Jatropha Genome Database
- JcCB0542741.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0542741.10 + phase: 0 /partial
(97 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATE... 145 6e-36
AT1G51950.1 | Symbols: IAA18 | IAA18 (INDOLE-3-ACETIC ACID INDUC... 139 4e-34
AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOLE-3-ACETIC ACID... 88 1e-18
AT1G04100.1 | Symbols: IAA10 | IAA10; transcription factor | chr... 86 3e-18
AT1G04550.2 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN... 86 4e-18
AT4G28640.1 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID INDUC... 85 9e-18
AT4G28640.2 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID INDUC... 85 1e-17
AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor | chr... 84 3e-17
AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor | chr... 84 3e-17
AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor | chr... 84 3e-17
AT2G22670.2 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 78 1e-15
AT2G22670.3 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 78 1e-15
AT2G22670.1 | Symbols: IAA8 | IAA8; transcription factor | chr2:... 78 1e-15
AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATE... 76 4e-15
AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIB... 76 5e-15
AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIB... 76 5e-15
AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID ... 72 9e-14
AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7... 71 1e-13
AT3G23050.2 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7... 71 1e-13
AT3G04730.1 | Symbols: IAA16 | IAA16; transcription factor | chr... 71 1e-13
AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN RESISTANT 3); t... 69 6e-13
AT3G62100.1 | Symbols: IAA30 | IAA30 (INDOLE-3-ACETIC ACID INDUC... 65 7e-12
AT1G80390.1 | Symbols: IAA15 | IAA15 (INDOLE-3-ACETIC ACID INDUC... 64 1e-11
AT1G52830.1 | Symbols: IAA6, SHY1 | IAA6 (INDOLE-3-ACETIC ACID 6... 63 3e-11
AT2G46990.1 | Symbols: IAA20 | IAA20 (INDOLE-3-ACETIC ACID INDUC... 63 4e-11
AT3G15540.1 | Symbols: IAA19, MSG2 | IAA19 (INDOLE-3-ACETIC ACID... 61 1e-10
AT4G14560.1 | Symbols: IAA1, AXR5 | IAA1 (INDOLE-3-ACETIC ACID I... 60 3e-10
AT3G23030.1 | Symbols: IAA2 | IAA2 (INDOLE-3-ACETIC ACID INDUCIB... 60 3e-10
AT3G17600.1 | Symbols: IAA31 | IAA31 (INDOLE-3-ACETIC ACID INDUC... 59 5e-10
AT1G04240.1 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2); tr... 59 8e-10
AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-11 (AUXIN INDUCI... 55 7e-09
AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9); tr... 55 7e-09
AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9); tr... 55 8e-09
AT4G32280.1 | Symbols: IAA29 | IAA29 (INDOLE-3-ACETIC ACID INDUC... 54 1e-08
AT1G04550.1 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN... 54 2e-08
AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 54 2e-08
AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 54 2e-08
AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);... 54 3e-08
AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | IAA5 (INDOLE-3... 50 2e-07
AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE... 50 2e-07
AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE... 50 2e-07
AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE... 50 2e-07
AT3G61830.1 | Symbols: ARF18 | ARF18 (AUXIN RESPONSE FACTOR 18);... 50 3e-07
AT1G34310.1 | Symbols: ARF12 | ARF12 (AUXIN RESPONSE FACTOR 12);... 48 1e-06
AT1G35540.1 | Symbols: ARF14 | ARF14 (AUXIN RESPONSE FACTOR 14);... 48 2e-06
AT2G01200.2 | Symbols: IAA32 | IAA32 (INDOLE-3-ACETIC ACID INDUC... 47 2e-06
