Jatropha Genome Database
- JcCB0573121.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0573121.10 + phase: 0 /partial
(129 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G47620.1 | Symbols: AtTCP14 | AtTCP14 (TEOSINTE BRANCHED1, CY... 57 3e-09
AT2G45680.1 | Symbols: | TCP family transcription factor, putat... 54 3e-08
AT3G27010.1 | Symbols: AT-TCP20, PCF1, TCP20 | AT-TCP20; transcr... 51 2e-07
AT1G69690.1 | Symbols: | TCP family transcription factor, putat... 51 2e-07
AT1G72010.1 | Symbols: | TCP family transcription factor, putat... 50 4e-07
AT1G58100.1 | Symbols: | TCP family transcription factor, putat... 49 1e-06
AT1G35560.1 | Symbols: | TCP family transcription factor, putat... 48 2e-06
AT3G45150.1 | Symbols: TCP16 | TCP16 (TCP domain protein 16); tr... 47 4e-06
AT5G23280.1 | Symbols: | TCP family transcription factor, putat... 47 4e-06
AT5G41030.1 | Symbols: | TCP family transcription factor, putat... 47 4e-06
AT5G08330.1 | Symbols: | TCP family transcription factor, putat... 47 5e-06
AT5G51910.2 | Symbols: | TCP family transcription factor, putat... 45 9e-06
AT5G51910.1 | Symbols: | TCP family transcription factor, putat... 45 9e-06
>AT3G47620.1 | Symbols: AtTCP14 | AtTCP14 (TEOSINTE BRANCHED1,
CYCLOIDEA and PCF (TCP) 14); transcription factor |
chr3:17559004-17560473 FORWARD
Length = 489
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 6 LQPSSENAQSDAKRGKPTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDG 62
LQ E+A AK+ P +R T D H ++ +R+R+PA+C +F L +E G +SDG
Sbjct: 96 LQTQEESAVVAAKK-PPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDG 154
Query: 63 DIIHWLIHELRPELLPA 79
+ I WL+ + P ++ A
Sbjct: 155 ETIEWLLQQAEPSVIAA 171
>AT2G45680.1 | Symbols: | TCP family transcription factor, putative
| chr2:18820717-18821787 REVERSE
Length = 356
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 17 AKRGKPTRRRFTGDAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELR 73
+ G P +R T D H + +R+R+PA C IF L +E G +SDG+ I WL+
Sbjct: 64 SSTGPPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLENAE 123
Query: 74 PELLPA 79
P ++ A
Sbjct: 124 PAIIAA 129
>AT3G27010.1 | Symbols: AT-TCP20, PCF1, TCP20 | AT-TCP20;
transcription factor | chr3:9957810-9958754 REVERSE
Length = 314
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 24 RRRFTGDAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
+R D H + +R+R+PA+C IF L +E G +SDG+ I WL+ + P ++ A
Sbjct: 74 KRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAA 132
>AT1G69690.1 | Symbols: | TCP family transcription factor, putative
| chr1:26216449-26217426 FORWARD
Length = 325
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 22 PTRRRFTGDAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLP 78
P +R T D H + +R+R+PA+C +F L +E G +SDG+ I WL+ + P ++
Sbjct: 46 PPKRTSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIA 105
Query: 79 A 79
A
Sbjct: 106 A 106
>AT1G72010.1 | Symbols: | TCP family transcription factor, putative
| chr1:27107844-27108971 FORWARD
Length = 375
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 8/60 (13%)
Query: 21 KPTRRRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELL 77
KPT+ D H ++ +R+R+PA+C +F L +E G +SDG+ I WL+ + P ++
Sbjct: 61 KPTK-----DRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAII 115
>AT1G58100.1 | Symbols: | TCP family transcription factor, putative
| chr1:21512680-21513885 REVERSE
Length = 401
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 25 RRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
+R T D H ++ +R+R+PA+C +F L +E G +SDG+ I WL+ + P ++ A
Sbjct: 57 KRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAA 114
>AT1G35560.1 | Symbols: | TCP family transcription factor, putative
| chr1:13116099-13117124 REVERSE
Length = 341
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 25 RRFTGDAHVPIN---KRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
+R + D H+ ++ +R+R+PAIC +F L +E +SDG+ I WL+ + P ++ A
Sbjct: 52 KRPSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLQQAEPAIIAA 109
>AT3G45150.1 | Symbols: TCP16 | TCP16 (TCP domain protein 16);
transcription factor | chr3:16531179-16531676 FORWARD
Length = 165
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 25 RRFTGDAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
RR D H+ I ++R+R+P P +F L KE G ++DG+ + WL+ P + A
Sbjct: 14 RRTPKDRHLKIGGRDRRIRIPPSVAPQLFRLTKELGFKTDGETVSWLLQNAEPAIFAA 71
>AT5G23280.1 | Symbols: | TCP family transcription factor,
putative | chr5:7843017-7843769 FORWARD
Length = 250
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 36 NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
+R+R+P IC +F L +E G +SDG I WL+ + P ++ A
Sbjct: 50 GRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA 93
>AT5G41030.1 | Symbols: | TCP family transcription factor, putative
| chr5:16428706-16429437 FORWARD
Length = 243
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 30 DAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
D H+ + +RVR+P +C I+ L KE G +SDG+ + WL+ P +L A
Sbjct: 70 DRHLKVEGRGRRVRLPPLCAARIYQLTKELGHKSDGETLEWLLQHAEPSILSA 122
>AT5G08330.1 | Symbols: | TCP family transcription factor,
putative | chr5:2680828-2681547 FORWARD
Length = 239
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 36 NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRPELLPA 79
+R+R+P IC +F L +E G +SDG I WL+ + P ++ A
Sbjct: 42 GRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAA 85
>AT5G51910.2 | Symbols: | TCP family transcription factor, putative
| chr5:21094704-21095585 REVERSE
Length = 293
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 19 RGKPTRRRFTG-DAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRP 74
+ KP +R T D H + +R+R+PA C +F L +E G +SDG+ I WL+ P
Sbjct: 47 KTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEP 106
Query: 75 ELLPA 79
++ A
Sbjct: 107 AIIEA 111
>AT5G51910.1 | Symbols: | TCP family transcription factor, putative
| chr5:21094704-21095585 REVERSE
Length = 293
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 19 RGKPTRRRFTG-DAHVPI---NKRVRVPAICVPAIFHLKKERGLRSDGDIIHWLIHELRP 74
+ KP +R T D H + +R+R+PA C +F L +E G +SDG+ I WL+ P
Sbjct: 47 KTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEP 106
Query: 75 ELLPA 79
++ A
Sbjct: 107 AIIEA 111