Jatropha Genome Database
- JcCB0539181.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0539181.10 - phase: 0
(107 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G60860.1 | Symbols: AtRABA1f | AtRABA1f (Arabidopsis Rab GTPa... 152 4e-38
AT3G15060.1 | Symbols: AtRABA1g | AtRABA1g (Arabidopsis Rab GTPa... 150 2e-37
AT4G18430.1 | Symbols: AtRABA1e | AtRABA1e (Arabidopsis Rab GTPa... 149 3e-37
AT5G45750.1 | Symbols: AtRABA1c | AtRABA1c (Arabidopsis Rab GTPa... 148 7e-37
AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D | ATRABA1D (A... 147 1e-36
AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A | ... 140 2e-34
AT2G33870.1 | Symbols: ArRABA1h | ArRABA1h (Arabidopsis Rab GTPa... 139 3e-34
AT1G16920.1 | Symbols: RAB11, ATRABA1B | ATRABA1B (ARABIDOPSIS R... 139 3e-34
AT1G28550.1 | Symbols: AtRABA1i | AtRABA1i (Arabidopsis Rab GTPa... 139 3e-34
AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 | ARA-2; ... 135 5e-33
AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D | ATRABA2D (HOARABIDO... 135 7e-33
AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B | ATRABA2B (... 134 1e-32
AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C | ... 132 4e-32
AT1G73640.1 | Symbols: AtRABA6a | AtRABA6a (Arabidopsis Rab GTPa... 112 7e-26
AT5G47960.1 | Symbols: SMG1, ATRABA4C | ATRABA4C; GTP binding | ... 111 1e-25
AT1G18200.1 | Symbols: AtRABA6b | AtRABA6b (Arabidopsis Rab GTPa... 110 2e-25
AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3 | ATRABA3 (ARABIDOPSIS ... 108 7e-25
AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RABA4D (RAB GTPASE HOM... 106 4e-24
AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RABA4... 105 5e-24
AT5G65270.1 | Symbols: AtRABA4a | AtRABA4a (Arabidopsis Rab GTPa... 104 9e-24
AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |... 104 1e-23
AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | ... 103 2e-23
AT5G47520.1 | Symbols: AtRABA5a | AtRABA5a (Arabidopsis Rab GTPa... 102 4e-23
AT2G31680.1 | Symbols: AtRABA5d | AtRABA5d (Arabidopsis Rab GTPa... 102 6e-23
AT3G07410.1 | Symbols: AtRABA5b | AtRABA5b (Arabidopsis Rab GTPa... 99 5e-22
AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A | ... 86 7e-18
AT5G59840.1 | Symbols: | Ras-related GTP-binding family protein... 85 8e-18
AT3G46060.3 | Symbols: ARA3 | ATRAB8A; GTP binding | chr3:169179... 85 8e-18
AT3G46060.2 | Symbols: ARA3 | ATRAB8A; GTP binding | chr3:169179... 85 8e-18
AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A | ATRAB8A;... 85 8e-18
AT3G53610.3 | Symbols: ATRAB8 | ATRAB8; GTP binding | chr3:19876... 85 1e-17
AT3G53610.2 | Symbols: ATRAB8 | ATRAB8; GTP binding | chr3:19876... 85 1e-17
AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a | ATRAB8; GTP b... 85 1e-17
AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A | ATRAB1A; GTP binding ... 84 2e-17
AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | ATRAB1C; GTP b... 84 2e-17
AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D | A... 82 6e-17
AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E | ATRABE1E (ARABIDOPSIS... 82 7e-17
AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | ATFP8; GTP bindin... 81 1e-16
AT1G43890.3 | Symbols: ATRAB18, RAB18-1, RABC1 | ATRAB18 (ARABID... 80 3e-16
AT1G43890.2 | Symbols: ATRAB18, RAB18-1, RABC1 | ATRAB18 (ARABID... 80 3e-16
AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 80 3e-16
AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RABG3B; G... 80 3e-16
AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C | ATGB2 (GTP-BIN... 78 1e-15
AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C... 77 2e-15
AT2G21880.1 | Symbols: ATRAB7A, ATRABG2 | ATRAB7A; GTP binding |... 77 2e-15
AT1G52280.1 | Symbols: AtRABG3d | AtRABG3d (Arabidopsis Rab GTPa... 76 3e-15
AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D | ATRABG3C (ARABIDOPSIS... 76 4e-15
AT4G09720.1 | Symbols: ATRABG3A | Ras-related GTP-binding protei... 76 4e-15
AT4G09720.3 | Symbols: ATRABG3A | Ras-related GTP-binding protei... 76 4e-15
AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A | ATRABB1A (ARABIDOPSIS... 75 8e-15
AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |... 71 1e-13
AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB GT... 71 1e-13
AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB GT... 71 1e-13
AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B, A... 70 2e-13
AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | ARA6; GTP... 70 2e-13
AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1, A... 70 3e-13
AT3G54840.2 | Symbols: ARA6, RABF1 | ARA6; GTP binding / GTPase ... 70 3e-13
AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A, R... 70 3e-13
AT4G39890.1 | Symbols: AtRABH1c | AtRABH1c (Arabidopsis Rab GTPa... 68 1e-12
AT5G10260.1 | Symbols: AtRABH1e | AtRABH1e (Arabidopsis Rab GTPa... 67 2e-12
AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6 | AT... 67 3e-12
AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | RAB6A; G... 66 4e-12
AT5G39620.1 | Symbols: AtRABG1 | AtRABG1 (Arabidopsis Rab GTPase... 64 2e-11
AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B | ATRABC2B (ARABIDOPSI... 60 2e-10
AT5G64990.1 | Symbols: AtRABH1a | AtRABH1a (Arabidopsis Rab GTPa... 60 4e-10
AT2G21880.2 | Symbols: ATRAB7A, ATRABG2 | ATRAB7A; GTP binding |... 57 3e-09
AT5G55080.1 | Symbols: AtRAN4 | AtRAN4 (Ras-related nuclear prot... 51 2e-07
AT5G20020.1 | Symbols: RAN2 | RAN2; GTP binding / GTPase/ protei... 49 8e-07
AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN3 (RAN GTPASE 3); GTP b... 49 9e-07
AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAN-1; GTP binding ... 49 9e-07
AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | ARAC9; GTP binding ... 47 2e-06
AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6 | ARAC3 (ARAB... 47 3e-06
AT4G09720.2 | Symbols: ATRABG3A | Ras-related GTP-binding protei... 47 3e-06
AT4G07524.1 | Symbols: | GTP-binding protein, putative | chr4:4... 46 5e-06
AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | ARAC5 (RAC-L... 46 5e-06
AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | ROP2 (RHO-R... 46 5e-06
AT5G45970.1 | Symbols: ARAC2, ROP7, ATRAC2, ATROP7 | ARAC2 (ARAB... 46 5e-06
AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9 ... 46 6e-06
AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC... 45 1e-05
AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | ARAC... 45 1e-05
>AT5G60860.1 | Symbols: AtRABA1f | AtRABA1f (Arabidopsis Rab
GTPase homolog A1f); GTP binding |
chr5:24484750-24485565 FORWARD
Length = 217
Score = 152 bits (384), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 74/95 (77%), Positives = 82/95 (86%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK 60
M AYRADD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSIHVDDK
Sbjct: 1 MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60
Query: 61 VVKAQIWDTAGQERYNFYFNFKFQTDLFQILLYGV 95
+VKAQIWDTAGQERY + ++ + +L+Y V
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDV 95
>AT3G15060.1 | Symbols: AtRABA1g | AtRABA1g (Arabidopsis Rab
GTPase homolog A1g); GTP binding | chr3:5069239-5070025
FORWARD
Length = 217
Score = 150 bits (378), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/96 (75%), Positives = 82/96 (85%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK 60
M AYRADDDYD+L+KVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRSIHVD+K
Sbjct: 1 MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60
Query: 61 VVKAQIWDTAGQERYNFYFNFKFQTDLFQILLYGVC 96
+VKAQIWDTAGQERY + ++ + +L+Y V
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT 96
>AT4G18430.1 | Symbols: AtRABA1e | AtRABA1e (Arabidopsis Rab
GTPase homolog A1e); GTP binding |
chr4:10183903-10185223 REVERSE
Length = 217
Score = 149 bits (377), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 69/96 (71%), Positives = 83/96 (86%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK 60
MGAYRADDDYDYLFK+VLIGDSGVGKSNLLSRFTRNEF +ESKSTIGVEFATRS+HVD+K
Sbjct: 1 MGAYRADDDYDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEK 60
Query: 61 VVKAQIWDTAGQERYNFYFNFKFQTDLFQILLYGVC 96
++KAQ+WDTAGQERY + ++ + +L+Y +
Sbjct: 61 IIKAQLWDTAGQERYRAITSAYYRGAVGALLVYDIT 96
>AT5G45750.1 | Symbols: AtRABA1c | AtRABA1c (Arabidopsis Rab GTPase
homolog A1c); GTP binding | chr5:18559318-18560639
FORWARD
Length = 216
Score = 148 bits (373), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 83/100 (83%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK 60
M YRADD+YDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATRS++VDDK
Sbjct: 1 MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60
Query: 61 VVKAQIWDTAGQERYNFYFNFKFQTDLFQILLYGVCFCST 100
V+KAQIWDTAGQERY + ++ + +L+Y V ST
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHST 100
>AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D | ATRABA1D
(ARABIDOPSIS RAB GTPASE HOMOLOG A1D); GTP binding |
chr4:10320156-10321339 REVERSE
Length = 214
Score = 147 bits (371), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 83/100 (83%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK 60
M YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATRS++V++K
Sbjct: 1 MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60
Query: 61 VVKAQIWDTAGQERYNFYFNFKFQTDLFQILLYGVCFCST 100
V+KAQIWDTAGQERY + ++ + +L+Y V ST
Sbjct: 61 VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHST 100
>AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A |
ATRAB11C (ARABIDOPSIS RAB GTPASE 11C); GTP binding |
chr1:3118350-3119571 REVERSE
Length = 217
Score = 140 bits (352), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 79/98 (80%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVV 62
A R D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATR++ V+ + V
Sbjct: 2 ARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
Query: 63 KAQIWDTAGQERYNFYFNFKFQTDLFQILLYGVCFCST 100
KAQIWDTAGQERY + ++ L +L+Y V +T
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTT 99
>AT2G33870.1 | Symbols: ArRABA1h | ArRABA1h (Arabidopsis Rab
GTPase homolog A1h); GTP binding |
chr2:14337366-14338251 REVERSE
Length = 218
Score = 139 bits (351), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/96 (69%), Positives = 79/96 (82%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK 60
MG Y+A+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+F +S+STIGVEFATRSI VDDK
Sbjct: 1 MGTYKAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDK 60
Query: 61 VVKAQIWDTAGQERYNFYFNFKFQTDLFQILLYGVC 96
+VKAQIWDTAGQERY + ++ + +L+Y V
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT 96
>AT1G16920.1 | Symbols: RAB11, ATRABA1B | ATRABA1B (ARABIDOPSIS RAB
GTPASE HOMOLOG A1B); GTP binding | chr1:5787489-5789147
REVERSE
Length = 216
Score = 139 bits (350), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/100 (69%), Positives = 80/100 (80%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK 60
M YR +DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFATR++ VD K
Sbjct: 1 MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60
Query: 61 VVKAQIWDTAGQERYNFYFNFKFQTDLFQILLYGVCFCST 100
