Jatropha Genome Database

JcCB0550651.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0550651.10 - phase: 0 /partial
         (91 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G13430.1 | Symbols: IIL1 | IIL1 (ISOPROPYL MALATE ISOMERASE L...   159   2e-40
AT4G26970.1 | Symbols:  | aconitate hydratase/ copper ion bindin...    51   2e-07
AT4G35830.2 | Symbols:  | aconitate hydratase, cytoplasmic / cit...    50   3e-07
AT4G35830.1 | Symbols:  | aconitate hydratase, cytoplasmic / cit...    50   3e-07
AT2G05710.1 | Symbols:  | aconitate hydratase, cytoplasmic, puta...    50   3e-07

>AT4G13430.1 | Symbols: IIL1 | IIL1 (ISOPROPYL MALATE ISOMERASE
           LARGE SUBUNIT 1); 4 iron, 4 sulfur cluster binding /
           hydro-lyase/ lyase | chr4:7804194-7807789 REVERSE
          Length = 509

 Score =  159 bits (403), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 72/91 (79%), Positives = 85/91 (93%)

Query: 1   VPPTLRFVMDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLNMEERMTLCN 60
           VPPT+RF++DGEMP YL AKDLILQIIGEISVAGATYK+MEF GTT+ESL+MEERMTLCN
Sbjct: 233 VPPTMRFILDGEMPSYLQAKDLILQIIGEISVAGATYKTMEFSGTTIESLSMEERMTLCN 292

Query: 61  MVVEAGGKNGVVPADSTTFKYLEDKTSVPYQ 91
           MVVEAGGKNGV+P D+TT  Y+E++TSVP++
Sbjct: 293 MVVEAGGKNGVIPPDATTLNYVENRTSVPFE 323


>AT4G26970.1 | Symbols:  | aconitate hydratase/ copper ion binding |
           chr4:13543077-13548427 FORWARD
          Length = 995

 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%)

Query: 1   VPPTLRFVMDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLNMEERMTLCN 60
           +P  + F +DG++ + + A DL+L +   +   G   K +EF G  +  L++ +R T+ N
Sbjct: 340 LPGVVGFKLDGKLKEGVTATDLVLTVTQILRKHGVVGKFVEFYGEGMSELSLADRATIAN 399

Query: 61  MVVEAGGKNGVVPADSTTFKYLE 83
           M  E G   G  P D  T +YL+
Sbjct: 400 MSPEYGATMGFFPVDHVTLEYLK 422


>AT4G35830.2 | Symbols:  | aconitate hydratase, cytoplasmic /
           citrate hydro-lyase / aconitase (ACO) |
           chr4:16973007-16977278 REVERSE
          Length = 795

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 42/83 (50%)

Query: 1   VPPTLRFVMDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLNMEERMTLCN 60
           +P  + F + G++ D + A DL+L +   +   G   K +EF G  +  L++ +R T+ N
Sbjct: 140 LPGVVGFKLTGKLRDGMTATDLVLTVTQMLRKHGVVGKFVEFHGEGMRELSLADRATIAN 199

Query: 61  MVVEAGGKNGVVPADSTTFKYLE 83
           M  E G   G  P D  T +YL 
Sbjct: 200 MSPEYGATMGFFPVDHVTLQYLR 222


>AT4G35830.1 | Symbols:  | aconitate hydratase, cytoplasmic /
           citrate hydro-lyase / aconitase (ACO) |
           chr4:16973007-16977949 REVERSE
          Length = 898

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 42/83 (50%)

Query: 1   VPPTLRFVMDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLNMEERMTLCN 60
           +P  + F + G++ D + A DL+L +   +   G   K +EF G  +  L++ +R T+ N
Sbjct: 243 LPGVVGFKLTGKLRDGMTATDLVLTVTQMLRKHGVVGKFVEFHGEGMRELSLADRATIAN 302

Query: 61  MVVEAGGKNGVVPADSTTFKYLE 83
           M  E G   G  P D  T +YL 
Sbjct: 303 MSPEYGATMGFFPVDHVTLQYLR 325


>AT2G05710.1 | Symbols:  | aconitate hydratase, cytoplasmic,
           putative / citrate hydro-lyase/aconitase, putative |
           chr2:2141591-2146350 FORWARD
          Length = 990

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 43/83 (51%)

Query: 1   VPPTLRFVMDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVESLNMEERMTLCN 60
           +P  + F + G+M + + A DL+L +   +   G   K +EF G  +  L++ +R T+ N
Sbjct: 335 LPGVVGFKLAGKMRNGVTATDLVLTVTQMLRKHGVVGKFVEFYGNGMSGLSLADRATIAN 394

Query: 61  MVVEAGGKNGVVPADSTTFKYLE 83
           M  E G   G  P D  T +YL+
Sbjct: 395 MSPEYGATMGFFPVDHVTLQYLK 417