Length = 694
Score = 303 bits (775), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 139/254 (54%), Positives = 183/254 (72%), Gaps = 1/254 (0%)
Query: 1 ARAQMVRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQV 60
+R + V+V+ YKK KELSAL+ GQE+ AHEG+IL MKFSPDG+YLASAGEDG++RVW V
Sbjct: 221 SRIERVKVKEYKKEAKELSALFKGQEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSV 280
Query: 61 IESERSDEFGRLDIDPSHVYFTVNSHSEVVPLHADKEK-NSKFKDLRKNSHSACVILPQK 119
+E ER +E IDPS +YF V+ SE+ P+ +K+ RK + SACVI+P K
Sbjct: 281 VEDERCEEHDVPKIDPSCIYFEVSKLSELRPVAVEKDGITGSLMSPRKTTESACVIIPPK 340
Query: 120 IFQISEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVT 179
IF++ +KP+HEF GH G++LD+SWSKN +LS+S D +VRLWQ+GC CL +FSHNNYVT
Sbjct: 341 IFRVLDKPLHEFLGHSGDILDISWSKNNRLLSASVDNSVRLWQIGCEDCLGIFSHNNYVT 400
Query: 180 CVQFNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTG 239
VQFNP+ KVRIW+ CQV+DW D IVTAVCY+PDG+ +++G++T
Sbjct: 401 SVQFNPVDDDHFISGSIDGKVRIWSASQCQVVDWADARGIVTAVCYQPDGQAVIIGTLTS 460
Query: 240 NCRFYDASGMSLFL 253
+CRFY+ SG L L
Sbjct: 461 DCRFYNVSGHCLQL 474
>AT5G24320.2 | Symbols: | WD-40 repeat family protein |
chr5:8284858-8287651 REVERSE
Length = 698
Score = 303 bits (775), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 139/254 (54%), Positives = 183/254 (72%), Gaps = 1/254 (0%)
Query: 1 ARAQMVRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQV 60
+R + V+V+ YKK KELSAL+ GQE+ AHEG+IL MKFSPDG+YLASAGEDG++RVW V
Sbjct: 221 SRIERVKVKEYKKEAKELSALFKGQEIQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSV 280
Query: 61 IESERSDEFGRLDIDPSHVYFTVNSHSEVVPLHADKEK-NSKFKDLRKNSHSACVILPQK 119
+E ER +E IDPS +YF V+ SE+ P+ +K+ RK + SACVI+P K
Sbjct: 281 VEDERCEEHDVPKIDPSCIYFEVSKLSELRPVAVEKDGITGSLMSPRKTTESACVIIPPK 340
Query: 120 IFQISEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVT 179
IF++ +KP+HEF GH G++LD+SWSKN +LS+S D +VRLWQ+GC CL +FSHNNYVT
Sbjct: 341 IFRVLDKPLHEFLGHSGDILDISWSKNNRLLSASVDNSVRLWQIGCEDCLGIFSHNNYVT 400
Query: 180 CVQFNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTG 239
VQFNP+ KVRIW+ CQV+DW D IVTAVCY+PDG+ +++G++T
Sbjct: 401 SVQFNPVDDDHFISGSIDGKVRIWSASQCQVVDWADARGIVTAVCYQPDGQAVIIGTLTS 460
Query: 240 NCRFYDASGMSLFL 253
+CRFY+ SG L L
Sbjct: 461 DCRFYNVSGHCLQL 474
>AT5G53500.1 | Symbols: | WD-40 repeat family protein |
chr5:21726167-21728524 REVERSE
Length = 654
Score = 292 bits (748), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 141/257 (54%), Positives = 188/257 (73%), Gaps = 11/257 (4%)
Query: 6 VRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIESER 65
V+V+ KK+ KELSALY Q++ AH+G+IL MKFS DG++LAS+GEDGIVRVW+V+E ++
Sbjct: 196 VKVKHCKKQAKELSALYQSQDIKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKVVEDKK 255
Query: 66 SDEFGRL------DIDPSHVYFTVNSHSEVVPLHADKEKNSKFKD-LRKNSHSACVILPQ 118
S RL +IDPS +YF VN S++ P+ ++EK K + RK S SACV+ P
Sbjct: 256 S----RLRRDCLNEIDPSCMYFEVNDLSQLKPVLVNEEKPKKTTESFRKTSDSACVVFPP 311
