Jatropha Genome Database
- JcCB0536281.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0536281.10 + phase: 2 /partial
(156 letters)
Database: TAIR9_pep
33,410 sequences; 13,434,913 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G32330.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 159 8e-40
AT4G32330.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 159 8e-40
AT4G32330.2 | Symbols: | FUNCTIONS IN: molecular_function unkno... 158 2e-39
AT2G25480.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 154 2e-38
AT2G35880.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 109 7e-25
AT1G70950.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 100 4e-22
AT3G23090.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 77 4e-15
AT3G04630.1 | Symbols: WDL1 | WDL1 | chr3:1259231-1260652 FORWARD 73 7e-14
AT3G04630.3 | Symbols: WDL1 | WDL1 | chr3:1259231-1260652 FORWARD 73 7e-14
AT3G04630.2 | Symbols: WDL1 | WDL1 | chr3:1259231-1260652 FORWARD 73 7e-14
AT5G28646.2 | Symbols: WVD2 | WVD2 | chr5:10675192-10676151 FORWARD 70 6e-13
AT5G28646.1 | Symbols: WVD2 | WVD2 | chr5:10675192-10676151 FORWARD 70 6e-13
AT1G54460.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 66 1e-11
>AT4G32330.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Targeting for Xklp2
(InterPro:IPR009675); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G25480.1); Has 4728
Blast hits to 3313 proteins in 331 species: Archae - 4;
Bacteria - 347; Metazoa - 2216; Fungi - 461; Plants -
233; Viruses - 22; Other Eukaryotes - 1445 (source: NCBI
BLink). | chr4:15609801-15611867 FORWARD
Length = 437
Score = 159 bits (401), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 94/137 (68%), Gaps = 26/137 (18%)
Query: 15 FKSISFNERQVQASKQSGKSDVASSEGLI-------------------------SPTAED 49
KS SFN R+ Q +KQ GK D A +E SP A+D
Sbjct: 135 LKSKSFNGREAQVTKQ-GKHDSAPAESADGEKVKPKSQKKQAHETSEDDTQSSNSPKADD 193
Query: 50 SKPRRVGALPNYGFSFKCDERAEKRREFYSKLEEKIHAKEVEKNTLQAKSKETQEAEIKM 109
KPR+VGALPNYGFSFKCD+RAEKR+EFY KLEEK HAKE E N++QAKSKETQEAE++M
Sbjct: 194 GKPRKVGALPNYGFSFKCDQRAEKRKEFYVKLEEKTHAKEEEINSMQAKSKETQEAELRM 253
Query: 110 LRKSLNFKATPMPSFYQ 126
LRKSLNFKATPMPSFYQ
Sbjct: 254 LRKSLNFKATPMPSFYQ 270
>AT4G32330.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Targeting for Xklp2
(InterPro:IPR009675); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G25480.1); Has 4728
Blast hits to 3313 proteins in 331 species: Archae - 4;
Bacteria - 347; Metazoa - 2216; Fungi - 461; Plants -
233; Viruses - 22; Other Eukaryotes - 1445 (source: NCBI
BLink). | chr4:15609801-15611867 FORWARD
Length = 437
Score = 159 bits (401), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 94/137 (68%), Gaps = 26/137 (18%)
Query: 15 FKSISFNERQVQASKQSGKSDVASSEGLI-------------------------SPTAED 49
KS SFN R+ Q +KQ GK D A +E SP A+D
Sbjct: 135 LKSKSFNGREAQVTKQ-GKHDSAPAESADGEKVKPKSQKKQAHETSEDDTQSSNSPKADD 193
Query: 50 SKPRRVGALPNYGFSFKCDERAEKRREFYSKLEEKIHAKEVEKNTLQAKSKETQEAEIKM 109
KPR+VGALPNYGFSFKCD+RAEKR+EFY KLEEK HAKE E N++QAKSKETQEAE++M
Sbjct: 194 GKPRKVGALPNYGFSFKCDQRAEKRKEFYVKLEEKTHAKEEEINSMQAKSKETQEAELRM 253
Query: 110 LRKSLNFKATPMPSFYQ 126
LRKSLNFKATPMPSFYQ
Sbjct: 254 LRKSLNFKATPMPSFYQ 270
>AT4G32330.2 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Targeting for Xklp2
(InterPro:IPR009675); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G25480.1); Has 4582
Blast hits to 3307 proteins in 347 species: Archae - 4;
