Jatropha Genome Database

JcCB0546741.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0546741.10 + phase: 0 
         (516 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G20340.1 | Symbols:  | tyrosine decarboxylase, putative | chr...   589   e-168
AT4G28680.1 | Symbols: TYRDC, TYRDC1 | tyrosine decarboxylase, p...   586   e-167
AT4G28680.2 | Symbols: TYRDC, TYRDC1 | tyrosine decarboxylase, p...   582   e-166

>AT2G20340.1 | Symbols:  | tyrosine decarboxylase, putative |
           chr2:8779804-8782490 FORWARD
          Length = 490

 Score =  589 bits (1518), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 267/498 (53%), Positives = 358/498 (71%), Gaps = 12/498 (2%)

Query: 16  NNKQEAMNPLNSDEFRRQAHMIVDFIADYYQNIEKYPVLSQVEPGYLRNCLPNSAPSHPE 75
           N   + + P++S++ R   H++VDFIADYY+ IE +PVLSQV+PGYL   LP+SAP HPE
Sbjct: 3   NGSGKVLKPMDSEQLREYGHLMVDFIADYYKTIEDFPVLSQVQPGYLHKLLPDSAPDHPE 62

Query: 76  SIETILQDVGKHIVPGITHWQSPNYFAYFPSSGSIASFLGEMLSTGFNVVGFNWMSSPAA 135
           +++ +L DV   I+PG+THWQSP++FAY+PS+ S+A FLGEMLS G  +VGF+W++SPAA
Sbjct: 63  TLDQVLDDVRAKILPGVTHWQSPSFFAYYPSNSSVAGFLGEMLSAGLGIVGFSWVTSPAA 122

Query: 136 TELESIVMDWLGQMLELPSRFLFSGNGGGVIHGTTCEAILCTLIAARDQTLGRIGKSNIT 195
           TELE IV+DW+ ++L LP +F+  GNGGGVI G+  EA+L  LIAARD+ L  +GK+ + 
Sbjct: 123 TELEMIVLDWVAKLLNLPEQFMSKGNGGGVIQGSASEAVLVVLIAARDKVLRSVGKNALE 182

Query: 196 KLVVYGSDQTHSAFQKAAKIAGIDPQNFRAIKTTKSTAFALSPDLLRLSIRSDIEKGLIP 255
           KLVVY SDQTHSA QKA +IAGI P+N R + T  ST +AL P+ L+ ++  D+E GLIP
Sbjct: 183 KLVVYSSDQTHSALQKACQIAGIHPENCRVLTTDSSTNYALRPESLQEAVSRDLEAGLIP 242

Query: 256 LFLCXXXXXXXXXXXDPIRPLCNVAKEYSIWVHVDAAYAGNACICPEFQHFLDGLEEANS 315
            FLC           DP+  L  +A    IW HVDAAYAG+ACICPE++ ++DG+E A+S
Sbjct: 243 FFLCANVGTTSSTAVDPLAALGKIANSNGIWFHVDAAYAGSACICPEYRQYIDGVETADS 302

Query: 316 FSLNAHKWLFTNLDCCCLWVKDPRGLTQSLSTNPEFLRNKASDSAQVVDYKDWQIALSRR 375
           F++NAHKW  TN DC  LWVKD   LT +LSTNPEFL+NKAS +  VVDYKDWQI L RR
Sbjct: 303 FNMNAHKWFLTNFDCSLLWVKDQDSLTLALSTNPEFLKNKASQANLVVDYKDWQIPLGRR 362

Query: 376 FRSMKLWLVLRSYGVSNLRKFLRQHIEMAKLFEGLVMEDKRFEIVVPRNFAMVCFRILAE 435
           FRS+KLW+VLR YG   L+ ++R HI++AK FE LV +D  FEIV PR FA+VCFR++  
Sbjct: 363 FRSLKLWMVLRLYGSETLKSYIRNHIKLAKEFEQLVSQDPNFEIVTPRIFALVCFRLVP- 421

Query: 436 AIEIGKNGVQILPNHETLANELNRKLLESINASGCIYMSHAMVEGVYFIRFAVGATLTED 495
                      + + E   N  NR+LL+++N+SG ++MSH  + G   +R A+GA LTE+
Sbjct: 422 -----------VKDEEKKCNNRNRELLDAVNSSGKLFMSHTALSGKIVLRCAIGAPLTEE 470

Query: 496 RHVIMAWKVIKEHANAIL 513
           +HV  AWK+I+E A+ +L
Sbjct: 471 KHVKEAWKIIQEEASYLL 488


>AT4G28680.1 | Symbols: TYRDC, TYRDC1 | tyrosine decarboxylase,
           putative | chr4:14155248-14158546 FORWARD
          Length = 545

 Score =  586 bits (1510), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 269/502 (53%), Positives = 361/502 (71%), Gaps = 16/502 (3%)

Query: 13  KSSNNKQEAMNPLNSDEFRRQAHMIVDFIADYYQNIEK----YPVLSQVEPGYLRNCLPN 68
           K++  K   M P++S+  R Q H++VDFIADYY+N++     +PVLSQV+PGYLR+ LP+
Sbjct: 48  KANGAKVVKMKPMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPD 107

Query: 69  SAPSHPESIETILQDVGKHIVPGITHWQSPNYFAYFPSSGSIASFLGEMLSTGFNVVGFN 128
           SAP  PES++ +L DV K I+PGITHWQSP+YFAY+ SS S+A FLGEML+ G +VVGF 
Sbjct: 108 SAPERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFT 167

