Jatropha Genome Database
- JcCB0545911.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0545911.10 - phase: 0 /partial
(102 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G49620.1 | Symbols: KRP7, ICN6, ICK5 | ICK5; cyclin binding /... 76 4e-15
AT3G19150.1 | Symbols: KRP6, ICK4 | KRP6 (KIP-RELATED PROTEIN 6)... 74 2e-14
AT5G48820.1 | Symbols: KRP3, ICK6 | ICK6 (INHIBITOR/INTERACTOR W... 72 5e-14
AT2G32710.2 | Symbols: KRP4, ACK2, ICK7 | KRP4; cyclin binding /... 67 2e-12
AT2G32710.1 | Symbols: KRP4, ACK2, ICK7 | KRP4; cyclin binding /... 67 2e-12
AT3G24810.1 | Symbols: ICK3, KRP5 | ICK3; cyclin-dependent prote... 61 1e-10
AT2G23430.1 | Symbols: ICK1, KRP1 | ICK1; cyclin-dependent prote... 59 6e-10
AT3G50630.1 | Symbols: KRP2, ICK2 | KRP2 (KIP-RELATED PROTEIN 2)... 55 8e-09
>AT1G49620.1 | Symbols: KRP7, ICN6, ICK5 | ICK5; cyclin binding /
cyclin-dependent protein kinase inhibitor |
chr1:18365692-18366559 REVERSE
Length = 195
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 39/46 (84%)
Query: 57 PTESELDEFFTEAEKSIQKQFAEKYNYDIVKDEPLEGRYEWVRLKP 102
PT++ELD+FF+ AE+ QK+F EKYNYDIV D PLEGRY+WV LKP
Sbjct: 150 PTQAELDDFFSAAERYEQKRFTEKYNYDIVNDTPLEGRYQWVSLKP 195
>AT3G19150.1 | Symbols: KRP6, ICK4 | KRP6 (KIP-RELATED PROTEIN 6);
cyclin binding / cyclin-dependent protein kinase
inhibitor | chr3:6616628-6617655 REVERSE
Length = 196
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
Query: 5 VEVETSVYYSCRERRETTPSSQLRPESSDELDSIARPSPEANTLRRSTAEKMPTESELDE 64
E ETS + + R+ET+P S+ E++ E++S + A ++ K PT +E+++
Sbjct: 104 TETETSTFITSNFRKETSPVSEGLGETTTEMESSS-----ATKRKQPGVRKTPTAAEIED 158
Query: 65 FFTEAEK--SIQKQFAEKYNYDIVKDEPLEGRYEWVRL 100
F+E E +KQF EKYN+DIV DEPLEGRY+W RL
Sbjct: 159 LFSELESQDDKKKQFIEKYNFDIVNDEPLEGRYKWDRL 196
>AT5G48820.1 | Symbols: KRP3, ICK6 | ICK6 (INHIBITOR/INTERACTOR WITH
CYCLIN-DEPENDENT KINASE); cyclin binding /
cyclin-dependent protein kinase inhibitor |
chr5:19792608-19794346 REVERSE
Length = 222
Score = 72.4 bits (176), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 22/111 (19%)
Query: 9 TSVYYSCRER----------RETTPSSQLRPESSDELDSIARPSPEANTLRRSTAE---- 54
SV SC E RE+TP + + ++++ + P ++ R+T E
Sbjct: 117 VSVQVSCGENSLGFESRHSTRESTPCNFV-----EDMEIMVTPGSSTRSMCRATKEYTRE 171
Query: 55 ---KMPTESELDEFFTEAEKSIQKQFAEKYNYDIVKDEPLEGRYEWVRLKP 102
+PT SE++EFF AE+ Q+ F EKYN+DIV D PL GRYEWV++KP