VVKAQIWDTAGQERY + ++ + +L+Y V +T
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRAT 100
>AT1G28550.1 | Symbols: AtRABA1i | AtRABA1i (Arabidopsis Rab
GTPase homolog A1i); GTP binding |
chr1:10036966-10037698 REVERSE
Length = 218
Score = 139 bits (350), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/95 (70%), Positives = 79/95 (83%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK 60
MGAYRA+DDYDYLFKVVL GDSGVGKSNLLSRFTRN+F +S++TIGVEFATRSI DDK
Sbjct: 1 MGAYRAEDDYDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDK 60
Query: 61 VVKAQIWDTAGQERYNFYFNFKFQTDLFQILLYGV 95
+VKAQIWDTAGQERY + ++ + +L+Y V
Sbjct: 61 IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDV 95
>AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 | ARA-2; GTP
binding | chr1:1951089-1952686 REVERSE
Length = 216
Score = 135 bits (340), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 80/100 (80%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK 60
M YRAD++YDYLFK+VLIGDSGVGKSNLLSRFT+NEF LESKSTIGVEFAT++ V+ K
Sbjct: 1 MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK 60
Query: 61 VVKAQIWDTAGQERYNFYFNFKFQTDLFQILLYGVCFCST 100
VVKAQIWDTAGQERY + ++ + +L+Y V +T
Sbjct: 61 VVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHAT 100
>AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D | ATRABA2D
(HOARABIDOPSIS RAB GTPASE HOMOLOG A2D); GTP binding |
chr5:23876858-23878244 FORWARD
Length = 217
Score = 135 bits (339), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 62/93 (66%), Positives = 77/93 (82%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVV 62
A+R + DYDYLFK+VLIGDSGVGK+N+LSRFTRNEFCLESKSTIGVEFATR++ V+ K V
Sbjct: 2 AHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYNFYFNFKFQTDLFQILLYGV 95
KAQIWDTAGQERY + ++ + +L+Y +
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI 94
>AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B | ATRABA2B
(ARABIDOPSIS RAB GTPASE HOMOLOG A2B); GTP binding /
GTPase/ protein binding | chr1:2276270-2277154 FORWARD
Length = 214
Score = 134 bits (337), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 76/93 (81%)
Query: 3 AYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVV 62
A R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATR++ V+ K V
Sbjct: 2 ANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTV 61
Query: 63 KAQIWDTAGQERYNFYFNFKFQTDLFQILLYGV 95
KAQIWDTAGQERY + ++ + +L+Y +
Sbjct: 62 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI 94
>AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C |
ATRABA2C (ARABIDOPSIS RAB GTPASE HOMOLOG A2C); GTP
binding | chr3:17246699-17248362 REVERSE
Length = 217
Score = 132 bits (333), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 75/92 (81%)
Query: 4 YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVK 63
+R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATR+ V+ K +K
Sbjct: 3 HRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIK 62
Query: 64 AQIWDTAGQERYNFYFNFKFQTDLFQILLYGV 95
AQIWDTAGQERY + ++ + +L+Y +
Sbjct: 63 AQIWDTAGQERYRAITSAYYRGAVGALLVYDI 94
>AT1G73640.1 | Symbols: AtRABA6a | AtRABA6a (Arabidopsis Rab GTPase
homolog A6a); GTP binding | chr1:27687033-27687987
FORWARD
Length = 233
Score = 112 bits (279), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 72/94 (76%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQI 66
+++ DYLFK VLIGDS VGKSNLLSRF+++EF +SK TIGVEFA R++HV DK++KAQI
Sbjct: 7 EEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQI 66
Query: 67 WDTAGQERYNFYFNFKFQTDLFQILLYGVCFCST 100
WDTAGQER+ + ++ L +L+Y + +T
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDITRRTT 100
>AT5G47960.1 | Symbols: SMG1, ATRABA4C | ATRABA4C; GTP binding |
chr5:19421533-19422473 REVERSE
Length = 223
Score = 111 bits (277), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 68/90 (75%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQI 66
+ DY+FKVVLIGDS VGKS LL+RF+RNEF +ESK+TIGVEF TR++ +D K +KAQI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQI 68
Query: 67 WDTAGQERYNFYFNFKFQTDLFQILLYGVC 96
WDTAGQERY + ++ + +L+Y +
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDIT 98
>AT1G18200.1 | Symbols: AtRABA6b | AtRABA6b (Arabidopsis Rab
GTPase homolog A6b); GTP binding / GTPase/ protein
binding | chr1:6265416-6266659 REVERSE
Length = 229
Score = 110 bits (275), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 69/89 (77%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQI 66
D++ DYLFK VLIGDS VGKSNLLSRF+R+EF L+SK TIGV+FA R++ V DK +KAQI
Sbjct: 7 DEECDYLFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQI 66
Query: 67 WDTAGQERYNFYFNFKFQTDLFQILLYGV 95
WDTAGQER+ + ++ L +L+Y +
Sbjct: 67 WDTAGQERFRAITSSYYRGALGALLIYDI 95
>AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3 | ATRABA3 (ARABIDOPSIS RAB
GTPASE HOMOLOG A3); GTP binding | chr1:86715-88145
REVERSE
Length = 237
Score = 108 bits (270), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIW 67
+ DY+FKVV+IGDS VGK+ LLSRFT NEFC +SKSTIGVEF TR+I + K+VKAQIW
Sbjct: 23 EKIDYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIW 82
Query: 68 DTAGQERYNFYFNFKFQTDLFQILLYGV 95
DTAGQERY + ++ L +++Y +
Sbjct: 83 DTAGQERYRAVTSAYYRGALGAMVVYDI 110
>AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RABA4D (RAB GTPASE
HOMOLOG A4D); GTP binding | chr3:3879495-3880437
REVERSE
Length = 222
Score = 106 bits (264), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 66/83 (79%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 70
DY+FKVVLIGDS VGK+ LL+RF RNEF ++SK+TIGVEF T+++ +D+K VKAQIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWDTA 72
