Jatropha Genome Database

JcCB0495231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0495231.10 + phase: 0 /partial
         (220 letters)

Database: TAIR9_pep 
           33,410 sequences; 13,434,913 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G63440.1 | Symbols: HMA5 | HMA5 (HEAVY METAL ATPASE 5); ATPas...   152   1e-37
AT5G44790.1 | Symbols: RAN1, HMA7 | RAN1 (RESPONSIVE-TO-ANTAGONI...   112   1e-25

>AT1G63440.1 | Symbols: HMA5 | HMA5 (HEAVY METAL ATPASE 5); ATPase,
           coupled to transmembrane movement of ions,
           phosphorylative mechanism | chr1:23527655-23531109
           FORWARD
          Length = 995

 Score =  152 bits (384), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 113/174 (64%), Gaps = 4/174 (2%)

Query: 49  FKIGDIKCASCAASIESVLGELSGVEKAMVSPLDGHAAISYIPEFVTAQKIKETIEDAGF 108
           F++  + C++CA S+E  +  L G+  A++  L+  A I + P  V  + I+ETIEDAGF
Sbjct: 55  FQVLGMTCSACAGSVEKAIKRLPGIHDAVIDALNNRAQILFYPNSVDVETIRETIEDAGF 114

Query: 109 PV----DEFPEQEISVCRLRIKGMACTSCSESVERALLMANGVKKAVVGLALEEAKIHFD 164
                 +E  E+   VCR+RI GM CTSCS ++ER L   NGV++A V LA+EEA+IH+D
Sbjct: 115 EASLIENEANERSRQVCRIRINGMTCTSCSSTIERVLQSVNGVQRAHVALAIEEAEIHYD 174

Query: 165 PNLTDTDHIVEAVEDAGFGAEIISSGNDLNKAHLKLEGIKSTEDAAVIRFSLES 218
           P L+  D ++E +E+AGF A +IS+G D++K  LK++G  + E   VI  SLE+
Sbjct: 175 PRLSSYDRLLEEIENAGFEAVLISTGEDVSKIDLKIDGELTDESMKVIERSLEA 228



 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 3/152 (1%)

Query: 33  VPKQKDNRDKKVKTIRFKIGDIKCASCAASIESVLGELSGVEKAMVSPLDGHAAISYIPE 92
           +  + + R ++V   R +I  + C SC+++IE VL  ++GV++A V+     A I Y P 
Sbjct: 119 IENEANERSRQV--CRIRINGMTCTSCSSTIERVLQSVNGVQRAHVALAIEEAEIHYDPR 176

Query: 93  FVTAQKIKETIEDAGFPVDEFPEQE-ISVCRLRIKGMACTSCSESVERALLMANGVKKAV 151
             +  ++ E IE+AGF        E +S   L+I G       + +ER+L    GV+   
Sbjct: 177 LSSYDRLLEEIENAGFEAVLISTGEDVSKIDLKIDGELTDESMKVIERSLEALPGVQSVE 236

Query: 152 VGLALEEAKIHFDPNLTDTDHIVEAVEDAGFG 183
           +    ++  + + P++T   + ++ +E   FG
Sbjct: 237 ISHGTDKISVLYKPDVTGPRNFIQVIESTVFG 268


>AT5G44790.1 | Symbols: RAN1, HMA7 | RAN1 (RESPONSIVE-TO-ANTAGONIST
           1); ATPase, coupled to transmembrane movement of ions,
           phosphorylative mechanism / copper ion transmembrane
           transporter | chr5:18075846-18079817 REVERSE
          Length = 1001

 Score =  112 bits (281), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 109/190 (57%), Gaps = 8/190 (4%)

Query: 27  DDVAIAVPKQKDNRD-KKVKTIRFKIGDIKCASCAASIESVLGELSGVEKAMVSPLDGHA 85
           DD+   + K ++ RD   ++ I+  +  + CA+C+ S+E+ L  ++GV KA V+ L   A
Sbjct: 40  DDI---LTKIEEGRDVSGLRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRA 96

Query: 86  AISYIPEFVTAQKIKETIEDAGFPVDEFPEQEIS---VCRLRIKGMACTSCSESVERALL 142
            + + P  V  + IKE IEDAGF  +   E++     V +  I GM C +C  SVE  L 
Sbjct: 97  DVVFDPNLVKEEDIKEAIEDAGFEAEILAEEQTQATLVGQFTIGGMTCAACVNSVEGILR 156

Query: 143 MANGVKKAVVGLALEEAKIHFDPNLTDTDHIVEAVEDAGFGAEIISSGNDLNKAHLKLEG 202
              GVK+AVV L+    ++ +DPN+ + D IV A+EDAGF   ++ S N  +K  L+++G
Sbjct: 157 DLPGVKRAVVALSTSLGEVEYDPNVINKDDIVNAIEDAGFEGSLVQS-NQQDKLVLRVDG 215

Query: 203 IKSTEDAAVI 212
           I +  DA V+
Sbjct: 216 ILNELDAQVL 225



 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 69/136 (50%)

Query: 48  RFKIGDIKCASCAASIESVLGELSGVEKAMVSPLDGHAAISYIPEFVTAQKIKETIEDAG 107
           +F IG + CA+C  S+E +L +L GV++A+V+       + Y P  +    I   IEDAG
Sbjct: 136 QFTIGGMTCAACVNSVEGILRDLPGVKRAVVALSTSLGEVEYDPNVINKDDIVNAIEDAG 195

Query: 108 FPVDEFPEQEISVCRLRIKGMACTSCSESVERALLMANGVKKAVVGLALEEAKIHFDPNL 167
           F        +     LR+ G+     ++ +E  L   NGV++  +     E ++ FDP +
Sbjct: 196 FEGSLVQSNQQDKLVLRVDGILNELDAQVLEGILTRLNGVRQFRLDRISGELEVVFDPEV 255

Query: 168 TDTDHIVEAVEDAGFG 183
             +  +V+ +E+ GFG
Sbjct: 256 VSSRSLVDGIEEDGFG 271