AT1G34410.1 | Symbols: ARF21 | ARF21 (AUXIN RESPONSE FACTOR 21);... 47 3e-06
AT1G15050.1 | Symbols: IAA34 | IAA34 (INDOLE-3-ACETIC ACID INDUC... 45 7e-06
>AT3G16500.1 | Symbols: PAP1, IAA26 | PAP1 (PHYTOCHROME-ASSOCIATED
PROTEIN 1); transcription factor | chr3:5612801-5614208
REVERSE
Length = 269
Score = 145 bits (365), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/97 (74%), Positives = 80/97 (82%), Gaps = 5/97 (5%)
Query: 1 MENCKKGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSK 60
+E K+GMFVKINMDGVPIGRKVDL AY+SYE+LS VD+LFRGLLAAQRD S G
Sbjct: 145 VETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDG----- 199
Query: 61 QEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
Q EEK I G+LDG GE+TL YEDNEGD+MLVGDVPWQ
Sbjct: 200 QGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQ 236
>AT1G51950.1 | Symbols: IAA18 | IAA18 (INDOLE-3-ACETIC ACID
INDUCIBLE 18); transcription factor |
chr1:19305670-19307130 FORWARD
Length = 267
Score = 139 bits (350), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 76/91 (83%), Gaps = 5/91 (5%)
Query: 7 GMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKA 66
GMFVKINM GVPIGRKVDL A++SYE+LS VD+LFRGLLAAQRD S E+EK
Sbjct: 149 GMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRD-----FPSSIEDEKP 203
Query: 67 ITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
ITG+LDG+GEYTL YEDNEGD+MLVGDVPWQ
Sbjct: 204 ITGLLDGNGEYTLTYEDNEGDKMLVGDVPWQ 234
>AT5G25890.1 | Symbols: IAA28, IAR2 | IAA28 (INDOLE-3-ACETIC ACID
INDUCIBLE 28); transcription factor |
chr5:9033480-9034554 FORWARD
Length = 175
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 61/90 (67%), Gaps = 23/90 (25%)
Query: 8 MFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAI 67
++VKINM+GVPIGRKV+L AY++Y++LS AVD+LF +++DS
Sbjct: 81 LYVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLF-----SKKDS--------------- 120
Query: 68 TGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
D + +YTLVYED EGD++LVGDVPW+
Sbjct: 121 ---WDLNRQYTLVYEDTEGDKVLVGDVPWE 147
>AT1G04100.1 | Symbols: IAA10 | IAA10; transcription factor |
chr1:1059809-1061026 FORWARD
Length = 261
Score = 86.3 bits (212), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
Query: 1 MENCKKGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSK 60
+++ + M VK+ MDGV IGRKVDL A DSY L +D +F + + S+ G K
Sbjct: 145 IKSSRTSMLVKVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGY--K 202
Query: 61 QEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+E + +LDGS EY + Y+D +GD MLVGDVPWQ
Sbjct: 203 TIKETCTSKLLDGSSEYIITYQDKDGDWMLVGDVPWQ 239
>AT1G04550.2 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN
12); transcription factor/ transcription repressor |
chr1:1240582-1241810 FORWARD
Length = 239
Score = 85.9 bits (211), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 11/89 (12%)
Query: 9 FVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAIT 68
FVK+NMDGV IGRKVD++A+ SYE L+ ++E+F G+ + +E+ K +
Sbjct: 126 FVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGT----------TCREKVKPLR 175
Query: 69 GVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+LDGS ++ L YED EGD MLVGDVPW+
Sbjct: 176 -LLDGSSDFVLTYEDKEGDWMLVGDVPWR 203
>AT4G28640.1 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID
INDUCIBLE 11); transcription factor |
chr4:14142288-14143755 FORWARD
Length = 246
Score = 85.1 bits (209), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 5 KKGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEE 64
+ MFVK+ MDG+PIGRK+DL A+ YE LS ++E+F R G M E
Sbjct: 134 RNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHM-----E 188
Query: 65 KAITGVLDGSGEYTLVYEDNEGDRMLVGDVPW 96
+ + DGS L YED EGD MLVGDVPW
Sbjct: 189 TPVKILPDGSSGLVLTYEDKEGDWMLVGDVPW 220