Bacteria - 425; Metazoa - 2127; Fungi - 421; Plants -
244; Viruses - 22; Other Eukaryotes - 1339 (source: NCBI
BLink). | chr4:15609801-15611867 FORWARD
Length = 436
Score = 158 bits (399), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 94/136 (69%), Gaps = 25/136 (18%)
Query: 15 FKSISFNERQVQASKQSGKSDVASSEGLI------------------------SPTAEDS 50
KS SFN R+ Q +KQ GK D A +E +P A+D
Sbjct: 135 LKSKSFNGREAQVTKQ-GKHDSAPAESADGEKVKPKSQKKQAHETSEDDTQSSNPKADDG 193
Query: 51 KPRRVGALPNYGFSFKCDERAEKRREFYSKLEEKIHAKEVEKNTLQAKSKETQEAEIKML 110
KPR+VGALPNYGFSFKCD+RAEKR+EFY KLEEK HAKE E N++QAKSKETQEAE++ML
Sbjct: 194 KPRKVGALPNYGFSFKCDQRAEKRKEFYVKLEEKTHAKEEEINSMQAKSKETQEAELRML 253
Query: 111 RKSLNFKATPMPSFYQ 126
RKSLNFKATPMPSFYQ
Sbjct: 254 RKSLNFKATPMPSFYQ 269
>AT2G25480.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s:
Targeting for Xklp2 (InterPro:IPR009675); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G32330.2); Has 1787 Blast hits to 1426 proteins
in 179 species: Archae - 0; Bacteria - 73; Metazoa -
901; Fungi - 138; Plants - 185; Viruses - 2; Other
Eukaryotes - 488 (source: NCBI BLink). |
chr2:10843449-10845343 FORWARD
Length = 403
Score = 154 bits (389), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 70/82 (85%), Positives = 76/82 (92%)
Query: 45 PTAEDSKPRRVGALPNYGFSFKCDERAEKRREFYSKLEEKIHAKEVEKNTLQAKSKETQE 104
P +D KPRR ALPNYGFSF+CD+RAEKRREFYSKLEEKIHAKE EKNT+QAKSKETQE
Sbjct: 164 PKEDDGKPRRASALPNYGFSFRCDQRAEKRREFYSKLEEKIHAKEEEKNTVQAKSKETQE 223
Query: 105 AEIKMLRKSLNFKATPMPSFYQ 126
AE+KMLRKSLNFKATPMP+FYQ
Sbjct: 224 AELKMLRKSLNFKATPMPTFYQ 245
>AT2G35880.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Targeting for
Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G32330.3);
Has 14997 Blast hits to 8919 proteins in 586 species:
Archae - 10; Bacteria - 1037; Metazoa - 6567; Fungi -
1700; Plants - 594; Viruses - 59; Other Eukaryotes -
5030 (source: NCBI BLink). | chr2:15063204-15065259
REVERSE
Length = 432
Score = 109 bits (273), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 59/74 (79%)
Query: 53 RRVGALPNYGFSFKCDERAEKRREFYSKLEEKIHAKEVEKNTLQAKSKETQEAEIKMLRK 112
RR GFSF+ +ERAEKR+EFY KLEEKIHAKEVEK LQAKSKE+QE EIK LRK
Sbjct: 236 RRSSVGSASGFSFRLEERAEKRKEFYMKLEEKIHAKEVEKTNLQAKSKESQEEEIKRLRK 295
Query: 113 SLNFKATPMPSFYQ 126
SL FKA PMPSFY+
Sbjct: 296 SLTFKAGPMPSFYK 309
>AT1G70950.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: 6
plant structures; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage, D bilateral stage,
E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Targeting for Xklp2 (InterPro:IPR009675); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G23060.1); Has 875 Blast hits to 771 proteins
in 143 species: Archae - 0; Bacteria - 102; Metazoa -
281; Fungi - 65; Plants - 205; Viruses - 3; Other
Eukaryotes - 219 (source: NCBI BLink). |
chr1:26752779-26755242 FORWARD
Length = 478
Score = 100 bits (248), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 53/63 (84%)
Query: 63 FSFKCDERAEKRREFYSKLEEKIHAKEVEKNTLQAKSKETQEAEIKMLRKSLNFKATPMP 122
F FKC ERAEKR+EFY KLEEKIHAK+ E N +QAK+++ EAEIK RKSLNFKATPMP
Sbjct: 328 FRFKCSERAEKRKEFYMKLEEKIHAKKTETNQVQAKTQQKAEAEIKQFRKSLNFKATPMP 387
Query: 123 SFY 125
SFY
Sbjct: 388 SFY 390
>AT3G23090.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: inflorescence
meristem, leaf apex, hypocotyl, flower, root; EXPRESSED
DURING: petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: Targeting for Xklp2
