Jatropha Genome Database

JcCB0551271.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0551271.10 - phase: 0 /partial
         (209 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G12780.1 | Symbols: PGK1 | PGK1 (PHOSPHOGLYCERATE KINASE 1); ...   116   1e-26
AT1G56190.2 | Symbols:  | phosphoglycerate kinase, putative | ch...   115   3e-26
AT1G56190.1 | Symbols:  | phosphoglycerate kinase, putative | ch...   114   3e-26
AT1G79550.2 | Symbols: PGK | PGK (PHOSPHOGLYCERATE KINASE); phos...   103   9e-23
AT1G79550.1 | Symbols: PGK | PGK (PHOSPHOGLYCERATE KINASE); phos...   103   9e-23

>AT3G12780.1 | Symbols: PGK1 | PGK1 (PHOSPHOGLYCERATE KINASE 1);
           phosphoglycerate kinase | chr3:4061127-4063140 REVERSE
          Length = 481

 Score =  116 bits (290), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 96/176 (54%), Gaps = 1/176 (0%)

Query: 24  NCSKFAELLSSGVDIFVNDSFSLSHKILASTVAITRFCSACVAGFHFEESLYQMKNAVKM 83
           N  +FA+ L+S  D++VND+F  +H+  AST  +T+F    VAGF  ++ L  +  AV  
Sbjct: 205 NDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSN 264

Query: 84  NKRPYIAIIGGGNLYDKAASLHLLASKCDGLVFVGIMSFQIMHALGYSVPSSLIEPQAHK 143
            KRP+ AI+GG  +  K   +  L  KCD L+  G M F    A G SV SSL+E    +
Sbjct: 265 PKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLE 324

Query: 144 AALDIIHFAQDRNIPILCPKDFWCVQGFAPK-QMEVFPAHDILKGWSPVDLGPKSL 198
            A +++  A+ + + +L P D      FAP    ++ PA  I  GW  +D+GP S+
Sbjct: 325 LATELLAKAKAKGVSLLLPTDVVVADKFAPDANSKIVPASGIEDGWMGLDIGPDSI 380


>AT1G56190.2 | Symbols:  | phosphoglycerate kinase, putative |
           chr1:21028622-21030454 FORWARD
          Length = 405

 Score =  115 bits (287), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 94/176 (53%), Gaps = 1/176 (0%)

Query: 24  NCSKFAELLSSGVDIFVNDSFSLSHKILASTVAITRFCSACVAGFHFEESLYQMKNAVKM 83
           N   FA+ L+S  D++VND+F  +H+  AST  +T+F    VAGF  ++ L  +  AV  
Sbjct: 129 NEPDFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSN 188

Query: 84  NKRPYIAIIGGGNLYDKAASLHLLASKCDGLVFVGIMSFQIMHALGYSVPSSLIEPQAHK 143
            KRP+ AI+GG  +  K   +  L  KCD L+  G M F    A G SV SSL+E    +
Sbjct: 189 PKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLE 248

Query: 144 AALDIIHFAQDRNIPILCPKDFWCVQGFAPK-QMEVFPAHDILKGWSPVDLGPKSL 198
            A  ++  A+ R + +L P D      FAP    ++ PA  I  GW  +D+GP S+
Sbjct: 249 LATTLLAKAKARGVSLLLPTDVVIADKFAPDANSKIVPASAIPDGWMGLDIGPDSV 304


>AT1G56190.1 | Symbols:  | phosphoglycerate kinase, putative |
           chr1:21028403-21030454 FORWARD
          Length = 478

 Score =  114 bits (286), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 65/176 (36%), Positives = 94/176 (53%), Gaps = 1/176 (0%)

Query: 24  NCSKFAELLSSGVDIFVNDSFSLSHKILASTVAITRFCSACVAGFHFEESLYQMKNAVKM 83
           N   FA+ L+S  D++VND+F  +H+  AST  +T+F    VAGF  ++ L  +  AV  
Sbjct: 202 NEPDFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSN 261

Query: 84  NKRPYIAIIGGGNLYDKAASLHLLASKCDGLVFVGIMSFQIMHALGYSVPSSLIEPQAHK 143
            KRP+ AI+GG  +  K   +  L  KCD L+  G M F    A G SV SSL+E    +
Sbjct: 262 PKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLE 321

Query: 144 AALDIIHFAQDRNIPILCPKDFWCVQGFAPK-QMEVFPAHDILKGWSPVDLGPKSL 198
            A  ++  A+ R + +L P D      FAP    ++ PA  I  GW  +D+GP S+
Sbjct: 322 LATTLLAKAKARGVSLLLPTDVVIADKFAPDANSKIVPASAIPDGWMGLDIGPDSV 377


>AT1G79550.2 | Symbols: PGK | PGK (PHOSPHOGLYCERATE KINASE);
           phosphoglycerate kinase | chr1:29924347-29926295 REVERSE
          Length = 401

 Score =  103 bits (256), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 1/176 (0%)

Query: 24  NCSKFAELLSSGVDIFVNDSFSLSHKILASTVAITRFCSACVAGFHFEESLYQMKNAVKM 83
           N  +FA+ L++  D++VND+F  +H+  AST  + +F    VAGF  ++ L  +  AV  
Sbjct: 130 NDPEFAKKLAALADVYVNDAFGTAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVAN 189

Query: 84  NKRPYIAIIGGGNLYDKAASLHLLASKCDGLVFVGIMSFQIMHALGYSVPSSLIEPQAHK 143
            K+P+ AI+GG  +  K   +  L +  D L+  G M F    A G SV SSL+E     
Sbjct: 190 PKKPFAAIVGGSKVSTKIGVIESLLNTVDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLD 249

Query: 144 AALDIIHFAQDRNIPILCPKDFWCVQGFAPK-QMEVFPAHDILKGWSPVDLGPKSL 198
            A  ++  A+ + + +L P D      FAP    ++ PA  I  GW  +D+GP S+
Sbjct: 250 LAKSLMEKAKAKGVSLLLPTDVVIADKFAPDANSKIVPATAIPDGWMGLDIGPDSI 305


>AT1G79550.1 | Symbols: PGK | PGK (PHOSPHOGLYCERATE KINASE);
           phosphoglycerate kinase | chr1:29924347-29926295 REVERSE
          Length = 401

 Score =  103 bits (256), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 1/176 (0%)

Query: 24  NCSKFAELLSSGVDIFVNDSFSLSHKILASTVAITRFCSACVAGFHFEESLYQMKNAVKM 83
           N  +FA+ L++  D++VND+F  +H+  AST  + +F    VAGF  ++ L  +  AV  
Sbjct: 130 NDPEFAKKLAALADVYVNDAFGTAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVAN 189

Query: 84  NKRPYIAIIGGGNLYDKAASLHLLASKCDGLVFVGIMSFQIMHALGYSVPSSLIEPQAHK 143
            K+P+ AI+GG  +  K   +  L +  D L+  G M F    A G SV SSL+E     
Sbjct: 190 PKKPFAAIVGGSKVSTKIGVIESLLNTVDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLD 249

Query: 144 AALDIIHFAQDRNIPILCPKDFWCVQGFAPK-QMEVFPAHDILKGWSPVDLGPKSL 198
            A  ++  A+ + + +L P D      FAP    ++ PA  I  GW  +D+GP S+
Sbjct: 250 LAKSLMEKAKAKGVSLLLPTDVVIADKFAPDANSKIVPATAIPDGWMGLDIGPDSI 305