>AT4G28640.2 | Symbols: IAA11 | IAA11 (INDOLE-3-ACETIC ACID
INDUCIBLE 11); transcription factor |
chr4:14142288-14143928 FORWARD
Length = 302
Score = 84.7 bits (208), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 5 KKGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEE 64
+ MFVK+ MDG+PIGRK+DL A+ YE LS ++E+F R G M E
Sbjct: 134 RNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHM-----E 188
Query: 65 KAITGVLDGSGEYTLVYEDNEGDRMLVGDVPW 96
+ + DGS L YED EGD MLVGDVPW
Sbjct: 189 TPVKILPDGSSGLVLTYEDKEGDWMLVGDVPW 220
>AT2G33310.3 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 246
Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 8/89 (8%)
Query: 9 FVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAIT 68
F+K+NMDGV IGRKVDL A+ SYE L+ ++++F ++ G + + K +
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMF-------FRTNPGTVGLTSQFTKPLR 182
Query: 69 GVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+LDGS E+ L YED EGD MLVGDVPW+
Sbjct: 183 -LLDGSSEFVLTYEDKEGDWMLVGDVPWR 210
>AT2G33310.1 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 246
Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 8/89 (8%)
Query: 9 FVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAIT 68
F+K+NMDGV IGRKVDL A+ SYE L+ ++++F ++ G + + K +
Sbjct: 130 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMF-------FRTNPGTVGLTSQFTKPLR 182
Query: 69 GVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+LDGS E+ L YED EGD MLVGDVPW+
Sbjct: 183 -LLDGSSEFVLTYEDKEGDWMLVGDVPWR 210
>AT2G33310.2 | Symbols: IAA13 | IAA13; transcription factor |
chr2:14114569-14115757 REVERSE
Length = 247
Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 8/89 (8%)
Query: 9 FVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAIT 68
F+K+NMDGV IGRKVDL A+ SYE L+ ++++F ++ G + + K +
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMF-------FRTNPGTVGLTSQFTKPLR 183
Query: 69 GVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+LDGS E+ L YED EGD MLVGDVPW+
Sbjct: 184 -LLDGSSEFVLTYEDKEGDWMLVGDVPWR 211
>AT2G22670.2 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 319
Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 10/94 (10%)
Query: 8 MFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEK-- 65
+FVK++MDG P RKVDL+ Y SY++LS+A++++F Q G+ Q E+
Sbjct: 200 LFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQ-----CGLHGAQGRERMS 254
Query: 66 --AITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+ +L GS E+ L YED +GD MLVGDVPW+
Sbjct: 255 EIKLKDLLHGS-EFVLTYEDKDGDWMLVGDVPWE 287
>AT2G22670.3 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 321
Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 10/94 (10%)
Query: 8 MFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEK-- 65
+FVK++MDG P RKVDL+ Y SY++LS+A++++F Q G+ Q E+
Sbjct: 200 LFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQ-----CGLHGAQGRERMS 254
Query: 66 --AITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+ +L GS E+ L YED +GD MLVGDVPW+
Sbjct: 255 EIKLKDLLHGS-EFVLTYEDKDGDWMLVGDVPWE 287
>AT2G22670.1 | Symbols: IAA8 | IAA8; transcription factor |
chr2:9637136-9638459 FORWARD
Length = 321
Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 59/94 (62%), Gaps = 10/94 (10%)
Query: 8 MFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEK-- 65
+FVK++MDG P RKVDL+ Y SY++LS+A++++F Q G+ Q E+
Sbjct: 200 LFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQ-----CGLHGAQGRERMS 254
Query: 66 --AITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+ +L GS E+ L YED +GD MLVGDVPW+
Sbjct: 255 EIKLKDLLHGS-EFVLTYEDKDGDWMLVGDVPWE 287
>AT4G29080.1 | Symbols: PAP2, IAA27 | PAP2 (PHYTOCHROME-ASSOCIATED
PROTEIN 2); transcription factor |
