Jatropha Genome Database

JcCB0535351.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0535351.10 - phase: 1 /pseudo/partial
         (209 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G51340.1 | Symbols:  | MATE efflux family protein | chr1:1903...   254   4e-68
AT1G51340.2 | Symbols:  | MATE efflux family protein | chr1:1903...   253   6e-68
AT3G08040.2 | Symbols: FRD3, MAN1 | FRD3 (FERRIC REDUCTASE DEFEC...   213   7e-56
AT3G08040.1 | Symbols: FRD3, MAN1 | FRD3 (FERRIC REDUCTASE DEFEC...   213   7e-56
AT4G38380.1 | Symbols:  | antiporter/ drug transporter | chr4:17...   143   7e-35
AT2G38330.1 | Symbols:  | MATE efflux family protein | chr2:1606...   142   1e-34

>AT1G51340.1 | Symbols:  | MATE efflux family protein |
           chr1:19032034-19034681 FORWARD
          Length = 509

 Score =  254 bits (648), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 130/192 (67%), Positives = 146/192 (76%)

Query: 18  SGFLLLMRVIAVTFCVTLSASLAARQGSTAMAAFQVCLQVWLATSLLADGLAVAGQAILA 77
           +GFLLLMRVIAVTFCVTLSASLAAR+GST+MAAFQVCLQVWLATSLLADG AVAGQAILA
Sbjct: 305 NGFLLLMRVIAVTFCVTLSASLAAREGSTSMAAFQVCLQVWLATSLLADGYAVAGQAILA 364

Query: 78  TAFAKSDYEKATATASRVXXXXXXXXXXXXXXXXXXXSFGSRLFTSDVNVLRMISIGIPF 137
           +AFAK DY++A ATASRV                    FG+R+FT D  VL +ISIG+PF
Sbjct: 365 SAFAKKDYKRAAATASRVLQLGLVLGFVLAVILGAGLHFGARVFTKDDKVLHLISIGLPF 424

Query: 138 VAGTQPINALAFVFDGVNFGASDFAYSAYSMVLVAXXXXXXXXXXXXTYKFIGIWVALTI 197
           VAGTQPINALAFVFDGVNFGASDF Y+A S+V+VA            T+ FIG+W  LTI
Sbjct: 425 VAGTQPINALAFVFDGVNFGASDFGYAAASLVMVAIVSILCLLFLSSTHGFIGLWFGLTI 484

Query: 198 YMSLRTSAGFWR 209
           YMSLR + GFWR
Sbjct: 485 YMSLRAAVGFWR 496


>AT1G51340.2 | Symbols:  | MATE efflux family protein |
           chr1:19032021-19034681 FORWARD
          Length = 515

 Score =  253 bits (646), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 130/192 (67%), Positives = 146/192 (76%)

Query: 18  SGFLLLMRVIAVTFCVTLSASLAARQGSTAMAAFQVCLQVWLATSLLADGLAVAGQAILA 77
           +GFLLLMRVIAVTFCVTLSASLAAR+GST+MAAFQVCLQVWLATSLLADG AVAGQAILA
Sbjct: 311 NGFLLLMRVIAVTFCVTLSASLAAREGSTSMAAFQVCLQVWLATSLLADGYAVAGQAILA 370

Query: 78  TAFAKSDYEKATATASRVXXXXXXXXXXXXXXXXXXXSFGSRLFTSDVNVLRMISIGIPF 137
           +AFAK DY++A ATASRV                    FG+R+FT D  VL +ISIG+PF
Sbjct: 371 SAFAKKDYKRAAATASRVLQLGLVLGFVLAVILGAGLHFGARVFTKDDKVLHLISIGLPF 430

Query: 138 VAGTQPINALAFVFDGVNFGASDFAYSAYSMVLVAXXXXXXXXXXXXTYKFIGIWVALTI 197
           VAGTQPINALAFVFDGVNFGASDF Y+A S+V+VA            T+ FIG+W  LTI
Sbjct: 431 VAGTQPINALAFVFDGVNFGASDFGYAAASLVMVAIVSILCLLFLSSTHGFIGLWFGLTI 490

Query: 198 YMSLRTSAGFWR 209
           YMSLR + GFWR
Sbjct: 491 YMSLRAAVGFWR 502


>AT3G08040.2 | Symbols: FRD3, MAN1 | FRD3 (FERRIC REDUCTASE
           DEFECTIVE 3); antiporter/ transporter |
           chr3:2566593-2569397 REVERSE
          Length = 526

 Score =  213 bits (542), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 111/192 (57%), Positives = 132/192 (68%)

Query: 18  SGFLLLMRVIAVTFCVTLSASLAARQGSTAMAAFQVCLQVWLATSLLADGLAVAGQAILA 77
           +G LLL R IAVTFC TL+A++AAR G+T MAAFQ+CLQVWL +SLL DGLAVAGQAILA
Sbjct: 315 NGLLLLARTIAVTFCQTLAAAMAARLGTTPMAAFQICLQVWLTSSLLNDGLAVAGQAILA 374

Query: 78  TAFAKSDYEKATATASRVXXXXXXXXXXXXXXXXXXXSFGSRLFTSDVNVLRMISIGIPF 137
            +FA+ DY K TA ASRV                    FG+ +F+ D  V+ +++IGIPF
Sbjct: 375 CSFAEKDYNKVTAVASRVLQMGFVLGLGLSVFVGLGLYFGAGVFSKDPAVIHLMAIGIPF 434