Query: 71 GQERYNFYFNFKFQTDLFQILLY 93
GQERY + ++ + +L+Y
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVY 95
>AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RABA4B
(RAB GTPASE HOMOLOG A4B); GTP binding |
chr4:18542722-18543779 FORWARD
Length = 224
Score = 105 bits (263), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 65/83 (78%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 70
DY+FKVVLIGDS VGKS LL+RF R+EF ++SK+TIGVEF TR++ ++ K +KAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTA 74
Query: 71 GQERYNFYFNFKFQTDLFQILLY 93
GQERY + ++ + +L+Y
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVY 97
>AT5G65270.1 | Symbols: AtRABA4a | AtRABA4a (Arabidopsis Rab GTPase
homolog A4a); GTP binding | chr5:26083437-26084550
FORWARD
Length = 226
Score = 104 bits (260), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 66/86 (76%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 70
DY+FKVVLIGDS VGKS +L+R+ R+EF L+SK+TIGVEF TR++ +D K VKAQIWDTA
Sbjct: 15 DYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTA 74
Query: 71 GQERYNFYFNFKFQTDLFQILLYGVC 96
GQERY + ++ + +L+Y +
Sbjct: 75 GQERYRAVTSAYYRGAVGAMLVYDIT 100
>AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |
ARA4; GTP binding / GTPase/ protein binding |
chr2:17929899-17930904 REVERSE
Length = 214
Score = 104 bits (259), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 71/98 (72%), Gaps = 3/98 (3%)
Query: 6 ADDDY---DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVV 62
+DDD +YLFK+V+IGDS VGKSNLL+R+ RNEF SK+TIGVEF T+S+ +D K V
Sbjct: 2 SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61
Query: 63 KAQIWDTAGQERYNFYFNFKFQTDLFQILLYGVCFCST 100
KAQIWDTAGQER+ + ++ + +++Y + ST
Sbjct: 62 KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSST 99
>AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E |
RABA5E (RAB GTPASE HOMOLOG A5E); GTP binding |
chr1:1748314-1749350 FORWARD
Length = 261
Score = 103 bits (258), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 72/100 (72%), Gaps = 2/100 (2%)
Query: 3 AYRADDD--YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK 60
A +DD+ +YLFK+V+IGDS VGKSNLLSR+ RNEF SK+TIGVEF T+S+ ++ K
Sbjct: 43 AMSSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGK 102
Query: 61 VVKAQIWDTAGQERYNFYFNFKFQTDLFQILLYGVCFCST 100
VKAQIWDTAGQER+ + ++ + +++Y + +T
Sbjct: 103 EVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTT 142
>AT5G47520.1 | Symbols: AtRABA5a | AtRABA5a (Arabidopsis Rab
GTPase homolog A5a); GTP binding |
chr5:19277596-19278366 REVERSE
Length = 221
Score = 102 bits (255), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Query: 1 MGAYRADD-DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDD 59
M Y DD DYLFK+VLIGDS VGKSNLL+RF R+EF SKSTIGVEF T+ + ++
Sbjct: 1 MAFYSEDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDING 60
Query: 60 KVVKAQIWDTAGQERYNFYFNFKFQTDLFQILLYGVC 96
K +KAQIWDTAGQER+ + ++ + +L+Y +
Sbjct: 61 KEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDIS 97
>AT2G31680.1 | Symbols: AtRABA5d | AtRABA5d (Arabidopsis Rab GTPase
homolog A5d); GTP binding | chr2:13473781-13474957
REVERSE
Length = 219
Score = 102 bits (253), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 67/90 (74%)
Query: 11 DYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTA 70
+YLFK+V+IGDS VGKSNLLSR+ RNEF SK+TIGVEF T+++ ++ K VKAQIWDTA
Sbjct: 10 EYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTA 69
Query: 71 GQERYNFYFNFKFQTDLFQILLYGVCFCST 100
GQER+ + ++ + +++Y + ST
Sbjct: 70 GQERFRAVTSAYYRGAVGALVVYDISRRST 99
>AT3G07410.1 | Symbols: AtRABA5b | AtRABA5b (Arabidopsis Rab
GTPase homolog A5b); GTP binding | chr3:2372485-2373482
REVERSE
Length = 217
Score = 99.0 bits (245), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 57/69 (82%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQI 66
D +YLFK+VLIGDS VGKSNLLSRF+R+EF SK+TIGVEF T+ + ++ K VKAQI
Sbjct: 6 DRGEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQI 65
Query: 67 WDTAGQERY 75
WDTAGQER+
Sbjct: 66 WDTAGQERF 74
>AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A |
ARA-5 (ARABIDOPSIS RAS 5); GTP binding |
chr1:400350-401788 REVERSE
Length = 203
Score = 85.5 bits (210), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 64/98 (65%), Gaps = 4/98 (4%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQI 66
+ +YDYLFK++LIGDSGVGKS LL RF+ + + STIGV+F R++ D K +K QI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 67 WDTAGQERYNFYFNFKFQTDLFQILLYGVCFCSTDTES 104
WDTAGQER+ + ++ I++Y V TD ES
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDV----TDEES 95
>AT5G59840.1 | Symbols: | Ras-related GTP-binding family protein
| chr5:24107450-24109049 REVERSE
Length = 216
Score = 85.1 bits (209), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 58/87 (66%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWD 68
DYDYL K++LIGDSGVGKS LL RF+ F +TIG++F R+I +D K +K QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERYNFYFNFKFQTDLFQILLYGV 95
TAGQER+ ++ + +L+Y V
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDV 97
>AT3G46060.3 | Symbols: ARA3 | ATRAB8A; GTP binding |
chr3:16917908-16919740 FORWARD
Length = 216
Score = 85.1 bits (209), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 58/87 (66%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWD 68
DYDYL K++LIGDSGVGKS LL RF+ F +TIG++F R+I +D K +K QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERYNFYFNFKFQTDLFQILLYGV 95
TAGQER+ ++ + +L+Y V
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDV 97