Sbjct: 172 QDNVIPTTSEMEEFFAYAEQQQQRLFMEKYNFDIVNDIPLSGRYEWVQVKP 222
>AT2G32710.2 | Symbols: KRP4, ACK2, ICK7 | KRP4; cyclin binding /
cyclin-dependent protein kinase inhibitor |
chr2:13873496-13875350 FORWARD
Length = 286
Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 9/96 (9%)
Query: 13 YSCRERRETTPSSQLR-------PESSDELD-SIARPSPEANTLRRSTAEKMPTESELDE 64
++ R RE+TP S +R P SS +L+ ++ + ++L RS + PT E+DE
Sbjct: 190 HTQRTTRESTPCSLIRRPEIMTTPGSSTKLNICVSESNQREDSLSRS-HRRRPTTPEMDE 248
Query: 65 FFTEAEKSIQKQFAEKYNYDIVKDEPLEGRYEWVRL 100
FF+ AE+ QKQF EKYN+D V ++PL GR+EW ++
Sbjct: 249 FFSGAEEEQQKQFIEKYNFDPVNEQPLPGRFEWTKV 284
>AT2G32710.1 | Symbols: KRP4, ACK2, ICK7 | KRP4; cyclin binding /
cyclin-dependent protein kinase inhibitor |
chr2:13873496-13875350 FORWARD
Length = 289
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 58/93 (62%), Gaps = 9/93 (9%)
Query: 16 RERRETTPSSQLR-------PESSDELD-SIARPSPEANTLRRSTAEKMPTESELDEFFT 67
R RE+TP S +R P SS +L+ ++ + ++L RS + PT E+DEFF+
Sbjct: 196 RTTRESTPCSLIRRPEIMTTPGSSTKLNICVSESNQREDSLSRS-HRRRPTTPEMDEFFS 254
Query: 68 EAEKSIQKQFAEKYNYDIVKDEPLEGRYEWVRL 100
AE+ QKQF EKYN+D V ++PL GR+EW ++
Sbjct: 255 GAEEEQQKQFIEKYNFDPVNEQPLPGRFEWTKV 287
>AT3G24810.1 | Symbols: ICK3, KRP5 | ICK3; cyclin-dependent protein
kinase inhibitor | chr3:9060990-9061742 FORWARD
Length = 189
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 34/44 (77%)
Query: 59 ESELDEFFTEAEKSIQKQFAEKYNYDIVKDEPLEGRYEWVRLKP 102
+SE+++FF AE+ Q+ F +KYN+DIV D PL GRYEWV++ P
Sbjct: 146 QSEIEDFFASAEQQQQRFFIQKYNFDIVSDNPLPGRYEWVKVMP 189
>AT2G23430.1 | Symbols: ICK1, KRP1 | ICK1; cyclin-dependent protein
kinase inhibitor | chr2:9977020-9977921 REVERSE
Length = 191
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 40/45 (88%)
Query: 56 MPTESELDEFFTEAEKSIQKQFAEKYNYDIVKDEPLEGRYEWVRL 100
MPTESE+++FF EAEK ++++F +KYN+D K++PLEGRYEWV+L
Sbjct: 146 MPTESEIEDFFVEAEKQLKEKFKKKYNFDFEKEKPLEGRYEWVKL 190
>AT3G50630.1 | Symbols: KRP2, ICK2 | KRP2 (KIP-RELATED PROTEIN 2);
cyclin-dependent protein kinase inhibitor/ kinase
inhibitor/ protein binding | chr3:18800508-18801366
FORWARD
Length = 209
Score = 55.1 bits (131), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 5/59 (8%)
Query: 48 LRRSTAEKMPTESELDEFFTEAEKSIQKQFAE---KYNYDIVKDEPL-EGRYEWVRLKP 102
LR+S E + E+EL++FF AEK ++ + E KYN+D KDEPL GRYEWV+L P
Sbjct: 152 LRKSLHETVK-EAELEDFFQVAEKDLRNKLLECSMKYNFDFEKDEPLGGGRYEWVKLNP 209