chr4:14323665-14325213 REVERSE
Length = 305
Score = 75.9 bits (185), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 8 MFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAI 67
++VK++M+G P RK+DLK Y SY +LS+A++++F Q S GG E +
Sbjct: 186 LYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSH-GGCGRDGLNESRL 244
Query: 68 TGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
T +L GS EY + YED + D MLVGDVPW+
Sbjct: 245 TDLLRGS-EYVVTYEDKDSDWMLVGDVPWE 273
>AT5G65670.1 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE
9); transcription factor | chr5:26254463-26256134
FORWARD
Length = 338
Score = 75.9 bits (185), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 7 GMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKA 66
+FVK++MDG P RKVDL++Y +Y +LS+A++++F Q S+ G E
Sbjct: 216 ALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSN-GAAGKDMLSETK 274
Query: 67 ITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+ +L+G +Y L YED +GD MLVGDVPW+
Sbjct: 275 LKDLLNGK-DYVLTYEDKDGDWMLVGDVPWE 304
>AT5G65670.2 | Symbols: IAA9 | IAA9 (INDOLE-3-ACETIC ACID INDUCIBLE
9); transcription factor | chr5:26254463-26256134
FORWARD
Length = 336
Score = 75.9 bits (185), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 2/91 (2%)
Query: 7 GMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKA 66
+FVK++MDG P RKVDL++Y +Y +LS+A++++F Q S+ G E
Sbjct: 216 ALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSN-GAAGKDMLSETK 274
Query: 67 ITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+ +L+G +Y L YED +GD MLVGDVPW+
Sbjct: 275 LKDLLNGK-DYVLTYEDKDGDWMLVGDVPWE 304
>AT4G14550.1 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID
INDUCIBLE 14); protein binding / transcription factor/
transcription repressor | chr4:8348521-8349923 REVERSE
Length = 228
Score = 71.6 bits (174), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 9 FVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAIT 68
FVK++MDG P RKVDLK Y SY+ LS A+ ++F A G++ E K +
Sbjct: 112 FVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSY--GAQGMIDFMNESKVMD 169
Query: 69 GVLDGSGEYTLVYEDNEGDRMLVGDVPW 96
L S EY YED +GD MLVGDVPW
Sbjct: 170 --LLNSSEYVPSYEDKDGDWMLVGDVPW 195
>AT3G23050.1 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7);
transcription factor | chr3:8194768-8196716 FORWARD
Length = 243
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 9 FVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAIT 68
VK++MDG P RKVDLK Y SY+ LS A+ ++F + A G++ E K +
Sbjct: 126 LVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMG--NYGAQGMIDFMNESKLMN 183
Query: 69 GVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
L S EY YED +GD MLVGDVPW+
Sbjct: 184 --LLNSSEYVPSYEDKDGDWMLVGDVPWE 210
>AT3G23050.2 | Symbols: IAA7, AXR2 | IAA7 (INDOLE-3-ACETIC ACID 7);
transcription factor | chr3:8194768-8196214 FORWARD
Length = 210
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 9 FVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAIT 68
VK++MDG P RKVDLK Y SY+ LS A+ ++F + A G++ E K +
Sbjct: 126 LVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMG--NYGAQGMIDFMNESKLMN 183
Query: 69 GVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
L S EY YED +GD MLVGDVPW+
Sbjct: 184 --LLNSSEYVPSYEDKDGDWMLVGDVPWE 210
>AT3G04730.1 | Symbols: IAA16 | IAA16; transcription factor |
chr3:1288993-1290415 REVERSE
Length = 236
Score = 70.9 bits (172), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 4 CKKGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEE 63
C +VK++MDG P RK+DLK Y +Y+ LS A+ ++F M
Sbjct: 115 CATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQG---MKDFMN 171
Query: 64 EKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
