Jatropha Genome Database
- JcCB0551261.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0551261.10 - phase: 0
(332 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G17570.1 | Symbols: | undecaprenyl pyrophosphate synthetase ... 290 8e-79
AT5G60510.1 | Symbols: | undecaprenyl pyrophosphate synthetase ... 229 1e-60
AT5G60500.1 | Symbols: | undecaprenyl pyrophosphate synthetase ... 219 2e-57
AT2G23410.1 | Symbols: ACPT | ACPT (Arabidopsis cis-prenyltransf... 113 2e-25
AT5G58770.1 | Symbols: | dehydrodolichyl diphosphate synthase, ... 108 4e-24
AT2G23400.1 | Symbols: | dehydrodolichyl diphosphate synthase, ... 107 1e-23
AT5G58784.1 | Symbols: | dehydrodolichyl diphosphate synthase |... 107 1e-23
AT5G58780.1 | Symbols: | dehydrodolichyl diphosphate synthase, ... 106 2e-23
AT5G58782.1 | Symbols: | dehydrodolichyl diphosphate synthase, ... 101 7e-22
>AT2G17570.1 | Symbols: | undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein |
chr2:7645086-7645973 FORWARD
Length = 295
Score = 290 bits (742), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 149/279 (53%), Positives = 198/279 (70%), Gaps = 12/279 (4%)
Query: 12 RVAELFGNLGGLLRICLFQIVSMGPIPSHFAFIMDGNRRYAKKGNLKLGAGHQAGFESLI 71
R+++L + G R LF+++SMGPIP H AFIMDGNRRYAKK L G+GH+AGF +L+
Sbjct: 14 RMSQLLEQIYGFSRRSLFRVISMGPIPCHIAFIMDGNRRYAKKCGLLDGSGHKAGFSALM 73
Query: 72 SILMYCYELGVKYVTIYAFSIDNFKRRPDEVKDLMDLMLEKIDEMLKEESMAKQYGIRVY 131
S+L YCYELG+KYVTIYAFSIDNF+R+P+EV+ +MDLMLEKI +L++ES+ QYGIRVY
Sbjct: 74 SMLQYCYELGIKYVTIYAFSIDNFRRKPEEVESVMDLMLEKIKSLLEKESIVHQYGIRVY 133
Query: 132 FKDEV----DESQATA-----ASANCSGLIREVGGVDTENSMVMHAVHTSYEDQA--VMA 180
F + D+ +A A A+A S ++ + ++ AV S +++ + A
Sbjct: 134 FIGNLALLNDQVRAAAEKVMKATAKNSRVVLLICIAYNSTDEIVQAVKKSCINKSDNIEA 193
Query: 181 NRTGHGVAPIE-ESEKMQGECSMIKLVDIEKYMYMAVAPEPDILVRSSGETRLSNFLLWQ 239
+ H + + E M+ + I+LVDIE+ M M+VAP PDIL+RSSGETRLSNFLLWQ
Sbjct: 194 SNYKHEDSDSDIEGTDMENQEKKIQLVDIEENMQMSVAPNPDILIRSSGETRLSNFLLWQ 253
Query: 240 SSNCLLYSPDALWPEIGLWHLVWAILDFQRNHSYLEKKR 278
+ N L SP ALWPEIGL HL+WAIL+FQRNHSYLEK++
Sbjct: 254 TGNTQLCSPAALWPEIGLRHLLWAILNFQRNHSYLEKRK 292
>AT5G60510.1 | Symbols: | undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein |
chr5:24330721-24331539 FORWARD
Length = 272
Score = 229 bits (585), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/282 (43%), Positives = 173/282 (61%), Gaps = 21/282 (7%)
Query: 4 NEMTKSSSRVAELFGNLGGLLRICLFQIVSMGPIPSHFAFIMDGNRRYAKKGNLK-LGAG 62
N + ++F L L+R +F+++ +GPIP++ +FIMDGNRR+AKK NL+ L AG
Sbjct: 2 NNTREEVGEFTQIFNALMSLMRKFIFKVLRVGPIPTNISFIMDGNRRFAKKRNLEGLDAG 61
Query: 63 HQAGFESLISILMYCYELGVKYVTIYAFSIDNFKRRPDEVKDLMDLMLEKIDEMLKEESM 122