Query: 119 KIFQISEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYV 178
K+F+I EKP++EF GH GEVLD+SWSK+ Y+LS+S DKTVRLW+VG N CL VF+HN+YV
Sbjct: 312 KVFRIMEKPLYEFRGHTGEVLDISWSKDNYLLSASMDKTVRLWKVGSNDCLGVFAHNSYV 371
Query: 179 TCVQFNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMT 238
T VQFNP+ KVRIW I GC V+DW D+ +I++AVCYRPDG+G ++GS+
Sbjct: 372 TSVQFNPVNENYFMSGSIDGKVRIWNISGCSVVDWADLKDIISAVCYRPDGQGGIIGSLN 431
Query: 239 GNCRFYDASGMSLFLIS 255
G+CRF++ SG L L S
Sbjct: 432 GSCRFFNMSGEFLELDS 448
>AT5G42010.1 | Symbols: | WD-40 repeat family protein |
chr5:16802280-16804757 FORWARD
Length = 709
Score = 289 bits (740), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/265 (55%), Positives = 186/265 (70%), Gaps = 6/265 (2%)
Query: 2 RAQMVRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVI 61
R Q+ RV+S+KK+FKELS+L +GQE +AH+GSI+ MKFS DG+YLASAGED +VRVW +I
Sbjct: 228 RRQLTRVQSFKKQFKELSSLCVGQEFSAHDGSIVVMKFSHDGKYLASAGEDCVVRVWNII 287
Query: 62 ESERSD-EFGRLDIDPSHVYFTVNSHSEVVPLHADKEKNSKFKDL-RKNSHSACVILPQK 119
E ER D EF + D S VYF +N S++ PL + EK K + L RK S S C +LP K
Sbjct: 288 EDERRDNEFEVAESDSSCVYFGMNDKSQIEPLKTENEKIEKSRGLLRKKSESTCAVLPSK 347
Query: 120 IFQISEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGC-NRCLQVFSHNNYV 178
+F ISE P HEF GH GE+LDLSWS+ ++LSSS D+TVRLW+VG + C++VFSH ++V
Sbjct: 348 VFSISETPQHEFRGHTGEILDLSWSEKGFLLSSSVDETVRLWRVGSSDECIRVFSHKSFV 407
Query: 179 TCVQFNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMT 238
TCV FNP+ KVRIW + +V+D+ DI +IVTA+CYRPDGKG VVGSMT
Sbjct: 408 TCVAFNPVDDNYFISGSIDGKVRIWDVSQFRVVDYTDIRQIVTALCYRPDGKGAVVGSMT 467
Query: 239 GNCRFYDASGMSLFL---ISTHTIK 260
G CRFY + L L IS H K
Sbjct: 468 GECRFYHTTDNQLQLDRDISLHGKK 492
>AT5G54200.1 | Symbols: | WD-40 repeat family protein |
chr5:21993565-21997076 REVERSE
Length = 825
Score = 238 bits (606), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/246 (46%), Positives = 162/246 (65%), Gaps = 5/246 (2%)
Query: 4 QMVRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIES 63
+ V+VR Y K KEL+AL+ QE+ AH+GSI ++KFS DG+YLASAGED ++++W+V+ES
Sbjct: 336 ERVKVRQYGKSCKELTALFKSQEIQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVES 395
Query: 64 ERSDEFGRLDIDPS---HVYFTVNSHSEVVPLHADKEKNSKFKDLRKNSHSACVILPQKI 120
ER E +D +++ N E V + + + F RK+ V++P+ +
Sbjct: 396 ERKGELLSMDKQEDGSINLFLLANGSPEPVSMSPKRRGRTSFS--RKSVSLDNVLVPEAV 453
Query: 121 FQISEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVTC 180
F +SEKP+ F GH +VLDLSWSK++++LSSS DKTVRLW + CL+VFSH++YVTC
Sbjct: 454 FGLSEKPVCSFVGHLDDVLDLSWSKSQHLLSSSMDKTVRLWDLSSKTCLKVFSHSDYVTC 513
Query: 181 VQFNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTGN 240
+QFNP+ KVRIW+IP QV+DW D+ E+VTA CY PDG+G +VGS G
Sbjct: 514 IQFNPVDDNYFISGSLDAKVRIWSIPDHQVVDWNDLHEMVTAACYTPDGQGALVGSYKGT 573
Query: 241 CRFYDA 246
C Y+
Sbjct: 574 CCLYNT 579
>AT3G15470.1 | Symbols: | WD-40 repeat family protein |
chr3:5216630-5219868 REVERSE
Length = 883