E + +L+GS +Y YED +GD MLVGDVPW+
Sbjct: 172 ESKLIDLLNGS-DYVPTYEDKDGDWMLVGDVPWE 204
>AT1G04250.1 | Symbols: AXR3, IAA17 | AXR3 (AUXIN RESISTANT 3);
transcription factor | chr1:1136382-1138340 FORWARD
Length = 229
Score = 68.9 bits (167), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 9 FVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAIT 68
FVK++MDG P RK+DL+ Y SY++LS A+ +F + G++ E K +
Sbjct: 112 FVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEE-GMIDFMNERKLMD 170
Query: 69 GVLDGSGEYTLVYEDNEGDRMLVGDVPW 96
L S +Y YED +GD MLVGDVPW
Sbjct: 171 --LVNSWDYVPSYEDKDGDWMLVGDVPW 196
>AT3G62100.1 | Symbols: IAA30 | IAA30 (INDOLE-3-ACETIC ACID
INDUCIBLE 30); transcription factor |
chr3:22995835-22996593 FORWARD
Length = 172
Score = 65.5 bits (158), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 17/95 (17%)
Query: 3 NCKKGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQE 62
N +VK+NM+GVPIGRK+DL + + Y L T +D +F I+ +E
Sbjct: 78 NSVGSFYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFN-----------ASILWAEE 126
Query: 63 EEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
E+ + L Y D EGD M+VGDVPW+
Sbjct: 127 EDMC------SEKSHVLTYADKEGDWMMVGDVPWE 155
>AT1G80390.1 | Symbols: IAA15 | IAA15 (INDOLE-3-ACETIC ACID
INDUCIBLE 15); transcription factor |
chr1:30221780-30222702 REVERSE
Length = 179
Score = 64.3 bits (155), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 17/88 (19%)
Query: 9 FVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAIT 68
+VK+ +DG RKVDL YD Y +L TA++ +F+G++ R +
Sbjct: 88 YVKVALDGAAYLRKVDLGMYDCYGQLFTALENMFQGIITICRVTE--------------- 132
Query: 69 GVLDGSGEYTLVYEDNEGDRMLVGDVPW 96
L+ GE+ YED +GD MLVGDVPW
Sbjct: 133 --LERKGEFVATYEDKDGDLMLVGDVPW 158
>AT1G52830.1 | Symbols: IAA6, SHY1 | IAA6 (INDOLE-3-ACETIC ACID 6);
transcription factor | chr1:19672670-19673559 REVERSE
Length = 189
Score = 63.2 bits (152), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 19/89 (21%)
Query: 9 FVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAIT 68
+VK++MDGVP RK+DL + +SY L T ++ LF L GI +E +K
Sbjct: 95 YVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCL----------GIGVAKEGKKC-- 142
Query: 69 GVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
EY ++YED + D MLVGDVPWQ
Sbjct: 143 -------EYIIIYEDKDRDWMLVGDVPWQ 164
>AT2G46990.1 | Symbols: IAA20 | IAA20 (INDOLE-3-ACETIC ACID
INDUCIBLE 20); transcription factor |
chr2:19307861-19308869 FORWARD
Length = 175
Score = 62.8 bits (151), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 17/95 (17%)
Query: 3 NCKKGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQE 62
N +VK+NM+GVPIGRK+DL + + Y L +D +F I+ +E
Sbjct: 80 NSVGSFYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFN-----------ASILWAEE 128
Query: 63 EEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
E+ + + L Y D EGD M+VGDVPW+
Sbjct: 129 ED------MCNEKSHVLTYADKEGDWMMVGDVPWE 157
>AT3G15540.1 | Symbols: IAA19, MSG2 | IAA19 (INDOLE-3-ACETIC ACID
INDUCIBLE 19); transcription factor |
chr3:5264100-5265378 FORWARD
Length = 197
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 22/90 (24%)
Query: 9 FVKINMDGVPIGRKVDLKAYDSYEKLSTAVDEL--FRGLLAAQRDSSAGGIMSKQEEEKA 66
+VK++MDGVP RK+DL + Y+ L+ A+D+L FRG+ A +D
Sbjct: 98 YVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGD------------- 144
Query: 67 ITGVLDGSGEYTLVYEDNEGDRMLVGDVPW 96
+ EY +YED +GD ML GDVPW
Sbjct: 145 -------NCEYVTIYEDKDGDWMLAGDVPW 167
>AT4G14560.1 | Symbols: IAA1, AXR5 | IAA1 (INDOLE-3-ACETIC ACID
INDUCIBLE); protein binding / transcription factor |
chr4:8361182-8361780 FORWARD
Length = 168
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 17/88 (19%)