H+AGF S+ IL YC E+GV YVT+YAF +DNFKR P+EVK +MDLMLEK++ + +
Sbjct: 62 HRAGFISVKYILQYCKEIGVPYVTLYAFGMDNFKRGPEEVKCVMDLMLEKVELTIDQAVS 121
Query: 123 AKQYGIRVYFKDEVD--ESQATAASANCSGLIRE----VGGVDTENSMVMHAVHTSYEDQ 176
G+R+ F +++ + AA+ L E + V S + VH + D
Sbjct: 122 GNMNGVRIIFAGDLNSLNERFRAATKKLMELTEENRDLIVVVCVAYSTSVEIVH-AVRDS 180
Query: 177 AVMANRTGHGVAPIEESEKMQGECSMIKLVDIEKYMYMAVAPEPDILVRSSGETRLSNFL 236
V ++TG G + +E L DIE+ MY +V P PD++VR+ G RLSNF+
Sbjct: 181 CVRKSKTGDGSSALE-------------LSDIEECMYTSVVPVPDLVVRTGGGDRLSNFM 227
Query: 237 LWQSSNCLLYSPDALWPEIGLWHLVWAILDFQRNHSYLEKKR 278
WQ+S LL+ +ALWPE+GLWHLVWAIL FQR YL+KK+
Sbjct: 228 TWQTSRALLHRTEALWPELGLWHLVWAILKFQRMQDYLQKKK 269
>AT5G60500.1 | Symbols: | undecaprenyl pyrophosphate synthetase
family protein / UPP synthetase family protein |
chr5:24328815-24329630 FORWARD
Length = 271
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 167/267 (62%), Gaps = 11/267 (4%)
Query: 14 AELFGNLGGLLRICLFQIVSMGPIPSHFAFIMDGNRRYAKKGNL-KLGAGHQAGFESLIS 72
+F L L+R LF+++ +GPIP++ +FIMDGNRR+AKK NL L AGH+AGF S+
Sbjct: 11 THIFNALMSLMRKFLFRVLCVGPIPTNISFIMDGNRRFAKKHNLIGLDAGHRAGFISVKY 70
Query: 73 ILMYCYELGVKYVTIYAFSIDNFKRRPDEVKDLMDLMLEKIDEMLKEESMAKQYGIRVYF 132
IL YC E+GV YVT++AF +DNFKR P+EVK +MDLMLEK++ + + G+R+ F
Sbjct: 71 ILQYCKEIGVPYVTLHAFGMDNFKRGPEEVKCVMDLMLEKVELAIDQAVSGNMNGVRIIF 130
Query: 133 KDEVDESQATAASANCSGLIREVGGVDTENSMVMHAVHTSYEDQAVMANRTGHGVAPIEE 192
++D +A +++ + EN ++ V +Y + H V
Sbjct: 131 AGDLDSLNEHFRAAT-----KKLMELTEENRDLIVVVCVAYSTSLEIV----HAVRKSCV 181
Query: 193 SEKMQGE-CSMIKLVDIEKYMYMAVAPEPDILVRSSGETRLSNFLLWQSSNCLLYSPDAL 251
+ G+ +++L D+E+ MY ++ P PD+++R+ G RLSNF+ WQ+S LL+ +AL
Sbjct: 182 RKCTNGDDLVLLELSDVEECMYTSIVPVPDLVIRTGGGDRLSNFMTWQTSRSLLHRTEAL 241
Query: 252 WPEIGLWHLVWAILDFQRNHSYLEKKR 278
WPE+GLWHLVWAIL FQR YL KK+
Sbjct: 242 WPELGLWHLVWAILKFQRMQDYLTKKK 268
>AT2G23410.1 | Symbols: ACPT | ACPT (Arabidopsis
cis-prenyltransferase); dehydrodolichyl diphosphate
synthase | chr2:9966247-9967741 REVERSE
Length = 303
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 124/240 (51%), Gaps = 22/240 (9%)
Query: 37 IPSHFAFIMDGNRRYAKKGNLKLGAGHQAGFESLISILMYCYELGVKYVTIYAFSIDNFK 96
+P H AFI+DGNRR+AK+ L GH+AG + LI I C+ELGV V+ +AFS +N+
Sbjct: 70 MPRHVAFILDGNRRWAKRAGLTTSQGHEAGAKRLIDIAELCFELGVHTVSAFAFSTENWG 129
Query: 97 RRPDEVKDLMDLMLEKIDEMLKEESMAKQYGIRVYFKDEVDESQATAASANCSGLIREVG 156
R E+ +LM L+ + + I+ + + EV S + L++E+
Sbjct: 130 RDKIEIDNLMSLI----------QHYRNKSNIKFFHRSEVRVSVIGNKTKIPESLLKEIH 179
Query: 157 GVDT-----ENSMVMHAVHTSYEDQAVMANRTGHGVAPIEESEK--MQGECSMIKLVDIE 209
++ +N ++ AV S + + A ++ +++SEK ++ E L++ E
Sbjct: 180 EIEEATKGYKNKHLIMAVDYSGKFDIMHACKS-----LVKKSEKGLIREEDVDEALIERE 234