Score = 231 bits (588), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 156/248 (62%), Gaps = 4/248 (1%)
Query: 4 QMVRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIES 63
+ VRVR Y K KEL+ALY QE+ AH GSI ++KFS DG+YLASAGED I+ +WQV+E+
Sbjct: 386 ERVRVRQYGKSSKELTALYKTQEIQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEA 445
Query: 64 ERSDEFGRLDIDPSHVYFTVNSHSEVVPLHADKEKNSKFKDLRKNSHSACVILPQKIFQI 123
E+ E + N E P + + RK+ + +P +F +
Sbjct: 446 EKKGELLLDRP--ELLLLATNGSPE--PTTMSPRRRGRTSISRKSLSLENIFVPDSLFGL 501
Query: 124 SEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVTCVQF 183
SEKP F GH +VLDL+WSK++++LSSS DKTVRLW + CL+VFSH++YVTC+QF
Sbjct: 502 SEKPFCSFQGHVDDVLDLAWSKSQHLLSSSMDKTVRLWNLSSQTCLKVFSHSDYVTCIQF 561
Query: 184 NPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTGNCRF 243
NP+ KVR+W+IP QV+DW D+ E+VT+ CY PDG+G++VGS G+CR
Sbjct: 562 NPVDDRYFISGSLDAKVRVWSIPDRQVVDWYDLHEMVTSACYTPDGQGVLVGSYKGSCRM 621
Query: 244 YDASGMSL 251
Y AS L
Sbjct: 622 YSASDNKL 629
>AT1G48870.1 | Symbols: | WD-40 repeat family protein |
chr1:18072325-18074457 REVERSE
Length = 593
Score = 215 bits (548), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 143/239 (59%), Gaps = 30/239 (12%)
Query: 6 VRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIESER 65
V+V++ KK ELSA YM Q++ H+G I T+KFSPDG+YLA+ GEDG+V++W++ S+
Sbjct: 173 VKVKTNKKSHVELSAAYMVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSD- 231
Query: 66 SDEFGRLDIDPSHVYFTVNSHSEVVPLHADKEKNSKFKDLRKNSHSACVILPQKIFQISE 125
S + +E N +A V+ PQK F I E
Sbjct: 232 ---------------------SLLASFLRQQEP--------INQQAALVLFPQKAFHIEE 262
Query: 126 KPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVTCVQFNP 185
P E YGH G+VLDL+WS + +LS+S DKTVRLW+ GC++CL VF HNNYVTCV+FNP
Sbjct: 263 TPFQELYGHTGDVLDLAWSDSNLLLSASKDKTVRLWRTGCDQCLHVFHHNNYVTCVEFNP 322
Query: 186 MXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTGNCRFY 244
+ K RIW + +V+ W D+ + ++A+ Y+P+G G VVG +TGNCRFY
Sbjct: 323 VNKNNFASGSIDGKARIWGLSEERVVAWTDVRDSISAISYQPNGNGFVVGCITGNCRFY 381
>AT5G02430.1 | Symbols: | WD-40 repeat family protein |
chr5:526592-529839 FORWARD
Length = 905
Score = 200 bits (509), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 118/252 (46%), Positives = 154/252 (61%), Gaps = 4/252 (1%)
Query: 4 QMVRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIES 63
Q V+VR K K+LSAL+M QE+ AH+G I TMKFSPD LASAGED + VW+V E
Sbjct: 384 QWVKVRHSGKSHKDLSALHMCQEIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQEC 443
Query: 64 E--RSDEFGRLDIDPSHVYFT-VNSHSEVVPLHADKEKNSKFKDLRK-NSHSACVILPQK 119
E +E I PS T +S + + DK+K K +K N V P+
Sbjct: 444 EIMSMNEGSLTPIHPSMSGSTDKSSEGDAAEVSQDKKKKGKTSMSKKGNQIPDYVHAPET 503
Query: 120 IFQISEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVT 179
+F +S+KPI F GH +VLDLSWS+++ +LSSS DKTVRLW + CL++F+HN+YVT
Sbjct: 504 VFSLSDKPICSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLFAHNDYVT 563
Query: 180 CVQFNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTG 239