Query: 9 FVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAIT 68
+VK++MDG P RK+DLK Y +Y +L A++ +F+ + G S++E K
Sbjct: 76 YVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKFTV---------GEYSEREGYK--- 123
Query: 69 GVLDGSGEYTLVYEDNEGDRMLVGDVPW 96
GSG + YED +GD MLVGDVPW
Sbjct: 124 ----GSG-FVPTYEDKDGDWMLVGDVPW 146
>AT3G23030.1 | Symbols: IAA2 | IAA2 (INDOLE-3-ACETIC ACID INDUCIBLE
2); transcription factor | chr3:8181069-8181685 REVERSE
Length = 174
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 17/88 (19%)
Query: 9 FVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAIT 68
+VK++MDG P RK+DLK Y +Y +L A++ +F+ ++ G ++E K
Sbjct: 79 YVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMI---------GEYCEREGYK--- 126
Query: 69 GVLDGSGEYTLVYEDNEGDRMLVGDVPW 96
GSG + YED +GD MLVGDVPW
Sbjct: 127 ----GSG-FVPTYEDKDGDWMLVGDVPW 149
>AT3G17600.1 | Symbols: IAA31 | IAA31 (INDOLE-3-ACETIC ACID
INDUCIBLE 31); transcription factor |
chr3:6020281-6021040 REVERSE
Length = 158
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 23/91 (25%)
Query: 7 GMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELF-RGLLAAQRDSSAGGIMSKQEEEK 65
+FVK+ M+GVPIGRK+DL + YE L + +F ++ RD
Sbjct: 72 SLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDRK------------ 119
Query: 66 AITGVLDGSGEYTLVYEDNEGDRMLVGDVPW 96
+ L YED +GD M+VGD+PW
Sbjct: 120 ----------HHVLTYEDKDGDWMMVGDIPW 140
>AT1G04240.1 | Symbols: SHY2, IAA3 | SHY2 (SHORT HYPOCOTYL 2);
transcription factor | chr1:1128564-1129319 REVERSE
Length = 189
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 21/94 (22%)
Query: 6 KGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAA--QRDSSAGGIMSKQEE 63
+G++VK++MDG P RK+DL Y Y +L A++ +F+ + +RD G
Sbjct: 91 QGIYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVGEYFERDGYKG-------- 142
Query: 64 EKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
++ YED +GD ML+GDVPW+
Sbjct: 143 -----------SDFVPTYEDKDGDWMLIGDVPWE 165
>AT5G43700.1 | Symbols: ATAUX2-11, IAA4 | ATAUX2-11 (AUXIN INDUCIBLE
2-11); DNA binding / transcription factor |
chr5:17550465-17551206 FORWARD
Length = 186
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 21/94 (22%)
Query: 6 KGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAA--QRDSSAGGIMSKQEE 63
+G +VK++MDG P RK+DL Y Y +L +++ +F+ + +R+ G
Sbjct: 87 QGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFEREGYKG-------- 138
Query: 64 EKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
++ YED +GD MLVGDVPW+
Sbjct: 139 -----------SDFVPTYEDKDGDWMLVGDVPWE 161
>AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 636
Score = 55.5 bits (132), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 23/86 (26%)
Query: 11 KINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAITGV 70
K+ M GVP+GR VDL A Y +L +++LF I G
Sbjct: 525 KVQMQGVPVGRAVDLNALKGYNELIDDIEKLFD-----------------------IKGE 561
Query: 71 LDGSGEYTLVYEDNEGDRMLVGDVPW 96
L ++ +V+ D+EGD MLVGD PW
Sbjct: 562 LRSRNQWEIVFTDDEGDMMLVGDDPW 587
>AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 638
Score = 55.5 bits (132), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 23/86 (26%)
Query: 11 KINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAITGV 70
K+ M GVP+GR VDL A Y +L +++LF I G
Sbjct: 527 KVQMQGVPVGRAVDLNALKGYNELIDDIEKLFD-----------------------IKGE 563
Query: 71 LDGSGEYTLVYEDNEGDRMLVGDVPW 96
L ++ +V+ D+EGD MLVGD PW
Sbjct: 564 LRSRNQWEIVFTDDEGDMMLVGDDPW 589
>AT4G32280.1 | Symbols: IAA29 | IAA29 (INDOLE-3-ACETIC ACID
INDUCIBLE 29); transcription factor |
chr4:15583479-15584628 FORWARD
Length = 251
Score = 54.3 bits (129), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 22/90 (24%)