Query: 210 KYMYMAVAPEPDILVRSSGETRLSNFLLWQSSNCLLYSPDALWPEIGLWHLVWAILDFQR 269
+ P PD+++R+SGE R+SNF LWQ + L+ WP+ L+ A+ +QR
Sbjct: 235 LLTNCSDFPSPDLMIRTSGEQRISNFFLWQLAYSELFFSPVFWPDFDKDKLLEALASYQR 294
>AT5G58770.1 | Symbols: | dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative |
chr5:23734396-23735495 FORWARD
Length = 310
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 125/249 (50%), Gaps = 21/249 (8%)
Query: 37 IPSHFAFIMDGNRRYAKKGNLKLGAGHQAGFESLISILMYCYELGVKYVTIYAFSIDNFK 96
+P H A IMDGN R+AK L+ GH+AG E+L I+ C + G++ +T++AFS DN+
Sbjct: 77 MPKHVAIIMDGNGRWAKNRGLQPWDGHRAGVEALKEIVELCGKWGIQVLTVFAFSTDNWI 136
Query: 97 RRPDEVKDLMDLMLEKIDEMLKEE--SMAKQYGIRVYFKDEVDESQATAASANCSGLIRE 154
R E+ D + + LK E ++AK +R+ D S+ + + E
Sbjct: 137 RPRIEI----DFLFSLFERSLKTEFQNLAKN-NVRISIIG--DSSKLPKSLLRVINEVEE 189
Query: 155 VGGVDTENSMVMHAVHTSYED--QAV--MANRTGHGVAPIEESEKMQGECSMIKLVDIEK 210
V +T +++ ++ D QA +A R G +EE ++ +L++ E
Sbjct: 190 VTKNNTRLQLIVAVGYSGKYDVLQACRGIARRVKDGEIEVEEIDE--------RLIEEEL 241
Query: 211 YMYMAVAPEPDILVRSSGETRLSNFLLWQSSNCLLYSPDALWPEIGLWHLVWAILDFQRN 270
P PD+L+R+SGE R+SNFLLWQ + L+ LWP+ G + A++ FQ+
Sbjct: 242 ETNCTEFPYPDLLIRTSGELRVSNFLLWQLAYTELFFAQELWPDFGRSGFIEALMSFQQR 301
Query: 271 HSYLEKKRS 279
++S
Sbjct: 302 QRRFGGRKS 310
>AT2G23400.1 | Symbols: | dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative |
chr2:9963978-9965229 REVERSE
Length = 253
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 118/233 (50%), Gaps = 26/233 (11%)
Query: 37 IPSHFAFIMDGNRRYAKKGNLKLGAGHQAGFESLISILMYCYELGVKYVTIYAFSIDNFK 96
+P H +FI+DGNRR+AK+ L GH+AG + +I I C+ELG+ V+ +AFS +N+
Sbjct: 36 MPRHVSFILDGNRRWAKRDGLTTAQGHEAGTKRIIEIAEVCFELGIHTVSAFAFSTENWG 95
Query: 97 RRPDEVKDLMDLMLEKIDEMLKEESMAKQYGIRVYFKDEVDESQATAASANCSGLIREVG 156
R EVK LM L + LK I+ + + EV S + L++E+
Sbjct: 96 RDKFEVKCLMSLF----NHYLKS-------NIQYFQRKEVRVSVIGNKTKIPESLLKEIH 144
Query: 157 GVDTENSMVMHAVHTSYEDQAVMANRTGHGVAPIEESEKMQGECSMIKLVDIEKYMYMAV 216
++ ++ + + + ++ G+ E+ ++ L++ E +
Sbjct: 145 EIEEATKATRISISSWH-----LVKKSEKGLIREEDVDEA--------LIERELLTNCSD 191
Query: 217 APEPDILVRSSGETRLSNFLLWQ-SSNCLLYSPDALWPEIGLWHLVWAILDFQ 268
P PD+++R+SGE R+SNF LWQ + L YSP LWP+ L+ A+ +Q
Sbjct: 192 FPSPDLMIRTSGEQRISNFFLWQLAYTELFYSP-VLWPDFDKDKLLEALASYQ 243
>AT5G58784.1 | Symbols: | dehydrodolichyl diphosphate synthase |
chr5:23739950-23741267 REVERSE
Length = 302
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 31/231 (13%)
Query: 37 IPSHFAFIMDGNRRYAKKGNLKLGAGHQAGFESLISILMYCYELGVKYVTIYAFSIDNFK 96
+P H A I+DGNRR+A+K L GH+AG L+ C+ +G ++++AFS +N++
Sbjct: 70 MPKHVAVILDGNRRWAEKRGLGTSEGHEAGARRLMENAKDCFAMGTNTISLFAFSTENWE 129