CVQFNP+ K+RIW I QV++W D+ E+VTAVCY PDG+ VGS+ G
Sbjct: 564 CVQFNPLDEDYFISGSLDAKIRIWNISNRQVVEWNDLKEMVTAVCYTPDGQAAFVGSING 623
Query: 240 NCRFYDASGMSL 251
+CR Y A L
Sbjct: 624 HCRLYSAEDCKL 635
>AT2G37670.1 | Symbols: | WD-40 repeat family protein |
chr2:15797384-15800536 REVERSE
Length = 903
Score = 182 bits (461), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/247 (42%), Positives = 152/247 (61%), Gaps = 4/247 (1%)
Query: 6 VRVRSYKKRFKELSALYMGQEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIESER 65
V+VR K +KELSAL+M QE+ AHEG++ T+KFS D YLAS G D ++ VW+V E E
Sbjct: 379 VKVRPTGKSYKELSALHMCQEIQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECEL 438
Query: 66 SDEFGRLDIDPSHVYFTVNSHSEVVPLHADKEKNSKFKDLRKNSH-SACVILPQKIFQIS 124
+ P H +S +E+ + +K+K K R+++H V +P+ +F S
Sbjct: 439 M-SMNEGSLTPIHPSLCDSSGNEITVV--EKKKKGKGSSGRRHNHIPDYVHVPETVFSFS 495
Query: 125 EKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVTCVQFN 184
+KP+ GH +LDLSWSK++ +LSSS DKTVRLW + CL++F+HN+YVTC+QF+
Sbjct: 496 DKPVCSLKGHLDAILDLSWSKSQLLLSSSMDKTVRLWDIETKTCLKLFAHNDYVTCIQFS 555
Query: 185 PMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTGNCRFY 244
P+ K+RIW+I V++W D+ E+VTA CY PDG+G ++GS G CR Y
Sbjct: 556 PVDENYFLSGSLDAKIRIWSIQDRHVVEWSDLHEMVTAACYTPDGQGALIGSHKGICRAY 615
Query: 245 DASGMSL 251
D L
Sbjct: 616 DTEDCKL 622
>AT4G02730.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr4:1207759-1209066 FORWARD
Length = 333
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 128 IHEFYGHRGEVLDLSWSKNK-YILSSSTDKTVRLWQV-GCNRCLQVF-SHNNYVTCVQFN 184
IH + GH + DL+WS + Y S+S D T+R+W CL+V H N+V CV FN
Sbjct: 78 IHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFN 137
Query: 185 PMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEI-VTAVCYRPDGKGLVVGSMTGNCRF 243
P +RIW + + + I + +++V + DG +V S G+C+
Sbjct: 138 P-PSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKI 196
Query: 244 YDA 246
+DA
Sbjct: 197 WDA 199
>AT3G49660.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:18413690-18415223 FORWARD
Length = 317
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 30/232 (12%)
Query: 25 QEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIE-----SERSDEFGRLDIDPSHV 79
Q + +H ++ ++KFS DG+ LASA D +R + + +E EF + S V
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 80 YFTVNSHSEVVPLHADKEKNSKFKDLRKNSHSACVILPQKIFQISEKPIHEFYGHRGEVL 139
F+ ++ V A +K K D+ S I GH
Sbjct: 78 AFSSDARFIV---SASDDKTLKLWDVETGSL-----------------IKTLIGHTNYAF 117
Query: 140 DLSWS-KNKYILSSSTDKTVRLWQVGCNRCLQVF-SHNNYVTCVQFNPMXXXXXXXXXXX 197
++++ ++ I+S S D+TVR+W V +CL+V +H++ VT V FN
Sbjct: 118 CVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFN-RDGSLIVSSSYD 176
Query: 198 XKVRIWTIPGCQVIDWI--DITEIVTAVCYRPDGKGLVVGSMTGNCRFYDAS 247
RIW + + D V+ V + P+GK ++VG++ R ++ S
Sbjct: 177 GLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNIS 228
>AT2G40360.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:16853123-16856635 REVERSE
Length = 753