>AT3G46060.2 | Symbols: ARA3 | ATRAB8A; GTP binding |
chr3:16917908-16919740 FORWARD
Length = 216
Score = 85.1 bits (209), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 58/87 (66%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWD 68
DYDYL K++LIGDSGVGKS LL RF+ F +TIG++F R+I +D K +K QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERYNFYFNFKFQTDLFQILLYGV 95
TAGQER+ ++ + +L+Y V
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDV 97
>AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A | ATRAB8A;
GTP binding | chr3:16917908-16919740 FORWARD
Length = 216
Score = 85.1 bits (209), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 58/87 (66%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWD 68
DYDYL K++LIGDSGVGKS LL RF+ F +TIG++F R+I +D K +K QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERYNFYFNFKFQTDLFQILLYGV 95
TAGQER+ ++ + +L+Y V
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDV 97
>AT3G53610.3 | Symbols: ATRAB8 | ATRAB8; GTP binding |
chr3:19876531-19878264 REVERSE
Length = 216
Score = 84.7 bits (208), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 58/87 (66%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWD 68
DYDYL K++LIGDSGVGKS LL RF+ F +TIG++F R+I +D K +K QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERYNFYFNFKFQTDLFQILLYGV 95
TAGQER+ ++ + +L+Y V
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDV 97
>AT3G53610.2 | Symbols: ATRAB8 | ATRAB8; GTP binding |
chr3:19876531-19878264 REVERSE
Length = 216
Score = 84.7 bits (208), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 58/87 (66%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWD 68
DYDYL K++LIGDSGVGKS LL RF+ F +TIG++F R+I +D K +K QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERYNFYFNFKFQTDLFQILLYGV 95
TAGQER+ ++ + +L+Y V
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDV 97
>AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a | ATRAB8; GTP
binding | chr3:19876531-19878264 REVERSE
Length = 216
Score = 84.7 bits (208), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 58/87 (66%)
Query: 9 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWD 68
DYDYL K++LIGDSGVGKS LL RF+ F +TIG++F R+I +D K +K QIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 69 TAGQERYNFYFNFKFQTDLFQILLYGV 95
TAGQER+ ++ + +L+Y V
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDV 97
>AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A | ATRAB1A; GTP binding |
chr5:19167029-19168718 FORWARD
Length = 202
Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 51/69 (73%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQI 66
+ +YDYLFK++LIGDSGVGKS LL RF + + STIGV+F R++ D K +K QI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 67 WDTAGQERY 75
WDTAGQER+
Sbjct: 62 WDTAGQERF 70
>AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | ATRAB1C; GTP
binding | chr4:9773721-9775424 REVERSE
Length = 202
Score = 84.0 bits (206), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 51/69 (73%)
Query: 7 DDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQI 66
+ +YDYLFK++LIGDSGVGKS LL RF + + STIGV+F R++ D K +K QI
Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 67 WDTAGQERY 75
WDTAGQER+
Sbjct: 62 WDTAGQERF 70
>AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D |
ATRAB8C; GTP binding | chr5:883679-885158 FORWARD
Length = 216
Score = 82.0 bits (201), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 62/95 (65%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK 60
+ RA DYDYL K++LIGDSGVGKS LL RF+ + F +TIG++F R++ +D K
Sbjct: 3 VAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGK 62
Query: 61 VVKAQIWDTAGQERYNFYFNFKFQTDLFQILLYGV 95
+K QIWDTAGQER+ ++ + +L+Y V
Sbjct: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDV 97
>AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E | ATRABE1E (ARABIDOPSIS
RAB GTPASE HOMOLOG E1E); GTP binding |
chr3:3034687-3036379 FORWARD
Length = 218
Score = 82.0 bits (201), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 62/95 (65%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK 60
+ RA DYDYL K++LIGDSGVGKS LL RF+ + F +TIG++F R++ +D K
Sbjct: 3 VAPARARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGK 62
Query: 61 VVKAQIWDTAGQERYNFYFNFKFQTDLFQILLYGV 95
+K QIWDTAGQER+ ++ + +L+Y V
Sbjct: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDV 97
>AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | ATFP8; GTP binding
/ GTP-dependent protein binding / myosin XI tail
binding | chr3:3709490-3711397 REVERSE
Length = 205
Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 50/68 (73%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIW 67
++YDYLFK++LIGDS VGKS LL RF + + STIGV+F R+I D K +K QIW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIW 62
Query: 68 DTAGQERY 75
DTAGQER+
Sbjct: 63 DTAGQERF 70
>AT1G43890.3 | Symbols: ATRAB18, RAB18-1, RABC1 | ATRAB18
(ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding |
chr1:16646934-16648395 FORWARD
Length = 212
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK 60
MG+ ++DYLFKV+LIGDSGVGKS+LL FT N F + TIGV+F + + + +K
Sbjct: 1 MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEK 59
Query: 61 VVKAQIWDTAGQERY 75
+K IWDTAGQER+
Sbjct: 60 KLKLAIWDTAGQERF 74
>AT1G43890.2 | Symbols: ATRAB18, RAB18-1, RABC1 | ATRAB18
(ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding |
chr1:16646934-16648395 FORWARD
Length = 212
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK 60
MG+ ++DYLFKV+LIGDSGVGKS+LL FT N F + TIGV+F + + + +K
Sbjct: 1 MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEK 59