Query: 138 VAGTQPINALAFVFDGVNFGASDFAYSAYSMVLVAXXXXXXXXXXXXTYKFIGIWVALTI 197
           +A TQPIN+LAFV DGVNFGASDFAY+AYSMV VA            T  FIGIW+ALTI
Sbjct: 435 IAATQPINSLAFVLDGVNFGASDFAYTAYSMVGVAAISIAAVIYMAKTNGFIGIWIALTI 494

Query: 198 YMSLRTSAGFWR 209
           YM+LR   G  R
Sbjct: 495 YMALRAITGIAR 506


>AT3G08040.1 | Symbols: FRD3, MAN1 | FRD3 (FERRIC REDUCTASE
           DEFECTIVE 3); antiporter/ transporter |
           chr3:2566593-2569397 REVERSE
          Length = 526

 Score =  213 bits (542), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 111/192 (57%), Positives = 132/192 (68%)

Query: 18  SGFLLLMRVIAVTFCVTLSASLAARQGSTAMAAFQVCLQVWLATSLLADGLAVAGQAILA 77
           +G LLL R IAVTFC TL+A++AAR G+T MAAFQ+CLQVWL +SLL DGLAVAGQAILA
Sbjct: 315 NGLLLLARTIAVTFCQTLAAAMAARLGTTPMAAFQICLQVWLTSSLLNDGLAVAGQAILA 374

Query: 78  TAFAKSDYEKATATASRVXXXXXXXXXXXXXXXXXXXSFGSRLFTSDVNVLRMISIGIPF 137
            +FA+ DY K TA ASRV                    FG+ +F+ D  V+ +++IGIPF
Sbjct: 375 CSFAEKDYNKVTAVASRVLQMGFVLGLGLSVFVGLGLYFGAGVFSKDPAVIHLMAIGIPF 434

Query: 138 VAGTQPINALAFVFDGVNFGASDFAYSAYSMVLVAXXXXXXXXXXXXTYKFIGIWVALTI 197
           +A TQPIN+LAFV DGVNFGASDFAY+AYSMV VA            T  FIGIW+ALTI
Sbjct: 435 IAATQPINSLAFVLDGVNFGASDFAYTAYSMVGVAAISIAAVIYMAKTNGFIGIWIALTI 494

Query: 198 YMSLRTSAGFWR 209
           YM+LR   G  R
Sbjct: 495 YMALRAITGIAR 506


>AT4G38380.1 | Symbols:  | antiporter/ drug transporter |
           chr4:17971855-17974787 REVERSE
          Length = 560

 Score =  143 bits (361), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 112/192 (58%)

Query: 18  SGFLLLMRVIAVTFCVTLSASLAARQGSTAMAAFQVCLQVWLATSLLADGLAVAGQAILA 77
           SG  +L R ++V   +T++ S+AARQG  AMAA Q+C+QVWLA SLL D LA +GQA++A
Sbjct: 350 SGGFVLGRTLSVLVTMTVATSMAARQGVFAMAAHQICMQVWLAVSLLTDALASSGQALIA 409

Query: 78  TAFAKSDYEKATATASRVXXXXXXXXXXXXXXXXXXXSFGSRLFTSDVNVLRMISIGIPF 137
           ++ +K D+E      + V                   S  + LF+ D  VLR++  G+ F
Sbjct: 410 SSASKRDFEGVKEVTTFVLKIGVVTGIALAIVLGMSFSSIAGLFSKDPEVLRIVRKGVLF 469

Query: 138 VAGTQPINALAFVFDGVNFGASDFAYSAYSMVLVAXXXXXXXXXXXXTYKFIGIWVALTI 197
           VA TQPI ALAF+FDG+++G SDF Y+A SM++V                  G+WV L++
Sbjct: 470 VAATQPITALAFIFDGLHYGMSDFPYAACSMMVVGGISSAFMLYAPAGLGLSGVWVGLSM 529

Query: 198 YMSLRTSAGFWR 209
           +M LR  AGF R
Sbjct: 530 FMGLRMVAGFSR 541


>AT2G38330.1 | Symbols:  | MATE efflux family protein |
           chr2:16064571-16067318 FORWARD
          Length = 521

 Score =  142 bits (359), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/192 (41%), Positives = 110/192 (57%)

Query: 18  SGFLLLMRVIAVTFCVTLSASLAARQGSTAMAAFQVCLQVWLATSLLADGLAVAGQAILA 77
           SG LL+ R +A+    TL+ SLAA+ G T MA  Q+ L++WLA SLL D LA+A Q++LA
Sbjct: 311 SGGLLIGRTVALLVPFTLATSLAAQNGPTQMAGHQIVLEIWLAVSLLTDALAIAAQSLLA 370

Query: 78  TAFAKSDYEKATATASRVXXXXXXXXXXXXXXXXXXXSFGSRLFTSDVNVLRMISIGIPF 137
           T +++ +Y++A      V                      S LFT+D  VL++   G  F
Sbjct: 371 TTYSQGEYKQAREVLFGVLQVGLATGTGLAAVLFITFEPFSSLFTTDSEVLKIALSGTLF 430

Query: 138 VAGTQPINALAFVFDGVNFGASDFAYSAYSMVLVAXXXXXXXXXXXXTYKFIGIWVALTI 197
           VAG+QP+NALAFV DG+ +G SDF ++AYSMV+V             T+   GIW  L +
Sbjct: 431 VAGSQPVNALAFVLDGLYYGVSDFGFAAYSMVIVGFISSLFMLVAAPTFGLAGIWTGLFL 490

Query: 198 YMSLRTSAGFWR 209
           +M+LR  AG WR
Sbjct: 491 FMALRLVAGAWR 502