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 130 EFYGHRGEVLDLSW-SKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVTCVQFNPM 186
E+ GH G V +S S ++I S STD +VR+W+V RCL+V+ + + CV +NP+
Sbjct: 418 EYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDEAIMCVAWNPL 475
>AT1G18080.1 | Symbols: ATARCA, RACK1A_AT | ATARCA; nucleotide
binding | chr1:6222325-6223901 FORWARD
Length = 327
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 131 FYGHRGEVLDLSWS-KNKYILSSSTDKTVRLWQVGCNRCLQVFS-----HNNYVTCVQFN 184
F GH +VL +++S N+ I+S+S D+T++LW C S H ++V+CV+F+
Sbjct: 101 FVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT-LGECKYTISEGGEGHRDWVSCVRFS 159
Query: 185 PMXXXXXXXXXXXXK-VRIWTIPGCQVIDWI-DITEIVTAVCYRPDGKGLVVGSMTGNCR 242
P K V++W + C++ + T V+ V PDG G G
Sbjct: 160 PNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVL 219
Query: 243 FYD-ASGMSLFLISTHTI 259
+D A G L+ + +++
Sbjct: 220 LWDLAEGKKLYSLEANSV 237
>AT2G33340.2 | Symbols: | nucleotide binding / ubiquitin-protein
ligase | chr2:14126584-14131000 REVERSE
Length = 525
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 100/255 (39%), Gaps = 36/255 (14%)
Query: 27 VAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQ----------VIESERSDEFGRLDIDP 76
+ H + ++KF D + +A D VR+W+ ++ S E + + P
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHP 319
Query: 77 SHVYFTVNS-----------HSEVVPLHADKEKNSKFKDLRKNSHSACVIL----PQKIF 121
++ YF S + +D KN + H +IL Q +
Sbjct: 320 TNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYT--AAAFHPDGLILGTGTSQSVV 377
Query: 122 QI----SEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNY 177
+I S+ + +F GH GEV +S+S+N Y L+++ + VRLW + R + F +
Sbjct: 378 KIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRLWDLRKLRNFKSFLSAD- 436
Query: 178 VTCVQFNPMXXXXXXXXXXXXKVRIWTIPG----CQVIDWIDITEIVTAVCYRPDGKGLV 233
V+F+P + ++ + + + T T V + D + +
Sbjct: 437 ANSVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIKTLPDLSGTGKATCVKFGSDAQYVA 496
Query: 234 VGSMTGNCRFYDASG 248
VGSM N R + G
Sbjct: 497 VGSMDRNLRIFGLPG 511
>AT2G33340.1 | Symbols: | nucleotide binding / ubiquitin-protein
ligase | chr2:14126584-14131000 REVERSE
Length = 525
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 100/255 (39%), Gaps = 36/255 (14%)
Query: 27 VAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQ----------VIESERSDEFGRLDIDP 76
+ H + ++KF D + +A D VR+W+ ++ S E + + P
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHP 319
Query: 77 SHVYFTVNS-----------HSEVVPLHADKEKNSKFKDLRKNSHSACVIL----PQKIF 121
++ YF S + +D KN + H +IL Q +
Sbjct: 320 TNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYT--AAAFHPDGLILGTGTSQSVV 377
Query: 122 QI----SEKPIHEFYGHRGEVLDLSWSKNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNY 177
+I S+ + +F GH GEV +S+S+N Y L+++ + VRLW + R + F +
Sbjct: 378 KIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVRLWDLRKLRNFKSFLSAD- 436
