Jatropha Genome Database

JcCB0499981.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0499981.10 + phase: 0 /pseudo/partial
         (151 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G01910.1 | Symbols: SOX, AT-SO, AtSO | SOX (SULFITE OXIDASE);...   125   1e-29
AT3G01910.2 | Symbols: SOX, AT-SO, AtSO | SOX (SULFITE OXIDASE);...   125   1e-29
AT3G01910.3 | Symbols: SOX, AT-SO, AtSO | SOX (SULFITE OXIDASE);...    65   1e-11

>AT3G01910.1 | Symbols: SOX, AT-SO, AtSO | SOX (SULFITE OXIDASE);
           sulfite oxidase | chr3:314919-317274 REVERSE
          Length = 393

 Score =  125 bits (313), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 59/69 (85%), Positives = 64/69 (92%)

Query: 4   GGAKLADVLELVGISKLTSATKSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADV 63
           GGAKLADVLELVGI KLT++T  G +HVEFVS+D+CKEENGGPYKASI LSQATNPEADV
Sbjct: 128 GGAKLADVLELVGIPKLTASTNLGARHVEFVSVDRCKEENGGPYKASITLSQATNPEADV 187

Query: 64  LLAYEMNGE 72
           LLAYEMNGE
Sbjct: 188 LLAYEMNGE 196


>AT3G01910.2 | Symbols: SOX, AT-SO, AtSO | SOX (SULFITE OXIDASE);
           sulfite oxidase | chr3:314919-316641 REVERSE
          Length = 298

 Score =  125 bits (313), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 59/69 (85%), Positives = 64/69 (92%)

Query: 4   GGAKLADVLELVGISKLTSATKSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADV 63
           GGAKLADVLELVGI KLT++T  G +HVEFVS+D+CKEENGGPYKASI LSQATNPEADV
Sbjct: 33  GGAKLADVLELVGIPKLTASTNLGARHVEFVSVDRCKEENGGPYKASITLSQATNPEADV 92

Query: 64  LLAYEMNGE 72
           LLAYEMNGE
Sbjct: 93  LLAYEMNGE 101


>AT3G01910.3 | Symbols: SOX, AT-SO, AtSO | SOX (SULFITE OXIDASE);
          sulfite oxidase | chr3:314919-317053 REVERSE
          Length = 241

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/31 (96%), Positives = 30/31 (96%)

Query: 42 ENGGPYKASIPLSQATNPEADVLLAYEMNGE 72
          ENGGPYKASI LSQATNPEADVLLAYEMNGE
Sbjct: 14 ENGGPYKASITLSQATNPEADVLLAYEMNGE 44