Query: 8 MFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAI 67
M+VK+ MDGV I RKVD+K ++SYE L+ ++ +F R+ +
Sbjct: 160 MYVKVKMDGVAIARKVDIKLFNSYESLTNSLITMFTEYEDCDREDT-------------- 205
Query: 68 TGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
YT ++ EGD +L GDV W+
Sbjct: 206 --------NYTFTFQGKEGDWLLRGDVTWK 227
>AT1G04550.1 | Symbols: IAA12, BDL | IAA12 (AUXIN-INDUCED PROTEIN
12); transcription factor/ transcription repressor |
chr1:1240582-1241375 FORWARD
Length = 173
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 31/37 (83%)
Query: 9 FVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGL 45
FVK+NMDGV IGRKVD++A+ SYE L+ ++E+F G+
Sbjct: 126 FVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGM 162
>AT2G46530.2 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105511-19108029 FORWARD
Length = 514
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 23/87 (26%)
Query: 10 VKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAITG 69
+K+ M G +GR VDL SY++L ++++F I G
Sbjct: 406 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFE-----------------------IEG 442
Query: 70 VLDGSGEYTLVYEDNEGDRMLVGDVPW 96
L ++ +V+ D+EGDRMLVGD PW
Sbjct: 443 ELSPKDKWAIVFTDDEGDRMLVGDDPW 469
>AT2G46530.3 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19105112-19108029 FORWARD
Length = 622
Score = 53.5 bits (127), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 23/87 (26%)
Query: 10 VKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAITG 69
+K+ M G +GR VDL SY++L ++++F I G
Sbjct: 514 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFE-----------------------IEG 550
Query: 70 VLDGSGEYTLVYEDNEGDRMLVGDVPW 96
L ++ +V+ D+EGDRMLVGD PW
Sbjct: 551 ELSPKDKWAIVFTDDEGDRMLVGDDPW 577
>AT2G46530.1 | Symbols: ARF11 | ARF11 (AUXIN RESPONSE FACTOR 11);
transcription factor | chr2:19104993-19108029 FORWARD
Length = 601
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 23/87 (26%)
Query: 10 VKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAITG 69
+K+ M G +GR VDL SY++L ++++F I G
Sbjct: 493 IKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFE-----------------------IEG 529
Query: 70 VLDGSGEYTLVYEDNEGDRMLVGDVPW 96
L ++ +V+ D+EGDRMLVGD PW
Sbjct: 530 ELSPKDKWAIVFTDDEGDRMLVGDDPW 556
>AT1G15580.1 | Symbols: IAA5, ATAUX2-27, AUX2-27 | IAA5
(INDOLE-3-ACETIC ACID INDUCIBLE 5); transcription factor
| chr1:5365764-5366460 REVERSE
Length = 163
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 20/92 (21%)
Query: 6 KGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEK 65
K +VK+++DG RK+DL+ Y Y+ L++A+ LF G ++ + K
Sbjct: 73 KSSYVKVSVDGAAFLRKIDLEMYKCYQDLASALQILF------------GCYINFDDTLK 120
Query: 66 AITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
E +YED +GD ML GDVPW+
Sbjct: 121 --------ESECVPIYEDKDGDWMLAGDVPWE 144
>AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 859
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 28/90 (31%)
Query: 11 KINMDGVPIGRKVDLKAYDSYEKLSTAVDELFR---GLLAAQRDSSAGGIMSKQEEEKAI 67
K++ G+ +GR VDL + +YE+L +D LF L+A ++D
Sbjct: 737 KVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKD---------------- 780
Query: 68 TGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+ +VY D E D MLVGD PWQ
Sbjct: 781 ---------WLIVYTDEENDMMLVGDDPWQ 801
>AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 859
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 28/90 (31%)
Query: 11 KINMDGVPIGRKVDLKAYDSYEKLSTAVDELFR---GLLAAQRDSSAGGIMSKQEEEKAI 67
K++ G+ +GR VDL + +YE+L +D LF L+A ++D
Sbjct: 737 KVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKD---------------- 780
Query: 68 TGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+ +VY D E D MLVGD PWQ