(InterPro:IPR009675); BEST Arabidopsis thaliana protein
match is: WDL1 (TAIR:AT3G04630.3); Has 483 Blast hits to
450 proteins in 87 species: Archae - 2; Bacteria - 15;
Metazoa - 188; Fungi - 17; Plants - 148; Viruses - 0;
Other Eukaryotes - 113 (source: NCBI BLink). |
chr3:8214533-8216983 REVERSE
Length = 338
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 62/104 (59%), Gaps = 5/104 (4%)
Query: 24 QVQASKQSGKSDVASSEGLISPTAEDSKPRRV-GALPNYGFSFKCDERAEKRREFYSKLE 82
Q + K S + D S + A+ +K R V A P SF+ ERAEKR+EFY+KLE
Sbjct: 158 QPKNKKLSDEEDSCSVASYATSGAKSAKSRTVVTAAP----SFRSTERAEKRKEFYTKLE 213
Query: 83 EKIHAKEVEKNTLQAKSKETQEAEIKMLRKSLNFKATPMPSFYQ 126
EK A E EK +A++KE EA ++ LRKSL FKA PMP FY
Sbjct: 214 EKHQAMEAEKTQSEARNKEATEAALRQLRKSLRFKANPMPKFYH 257
>AT3G04630.1 | Symbols: WDL1 | WDL1 | chr3:1259231-1260652 FORWARD
Length = 287
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 61 YGF--SFKCDERAEKRREFYSKLEEKIHAKEVEKNTLQAKSKETQEAEIKMLRKSLNFKA 118
YG +F+ +RAEKR+E+Y KLEEK A E E+N L+ + K+ QEA +K LRK+L FKA
Sbjct: 123 YGSAPTFRSAQRAEKRKEYYQKLEEKNQALEAERNELEQRQKDEQEAALKQLRKNLKFKA 182
Query: 119 TPMPSFY 125
P+P+FY
Sbjct: 183 KPVPNFY 189
>AT3G04630.3 | Symbols: WDL1 | WDL1 | chr3:1259231-1260652 FORWARD
Length = 286
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 61 YGF--SFKCDERAEKRREFYSKLEEKIHAKEVEKNTLQAKSKETQEAEIKMLRKSLNFKA 118
YG +F+ +RAEKR+E+Y KLEEK A E E+N L+ + K+ QEA +K LRK+L FKA
Sbjct: 122 YGSAPTFRSAQRAEKRKEYYQKLEEKNQALEAERNELEQRQKDEQEAALKQLRKNLKFKA 181
Query: 119 TPMPSFY 125
P+P+FY
Sbjct: 182 KPVPNFY 188
>AT3G04630.2 | Symbols: WDL1 | WDL1 | chr3:1259231-1260652 FORWARD
Length = 286
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 61 YGF--SFKCDERAEKRREFYSKLEEKIHAKEVEKNTLQAKSKETQEAEIKMLRKSLNFKA 118
YG +F+ +RAEKR+E+Y KLEEK A E E+N L+ + K+ QEA +K LRK+L FKA
Sbjct: 122 YGSAPTFRSAQRAEKRKEYYQKLEEKNQALEAERNELEQRQKDEQEAALKQLRKNLKFKA 181
Query: 119 TPMPSFY 125
P+P+FY
Sbjct: 182 KPVPNFY 188
>AT5G28646.2 | Symbols: WVD2 | WVD2 | chr5:10675192-10676151 FORWARD
Length = 202
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%)
Query: 65 FKCDERAEKRREFYSKLEEKIHAKEVEKNTLQAKSKETQEAEIKMLRKSLNFKATPMPSF 124
F+ +RAEKR+E+Y KLEEK A E E+ L+ + KE QEA IK LRK+L FKA P+P F
Sbjct: 89 FRSAQRAEKRKEYYQKLEEKHQALEAERIELEQRQKEEQEAAIKQLRKNLKFKANPVPDF 148
Query: 125 Y 125
Y
Sbjct: 149 Y 149
>AT5G28646.1 | Symbols: WVD2 | WVD2 | chr5:10675192-10676151 FORWARD
Length = 202
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%)
Query: 65 FKCDERAEKRREFYSKLEEKIHAKEVEKNTLQAKSKETQEAEIKMLRKSLNFKATPMPSF 124
F+ +RAEKR+E+Y KLEEK A E E+ L+ + KE QEA IK LRK+L FKA P+P F
Sbjct: 89 FRSAQRAEKRKEYYQKLEEKHQALEAERIELEQRQKEEQEAAIKQLRKNLKFKANPVPDF 148
Query: 125 Y 125
Y
Sbjct: 149 Y 149
>AT1G54460.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Targeting for Xklp2
(InterPro:IPR009675); BEST Arabidopsis thaliana protein
match is: WDL1 (TAIR:AT3G04630.3); Has 393 Blast hits to
375 proteins in 76 species: Archae - 0; Bacteria - 3;
Metazoa - 143; Fungi - 38; Plants - 160; Viruses - 0;
Other Eukaryotes - 49 (source: NCBI BLink). |
chr1:20340907-20342900 REVERSE
Length = 338
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 55 VGALPNYGFSFKCDERAEKRREFYSKLEEKIHAKEVEKNTLQAKSKETQEAEIKMLRKSL 114
+G P +F R E+RREFY KLEEK A E EK + + KE QEA K LRK++
Sbjct: 161 IGVAP----TFSSTSRLERRREFYQKLEEKQKALEAEKRENEKRLKEEQEAVTKQLRKNM 216
Query: 115 NFKATPMPSFYQ 126
+KA P+PSFYQ
Sbjct: 217 AYKANPVPSFYQ 228