Query: 61 VVKAQIWDTAGQERY 75
+K IWDTAGQER+
Sbjct: 60 KLKLAIWDTAGQERF 74
>AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1
| ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP
binding | chr1:16646934-16648395 FORWARD
Length = 212
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK 60
MG+ ++DYLFKV+LIGDSGVGKS+LL FT N F + TIGV+F + + + +K
Sbjct: 1 MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEK 59
Query: 61 VVKAQIWDTAGQERY 75
+K IWDTAGQER+
Sbjct: 60 KLKLAIWDTAGQERF 74
>AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RABG3B;
GTP binding | chr1:8049247-8050494 FORWARD
Length = 203
Score = 79.7 bits (195), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 51/63 (80%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 72
L KV+++GDSGVGK++L++++ N+F + K+TIG +F T+ + +DD++V QIWDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQ 67
Query: 73 ERY 75
ER+
Sbjct: 68 ERF 70
>AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C | ATGB2
(GTP-BINDING 2); GTP binding | chr4:16987118-16988839
REVERSE
Length = 211
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 46/66 (69%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDT 69
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + VD + +K QIWDT
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWDT 62
Query: 70 AGQERY 75
AGQE +
Sbjct: 63 AGQESF 68
>AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C,
ATRAB-B1B, RAB-B1B | RABB1C (ARABIDOPSIS RAB GTPASE
HOMOLOG B1C); GTP binding / GTPase |
chr4:9644908-9646220 REVERSE
Length = 211
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 52/84 (61%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDT 69
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +D+K +K QIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Query: 70 AGQERYNFYFNFKFQTDLFQILLY 93
AGQE + ++ +L+Y
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVY 86
>AT2G21880.1 | Symbols: ATRAB7A, ATRABG2 | ATRAB7A; GTP binding |
chr2:9324899-9326170 REVERSE
Length = 212
Score = 77.0 bits (188), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 50/63 (79%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 72
L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ +H+D+K V QIWDTAGQ
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWDTAGQ 68
Query: 73 ERY 75
ER+
Sbjct: 69 ERF 71
>AT1G52280.1 | Symbols: AtRABG3d | AtRABG3d (Arabidopsis Rab
GTPase homolog G3d); GTP binding |
chr1:19468150-19469449 REVERSE
Length = 206
Score = 76.3 bits (186), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 72
L KV+++GDSGVGK++L+++F +F + K+TIG +F T+ + +DD++ QIWDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWDTAGQ 67
Query: 73 ERY 75
ER+
Sbjct: 68 ERF 70
>AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D | ATRABG3C (ARABIDOPSIS
RAB GTPASE HOMOLOG G3C); GTP binding |
chr3:5459270-5460556 FORWARD
Length = 206
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 49/63 (77%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 72
L KV+++GDSGVGK++L+++F +F + K+TIG +F T+ + +DD++ QIWDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWDTAGQ 67
Query: 73 ERY 75
ER+
Sbjct: 68 ERF 70
>AT4G09720.1 | Symbols: ATRABG3A | Ras-related GTP-binding
protein, putative | chr4:6133101-6134959 FORWARD
Length = 206
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 50/63 (79%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 72
L KV+++GDSGVGK++L++++ +F ++ K+TIG +F T+ + + +K+V QIWDTAGQ
Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQ 67
Query: 73 ERY 75
ER+
Sbjct: 68 ERF 70
>AT4G09720.3 | Symbols: ATRABG3A | Ras-related GTP-binding
protein, putative | chr4:6133101-6134959 FORWARD
Length = 217
Score = 76.3 bits (186), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 50/63 (79%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 72
L KV+++GDSGVGK++L++++ +F ++ K+TIG +F T+ + + +K+V QIWDTAGQ
Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQ 67
Query: 73 ERY 75
ER+
Sbjct: 68 ERF 70
>AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A | ATRABB1A (ARABIDOPSIS
RAB GTPASE HOMOLOG B1A); GTP binding |
chr4:9641980-9643541 REVERSE
Length = 205
Score = 75.1 bits (183), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%)
Query: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDT 69
Y Y FK ++IGD+GVGKS LL +FT F TIGVEF ++I +D+K +K QIWDT
Sbjct: 3 YAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIWDT 62
Query: 70 AGQERYNFYFNFKFQTDLFQILLYGV 95
AGQE + ++ +L+Y +
Sbjct: 63 AGQESFRSVTRSYYRGRAGTLLVYDI 88
>AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |
ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F); GTP
binding | chr3:6484266-6486005 FORWARD
Length = 206
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 48/63 (76%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 72
L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ + +D++ QIWDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 73 ERY 75
ER+
Sbjct: 68 ERF 70
>AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB
GTPASE HOMOLOG G3E); GTP binding |
chr1:18234842-18236968 FORWARD
Length = 206
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 48/63 (76%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 72
L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ + +D++ QIWDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 73 ERY 75
ER+
Sbjct: 68 ERF 70
>AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RABG3E (RAB
GTPASE HOMOLOG G3E); GTP binding |
chr1:18234842-18236968 FORWARD
Length = 206