Sbjct: 781 ---------WLIVYTDEENDMMLVGDDPWQ 801
>AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 859
Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 28/90 (31%)
Query: 11 KINMDGVPIGRKVDLKAYDSYEKLSTAVDELFR---GLLAAQRDSSAGGIMSKQEEEKAI 67
K++ G+ +GR VDL + +YE+L +D LF L+A ++D
Sbjct: 737 KVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKD---------------- 780
Query: 68 TGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
+ +VY D E D MLVGD PWQ
Sbjct: 781 ---------WLIVYTDEENDMMLVGDDPWQ 801
>AT3G61830.1 | Symbols: ARF18 | ARF18 (AUXIN RESPONSE FACTOR 18);
transcription factor | chr3:22888171-22891179 FORWARD
Length = 602
Score = 50.1 bits (118), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 23/86 (26%)
Query: 11 KINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAITGV 70
K+ M G+ +GR VDL SY++L ++E+F I G
Sbjct: 493 KVQMQGIAVGRAVDLTLLKSYDELIDELEEMFE-----------------------IQGQ 529
Query: 71 LDGSGEYTLVYEDNEGDRMLVGDVPW 96
L ++ +V+ D+EGD ML GD PW
Sbjct: 530 LLARDKWIVVFTDDEGDMMLAGDDPW 555
>AT1G34310.1 | Symbols: ARF12 | ARF12 (AUXIN RESPONSE FACTOR 12);
transcription factor | chr1:12508548-12511520 REVERSE
Length = 593
Score = 47.8 bits (112), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 23/86 (26%)
Query: 11 KINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAITGV 70
K+ M GV IGR VDL + Y++L +++LF I G
Sbjct: 515 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD-----------------------IKGQ 551
Query: 71 LDGSGEYTLVYEDNEGDRMLVGDVPW 96
L ++ + + D++ D+MLVGD PW
Sbjct: 552 LQTRNQWEIAFTDSDEDKMLVGDDPW 577
>AT1G35540.1 | Symbols: ARF14 | ARF14 (AUXIN RESPONSE FACTOR 14);
transcription factor | chr1:13108634-13111700 FORWARD
Length = 605
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 23/86 (26%)
Query: 11 KINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAITGV 70
K+ M GV IGR VDL + Y++L +++LF + G
Sbjct: 514 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD-----------------------LKGQ 550
Query: 71 LDGSGEYTLVYEDNEGDRMLVGDVPW 96
L ++ + + +NE D+MLVG+ PW
Sbjct: 551 LQARNQWEIAFTNNEEDKMLVGEDPW 576
>AT2G01200.2 | Symbols: IAA32 | IAA32 (INDOLE-3-ACETIC ACID
INDUCIBLE 32); transcription factor | chr2:118385-119219
FORWARD
Length = 191
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 18/96 (18%)
Query: 2 ENCKKGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQ 61
E+ K +VK+N+DG+ +GRKV L +Y L+ ++++F G+ + G+ Q
Sbjct: 93 ESRGKYAYVKVNLDGLVVGRKVCLVDQGAYATLALQLNDMF-GM------QTVSGLRLFQ 145
Query: 62 EEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWQ 97
E E++LVY D EG VGDVPW+
Sbjct: 146 TES-----------EFSLVYRDREGIWRNVGDVPWK 170
>AT1G34410.1 | Symbols: ARF21 | ARF21 (AUXIN RESPONSE FACTOR 21);
transcription factor | chr1:12577722-12580824 FORWARD
Length = 606
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 23/86 (26%)
Query: 11 KINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEEKAITGV 70
K+ M GV IGR VDL + Y++L +++LF I G
Sbjct: 515 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD-----------------------IKGQ 551
Query: 71 LDGSGEYTLVYEDNEGDRMLVGDVPW 96
L ++ + + D++G MLVGD PW
Sbjct: 552 LQTRNQWKIAFTDSDGYEMLVGDDPW 577
>AT1G15050.1 | Symbols: IAA34 | IAA34 (INDOLE-3-ACETIC ACID
INDUCIBLE 34); transcription factor |
chr1:5182256-5183243 REVERSE
Length = 185
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 18/92 (19%)
Query: 5 KKGMFVKINMDGVPIGRKVDLKAYDSYEKLSTAVDELFRGLLAAQRDSSAGGIMSKQEEE 64
+K +VK+ MDG+ +GRKV + + SY L+ ++++F G+ S G+ Q E
Sbjct: 90 RKWGYVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMF-GM------QSVSGLRLFQME- 141
Query: 65 KAITGVLDGSGEYTLVYEDNEGDRMLVGDVPW 96
E+ LVY D EG GDVPW
Sbjct: 142 ----------SEFCLVYRDEEGLWRNAGDVPW 163