Query: 97 RRPDEVKDLMDL----MLEKIDEMLKEESMAKQYGIRVYFK-------DEVDESQATAAS 145
R DEVK LM L + + + ++ G R +EV+E+ +
Sbjct: 130 RPEDEVKCLMALFEKYLASDMPYLRSDKIKISVIGNRTKLPESLLGLIEEVEEATKSYEG 189
Query: 146 ANCSGLIREVGGVDTENSMVMHAVHTSYEDQAVMANRTGHGVAPIEESEKMQGECSMIKL 205
N I G D ++ A + +AN+ G+ +E+ + K
Sbjct: 190 KNLIIAIDYSGRYD-----ILQACKS-------LANKVKDGLIQVEDINE--------KA 229
Query: 206 VDIEKYMYMAVAPEPDILVRSSGETRLSNFLLWQSSNCLLYSPDALWPEIG 256
++ E + P PD+L+R+SGE R+SNF LWQS+ LY P LWP+ G
Sbjct: 230 MEKELLTKCSEFPNPDLLIRTSGEQRISNFFLWQSAYTELYFPTVLWPDFG 280
>AT5G58780.1 | Symbols: | dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative |
chr5:23735755-23737284 REVERSE
Length = 302
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 113/236 (47%), Gaps = 13/236 (5%)
Query: 37 IPSHFAFIMDGNRRYAKKGNLKLGAGHQAGFESLISILMYCYELGVKYVTIYAFSIDNFK 96
+P H A IMDGNRR+AK+ L GH+AG + LI C++LG+ V+ +AFS +N+
Sbjct: 70 MPRHVAVIMDGNRRWAKRAGLLTSQGHEAGAKRLIEFSELCFKLGIHTVSAFAFSTENWG 129
Query: 97 RRPDEVKDLMDLMLEKIDEMLKEESMAKQYGIRVYFKDEVDESQATAASANCSGLIREVG 156
R EVK LM L I LK + I+ + ++E S + L+R V
Sbjct: 130 RHKIEVKCLMSL----IQHYLKSK-------IQYFQREETRVSVIGNLTKIPESLLRTVQ 178
Query: 157 GVD--TENSMVMHAVHTSYEDQAVMANRTGHGVAPIEESEKMQGECSMIKLVDIEKYMYM 214
++ T + H + + R + E ++ E L++ E
Sbjct: 179 EIEEATRSYKKKHLILAIDYSGRLDILRACKSIVKKSEKGLIREEDVDEALIERELLTNC 238
Query: 215 AVAPEPDILVRSSGETRLSNFLLWQSSNCLLYSPDALWPEIGLWHLVWAILDFQRN 270
P PD+L+R+SGE R+SNF LWQ + L+ LWP+ L+ A++ +QR
Sbjct: 239 TEFPSPDLLIRTSGEQRISNFFLWQLAYTELFFSPVLWPDFDKDKLLEALVSYQRR 294
>AT5G58782.1 | Symbols: | dehydrodolichyl diphosphate synthase,
putative / DEDOL-PP synthase, putative |
chr5:23738306-23739430 REVERSE
Length = 289
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 115/252 (45%), Gaps = 45/252 (17%)
Query: 37 IPSHFAFIMDGNRRYAKKGNLKLGAGHQAGFESLISILMYCYELGVKYVTIYAFSIDNFK 96
+P H A IMDGNRR+AK+ L G++AG + L+ C++LG+ V+ +AFS +N+
Sbjct: 57 MPRHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFADLCFKLGINTVSAFAFSTENWG 116
Query: 97 RRPDEVKDLMDLMLEKIDEMLKEESMAKQYGIRVYFKDEVDESQATAASANCSGLIREVG 156
R EVK LM Y + Y K ++ Q+ + +G
Sbjct: 117 RHKIEVKCLM-------------------YLFQRYLKSKIQFFQSKEIRVSV------IG 151
Query: 157 GVDTENSMVMHAVHTSYEDQAVMANRTGHGVAPIEESEKMQ--GECS---------MIKL 205
+ ++ VH ++A + + H + I+ S + G C +I+
Sbjct: 152 NLAKIPESLLRTVHEL--EEATKSYKKKHLILAIDYSGRFDILGACKNIVKKSEQGLIRE 209
Query: 206 VDIEKYMY-------MAVAPEPDILVRSSGETRLSNFLLWQSSNCLLYSPDALWPEIGLW 258
D+++ ++ P PD+L+R+SGE R+SNF LWQ + + LWP+
Sbjct: 210 EDVDETLFERELQTRCTEFPSPDLLIRTSGEQRISNFFLWQLAYTEFFFSPVLWPDFDKQ 269
Query: 259 HLVWAILDFQRN 270
+ A++ +QR
Sbjct: 270 KFIEALVSYQRR 281