Score = 71.2 bits (173), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 48/63 (76%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 72
L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ + +D++ QIWDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 73 ERY 75
ER+
Sbjct: 68 ERF 70
>AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B,
ATRAB-F2B, RAB-F2B | ARA7; GTP binding |
chr4:10687441-10689449 REVERSE
Length = 200
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 54/81 (66%)
Query: 15 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQER 74
K+VL+GD G GKS+L+ RF +++F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 75 YNFYFNFKFQTDLFQILLYGV 95
Y+ ++ I+++ V
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDV 92
>AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | ARA6; GTP
binding / GTPase | chr3:20318597-20320782 FORWARD
Length = 202
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK-VVKAQI 66
D + K+VL+GDSGVGKS ++ RF R +F SK T+G F +++I + D VK +I
Sbjct: 28 DAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEI 87
Query: 67 WDTAGQERYNFYFNFKFQTDLFQILLYGV 95
WDTAGQERY+ ++ +++Y +
Sbjct: 88 WDTAGQERYSALAPLYYRGAGVAVIVYDI 116
>AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1,
ATRAB-F2A, RAB-F2A | RHA1 (RAB HOMOLOG 1); GTP binding
| chr5:18244495-18246060 FORWARD
Length = 200
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 47/62 (75%)
Query: 15 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQER 74
K+VL+GD G GKS+L+ RF +++F +STIG F ++++ V+D VK +IWDTAGQER
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 75 YN 76
Y+
Sbjct: 72 YH 73
>AT3G54840.2 | Symbols: ARA6, RABF1 | ARA6; GTP binding / GTPase |
chr3:20318597-20320737 FORWARD
Length = 193
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK-VVKAQI 66
D + K+VL+GDSGVGKS ++ RF R +F SK T+G F +++I + D VK +I
Sbjct: 28 DAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEI 87
Query: 67 WDTAGQERYNFYFNFKFQTDLFQILLYGV 95
WDTAGQERY+ ++ +++Y +
Sbjct: 88 WDTAGQERYSALAPLYYRGAGVAVIVYDI 116
>AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A,
RABC2A | RABC2A (RAB GTPASE HOMOLOG C2A); GTP binding /
GTP-dependent protein binding / myosin XI tail binding
| chr5:885741-887061 REVERSE
Length = 210
Score = 69.7 bits (169), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK 60
MG+ YD FK++LIGDSGVGKS+LL F + + TIGV+F + + V K
Sbjct: 1 MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSV-EDLAPTIGVDFKIKQLTVGGK 59
Query: 61 VVKAQIWDTAGQERYNFYFNFKFQTDLFQILLYGV 95
+K IWDTAGQER+ + ++ IL+Y V
Sbjct: 60 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDV 94
>AT4G39890.1 | Symbols: AtRABH1c | AtRABH1c (Arabidopsis Rab
GTPase homolog H1c); GTP binding / protein binding |
chr4:18506112-18507459 FORWARD
Length = 214
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 55/83 (66%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
FK+V +GD VGK+++++RF ++F + TIG++F +++++++D+ V+ Q+WDTAGQE
Sbjct: 10 FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
Query: 74 RYNFYFNFKFQTDLFQILLYGVC 96
R+ + I++Y V
Sbjct: 70 RFRSLIPSYIRDSSVAIVVYDVS 92
>AT5G10260.1 | Symbols: AtRABH1e | AtRABH1e (Arabidopsis Rab
GTPase homolog H1e); GTP binding | chr5:3219991-3221301
FORWARD
Length = 207
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 56/83 (67%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
+K+V +GD VGK+++++RF ++F ++TIG++F +++++++D+ V+ Q+WDTAGQE
Sbjct: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
Query: 74 RYNFYFNFKFQTDLFQILLYGVC 96
R+ + +++Y V
Sbjct: 70 RFRSLIPSYIRDSSVAVIVYDVA 92
>AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6 |
ATRABH1D (ARABIDOPSIS RAB GTPASE HOMOLOG H1D); GTP
binding | chr2:9466568-9467688 FORWARD
Length = 207
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 56/83 (67%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
+K+V +GD VGK+++++RF ++F ++TIG++F +++++++D+ V+ Q+WDTAGQE
Sbjct: 10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
Query: 74 RYNFYFNFKFQTDLFQILLYGVC 96
R+ + +++Y V
Sbjct: 70 RFRSLIPSYIRDSSVAVVVYDVA 92
>AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | RAB6A;
GTP binding / protein binding | chr2:18411778-18413883
REVERSE
Length = 208
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 56/83 (67%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
+K+V +GD VGK+++++RF ++F ++TIG++F +++++++D+ V+ Q+WDTAGQE
Sbjct: 10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
Query: 74 RYNFYFNFKFQTDLFQILLYGVC 96
R+ + +++Y V
Sbjct: 70 RFRSLIPSYIRDSSVAVIVYDVA 92
>AT5G39620.1 | Symbols: AtRABG1 | AtRABG1 (Arabidopsis Rab GTPase
homolog G1); GTP binding | chr5:15864166-15865782
REVERSE
Length = 204
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
K++L+GDSGVGK++LL R+ +F STI V+ T+ I + ++ V QIWDTAGQE
Sbjct: 6 LKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQE 65
Query: 74 RY 75
R+
Sbjct: 66 RF 67
>AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B | ATRABC2B (ARABIDOPSIS
RAB GTPASE HOMOLOG C2B); ATP binding / GTP binding /
transcription factor binding | chr3:3036864-3038121
REVERSE
Length = 205
Score = 60.1 bits (144), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 1 MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDK 60
MG+ YD FK++LIGDSGVGKS+LL F + + TIGV+F + + V K
Sbjct: 1 MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSV-EDLAPTIGVDFKIKQMKVRGK 59
Query: 61 VVKAQIWDTAGQERYNFYFNFKFQTDLFQILLYGV 95
+K IWDTAGQE++ + F+ IL+Y V
Sbjct: 60 RLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDV 94
>AT5G64990.1 | Symbols: AtRABH1a | AtRABH1a (Arabidopsis Rab
GTPase homolog H1a); GTP binding |