Query: 129 WMSSPAATELESIVMDWLGQMLELPSRFLFSGNGGGVIHGTTCEAILCTLIAARDQTLGR 188
           W++SPAATELE IV+DWL ++L+LP  FL +GNGGGVI GT CEA+L  ++AARD+ L +
Sbjct: 168 WLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKK 227

Query: 189 IGKSNITKLVVYGSDQTHSAFQKAAKIAGIDPQNFRAIKTTKSTAFALSPDLLRLSIRSD 248
           +GK+ + +LVVYGSDQTHS+F+KA  I GI  +N R +KT  ST + + P+ L  +I  D
Sbjct: 228 VGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHD 287

Query: 249 IEKGLIPLFLCXXXXXXXXXXXDPIRPLCNVAKEYSIWVHVDAAYAGNACICPEFQHFLD 308
           + KG IP F+C           DP+ PL N+AK+Y IW+HVDAAYAGNACICPE++ F+D
Sbjct: 288 LAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFID 347

Query: 309 GLEEANSFSLNAHKWLFTNLDCCCLWVKDPRGLTQSLSTNPEFLRNKASDSAQVVDYKDW 368
           G+E A+SF++NAHKWLF N  C  LWVKD   L  +L TNPE+L  K S    VV+YKDW
Sbjct: 348 GIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDW 407

Query: 369 QIALSRRFRSMKLWLVLRSYGVSNLRKFLRQHIEMAKLFEGLVMEDKRFEIVVPRNFAMV 428
           QI+LSRRFRS+KLW+VLR YG  NLR F+R H+ +AK FE  V +D  FE+V  R F++V
Sbjct: 408 QISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLV 467

Query: 429 CFRILAEAIEIGKNGVQILPNHETLANELNRKLLESINASGCIYMSHAMVEGVYFIRFAV 488
           CFR+              +   E   NE NR+LL ++N++G I++SH  + G + +RFAV
Sbjct: 468 CFRLAP------------VDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAV 515

Query: 489 GATLTEDRHVIMAWKVIKEHAN 510
           GA LTE++HV  AW++I++HA+
Sbjct: 516 GAPLTEEKHVTEAWQIIQKHAS 537


>AT4G28680.2 | Symbols: TYRDC, TYRDC1 | tyrosine decarboxylase,
           putative | chr4:14155248-14158546 FORWARD
          Length = 547

 Score =  582 bits (1499), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 269/504 (53%), Positives = 362/504 (71%), Gaps = 18/504 (3%)

Query: 13  KSSNNKQEAMNPLNSDEFRRQAHMIVDFIADYYQNIEK----YPVLSQVEPGYLRNCLPN 68
           K++  K   M P++S+  R Q H++VDFIADYY+N++     +PVLSQV+PGYLR+ LP+
Sbjct: 48  KANGAKVVKMKPMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPD 107

Query: 69  SAPSHPESIETILQDVGKHIVPGITHWQSPNYFAYFPSSGSIASFLGEMLSTGFNVVGFN 128
           SAP  PES++ +L DV K I+PGITHWQSP+YFAY+ SS S+A FLGEML+ G +VVGF 
Sbjct: 108 SAPERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFT 167

Query: 129 WMSSPAATELESIVMDWLGQMLELPSRFLFSGNGGGVIHGTTCEAILCTLIAARDQTLGR 188
           W++SPAATELE IV+DWL ++L+LP  FL +GNGGGVI GT CEA+L  ++AARD+ L +
Sbjct: 168 WLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKK 227

Query: 189 IGKSNITKLVVYGSDQTHSAFQKAAKIAGIDPQNFRAIKTTKSTAFALSPDLLRLSIRSD 248
           +GK+ + +LVVYGSDQTHS+F+KA  I GI  +N R +KT  ST + + P+ L  +I  D
Sbjct: 228 VGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHD 287

Query: 249 IEKGLIPLFLCXXXXXXXXXXXDPIRPLCNVAKEYSIWVHVDAAYAGNACICPEFQHFLD 308
           + KG IP F+C           DP+ PL N+AK+Y IW+HVDAAYAGNACICPE++ F+D
Sbjct: 288 LAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFID 347

Query: 309 GLEEANSFSLNAHKWLFTNLDCCCLWVKDPRGLTQSLSTNPEFL--RNKASDSAQVVDYK 366
           G+E A+SF++NAHKWLF N  C  LWVKD   L  +L TNPE+L  + K S    VV+YK
Sbjct: 348 GIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVKVSKKDTVVNYK 407

Query: 367 DWQIALSRRFRSMKLWLVLRSYGVSNLRKFLRQHIEMAKLFEGLVMEDKRFEIVVPRNFA 426
           DWQI+LSRRFRS+KLW+VLR YG  NLR F+R H+ +AK FE  V +D  FE+V  R F+
Sbjct: 408 DWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFS 467

Query: 427 MVCFRILAEAIEIGKNGVQILPNHETLANELNRKLLESINASGCIYMSHAMVEGVYFIRF 486
           +VCFR+              +   E   NE NR+LL ++N++G I++SH  + G + +RF
Sbjct: 468 LVCFRLAP------------VDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRF 515

Query: 487 AVGATLTEDRHVIMAWKVIKEHAN 510
           AVGA LTE++HV  AW++I++HA+
Sbjct: 516 AVGAPLTEEKHVTEAWQIIQKHAS 539