Query: 178 VTCVQFNPMXXXXXXXXXXXXKVRIWTIPG----CQVIDWIDITEIVTAVCYRPDGKGLV 233
V+F+P + ++ + + + T T V + D + +
Sbjct: 437 ANSVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIKTLPDLSGTGKATCVKFGSDAQYVA 496
Query: 234 VGSMTGNCRFYDASG 248
VGSM N R + G
Sbjct: 497 VGSMDRNLRIFGLPG 511
>AT5G52820.1 | Symbols: | WD-40 repeat family protein / notchless
protein, putative | chr5:21401423-21404203 FORWARD
Length = 473
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 26/167 (15%)
Query: 25 QEVAAHEGSILTMKFSPDGQYLASAGEDGIVRVWQVIESERSDEFGRLDIDPSHVYFTVN 84
Q +A H ++L + FSPDG+ LAS D VR+W D+ FT
Sbjct: 103 QTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLW--------------DLYTETPLFTCK 148
Query: 85 SHSEVVPLHADKEKNSKFKDLRKNSHSACVILPQKIFQISEKPIHEFYGHRGEVLDLSW- 143
H V L + K S C P+K ++ P+ GH+ + +SW
Sbjct: 149 GHKNWV-LTVAWSPDGKHLVSGSKSGEICCWNPKK-GELEGSPL---TGHKKWITGISWE 203
Query: 144 -----SKNKYILSSSTDKTVRLWQVGCNRCLQVFS-HNNYVTCVQFN 184
S + ++SS D R+W + + + S H VTCV++
Sbjct: 204 PVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWG 250
>AT3G18130.1 | Symbols: RACK1C_AT | RACK1C_AT (RECEPTOR FOR
ACTIVATED C KINASE 1 C); nucleotide binding |
chr3:6211109-6212371 REVERSE
Length = 326
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 131 FYGHRGEVLDLSWS-KNKYILSSSTDKTVRLWQVGCNRCLQVFS----HNNYVTCVQFNP 185
F GH +VL +++S N+ I+S+S D+T++LW C S H +V+CV+F+P
Sbjct: 101 FVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNT-LGECKYTISEGDGHKEWVSCVRFSP 159
Query: 186 MXXXXXXXXXXXXK-VRIWTIPGCQVID-WIDITEIVTAVCYRPDGKGLVVGSMTGNCRF 243
K V++W + C++ + + + + V PDG G G
Sbjct: 160 NTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILL 219
Query: 244 YD-ASGMSLFLISTHTI 259
+D A G L+ + +I
Sbjct: 220 WDLAEGKKLYSLEAGSI 236
>AT1G48630.1 | Symbols: RACK1B_AT | RACK1B_AT (RECEPTOR FOR
ACTIVATED C KINASE 1 B); nucleotide binding |
chr1:17981977-17983268 REVERSE
Length = 326
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 126 KPIHEFYGHRGEVLDLSWS-KNKYILSSSTDKTVRLWQVGCNRCLQVFS----HNNYVTC 180
+ F GH +VL +++S N+ I+S+S D+T++LW C S H +V+C
Sbjct: 96 ESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNT-LGECKYTISEADGHKEWVSC 154
Query: 181 VQFNPMXXXXXXXXXXXXK-VRIWTIPGCQVIDWI-DITEIVTAVCYRPDGKGLVVGSMT 238
V+F+P K V++W + C++ + + + + V PDG G
Sbjct: 155 VRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKD 214
Query: 239 GNCRFYD-ASGMSLFLISTHTI 259
G +D A G L+ + +I
Sbjct: 215 GVILLWDLAEGKKLYSLEAGSI 236
>AT2G16405.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr2:7105915-7108787 REVERSE
Length = 482
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 125 EKP--IHEFYGHRGEVLDLSWS-KNKYILSSSTDKTVRLWQVGCNRCLQVFSHNNYVTCV 181
E+P + + GH +V D +S N+YI SSS DKT+R+W++ C++V + C+
Sbjct: 204 EEPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYGISPQYCI 263
Query: 182 QFNPMXXXXXXXXXXXXKVRIWTIPGCQVIDWIDITEIVTAVCYRPDGKGLVVGSMTG 239
+F+P+ ++ ++ ++I + + VT++ + G+ + G G
Sbjct: 264 RFHPVNNNFLSAGNANKELTVFNFSTGRIIKKLLFEDEVTSMDHDHTGQIIFCGDGQG 321