chr5:25963562-25964792 REVERSE
Length = 206
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 45/62 (72%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
+K+V +GD GVGK+++++ F +F ++TIG++F +++ +D+ + Q+WDTAGQE
Sbjct: 8 YKLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWDTAGQE 67
Query: 74 RY 75
R+
Sbjct: 68 RF 69
>AT2G21880.2 | Symbols: ATRAB7A, ATRABG2 | ATRAB7A; GTP binding |
chr2:9324899-9326170 REVERSE
Length = 204
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 44/63 (69%)
Query: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 72
L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ +H+D+K V Q + + G
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQRFQSLGA 68
Query: 73 ERY 75
Y
Sbjct: 69 AFY 71
>AT5G55080.1 | Symbols: AtRAN4 | AtRAN4 (Ras-related nuclear
protein 4); GTP binding / GTPase/ protein binding |
chr5:22351576-22353058 REVERSE
Length = 222
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
FK++++GD G GK+ L R EF ++ T+GV+ + ++ + WDTAGQE
Sbjct: 14 FKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWDTAGQE 73
Query: 74 RYN 76
+Y+
Sbjct: 74 KYS 76
>AT5G20020.1 | Symbols: RAN2 | RAN2; GTP binding / GTPase/ protein
binding | chr5:6762817-6764381 FORWARD
Length = 221
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
FK+V++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 74 RY 75
++
Sbjct: 74 KF 75
>AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN3 (RAN GTPASE 3); GTP
binding / GTPase/ protein binding |
chr5:22392285-22393957 FORWARD
Length = 221
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
FK+V++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 74 RY 75
++
Sbjct: 74 KF 75
>AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAN-1; GTP binding /
GTPase/ protein binding | chr5:6760364-6761747 FORWARD
Length = 221
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
FK+V++GD G GK+ + R EF + + TIGVE + ++ WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 74 RY 75
++
Sbjct: 74 KF 75
>AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | ARAC9; GTP binding |
chr2:18429276-18430636 FORWARD
Length = 209
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
K V +GD VGK+ LL +T N F + T+ F ++ VD K V +WDTAGQE
Sbjct: 19 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-NANVLVDGKTVNLGLWDTAGQE 77
Query: 74 RYN 76
YN
Sbjct: 78 DYN 80
>AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6 | ARAC3
(ARABIDOPSIS RAC-LIKE 3); GTP binding / GTPase |
chr4:16673176-16674540 FORWARD
Length = 198
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
K V +GD VGK+ LL +T N F + T+ F+ I VD + +WDTAGQE
Sbjct: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVI-VDGNTINLGLWDTAGQE 65
Query: 74 RYN 76
YN
Sbjct: 66 DYN 68
>AT4G09720.2 | Symbols: ATRABG3A | Ras-related GTP-binding
protein, putative | chr4:6133405-6134959 FORWARD
Length = 172
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 40 LESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERY 75
++ K+TIG +F T+ + + +K+V QIWDTAGQER+
Sbjct: 1 MQYKATIGADFVTKELQIGEKLVTLQIWDTAGQERF 36
>AT4G07524.1 | Symbols: | GTP-binding protein, putative |
chr4:4345348-4345975 REVERSE
Length = 70
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 37 EFCLESKSTIGVEFATRSIHVDDKVVKAQIWDT 69
EFC ESKSTI +EF TR+I + K+VK QIW++
Sbjct: 2 EFCYESKSTISMEFQTRTITLQGKLVKDQIWES 34
>AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | ARAC5
(RAC-LIKE GTP BINDING PROTEIN 5); GTP binding / GTPase
| chr1:28475964-28477377 FORWARD
Length = 196
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQE
Sbjct: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQE 65
Query: 74 RYN 76
YN
Sbjct: 66 DYN 68
>AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | ROP2
(RHO-RELATED PROTEIN FROM PLANTS 2); GTP binding |
chr1:6967223-6968603 FORWARD
Length = 195
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
K V +GD VGK+ +L +T N F + T+ F+ + VD V +WDTAGQE
Sbjct: 6 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQE 64
Query: 74 RYN 76
YN
Sbjct: 65 DYN 67
>AT5G45970.1 | Symbols: ARAC2, ROP7, ATRAC2, ATROP7 | ARAC2
(ARABIDOPSIS RAC-LIKE 2); GTP binding |
chr5:18643761-18645758 FORWARD
Length = 201
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
K V +GD VGK+ +L +T N F + T+ F+ ++ VD V +WDTAGQE
Sbjct: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQE 65
Query: 74 RYN 76
YN
Sbjct: 66 DYN 68
>AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | ROP9
(RHO-RELATED PROTEIN FROM PLANTS 9); GTP binding |
chr4:14278289-14279705 FORWARD
Length = 209
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
K V +GD VGK+ +L +T N+F + T+ F+ ++ VD ++V +WDTAGQE
Sbjct: 7 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSA-NVAVDGQIVNLGLWDTAGQE 65
Query: 74 RYNFYFNFKFQ-TDLF 88
Y+ ++ D+F
Sbjct: 66 DYSRLRPLSYRGADIF 81
>AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 |
ARAC1; GTP binding | chr2:7740313-7741942 FORWARD
Length = 197
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
K V +GD VGK+ LL +T N F + T+ F+ + V+ V +WDTAGQE
Sbjct: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGATVNLGLWDTAGQE 65
Query: 74 RYN 76
YN
Sbjct: 66 DYN 68
>AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 |
ARAC1; GTP binding | chr2:7740313-7741942 FORWARD
Length = 197
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 14 FKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQE 73
K V +GD VGK+ LL +T N F + T+ F+ + V+ V +WDTAGQE
Sbjct: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGATVNLGLWDTAGQE 65
Query: 74 RYN 76
YN
Sbjct: 66 DYN 68